Lsi08G001750 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G001750
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Glycerophosphodiester phosphodiesterase
Location	chr08: 3614502 .. 3615236 (+)
RNA-Seq Expression	Lsi08G001750
Synteny	Lsi08G001750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACTCCTTACCCTCTGGTGTGGGCAGTCTCTCCCAGTCCGCAGGTGTTGGAGAAAATTTTGATTCAGAAAGTTGCCATCCGAATGGCGATCTCCACCTCTAGACTTGGAAGAAGGCGTTGGATTGGGCAAAGAACATGGCGTAATCGATTCCCCTTCAGATTCTCTTCCCGACGACTCTTTCGTCTCACTATCCTATGCCTCGCTTTGATCGCAATTCTGCCTCCCATTTACTTCCATTTCAAGCTCAAGCGCTTTCAGCAGGTACCTTTTCTTCTTCTCTGCTCTCTTCCCTCTAATTCAATTCCAAAATCACATGATTCTGTTCCTTCTCTGTACAGATGCAACAAAGGGACTGCAAATGGCTGAATGATCCTCCTCTTGTGTGTGCTCATGGGGGCGACTCATCTAAGGCTTTCCCAAACACTGTACGAGTCCTCTTTTCGTCTTCTCCGTCCAAATTCAAATATTGAATCATCTCTCGCCGCTCTTTGTGGCTCTTTACTGGTTATGATTTTTTTCCTCTATTTGCAACAGATGGATGCATATAGCATAGCTCTTCGTTCTCAAGCCAACTGCATTGAAGTTGATGTTTCTCGTTCTTCAGATGGAGTCTTATTTGCACTTCATGACAGGTATTTATCAAAACTGTTTACAGCCAGTCACCTTATCATGTTGGTCCCTAAATCAGTTAATCAGGATAGCCCTTGTCAATTTTCTTCTCGTAATTGA

mRNA sequence

AAAAAAACTCCTTACCCTCTGGTGTGGGCAGTCTCTCCCAGTCCGCAGGTGTTGGAGAAAATTTTGATTCAGAAAGTTGCCATCCGAATGGCGATCTCCACCTCTAGACTTGGAAGAAGGCGTTGGATTGGGCAAAGAACATGGCGTAATCGATTCCCCTTCAGATTCTCTTCCCGACGACTCTTTCGTCTCACTATCCTATGCCTCGCTTTGATCGCAATTCTGCCTCCCATTTACTTCCATTTCAAGCTCAAGCGCTTTCAGCAGATGCAACAAAGGGACTGCAAATGGCTGAATGATCCTCCTCTTGTGTGTGCTCATGGGGGCGACTCATCTAAGGCTTTCCCAAACACTATGGATGCATATAGCATAGCTCTTCGTTCTCAAGCCAACTGCATTGAAGTTGATGTTTCTCGTTCTTCAGATGGAGTCTTATTTGCACTTCATGACAGGTATTTATCAAAACTGTTTACAGCCAGTCACCTTATCATGTTGGTCCCTAAATCAGTTAATCAGGATAGCCCTTGTCAATTTTCTTCTCGTAATTGA

Coding sequence (CDS)

ATGGCGATCTCCACCTCTAGACTTGGAAGAAGGCGTTGGATTGGGCAAAGAACATGGCGTAATCGATTCCCCTTCAGATTCTCTTCCCGACGACTCTTTCGTCTCACTATCCTATGCCTCGCTTTGATCGCAATTCTGCCTCCCATTTACTTCCATTTCAAGCTCAAGCGCTTTCAGCAGATGCAACAAAGGGACTGCAAATGGCTGAATGATCCTCCTCTTGTGTGTGCTCATGGGGGCGACTCATCTAAGGCTTTCCCAAACACTATGGATGCATATAGCATAGCTCTTCGTTCTCAAGCCAACTGCATTGAAGTTGATGTTTCTCGTTCTTCAGATGGAGTCTTATTTGCACTTCATGACAGGTATTTATCAAAACTGTTTACAGCCAGTCACCTTATCATGTTGGTCCCTAAATCAGTTAATCAGGATAGCCCTTGTCAATTTTCTTCTCGTAATTGA

Protein sequence

MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQMQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRYLSKLFTASHLIMLVPKSVNQDSPCQFSSRN

Homology

[Close]

BLAST of Lsi08G001750 vs. ExPASy Swiss-Prot
Match: F4I8H8 (Glycerophosphodiester phosphodiesterase GDPD4 OS=Arabidopsis thaliana OX=3702 GN=GDPD4 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-33
Identity = 73/127 (57.48%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAI   R  RR + G  T R RF     SR   R  +  +  +AI PP+YFHFKL+R +Q
Sbjct: 1   MAIFEWRHRRRPFDGGGTRRRRFFSPLYSRNFKRTILFAVIFLAIFPPLYFHFKLRRIRQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +  + C WL+ PPLVCAHGGDS+ AFPNTMDAYS A+RS+ +CIEVDVSRSSDGVLFALH
Sbjct: 61  IVAQKCDWLHHPPLVCAHGGDSTLAFPNTMDAYSFAIRSRVDCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           +R L ++
Sbjct: 121 NRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. ExPASy Swiss-Prot
Match: O14169 (Phosphatidylglycerol phospholipase C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4D7.02c PE=3 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 72  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRYLSKLF 129
           PPLV AH G  +K   NT+ A+  A+++ A+C+E DV  + D V+  LHDR L+++F
Sbjct: 31  PPLVIAHRGYKAKYPENTILAFQQAVKAGADCVETDVRLTKDEVVCILHDRNLNRVF 87

[Close]

BLAST of Lsi08G001750 vs. ExPASy Swiss-Prot
Match: P9WMU2 (Probable glycerophosphodiester phosphodiesterase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=glpQ1 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04
Identity = 24/62 (38.71%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 73  PLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRYLSKLFTASH 132
           P V AH G S+    +T+ AY +AL+  A+ +E DV  + DG L  +HDR L +  T + 
Sbjct: 12  PFVVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHDRRLDRTSTGAG 71

Query: 133 LI 135
           L+
Sbjct: 72  LV 73

[Close]

BLAST of Lsi08G001750 vs. ExPASy Swiss-Prot
Match: P9WMU3 (Probable glycerophosphodiester phosphodiesterase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=glpQ1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04
Identity = 24/62 (38.71%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 73  PLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRYLSKLFTASH 132
           P V AH G S+    +T+ AY +AL+  A+ +E DV  + DG L  +HDR L +  T + 
Sbjct: 12  PFVVAHRGASAARPEHTLAAYDLALKEGADGVECDVRLTRDGHLVCVHDRRLDRTSTGAG 71

Query: 133 LI 135
           L+
Sbjct: 72  LV 73

[Close]

BLAST of Lsi08G001750 vs. ExPASy TrEMBL
Match: A0A0A0KSR2 (Glycerophosphodiester phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G647310 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA+IAILPPIYFHFKLKRFQQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAIIAILPPIYFHFKLKRFQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQR+CKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQRNCKWLTHPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. ExPASy TrEMBL
Match: A0A5A7TDK6 (Glycerophosphodiester phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001420 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.9e-60
Identity = 115/127 (90.55%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA IAILPPIYFHFKLKRFQQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAFIAILPPIYFHFKLKRFQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQ++C WL  PPLVCAHGGDSSKAFPNTMDAY+IALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQKNCNWLTHPPLVCAHGGDSSKAFPNTMDAYTIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. ExPASy TrEMBL
Match: A0A1S3CAF8 (Glycerophosphodiester phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103498627 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.9e-59
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA IAILPPIYFHFKLKR QQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAFIAILPPIYFHFKLKRLQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQ++C WL  PPLVCAHGGDSSKAFPNTMDAY+IALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQKNCNWLTHPPLVCAHGGDSSKAFPNTMDAYTIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. ExPASy TrEMBL
Match: A0A1S3CAB9 (Glycerophosphodiester phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103498627 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.9e-59
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA IAILPPIYFHFKLKR QQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAFIAILPPIYFHFKLKRLQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQ++C WL  PPLVCAHGGDSSKAFPNTMDAY+IALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQKNCNWLTHPPLVCAHGGDSSKAFPNTMDAYTIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. ExPASy TrEMBL
Match: A0A6J1IF47 (Glycerophosphodiester phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111472694 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58
Identity = 112/127 (88.19%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           M IS SR GRRRWIG RTWRNRFPFR SSRR+FRLTILCLALIAILPPI+FHFKLKRFQQ
Sbjct: 1   MVISGSRFGRRRWIGPRTWRNRFPFRISSRRIFRLTILCLALIAILPPIFFHFKLKRFQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           MQQ  CKW+NDPPLVCAHGGDSSKAFPNTMDAYS+ALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  MQQGKCKWMNDPPLVCAHGGDSSKAFPNTMDAYSLALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. NCBI nr
Match: XP_031741802.1 (glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA+IAILPPIYFHFKLKRFQQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAIIAILPPIYFHFKLKRFQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQR+CKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQRNCKWLTHPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. NCBI nr
Match: XP_011656047.1 (glycerophosphodiester phosphodiesterase GDPD4 isoform X3 [Cucumis sativus] >KAE8648976.1 hypothetical protein Csa_007803 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA+IAILPPIYFHFKLKRFQQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAIIAILPPIYFHFKLKRFQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQR+CKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQRNCKWLTHPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. NCBI nr
Match: XP_004141522.1 (glycerophosphodiester phosphodiesterase GDPD4 isoform X4 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA+IAILPPIYFHFKLKRFQQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAIIAILPPIYFHFKLKRFQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQR+CKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQRNCKWLTHPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. NCBI nr
Match: XP_031741801.1 (glycerophosphodiester phosphodiesterase GDPD4 isoform X1 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA+IAILPPIYFHFKLKRFQQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAIIAILPPIYFHFKLKRFQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQR+CKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQRNCKWLTHPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. NCBI nr
Match: KAA0039349.1 (glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis melo var. makuwa] >TYK00532.1 glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 8.1e-60
Identity = 115/127 (90.55%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLA IAILPPIYFHFKLKRFQQ
Sbjct: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLAFIAILPPIYFHFKLKRFQQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +QQ++C WL  PPLVCAHGGDSSKAFPNTMDAY+IALRSQANCIEVDVSRSSDGVLFALH
Sbjct: 61  IQQKNCNWLTHPPLVCAHGGDSSKAFPNTMDAYTIALRSQANCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           DR L ++
Sbjct: 121 DRDLQRI 127

[Close]

BLAST of Lsi08G001750 vs. TAIR 10
Match: AT1G71340.1 (PLC-like phosphodiesterases superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 7.3e-35
Identity = 73/127 (57.48%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 1   MAISTSRLGRRRWIGQRTWRNRFPFRFSSRRLFRLTILCLALIAILPPIYFHFKLKRFQQ 60
           MAI   R  RR + G  T R RF     SR   R  +  +  +AI PP+YFHFKL+R +Q
Sbjct: 1   MAIFEWRHRRRPFDGGGTRRRRFFSPLYSRNFKRTILFAVIFLAIFPPLYFHFKLRRIRQ 60

Query: 61  MQQRDCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALH 120
           +  + C WL+ PPLVCAHGGDS+ AFPNTMDAYS A+RS+ +CIEVDVSRSSDGVLFALH
Sbjct: 61  IVAQKCDWLHHPPLVCAHGGDSTLAFPNTMDAYSFAIRSRVDCIEVDVSRSSDGVLFALH 120

Query: 121 DRYLSKL 128
           +R L ++
Sbjct: 121 NRDLQRI 127

The following BLAST results are available for this feature:

BLAST of Lsi08G001750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I8H8	1.0e-33	57.48	Glycerophosphodiester phosphodiesterase GDPD4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O14169	5.3e-06	43.86	Phosphatidylglycerol phospholipase C OS=Schizosaccharomyces pombe (strain 972 / ...	[more]
P9WMU2	1.7e-04	38.71	Probable glycerophosphodiester phosphodiesterase 1 OS=Mycobacterium tuberculosis...	[more]
P9WMU3	1.7e-04	38.71	Probable glycerophosphodiester phosphodiesterase 1 OS=Mycobacterium tuberculosis...	[more]

BLAST of Lsi08G001750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSR2	1.2e-61	92.91	Glycerophosphodiester phosphodiesterase OS=Cucumis sativus OX=3659 GN=Csa_5G6473...	[more]
A0A5A7TDK6	3.9e-60	90.55	Glycerophosphodiester phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CAF8	1.9e-59	89.76	Glycerophosphodiester phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103498627 ...	[more]
A0A1S3CAB9	1.9e-59	89.76	Glycerophosphodiester phosphodiesterase OS=Cucumis melo OX=3656 GN=LOC103498627 ...	[more]
A0A6J1IF47	1.6e-58	88.19	Glycerophosphodiester phosphodiesterase OS=Cucurbita maxima OX=3661 GN=LOC111472...	[more]

BLAST of Lsi08G001750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031741802.1	2.5e-61	92.91	glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis sativus]	[more]
XP_011656047.1	2.5e-61	92.91	glycerophosphodiester phosphodiesterase GDPD4 isoform X3 [Cucumis sativus] >KAE8...	[more]
XP_004141522.1	2.5e-61	92.91	glycerophosphodiester phosphodiesterase GDPD4 isoform X4 [Cucumis sativus]	[more]
XP_031741801.1	2.5e-61	92.91	glycerophosphodiester phosphodiesterase GDPD4 isoform X1 [Cucumis sativus]	[more]
KAA0039349.1	8.1e-60	90.55	glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis melo var. maku...	[more]

BLAST of Lsi08G001750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71340.1	7.3e-35	57.48	PLC-like phosphodiesterases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	GENE3D	3.20.20.190	Phosphatidylinositol (PI) phosphodiesterase	coord: 59..144 e-value: 2.2E-15 score: 58.9
IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	SUPERFAMILY	51695	PLC-like phosphodiesterases	coord: 71..129
IPR030395	Glycerophosphodiester phosphodiesterase domain	PFAM	PF03009	GDPD	coord: 82..131 e-value: 2.0E-8 score: 34.3
IPR030395	Glycerophosphodiester phosphodiesterase domain	PROSITE	PS51704	GP_PDE	coord: 73..153 score: 15.474538
IPR044236	Glycerophosphodiester phosphodiesterase GDPD4	PANTHER	PTHR47449	GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD4	coord: 10..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G001750.1	Lsi08G001750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006071	glycerol metabolic process
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008889	glycerophosphodiester phosphodiesterase activity
molecular_function	GO:0008081	phosphoric diester hydrolase activity