Lsi08G001710 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G001710
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Abhydrolase_3 domain-containing protein
Location	chr08: 3533342 .. 3533674 (+)
RNA-Seq Expression	Lsi08G001710
Synteny	Lsi08G001710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAACCTTGGAACAAACAGATTGGGCTTGGAAAGCATTTTTGCCAAATGGGTCAGACAGAAACCACCCAGCGGCGCACGTGTTCGGAGCCGGTGTCGGAGACATGTTGAGTGTGACATTTCCGGCGACGCTTTTGATCGTGGGAGGACGAGACCAGTTACAAGATTGGCAAAAAAGGTATTACGAGTGGCTGAAAGAGGCTGAAAAGGAAGCTGATTTGATTGAATATCCAAATGCCATTCATGGATTTTATGCAGTTCCTGAGAACAAAGATTCTTCGTTGCTAATTAAAGATGCATCTAATTTCATGCACAAACATATGGCACTCTAA

mRNA sequence

ATGTTAACCTTGGAACAAACAGATTGGGCTTGGAAAGCATTTTTGCCAAATGGGTCAGACAGAAACCACCCAGCGGCGCACGTGTTCGGAGCCGGTGTCGGAGACATGTTGAGTGTGACATTTCCGGCGACGCTTTTGATCGTGGGAGGACGAGACCAGTTACAAGATTGGCAAAAAAGGTATTACGAGTGGCTGAAAGAGGCTGAAAAGGAAGCTGATTTGATTGAATATCCAAATGCCATTCATGGATTTTATGCAGTTCCTGAGAACAAAGATTCTTCGTTGCTAATTAAAGATGCATCTAATTTCATGCACAAACATATGGCACTCTAA

Coding sequence (CDS)

ATGTTAACCTTGGAACAAACAGATTGGGCTTGGAAAGCATTTTTGCCAAATGGGTCAGACAGAAACCACCCAGCGGCGCACGTGTTCGGAGCCGGTGTCGGAGACATGTTGAGTGTGACATTTCCGGCGACGCTTTTGATCGTGGGAGGACGAGACCAGTTACAAGATTGGCAAAAAAGGTATTACGAGTGGCTGAAAGAGGCTGAAAAGGAAGCTGATTTGATTGAATATCCAAATGCCATTCATGGATTTTATGCAGTTCCTGAGAACAAAGATTCTTCGTTGCTAATTAAAGATGCATCTAATTTCATGCACAAACATATGGCACTCTAA

Protein sequence

MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKRYYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL

Homology

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BLAST of Lsi08G001710 vs. ExPASy Swiss-Prot
Match: Q9LT10 (Probable carboxylesterase 18 OS=Arabidopsis thaliana OX=3702 GN=CXE18 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-20
Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKR 60
           +++ ++TDW WKA    G +R+H A +V G    D+  + +P T+++V G D L+DWQ+ 
Sbjct: 226 LVSPDRTDWCWKAM---GLNRDHEAVNVGGPNAVDISGLDYPETMVVVAGFDPLKDWQRS 285

Query: 61  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMA 110
           YYEWLK   K+A LIEYPN  H FY  PE  ++  LI    +F+ + +A
Sbjct: 286 YYEWLKLCGKKATLIEYPNMFHAFYIFPELPEAGQLIMRIKDFVDERVA 331

[Close]

BLAST of Lsi08G001710 vs. ExPASy Swiss-Prot
Match: Q9LYC1 (Gibberellin receptor GID1B OS=Arabidopsis thaliana OX=3702 GN=GID1B PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKRY 61
           +T++  DW W+A+LP G DR+HPA + FG     +  V FP +L++V G D +QDWQ  Y
Sbjct: 239 VTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAY 298

Query: 62  YEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMH 106
            + LK+   E +L+    A  GFY +P N     L+++ + F+H
Sbjct: 299 VDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLMEELNKFVH 342

[Close]

BLAST of Lsi08G001710 vs. ExPASy Swiss-Prot
Match: Q940G6 (Gibberellin receptor GID1C OS=Arabidopsis thaliana OX=3702 GN=GID1C PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.5e-18
Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKRY 61
           +T+   DW W+AFLP G DR HPA   FG     +  ++FP +L++V G D +QDWQ +Y
Sbjct: 237 VTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKY 296

Query: 62  YEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMH 106
            E LK+A +E  L+    A  GFY +P N     ++ + + F++
Sbjct: 297 AEGLKKAGQEVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAFVN 340

[Close]

BLAST of Lsi08G001710 vs. ExPASy Swiss-Prot
Match: Q9MAA7 (Gibberellin receptor GID1A OS=Arabidopsis thaliana OX=3702 GN=GID1A PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKRY 61
           +T+   DW WKAFLP G DR HPA + F      +  V+FP +L++V G D ++DWQ  Y
Sbjct: 239 VTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAY 298

Query: 62  YEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMH 106
            E LK+A +E  L+    A  GFY +P N     ++ + S F++
Sbjct: 299 AEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVN 342

[Close]

BLAST of Lsi08G001710 vs. ExPASy Swiss-Prot
Match: Q6L545 (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica OX=39947 GN=GID1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-12
Identity = 35/107 (32.71%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKRY 61
           +TL+  DW WKA+LP  +DR+HPA + FG     +  + F  +L+IV G D   D Q  Y
Sbjct: 246 VTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAY 305

Query: 62  YEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHM 109
            + L+E      +++  NA  GFY +P       ++++ S+F++ ++
Sbjct: 306 ADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANL 352

[Close]

BLAST of Lsi08G001710 vs. ExPASy TrEMBL
Match: A0A5D3BQZ2 (Putative carboxylesterase 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001390 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.3e-45
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGA-GVGDMLSVTFPATLLIVGGRDQLQDWQK 60
           MLTLE+TDW+WKAFLPNGS RNHPAAHVFGA GV D+ S TFP TLLIVGGRD L+DW++
Sbjct: 229 MLTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDISSATFPPTLLIVGGRDPLRDWER 288

Query: 61  RYYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           RYYEWLKE  KE DL+EYPNAIHGFYAVPE K+ SLLIKDA +FMHKHM L
Sbjct: 289 RYYEWLKEGGKEVDLVEYPNAIHGFYAVPELKECSLLIKDAVDFMHKHMPL 339

[Close]

BLAST of Lsi08G001710 vs. ExPASy TrEMBL
Match: A0A1S3CBK4 (probable carboxylesterase 18 OS=Cucumis melo OX=3656 GN=LOC103498629 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44
Identity = 87/110 (79.09%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGA-GVGDMLSVTFPATLLIVGGRDQLQDWQKR 61
           LTLE+TDW+WKAFLPNGS RNHPAAHVFGA GV D  S TFP TLLIVGGRD L+DW++R
Sbjct: 231 LTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDTSSATFPPTLLIVGGRDPLRDWERR 290

Query: 62  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           YYEWLKE  KE DL+EYPNAIHGFYAVPE K+ SLLIKDA +FMHKHM L
Sbjct: 291 YYEWLKEGGKEVDLVEYPNAIHGFYAVPELKECSLLIKDAIDFMHKHMPL 340

[Close]

BLAST of Lsi08G001710 vs. ExPASy TrEMBL
Match: A0A6J1I994 (probable carboxylesterase 18 OS=Cucurbita maxima OX=3661 GN=LOC111472693 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.9e-42
Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKR 60
           ML+LEQ DW WKAFLP+GS+RNHPAAHVFGAG GD+    FP TLLIVGGRDQL+DW  +
Sbjct: 221 MLSLEQADWYWKAFLPDGSNRNHPAAHVFGAGAGDLPGEKFPTTLLIVGGRDQLRDWGMK 280

Query: 61  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           YYEWLKE++KE DL+EYPNAIHGFYAVP+ KD SLLIKD ++FM K + L
Sbjct: 281 YYEWLKESDKEVDLVEYPNAIHGFYAVPQLKDCSLLIKDVNDFMQKCLVL 330

[Close]

BLAST of Lsi08G001710 vs. ExPASy TrEMBL
Match: A0A6J1DXC5 (probable carboxylesterase 18 OS=Momordica charantia OX=3673 GN=LOC111023986 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.9e-40
Identity = 78/110 (70.91%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKR 60
           M+ LEQ DW WKAFLPNGS+RNHPAAHVFG   GD+  V FPA LLIVGG DQL+DW ++
Sbjct: 227 MVNLEQADWYWKAFLPNGSNRNHPAAHVFGPDAGDISGVKFPAXLLIVGGHDQLRDWGRK 286

Query: 61  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           YYEWLK A KE DL+EYP AIHGFYAVP+ KD+SLLIKDA++FM K +A+
Sbjct: 287 YYEWLKGAGKEVDLVEYPKAIHGFYAVPQLKDASLLIKDANDFMQKQLAV 336

[Close]

BLAST of Lsi08G001710 vs. ExPASy TrEMBL
Match: A0A5A7T8Z3 (Putative carboxylesterase 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001410 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-39
Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLS-VTFPATLLIVGGRDQLQDWQK 60
           ML L+Q+DW WKAFLP G DRNHPAAHVFG G GD +S V FPATLLI+GG+DQL DW K
Sbjct: 1   MLNLKQSDWYWKAFLPKGCDRNHPAAHVFGPGAGDDISKVKFPATLLILGGKDQLVDWGK 60

Query: 61  RYYEWLK-EAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHK 107
           RYYEWLK E  KE DL+EYPNAIHGFY VPE KDSSLLIKD ++F+HK
Sbjct: 61  RYYEWLKDECGKEVDLVEYPNAIHGFYIVPELKDSSLLIKDMNDFIHK 108

[Close]

BLAST of Lsi08G001710 vs. NCBI nr
Match: XP_038889726.1 (probable carboxylesterase 18 [Benincasa hispida])

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKR 60
           MLTL+QTDW+WKAFLPNGS RNHPAAHVFGAGVGDM S+ FPATLLIVGGRD LQDWQKR
Sbjct: 223 MLTLQQTDWSWKAFLPNGSSRNHPAAHVFGAGVGDMSSIVFPATLLIVGGRDLLQDWQKR 282

Query: 61  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           YYEWLKEA KE DL+EYPNAIHGFYAVPE KDSSLLIKDA++F+HKHM+L
Sbjct: 283 YYEWLKEAGKEVDLVEYPNAIHGFYAVPELKDSSLLIKDATDFIHKHMSL 332

[Close]

BLAST of Lsi08G001710 vs. NCBI nr
Match: KAA0039346.1 (putative carboxylesterase 18 [Cucumis melo var. makuwa] >TYK00529.1 putative carboxylesterase 18 [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 6.9e-45
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGA-GVGDMLSVTFPATLLIVGGRDQLQDWQK 60
           MLTLE+TDW+WKAFLPNGS RNHPAAHVFGA GV D+ S TFP TLLIVGGRD L+DW++
Sbjct: 229 MLTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDISSATFPPTLLIVGGRDPLRDWER 288

Query: 61  RYYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           RYYEWLKE  KE DL+EYPNAIHGFYAVPE K+ SLLIKDA +FMHKHM L
Sbjct: 289 RYYEWLKEGGKEVDLVEYPNAIHGFYAVPELKECSLLIKDAVDFMHKHMPL 339

[Close]

BLAST of Lsi08G001710 vs. NCBI nr
Match: XP_008459513.1 (PREDICTED: probable carboxylesterase 18 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 4.5e-44
Identity = 87/110 (79.09%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGA-GVGDMLSVTFPATLLIVGGRDQLQDWQKR 61
           LTLE+TDW+WKAFLPNGS RNHPAAHVFGA GV D  S TFP TLLIVGGRD L+DW++R
Sbjct: 231 LTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDTSSATFPPTLLIVGGRDPLRDWERR 290

Query: 62  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           YYEWLKE  KE DL+EYPNAIHGFYAVPE K+ SLLIKDA +FMHKHM L
Sbjct: 291 YYEWLKEGGKEVDLVEYPNAIHGFYAVPELKECSLLIKDAIDFMHKHMPL 340

[Close]

BLAST of Lsi08G001710 vs. NCBI nr
Match: XP_038890672.1 (probable carboxylesterase 18 [Benincasa hispida])

HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43
Identity = 84/110 (76.36%), Postives = 94/110 (85.45%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKR 60
           MLTLE+ DW WKAFLPNGS+RNHPAAHVFG   GD+  V FPATLLIVGG+DQL DW K+
Sbjct: 219 MLTLEEADWFWKAFLPNGSNRNHPAAHVFGPRAGDISDVKFPATLLIVGGKDQLLDWGKK 278

Query: 61  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           YYEWLKE+ KE DL+EYPNAIHGFYAVPE KD+SLLIKD  +FMHK MA+
Sbjct: 279 YYEWLKESGKEVDLVEYPNAIHGFYAVPELKDASLLIKDVGDFMHKLMAV 328

[Close]

BLAST of Lsi08G001710 vs. NCBI nr
Match: XP_022974072.1 (probable carboxylesterase 18 [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41
Identity = 80/110 (72.73%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKR 60
           ML+LEQ DW WKAFLP+GS+RNHPAAHVFGAG GD+    FP TLLIVGGRDQL+DW  +
Sbjct: 221 MLSLEQADWYWKAFLPDGSNRNHPAAHVFGAGAGDLPGEKFPTTLLIVGGRDQLRDWGMK 280

Query: 61  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMAL 111
           YYEWLKE++KE DL+EYPNAIHGFYAVP+ KD SLLIKD ++FM K + L
Sbjct: 281 YYEWLKESDKEVDLVEYPNAIHGFYAVPQLKDCSLLIKDVNDFMQKCLVL 330

[Close]

BLAST of Lsi08G001710 vs. TAIR 10
Match: AT5G23530.1 (carboxyesterase 18 )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKR 60
           +++ ++TDW WKA    G +R+H A +V G    D+  + +P T+++V G D L+DWQ+ 
Sbjct: 226 LVSPDRTDWCWKAM---GLNRDHEAVNVGGPNAVDISGLDYPETMVVVAGFDPLKDWQRS 285

Query: 61  YYEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMHKHMA 110
           YYEWLK   K+A LIEYPN  H FY  PE  ++  LI    +F+ + +A
Sbjct: 286 YYEWLKLCGKKATLIEYPNMFHAFYIFPELPEAGQLIMRIKDFVDERVA 331

[Close]

BLAST of Lsi08G001710 vs. TAIR 10
Match: AT3G63010.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKRY 61
           +T++  DW W+A+LP G DR+HPA + FG     +  V FP +L++V G D +QDWQ  Y
Sbjct: 239 VTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAY 298

Query: 62  YEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMH 106
            + LK+   E +L+    A  GFY +P N     L+++ + F+H
Sbjct: 299 VDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLMEELNKFVH 342

[Close]

BLAST of Lsi08G001710 vs. TAIR 10
Match: AT5G27320.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 5.3e-19
Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKRY 61
           +T+   DW W+AFLP G DR HPA   FG     +  ++FP +L++V G D +QDWQ +Y
Sbjct: 237 VTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKY 296

Query: 62  YEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMH 106
            E LK+A +E  L+    A  GFY +P N     ++ + + F++
Sbjct: 297 AEGLKKAGQEVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAFVN 340

[Close]

BLAST of Lsi08G001710 vs. TAIR 10
Match: AT3G05120.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 2   LTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKRY 61
           +T+   DW WKAFLP G DR HPA + F      +  V+FP +L++V G D ++DWQ  Y
Sbjct: 239 VTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAY 298

Query: 62  YEWLKEAEKEADLIEYPNAIHGFYAVPENKDSSLLIKDASNFMH 106
            E LK+A +E  L+    A  GFY +P N     ++ + S F++
Sbjct: 299 AEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVN 342

[Close]

BLAST of Lsi08G001710 vs. TAIR 10
Match: AT5G06570.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 3.7e-12
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 1   MLTLEQTDWAWKAFLPNGSDRNHPAAHVFGAGVGDMLSVTFPATLLIVGGRDQLQDWQKR 60
           +L+L+  D  W+  LPNG+ R+H  A+ FG     + S++    L+IVGG + L+D  K 
Sbjct: 220 LLSLDLLDKFWRLSLPNGATRDHHMANPFGPTSPTLESISLEPMLVIVGGSELLRDRAKE 279

Query: 61  Y-YEWLKEAEKEADLIEYPNAIHGFYA-VPENKDSSLLIKDASNFMH 106
           Y Y+  K   K  D IE+ N  HGFY+  P ++ +  +++   +FM+
Sbjct: 280 YAYKLKKMGGKRVDYIEFENKEHGFYSNYPSSEAAEQVLRIIGDFMN 326

The following BLAST results are available for this feature:

BLAST of Lsi08G001710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT10	1.6e-20	41.28	Probable carboxylesterase 18 OS=Arabidopsis thaliana OX=3702 GN=CXE18 PE=1 SV=1	[more]
Q9LYC1	1.5e-18	38.46	Gibberellin receptor GID1B OS=Arabidopsis thaliana OX=3702 GN=GID1B PE=1 SV=1	[more]
Q940G6	7.5e-18	38.46	Gibberellin receptor GID1C OS=Arabidopsis thaliana OX=3702 GN=GID1C PE=1 SV=1	[more]
Q9MAA7	2.2e-17	39.42	Gibberellin receptor GID1A OS=Arabidopsis thaliana OX=3702 GN=GID1A PE=1 SV=1	[more]
Q6L545	1.2e-12	32.71	Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica OX=39947 GN=GID1 PE=1 ...	[more]

BLAST of Lsi08G001710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQZ2	3.3e-45	79.28	Putative carboxylesterase 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CBK4	2.2e-44	79.09	probable carboxylesterase 18 OS=Cucumis melo OX=3656 GN=LOC103498629 PE=4 SV=1	[more]
A0A6J1I994	5.9e-42	72.73	probable carboxylesterase 18 OS=Cucurbita maxima OX=3661 GN=LOC111472693 PE=4 SV...	[more]
A0A6J1DXC5	1.9e-40	70.91	probable carboxylesterase 18 OS=Momordica charantia OX=3673 GN=LOC111023986 PE=4...	[more]
A0A5A7T8Z3	2.1e-39	75.00	Putative carboxylesterase 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of Lsi08G001710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889726.1	1.1e-50	86.36	probable carboxylesterase 18 [Benincasa hispida]	[more]
KAA0039346.1	6.9e-45	79.28	putative carboxylesterase 18 [Cucumis melo var. makuwa] >TYK00529.1 putative car...	[more]
XP_008459513.1	4.5e-44	79.09	PREDICTED: probable carboxylesterase 18 [Cucumis melo]	[more]
XP_038890672.1	2.2e-43	76.36	probable carboxylesterase 18 [Benincasa hispida]	[more]
XP_022974072.1	1.2e-41	72.73	probable carboxylesterase 18 [Cucurbita maxima]	[more]

BLAST of Lsi08G001710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23530.1	1.1e-21	41.28	carboxyesterase 18	[more]
AT3G63010.1	1.1e-19	38.46	alpha/beta-Hydrolases superfamily protein	[more]
AT5G27320.1	5.3e-19	38.46	alpha/beta-Hydrolases superfamily protein	[more]
AT3G05120.1	1.5e-18	39.42	alpha/beta-Hydrolases superfamily protein	[more]
AT5G06570.1	3.7e-12	34.58	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013094	Alpha/beta hydrolase fold-3	PFAM	PF07859	Abhydrolase_3	coord: 2..85 e-value: 6.2E-16 score: 58.9
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 1..109 e-value: 1.2E-23 score: 85.8
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 2..107
None	No IPR available	PANTHER	PTHR23024:SF434	ACETYL ESTERASE	coord: 1..106
None	No IPR available	PANTHER	PTHR23024	ARYLACETAMIDE DEACETYLASE	coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G001710.1	Lsi08G001710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity