Lsi08G000790 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGGTATAAGGTTTGTCACAGTTTCCCTCAGTATGGCTTGACCAAGAGTTGCAGAGATTTGCTAGAGGGAGATTTGCTAGAGGAGTGTCTTTCCCTCTCCCCCTTACAGGATAAGGGTAGCAGGCTTTGGTTTGTTTCTCTTTGTGCTATTTTGTGGGGGCTTCGTTGCAAAAATAACAGAATTTTTTTAGAGGGGTAGAAAGATCAATACAGGATGTGGTCCTTATTAGATTTCATACTTCTCTTTAGATCTCTGTGCGTTAAGATTTTTGTAATTTTCCCTTAGGCCTTAGTTTGCTTGACTAGAGCTCTTCTTGGGGTTAGTTGGGCTCCTCTTAGTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAGAAAGAAAAGGTTTGCCATAGTTTTATATTTCATGGGTAAACACAGTCTAGAATGAGAACTAGAATAAAAAAGAAGGTGTGTATTACCTGAAATTGAATCCTCCAAGCTAAAAATCGATATTCAGATAGACATCTCACATGGATCCATGAAACACTTGTGATCTTTATTATCACTTAGATCATGTACTTTCTTAATGGATCCATGAAGATGCAGAGTTTGGGATGTATTTACAGTTCTTTGTACATTTGTGAAAGAAATCTGTATCATTCATTTAGTATGATGGATAATAATATTCATGTAATTAATTTGTTTGAATAACTTGGTACTTGGTAGTTGCTTTTTTTTTTATTGCCCACTTTGTTGAATGTGAGTTGTACATGGGTGGATAGGACTAAGGTGAATCCCTACATTACATCTACTGTTTCTTTTGTAAAACTGAAACTTGTTATCATCTTTAAATTCTATTTCTAGTCACATTGTGCCAATTCTGCTCCCATATTATTAAAATATATATGCTCATTGGAATGTTTTAAAAAAGTATGGGAGGTTCAGTTGCTGTACATGTTGCTGCAAAGAGAGCATTACCTAGCCTAGCTGGTTTAGTAGTTGTGGACGTTGTGGAGGTATGTTTTACTGTTATGTTGGTATTTCCAGAATCACGAGTTATGAATCATACTTTTTAAGCAATTTTCAACTTTTTGAATTTAGGGAACTGCCATGGCTTCATTGATTCATATGCAAAAAATCTTATCCAACAGGATGCAACATTTTCCAAGCATTGAGAAAGCGGTACACTACTATCCTTAGTCTGGAACCATATTCATATGTTTTTTTTTTTTACTTGTTTCTCCAAGGTGACACTTATTTCTTAGCTTTGTTTTAGTCCTTGGAACATTTGTCTTTTTACATGTTTTCTGCTGTCTGACAGAATGAATTTGTTTTTTAGTTTTATGTTTTTTAAATTTAAGTTTGTTTTCTTCTAATTCCATGTTATGGTTCTCACATTTCTTAGAAAAAATTGAATTTTTGGGTGCTAAGGGGATGTCAACCTAGTTGAGATGCCCGGGTGCACCTAACCTCACTACTTTTTTGGATATTTAGTTTCATTGTAATTGAGCTATTGCTCTTTTCATTATATCAATGAAAAGTTCCGTTTCCATTAAAAAAAAAAACTTGAATTCTTGGTCAAATTCTAAAAGCATAAACAAGTTTTTGAAAACACTTTTTTTTTTTTTCTTCCAAAATGTAGCTTGGTTTTTTAAAACATCGGTGGAAAGTGAATAACAAAACAAACGAACTTATAGGTGAAAGTAGTGTTTATAAGCTAATTTTCAAAAACCAAAATCAAAAAACAAATGGTTACCTAATAGGGTCTAAAAAAACAAATGATTACCTAACAGGGTCAAAATAAACCGGGGGTAGAAATCTTATGTATCACATTTCCAATCAAAAGAGTAGTAAAATAATTATGGCAGGTAATGATTCAAGTGTTGATGAGTTATCTTCTATTTGGCATAATTTTGTTTTAGCAAAAAGTGTTTCTAATAGATAAAAAATGCTTTTTCCTTTTTGAAAAGGAGAACTGTTAAAAAATGCCTCTAGAACGTGAATGTACTTCCATCTGTGGTGTTATTCTTATACCAAAGATAGAAAAACCTCAAAATGATCTTATTCTTATTAAATGAAGGATCCTGCCGGTTAATAACAGGTAACTGGTGAACAACTAAAGTTTACTAAAACTTAATAATTGATACATCAATCTGTCTCTAGAGTACATTATATTCAGAGACTAATGTATGTTATGCTTTTAGTTGCATAAATCATAATTTAAATAGTGGCACTTTACCATCAGCCTCTAGTTGGACCTTTTGTTTCTAGAAATTGGTGTTATGTTACTTGGTGAATGTTAACTGTTAAGGGTTCAGGGCTTTTAGTCTATTATTCACATGTAGGGAAAAATTAATATAGACGTTATTTTCCTCTCTCTATGGCTTTGGATCTTTACTGGTTTTGTTTGTCTACTGGATTTGTTTATCTACATCTAGTTATCTGATATAACTTATTAAATTTTTTATGCAACTAATTATTTAATATCACCACCACCTGTAGAAGATTTCATATTAAATTAATGTCTTTCTCATCTGACAGAGCCTTTGGACCGTAGGTGAAATATCATATTTTGATCTGCCACATTCTTCTATTAAACTGATGTCTTCTCTTTGTTAGCTTATTCCAGTATAGTTCGACTCTGTTAACCAATTAAATCATGCATGAATCTGTAGATTGAATGGAGTGTAAAAGGAGGTTCATTGAGGAATGTTGACTCTGCCCGTGTATCAATTCCCTCTACACTTACATACGATGATTCAAAGAAATGGTAGGTTAATTGTAATCAATTATATTTTTCATCGAGTAGTATACTAAAAGCTTGTTCATATTTACTTCTTGATTAGCCGATTTCATCGTCTGCTTGGATTTTACTTCTGTATCCATGAAACATCTGAATTTGTGGTGCAGCTATACTTACCGAGCAAAACTGGAAGAAACAGAACAGTATTGGAAAAGCTGGTATGAAAATGAATATCCGTGATTTTGATCAGTCCTTTTGTTGTTATGTATGATTTAATCGGTCCTTTTGCCACCACATTTTAATCAGTCCTTATGTTATGTATGATTTGCAGTTACCAACCCCGCCCTCTTTCCACTTTCTTTATTTCCTCTCTTGGAATTCAAATTAGAGTATTCAGGAAAGAGAGGATGCAGCAATACCCCCACTTGGAAAGAATAG ATGTCAGTTGCTGTACATGTTGCTGCAAAGAGAGCATTACCTAGCCTAGCTGGTTTAGTAGTTGTGGACGTTGTGGAGGGAACTGCCATGGCTTCATTGATTCATATGCAAAAAATCTTATCCAACAGGATGCAACATTTTCCAAGCATTGAGAAAGCGGATCCTGCCGCTATACTTACCGAGCAAAACTGGAAGAAACAGAACAGTATTGGAAAAGCTGTTACCAACCCCGCCCTCTTTCCACTTTCTTTATTTCCTCTCTTGGAATTCAAATTAGAGTATTCAGGAAAGAGAGGATGCAGCAATACCCCCACTTGGAAAGAATAG ATGTCAGTTGCTGTACATGTTGCTGCAAAGAGAGCATTACCTAGCCTAGCTGGTTTAGTAGTTGTGGACGTTGTGGAGGGAACTGCCATGGCTTCATTGATTCATATGCAAAAAATCTTATCCAACAGGATGCAACATTTTCCAAGCATTGAGAAAGCGGATCCTGCCGCTATACTTACCGAGCAAAACTGGAAGAAACAGAACAGTATTGGAAAAGCTGTTACCAACCCCGCCCTCTTTCCACTTTCTTTATTTCCTCTCTTGGAATTCAAATTAGAGTATTCAGGAAAGAGAGGATGCAGCAATACCCCCACTTGGAAAGAATAG MSVAVHVAAKRALPSLAGLVVVDVVEGTAMASLIHMQKILSNRMQHFPSIEKADPAAILTEQNWKKQNSIGKAVTNPALFPLSLFPLLEFKLEYSGKRGCSNTPTWKE Homology
BLAST of Lsi08G000790 vs. ExPASy Swiss-Prot
Match: Q8BVQ5 (Protein phosphatase methylesterase 1 OS=Mus musculus OX=10090 GN=Ppme1 PE=1 SV=5) HSP 1 Score: 49.3 bits (116), Expect = 3.2e-05 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy Swiss-Prot
Match: Q4FZT2 (Protein phosphatase methylesterase 1 OS=Rattus norvegicus OX=10116 GN=Ppme1 PE=1 SV=2) HSP 1 Score: 49.3 bits (116), Expect = 3.2e-05 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy Swiss-Prot
Match: Q58DN4 (Protein phosphatase methylesterase 1 OS=Bos taurus OX=9913 GN=PPME1 PE=2 SV=3) HSP 1 Score: 48.5 bits (114), Expect = 5.5e-05 Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy Swiss-Prot
Match: Q9Y570 (Protein phosphatase methylesterase 1 OS=Homo sapiens OX=9606 GN=PPME1 PE=1 SV=3) HSP 1 Score: 48.5 bits (114), Expect = 5.5e-05 Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy Swiss-Prot
Match: Q9P7D2 (Protein phosphatase methylesterase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ppe1 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 9.3e-05 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy TrEMBL
Match: A0A6J1I7S5 (Protein phosphatase methylesterase 1 OS=Cucurbita maxima OX=3661 GN=LOC111472065 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.4e-17 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy TrEMBL
Match: A0A6J1I8X2 (Protein phosphatase methylesterase 1 OS=Cucurbita maxima OX=3661 GN=LOC111472065 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.4e-17 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy TrEMBL
Match: A0A6J1EBY6 (Protein phosphatase methylesterase 1 OS=Cucurbita moschata OX=3662 GN=LOC111432673 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.4e-17 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy TrEMBL
Match: A0A6J1EHR7 (Protein phosphatase methylesterase-1 OS=Cucurbita moschata OX=3662 GN=LOC111432673 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.4e-17 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. ExPASy TrEMBL
Match: A0A0A0KSW0 (Protein phosphatase methylesterase 1 OS=Cucumis sativus OX=3659 GN=Csa_5G649860 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. NCBI nr
Match: KAG6592359.1 (Protein phosphatase methylesterase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. NCBI nr
Match: XP_022973537.1 (protein phosphatase methylesterase 1 isoform X2 [Cucurbita maxima]) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. NCBI nr
Match: XP_023535503.1 (protein phosphatase methylesterase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. NCBI nr
Match: XP_022925364.1 (protein phosphatase methylesterase 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. NCBI nr
Match: XP_022925365.1 (protein phosphatase methylesterase 1 isoform X2 [Cucurbita moschata]) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Lsi08G000790 vs. TAIR 10
Match: AT4G10050.1 (esterase/lipase/thioesterase family protein ) HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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