Homology
BLAST of Lsi08G000550 vs. ExPASy Swiss-Prot
Match:
A8MS85 (Transcription elongation factor SPT6 homolog OS=Arabidopsis thaliana OX=3702 GN=SPT6 PE=1 SV=1)
HSP 1 Score: 2015.0 bits (5219), Expect = 0.0e+00
Identity = 1129/1654 (68.26%), Postives = 1303/1654 (78.78%), Query Frame = 0
Query: 4 EDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIV-DDVEEEDEEDVEER 63
ED + E DD EP+ GD + H+ D+E+++D+ G +EYE DGFIV D+ EEE+EE+ EER
Sbjct: 11 EDHELEDDDGEPVHGDPAE-HDENDDEEDDDDVG-NEYENDGFIVNDEDEEEEEEEDEER 70
Query: 64 EDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSG 123
+DSD+ERQKKKK++KK++ LDEDDY LL+DNN+ ++ +++KRLKKA+R+ G
Sbjct: 71 KDSDEERQKKKKKRKKKDEGLDEDDYLLLQDNNVKFKK----RQYKRLKKAQREQGNGQG 130
Query: 124 FSDDEDFVESSRGG--RTAEEKLKRSLFGDDEA--PLEDIAEEEEQPEEEEDADIGDEDE 183
S D++F SRGG R+AE+K+K LF D + P +D+ +EE+ EE+ +G EDE
Sbjct: 131 ESSDDEF--DSRGGTRRSAEDKIKDRLFDDVDVDDPPDDVGDEEDLVVEED--VVGSEDE 190
Query: 184 MADFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD 243
MADFIVDE+ DE G P +R KKKK RQ G TA+++A+EIFGDVDELL +RK+ L
Sbjct: 191 MADFIVDED-DEHGPP-KRGNSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLA 250
Query: 244 THEWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEA 303
+++ E+RLEDEFEP V+SEKYMT DD+IR++DIPERMQISEESTGSPP+++ S+++E+
Sbjct: 251 SNQRMERRLEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEES 310
Query: 304 SWIHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK 363
+WI+ +A+ + G GR SV KDDI ++L+L HVQKL+IPFIAMYRKE+ SLL
Sbjct: 311 NWIYAQLASQLRESDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL- 370
Query: 364 DTEHEAGD-DQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRT 423
+ GD D K P +WHK+ W I DLDKKWLLL+KRK AL YY RY EE R
Sbjct: 371 ----DTGDFDGANQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRR 430
Query: 424 AEHVTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKS 483
TR +LN+ LF+SV KSL+ AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS
Sbjct: 431 VYDETRLNLNQYLFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKS 490
Query: 484 LYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESP 543
YSICSKAGLWEVA KFGYS+EQ GL LSLEK+ DELED KETPEEMA NF CAMFE+
Sbjct: 491 QYSICSKAGLWEVANKFGYSAEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENS 550
Query: 544 QAVLKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLR 603
AVLKGARHMAAVEISCEP V+K+VR +M+ AV+STSPT DGN IDSFHQFS +KWLR
Sbjct: 551 LAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLR 610
Query: 604 EKPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNE 663
EKPLS+FE AQWLLIQK EEEKLL VT KLPE ++N+LISD NE+YLS GVSK AQLWNE
Sbjct: 611 EKPLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNE 670
Query: 664 QRKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISS 723
QRKLIL+DAL FLLPSMEKEARSL+TS+AK LL EYG LWNKVS GPYQ KE DI+
Sbjct: 671 QRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINL 730
Query: 724 DEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERV 783
DEEAAPRVMACCWGPGKP TFVMLDSSGEVLDVLY GSLT RSQNVNDQQRKK+DQ+RV
Sbjct: 731 DEEAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRV 790
Query: 784 LKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLP 843
LKFM DHQPHVV LGAVNLSCTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLP
Sbjct: 791 LKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLP 850
Query: 844 RLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLT 903
RLYENSRIS +QL QSG V+RAVALGRYLQNPLAM ATLCGPGREILSWKL+PLENFL
Sbjct: 851 RLYENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQ 910
Query: 904 PDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSI 963
DEKYGMVEQVMVD+TNQVG+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSI
Sbjct: 911 LDEKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSI 970
Query: 964 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAK 1023
F RKD + HGLGKKVFVNA GFLR+RRSGLAASSSQFIDLLDDTRIHPESY+LAQELAK
Sbjct: 971 FVRKDLI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAK 1030
Query: 1024 DVFDEDVKGDANDDEDA-EMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKREL 1083
D++DEDV+GD+NDDEDA EMAIEHVRDRP LR + +DEY SKKRE+K+ET+ +I REL
Sbjct: 1031 DIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIREL 1090
Query: 1084 MQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGM 1143
GFQDWR ++EPS DEEFYMISGETEDT+AEGRIVQA+VR++ +AIC L+SGLTGM
Sbjct: 1091 SCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGM 1150
Query: 1144 LMKEDYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNL 1203
LMKED+ DD R+I DL+D+L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NRHQ QN+
Sbjct: 1151 LMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNV 1210
Query: 1204 DPYYHEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESI 1263
D YYHEDR+SLQ +EK+RKEKEL ++HFK RMIVHPRFQNITAD+A E LSDKD GESI
Sbjct: 1211 DAYYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESI 1270
Query: 1264 VRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEV 1323
VRPSSRG +FLTLTLKIYDGVYAHK+I EGGKE+KDITSL IGKTL IGEDTFEDLDEV
Sbjct: 1271 VRPSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEV 1330
Query: 1324 MDRYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFIL 1383
MDRYVDPLV+HLK ML+YRKFR+GTK+EVD+L++IEK E P RIVY FGISHEHPGTFIL
Sbjct: 1331 MDRYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFIL 1390
Query: 1384 TYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVP 1443
+YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP +SAPSIRS+AA VP
Sbjct: 1391 SYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVP 1450
Query: 1444 MRSPATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPS 1503
MRSPA GS S G WG S +GGW+ S DRS GS G + RN GGRDGHPS
Sbjct: 1451 MRSPADHGS---SGGSGWGSSQSEGGWKGNS---DRS---GSGRG-GEYRNGGGRDGHPS 1510
Query: 1504 GLPRPYGGRGRGRGSYNNNRGNNERSDSSYD-----------------GSRWDSSSKDGD 1563
G PRPYGGRGRGRG + N++R D + D G W S S
Sbjct: 1511 GAPRPYGGRGRGRGRGRRDDMNSDRQDGNGDWGNNDTGTADGGWGNSGGGGWGSESAGKK 1570
Query: 1564 DGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGGNGW--------SDSNGGGGGGGGGSGG 1618
G + G ++ K G W SG GGG GW S +GG G G GG G
Sbjct: 1571 TGGGSTGGWGSESGGNKSDGAGSWGSGSGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGS 1630
BLAST of Lsi08G000550 vs. ExPASy Swiss-Prot
Match:
Q9CAM1 (Transcription elongation factor SPT6-like OS=Arabidopsis thaliana OX=3702 GN=At1g63210 PE=1 SV=2)
HSP 1 Score: 1587.4 bits (4109), Expect = 0.0e+00
Identity = 869/1415 (61.41%), Postives = 1075/1415 (75.97%), Query Frame = 0
Query: 10 LDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVEEREDSDDER 69
+D+ + D V+ EED+EDE+ + E++ DGF+V+ ++ +EE+ E+R S E+
Sbjct: 4 IDEEPQIHEDPVENR----EEDDEDEDDQYEFD-DGFLVNGSDDGEEEE-EQRHCS--EK 63
Query: 70 QKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDF 129
+ + +RKK E + L EDDY LL+DNN + QR K+KRLKK+ S++ED
Sbjct: 64 KSRSRRKKDESFTLHEDDYLLLKDNNDTFQR----NKYKRLKKS----------SEEEDK 123
Query: 130 VESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVD 189
+ + DD D+D+++ FIVDE D
Sbjct: 124 INN-----------------DD-----------------------DDDDLSHFIVDE--D 183
Query: 190 ERGAP-LRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLE 249
+ GA +RR+K+K K+ G S AL+ A+++FGD +ELL+LRK++L +E E++LE
Sbjct: 184 DHGAQGMRRKKMKYKQ-----GTDSNALRYANDVFGDPEELLKLRKKDLKYNEKIERKLE 243
Query: 250 DEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASWIHGHIANG 309
DEFEP+V+SEKYMTEKDD+IR++D+PERMQI EE+ G ++D S+ +E++WI+ +
Sbjct: 244 DEFEPMVLSEKYMTEKDDEIRKLDVPERMQIFEEAIGIVSLDDMSIQEESNWIYARLL-- 303
Query: 310 MNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHEAGDDQ 369
G+ + KDDI+++L++ HVQKL+IPFIAMYRKE+ SLL D+ + D
Sbjct: 304 ------QEQGQGCLINKDDIVKFLEMFHVQKLEIPFIAMYRKEQCRSLL-DSSDDDHDGS 363
Query: 370 DKN-DKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTRTSLN 429
D N DK +WHK+LW IQDLD+KW+LL+KRK AL YY R+ EE + LN
Sbjct: 364 DFNLDKKLETKWHKVLWMIQDLDRKWVLLRKRKTALFGYYTKRFEEE------TCMSDLN 423
Query: 430 RQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGL 489
+ LF+SV KSL+AAE+EREVDDVDSKFNLHFP E +DEGQ+KRP RKS YSICSK G+
Sbjct: 424 KSLFESVIKSLQAAETEREVDDVDSKFNLHFPHCE--IDEGQYKRPNRKSQYSICSKFGI 483
Query: 490 WEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGARHM 549
E A KFGYS+EQ GL LSLEK+ DELED K+TPEEMA N+ CAMF QAVLKGARHM
Sbjct: 484 KEFANKFGYSAEQLGLALSLEKVFVDELEDAKKTPEEMALNYECAMFGDSQAVLKGARHM 543
Query: 550 AAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDA 609
AAVEISCEP +RK+VR FM+ AV+STSPTPDGNV IDSFH+FS VKWL EKPL +F+
Sbjct: 544 AAVEISCEPSIRKYVRGIFMENAVVSTSPTPDGNVVIDSFHRFSAVKWLSEKPLRKFDGV 603
Query: 610 QWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLILQDAL 669
QWLLIQKAEEEKLL VT KLPE +N++IS+ +E+YLS GVSK AQLWNEQRKLIL+DA+
Sbjct: 604 QWLLIQKAEEEKLLQVTFKLPENQMNRIISECSEHYLSVGVSKYAQLWNEQRKLILEDAV 663
Query: 670 SGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEEAAPRVMA 729
GF+LPSMEKEARSL+TS+AK LL EYG LWNKVS GPY+ N +S+EEAAPRV+A
Sbjct: 664 HGFVLPSMEKEARSLLTSRAKTQLLSEYGQVLWNKVSSGPYRRNNN--TSEEEAAPRVLA 723
Query: 730 CCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPH 789
CCWGPG P TTFVMLDSSGE++DVLY+GS+ LRS++VNDQ+RKK DQ+R LKF+ DHQP
Sbjct: 724 CCWGPGNPETTFVMLDSSGELVDVLYSGSIGLRSRDVNDQKRKKMDQDRFLKFIRDHQPD 783
Query: 790 VVVLGAVNLSCTRLKDDIYEIIFKMVEENPRD-VGHEMDGLSIVYGDESLPRLYENSRIS 849
V+ L AVNLSC RLKD+IYE IF+MVEE P + V + +VY DESLPRLYENSRIS
Sbjct: 784 VLALAAVNLSCVRLKDEIYEAIFQMVEELPLNYVDDRIYDFPLVYADESLPRLYENSRIS 843
Query: 850 SDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDEKYGMVE 909
S+QL Q+GIVKRAV+LGRYLQNPLAM +TLCGPGR+ILSWKL+ ++FL PDEKY MVE
Sbjct: 844 SEQLPQQAGIVKRAVSLGRYLQNPLAMISTLCGPGRDILSWKLHSFQDFLDPDEKYEMVE 903
Query: 910 QVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTA 969
QVMVD+TNQVG+D NLA SHEWLFSPLQF++GLGPRKAASLQ+SLVRAGSIF RK+ +
Sbjct: 904 QVMVDITNQVGIDINLAASHEWLFSPLQFVSGLGPRKAASLQKSLVRAGSIFVRKELIN- 963
Query: 970 HGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED-VK 1029
HG+GKKVFVNA GFLR+RRSGLA SSSQFIDLLDDTRIHPESY LAQELAKDV+ D V+
Sbjct: 964 HGIGKKVFVNAAGFLRIRRSGLACSSSQFIDLLDDTRIHPESYGLAQELAKDVYAHDTVR 1023
Query: 1030 GDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGFQDWRK 1089
GD +D+ EMAIEHVRD P LR + +DEY +SK +E+K+ET+ I REL GFQDWR
Sbjct: 1024 GD--EDDAIEMAIEHVRDEPASLRKIVLDEYLRSKNQENKKETYSLIMRELSCGFQDWRS 1083
Query: 1090 QYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYVDD 1149
++E DEEFYMISGET++T+ EGRIVQATV+KV KA C L+ GL G+L+KEDY DD
Sbjct: 1084 LFKEVDSDEEFYMISGETKETIGEGRIVQATVKKVTSGKAKCVLDCGLPGILLKEDYSDD 1143
Query: 1150 SREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHED-R 1209
R+I DLS++L EGDIVTCK+KSI K RY V LVCKESEMR +H+ ++D YYHE+ R
Sbjct: 1144 GRDIVDLSNKLCEGDIVTCKVKSILKQRYHVLLVCKESEMR--KHRNLGDVDDYYHEEKR 1203
Query: 1210 SSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGP 1269
+S+ E+EK KE K+ FK RMIVHPRFQNITA++A LSDK+ GESIVRPSSRG
Sbjct: 1204 NSVLIEKEKVPKE----KKQFKSRMIVHPRFQNITAEQATVYLSDKNIGESIVRPSSRGL 1263
Query: 1270 SFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPL 1329
+ LTL +KI D VYA+K+I+EG KE+KDI SL RIGKTLKIG +TFEDLDEVMDRYVDPL
Sbjct: 1264 NHLTLMIKISDNVYANKEIIEGEKENKDIVSLQRIGKTLKIGNETFEDLDEVMDRYVDPL 1321
Query: 1330 VAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNP 1389
V HL ML++RKFR GTK+E+D+L+++EK P +VY FG+SHEHPG+FIL+YIRS NP
Sbjct: 1324 VTHLMTMLNHRKFRTGTKSEIDDLLRVEKGVNPKMVVYSFGVSHEHPGSFILSYIRSANP 1321
Query: 1390 HHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDD 1420
HHEYIGLYPKGFKFRKRMF D+D+L AYF+RHID+
Sbjct: 1384 HHEYIGLYPKGFKFRKRMFGDLDKLAAYFKRHIDN 1321
BLAST of Lsi08G000550 vs. ExPASy Swiss-Prot
Match:
Q8UVK2 (Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1)
HSP 1 Score: 528.5 bits (1360), Expect = 2.7e-148
Identity = 443/1575 (28.13%), Postives = 755/1575 (47.94%), Query Frame = 0
Query: 28 DEEDEEDEEGEDEYEKDGFIV--DDVEEEDEEDVEE---REDSDD-ERQKKKKRKKKEEY 87
+EE+EE+ E +DE+ ++ DDVEEE+EE+ E EDSD E + ++RK+ +
Sbjct: 34 EEEEEENTEDQDEHGNLRGLIDDDDVEEEEEEERGEPPAGEDSDSGEEVRHRRRKRSFDD 93
Query: 88 VLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDFVESSRGGRTAEE 147
LD+DD +L+E+ N+ ++ + KK+ R+K ++ G DDE ++
Sbjct: 94 YLDDDDLDLIEE-NLGVKVKRRKKKYSRVK-----TMDDEGDDDDE------------KD 153
Query: 148 KLKRSLF---GDDEAPLED-IAEEEEQPEEEEDADIGDEDEMADFIVDEEVDERGAPLRR 207
+ +F GD E +ED A + P ++E+ + +E ++ DFIVD++ G P
Sbjct: 154 LIADEIFTGDGDGEGEVEDGEAVDTLHPRDDEEEEDDEESDIDDFIVDDD----GQP--- 213
Query: 208 RKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDE------- 267
+ KKK ++ G + ALQEA EIFG + + D E E+ +DE
Sbjct: 214 --ITKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQDDESWDRPKK 273
Query: 268 --------------FEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDD 327
+EP + +MT++D++IR D+PER Q+ + P D L++
Sbjct: 274 QTKRRVSRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQL--RAIPVKPAEDDELEE 333
Query: 328 EASWIH---------------GHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLD 387
EA WI+ ++ G + F ++ K+ L+ + Q +
Sbjct: 334 EAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKE----ALNFMRNQHFE 393
Query: 388 IPFIAMYRKEEILSLLKDTEHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKK 447
+PFIA YRKE + + E D LW + D+KW L+ RK+
Sbjct: 394 VPFIAFYRKEYV-----EPELNIND----------------LWKVWQWDEKWTQLKTRKQ 453
Query: 448 ALQSYY---KNRYLEEIRTAEHVTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHF 507
L + ++ E+I R L + + L+ +S E+ DV + F L++
Sbjct: 454 NLTRLFQRMQSYQFEQISADPDKPLADSTRPLDTADMERLKDVQSIDELGDVYNHFLLYY 513
Query: 508 PPG-------------------EVGVDEGQ-----------------FKRPKRKSLYSIC 567
EV ++G+ K+ R+ +YSIC
Sbjct: 514 GRDIPKMQNAAKGGKKKLKKIKEVSEEDGEEAEVEEEEEEEEQKGPDLKQASRRDMYSIC 573
Query: 568 SKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLK 627
AGL +A KFG + EQFG L R++ + P E P E+A ++ C+ F +P+AVL+
Sbjct: 574 QSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAE-PLELAKDYVCSQFNTPEAVLE 633
Query: 628 GARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLS 687
GAR+M A++I+ EP VR +R F + A I+ PT G +D H K+L+ KP+
Sbjct: 634 GARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDVDEAHFAYSFKYLKNKPVK 693
Query: 688 RFEDAQWLLIQKAEEEKLLNVTLKLPEKHL-----NKLISDFNEYYLSDGVSKSAQLWNE 747
Q+L + AEEE LL + + + + + ++Y D S Q WN+
Sbjct: 694 ELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEIKQFYYRDEFSHQVQEWNK 753
Query: 748 QRKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPY----QHKEN 807
QR L ++ +L FL P M KE ++ + ++AK ++ L+N + V PY Q +E+
Sbjct: 754 QRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKLYNWLKVAPYRPDQQVEED 813
Query: 808 DISSDEEAAP--RVMACCWGPGKPATTFV-MLDSSGEVLDVLYTGSLTLR--SQNVNDQQ 867
D DE RV+ + G+ F +++ GEV+D L R + ++++
Sbjct: 814 DDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWREDERE 873
Query: 868 RKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLS 927
+K+ D E + KF+ +PHVV + N + +DI I ++ + + V G+
Sbjct: 874 KKQQDVENLKKFLLSKKPHVVAVSGENRDAHMVMEDIKRTISELEQNSSLPV----VGVE 933
Query: 928 IVYGDESLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWK 987
+V D L LY NS+ S + ++++AV++ R +Q+PL A +C +IL K
Sbjct: 934 LV--DNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQDPLVEFAQVCSTDDDILCLK 993
Query: 988 LNPLENFLTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQ 1047
L+PL+ + +E + ++ N+VG+D N AI+H + S +Q+I GLGPRK + L
Sbjct: 994 LHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQSLVQYICGLGPRKGSHLL 1053
Query: 1048 RSLVRAGS-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPE 1107
+ L + + + R VT +G KVF+N GF+++ + L S+ +I++LD +R+HPE
Sbjct: 1054 KILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPE 1113
Query: 1108 SYALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKRE---D 1167
+Y A+++A D + D ++ +D + A+E + + P L+ LD+D +A+ +R+ +
Sbjct: 1114 TYEWARKMAVDALEYD---ESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGN 1173
Query: 1168 KRETFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATV-----RK 1227
K T DI+ EL ++D R Y P+ +E F M++ ET +T G+++ V R+
Sbjct: 1174 KGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETPETFYIGKLITCVVTNIAHRR 1233
Query: 1228 VLGQKAICGLESGLTGM----LMKEDYVDDSREISD------------------------ 1287
G+ + + TG+ ++D + E+ +
Sbjct: 1234 PQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRTRLDNAVMG 1293
Query: 1288 ------LSD--------RLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLD 1347
LSD R+ G V C+I I ++ V L C+ S++ ++ D
Sbjct: 1294 FIPTKFLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVDLTCRTSDLSDKNNEWKLPKD 1353
Query: 1348 PYYHEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIV 1407
YY D + +QE+ +K+K+ + K R+I HP F NI +A +++ D G+ ++
Sbjct: 1354 TYYDFDAETDDVKQEEEQKKKQQRTTYIK-RVIAHPSFHNINFKQAEKMMESMDQGDVVI 1413
Query: 1408 RPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVM 1450
RPSS+G + LT+T K+ DG+Y H D+ E GKE + +G TL I + FEDLDE+
Sbjct: 1414 RPSSKGENHLTVTWKVADGIYQHVDVREEGKE-----NAFSLGHTLWINTEEFEDLDEIT 1473
BLAST of Lsi08G000550 vs. ExPASy Swiss-Prot
Match:
Q7KZ85 (Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2)
HSP 1 Score: 525.4 bits (1352), Expect = 2.3e-147
Identity = 465/1640 (28.35%), Postives = 782/1640 (47.68%), Query Frame = 0
Query: 28 DEEDEEDEEGEDEYEK---DGFIVDDVEEEDEEDVE--EREDSDDERQKKKKRKKKEEYV 87
D+E+EE+E +D+ E+ GFI DD +E++ E+ E + DS+D+ KK+++ +
Sbjct: 36 DDEEEEEENLDDQDEQGNLKGFINDDDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDR 95
Query: 88 LDEDDYELLEDN-NISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDFVESSRGGRTAE- 147
L++DD++L+E+N + ++R +K++R+KK SDDED E G E
Sbjct: 96 LEDDDFDLIEENLGVKVKR---GQKYRRVKK----------MSDDEDDDEEEYGKEEHEK 155
Query: 148 EKLKRSLF--GDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDERGAPLRRR 207
E + +F G+ E E + PEEEE+ D +E ++ DFIVD++ G PL++
Sbjct: 156 EAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDD--EESDIDDFIVDDD----GQPLKKP 215
Query: 208 KLKKKKSRQAPGVSSTALQEAHEIFG---DVDELLQLRK--REL-DTHEWREKRLEDE-- 267
K +KK PG + ALQEA EIFG D DE + + EL + +E+ + E E
Sbjct: 216 KWRKK----LPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEYEDDEAEGEIR 275
Query: 268 -------------------FEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPIND 327
+EP + ++T++D++IR D+PER Q+ S D
Sbjct: 276 VRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL--RSIPVKGAED 335
Query: 328 ASLDDEASWIHGH-IANGMNSLF-----------GNASGRDLSVTKDDILRYLDLVHVQK 387
L++EA WI+ + A SL ++ R T I L + Q
Sbjct: 336 DELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQH 395
Query: 388 LDIPFIAMYRKEEILSLLKDTEHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKR 447
++PFIA YRKE + + E D LW + D+KW L+ R
Sbjct: 396 FEVPFIAFYRKEYV-----EPELHIND----------------LWRVWQWDEKWTQLRIR 455
Query: 448 KKALQSYYKNR---YLEEIRTAEHVTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNL 507
K+ L ++ E+I R L + + L+ +S E+ DV + F L
Sbjct: 456 KENLTRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLL 515
Query: 508 HFPPG-------------------EVGVDEG-------------QFKRPKRKSLYSICSK 567
++ E G +EG + K+ R+ +Y+IC
Sbjct: 516 YYGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQS 575
Query: 568 AGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGA 627
AGL +A KFG + EQFG L R++ + P E P E+A ++ C+ F +P+AVL+GA
Sbjct: 576 AGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAE-PLELAKDYVCSQFPTPEAVLEGA 635
Query: 628 RHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRF 687
R+M A++I+ EP VR+ +R F + A ++ +PT G +D H K+L+ KP+
Sbjct: 636 RYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKEL 695
Query: 688 EDAQWLLIQKAEEEKLLNVTLKLPEKHL------NKLISDFNEYYLSDGVSKSAQLWNEQ 747
D Q+L I AE+E LL + + K + + ++Y D S Q WN Q
Sbjct: 696 RDDQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQ 755
Query: 748 RKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPY----QHKEND 807
R + ++ AL FL M KE ++ + ++AK++++ L+N + V PY Q +E+D
Sbjct: 756 RTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDD 815
Query: 808 ISSDEEAAP--RVMACCWGPGKPATTF-VMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKK 867
DE RV+ + + F +++ GEV D L T R +++R+K
Sbjct: 816 DFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREK 875
Query: 868 --NDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSI 927
D E + KF+ + +PHVV + N L +D+ I+ ++ D G ++ + +
Sbjct: 876 KAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIVHEL------DQGQQLSSIGV 935
Query: 928 VYGDESLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKL 987
D L LY NS+ S + + ++++AV+L R +Q+PL A +C +IL K
Sbjct: 936 ELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKF 995
Query: 988 NPLENFLTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQR 1047
+PL+ + +E + ++ N+VG+D N AI+H + + +Q++ GLGPRK L +
Sbjct: 996 HPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLK 1055
Query: 1048 SLVRAGS-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPES 1107
L + + + +R VT +G KVF+N GFL++ + L S+ +I++LD +R+HPE+
Sbjct: 1056 ILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPET 1115
Query: 1108 YALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKRE---DK 1167
Y A+++A D + D ++ +D + A+E + + P L+ LD+D +A+ +R+ DK
Sbjct: 1116 YEWARKMAVDALEYD---ESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1175
Query: 1168 RETFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKV----- 1227
T DI+ EL ++D R Y P+ +E F M++ ET +T G+++ V +
Sbjct: 1176 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1235
Query: 1228 ---------------LGQKAIC-----------------------------GLESGLTGM 1287
L Q C L++G+TG
Sbjct: 1236 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1295
Query: 1288 LMKEDYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNL 1347
+ + D + + +R+ G V C+I I ++ L C+ S++ ++
Sbjct: 1296 IPTKFLSD--KVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK 1355
Query: 1348 DPYYHEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESI 1407
D YY D + +QE+ K K+ + K R+I HP F NI +A +++ D G+ I
Sbjct: 1356 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1415
Query: 1408 VRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEV 1467
+RPSS+G + LT+T K+ DG+Y H D+ E GKE + +G TL I + FEDLDE+
Sbjct: 1416 IRPSSKGENHLTVTWKVSDGIYQHVDVREEGKE-----NAFSLGATLWINSEEFEDLDEI 1475
Query: 1468 MDRYVDPLVAHLKAMLSYRKFR---RGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGT 1514
+ RYV P+ + + +L+++ ++ G + +++EL+ K E P I Y E PG
Sbjct: 1476 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1535
BLAST of Lsi08G000550 vs. ExPASy Swiss-Prot
Match:
Q62383 (Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=2)
HSP 1 Score: 520.0 bits (1338), Expect = 9.6e-146
Identity = 458/1640 (27.93%), Postives = 778/1640 (47.44%), Query Frame = 0
Query: 28 DEEDEEDEEGEDEYEKDGFIVDDV-EEEDEEDVEERE-----DSDDERQKKKKRKKKEEY 87
D+++EE+EE D+ ++ G + D + +++DEE+ EE E DS+D+ KK+++ +
Sbjct: 35 DDDEEEEEENLDDQDERGNLKDFINDDDDEEEGEEDEGSDSGDSEDDVGHKKRKRPSFDD 94
Query: 88 VLDEDDYELLEDN-NISIQRPKGSKKFKRLKKARRDNLEPSGFSDDEDFVESSRGGRTAE 147
L++DD++L+E+N + ++R +K++R+KK DDED E +
Sbjct: 95 RLEDDDFDLIEENLGVKVKR---GQKYRRVKKMS---------DDDEDDEEEYGKEEHEK 154
Query: 148 EKLKRSLFGDDEAP--LEDIAEEEEQPEEEEDADIGDEDEMADFIVDEEVDERGAPLRRR 207
E + +F D+E E + P+EEE+ D +E ++ DFIVD++ G PL++
Sbjct: 155 EAIAGEIFQDEEGEEGQEAVEAPMAPPDEEEEDD--EESDIDDFIVDDD----GQPLKKP 214
Query: 208 KLKKKKSRQAPGVSSTALQEAHEIFG---DVDELLQLRK--REL-DTHEWREKRLEDE-- 267
K +KK PG + ALQEA EIFG D DE + + EL + +E+ + E E
Sbjct: 215 KWRKK----LPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDYEYEDDETEGEIR 274
Query: 268 -------------------FEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPIND 327
+EP + ++T++D++IR D+PER Q+ S D
Sbjct: 275 VRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL--RSIPVKAAED 334
Query: 328 ASLDDEASWIHGH-IANGMNSLFGNAS-----------GRDLSVTKDDILRYLDLVHVQK 387
L++EA WI+ + A SL + R T I L + Q
Sbjct: 335 DELEEEADWIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIKEALGFMRNQH 394
Query: 388 LDIPFIAMYRKEEILSLLKDTEHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKR 447
++PFIA YRKE + + E D LW + D+KW L+ R
Sbjct: 395 FEVPFIAFYRKEYV-----EPELHIND----------------LWRVWQWDEKWTQLRIR 454
Query: 448 KKALQSYYKNR---YLEEIRTAEHVTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNL 507
K+ L ++ E+I R L + + L+ +S E+ DV + F L
Sbjct: 455 KENLTRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLL 514
Query: 508 HF----------------------------PPGEVGVDEGQ----FKRPKRKSLYSICSK 567
++ GE DE Q K+ R+ +Y+IC
Sbjct: 515 YYGRDIPKMQNAAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQS 574
Query: 568 AGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGA 627
AGL +A KFG + EQFG L R++ + P E P E+A ++ C+ F +P+AVL+GA
Sbjct: 575 AGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAE-PLELAKDYVCSQFPTPEAVLEGA 634
Query: 628 RHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRF 687
R+M A++I+ EP VR+ +R F + A ++ +PT G +D H K+L+ KP+
Sbjct: 635 RYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKEL 694
Query: 688 EDAQWLLIQKAEEEKLLNVTLKLPEKHL------NKLISDFNEYYLSDGVSKSAQLWNEQ 747
D Q+L I AE+E LL + + + K + + ++Y D S Q WN Q
Sbjct: 695 RDDQFLKIGLAEDEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQ 754
Query: 748 RKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPY----QHKEND 807
R + ++ AL FL M KE ++ + ++A++ ++ L+N + V PY Q +E+D
Sbjct: 755 RTMAIERALQQFLYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVEEDD 814
Query: 808 ISSDEEAAP--RVMACCWGPGKPATTF-VMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKK 867
DE RV+ + + F +++ GEV D L T R +++R+K
Sbjct: 815 DFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREK 874
Query: 868 --NDQERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSI 927
D E + KF+ + +PHVV + N L +D+ I+ ++ D G ++ + +
Sbjct: 875 KAQDIETLKKFLVNKKPHVVTIAGENRDAQMLTEDVKRIVHEL------DQGQQLSSIGV 934
Query: 928 VYGDESLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKL 987
D L LY NS+ S + + ++++AV+L R +Q+PL A +C +IL K
Sbjct: 935 ELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKF 994
Query: 988 NPLENFLTPDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQR 1047
+PL+ + +E + ++ N+VG+D N AI+H + + +Q++ GLGPRK L +
Sbjct: 995 HPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLK 1054
Query: 1048 SLVRAGS-IFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPES 1107
L + + + +R VT +G KVF+N GFL++ + L S+ +I++LD +R+HPE+
Sbjct: 1055 ILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPET 1114
Query: 1108 YALAQELAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKRE---DK 1167
Y A+++A D + D ++ +D + A+E + + P L+ LD+D +A+ +R+ DK
Sbjct: 1115 YEWARKMAVDALEYD---ESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDK 1174
Query: 1168 RETFLDIKRELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKV----- 1227
T DI+ EL ++D R Y P+ +E F M++ ET +T G+++ V +
Sbjct: 1175 HITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRP 1234
Query: 1228 ---------------LGQKAIC-----------------------------GLESGLTGM 1287
L Q C L++G+TG
Sbjct: 1235 QGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGF 1294
Query: 1288 LMKEDYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNL 1347
+ + D + + +R+ G V C+I I ++ L C+ S++ ++
Sbjct: 1295 IPTKFLSD--KVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPK 1354
Query: 1348 DPYYHEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESI 1407
D YY D + +QE+ K K+ + K R+I HP F NI +A +++ D G+ I
Sbjct: 1355 DTYYDFDAEAADHKQEEDMKRKQQRTTYIK-RVIAHPSFHNINFKQAEKMMETMDQGDVI 1414
Query: 1408 VRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEV 1467
+RPSS+G + LT+T K+ G+Y H D+ E GKE + +G TL I + FEDLDE+
Sbjct: 1415 IRPSSKGENHLTVTWKVSAGIYQHVDVREEGKE-----NAFSLGATLWINSEEFEDLDEI 1474
Query: 1468 MDRYVDPLVAHLKAMLSYRKFR---RGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGT 1514
+ RYV P+ + + +L+++ ++ G + +++EL+ K E P I Y E PG
Sbjct: 1475 VARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGK 1534
BLAST of Lsi08G000550 vs. ExPASy TrEMBL
Match:
A0A1S3B3S8 (Transcription elongation factor spt6 OS=Cucumis melo OX=3656 GN=LOC103485847 PE=3 SV=1)
HSP 1 Score: 3023.8 bits (7838), Expect = 0.0e+00
Identity = 1576/1620 (97.28%), Postives = 1593/1620 (98.33%), Query Frame = 0
Query: 1 MRLEDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
MRL+ DD DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE
Sbjct: 1 MRLDTDD---DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
Query: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP
Sbjct: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
Query: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA
Sbjct: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
Query: 181 DFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTH 240
DFIVDEE DE GAP+RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDT
Sbjct: 181 DFIVDEEEDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQ 240
Query: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASW 300
EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPP +DASLDDEASW
Sbjct: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASW 300
Query: 301 IHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDT 360
IHGHIANGMNSLF NASG+DLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKD
Sbjct: 301 IHGHIANGMNSLFSNASGQDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDI 360
Query: 361 EHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
EHEAGDDQDKNDKAPTLRWHK+LWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH
Sbjct: 361 EHEAGDDQDKNDKAPTLRWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
Query: 421 VTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
VTRT+LNRQLFDSVN+SLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS
Sbjct: 421 VTRTTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
Query: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV
Sbjct: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
Query: 541 LKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 600
LKGARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP
Sbjct: 541 LKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 600
Query: 601 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK
Sbjct: 601 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
Query: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEE 720
LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYG NLW+KVS+GPYQHKENDISSDEE
Sbjct: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEE 720
Query: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF
Sbjct: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
Query: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY
Sbjct: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
Query: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDE 900
ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNPLENFLTPDE
Sbjct: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDE 900
Query: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR
Sbjct: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
Query: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF
Sbjct: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
Query: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGF 1080
DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDK ETFLDIKRELMQGF
Sbjct: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGF 1080
Query: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE
Sbjct: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
Query: 1141 DYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
DY DDSREISDLSDRL EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY
Sbjct: 1141 DYADDSREISDLSDRLREGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
Query: 1201 HEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
HEDRSSLQSEQEKSRKEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS
Sbjct: 1201 HEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
Query: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY
Sbjct: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
Query: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1380
VDPLVAHLKAMLSYRKFRRGTKAEVDELM+IEKSEYPMRI+YGFGISHEHPGTFILTYIR
Sbjct: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTYIR 1380
Query: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP
Sbjct: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
Query: 1441 ATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR 1500
ATGGSSAASAG PWGGSSH+GGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR
Sbjct: 1441 ATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR 1500
Query: 1501 PYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1560
PYGGRGRGRGSYNNNRGNN+RSDS YDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP
Sbjct: 1501 PYGGRGRGRGSYNNNRGNNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1560
Query: 1561 GGWSSGGS---GGGGNGWSDSNGGGGGGGGGSGGSWGGTGGNSKGNWGGSGASNSGGWGS 1618
GGWSSGGS GGGGNGW+DS GG GGG G GG WGGTGGNSKGNWGGSG SNSGGWGS
Sbjct: 1561 GGWSSGGSGGGGGGGNGWNDSTGGSGGGSG--GGGWGGTGGNSKGNWGGSGGSNSGGWGS 1615
BLAST of Lsi08G000550 vs. ExPASy TrEMBL
Match:
A0A0A0LKK6 (Transcription elongation factor spt6 OS=Cucumis sativus OX=3659 GN=Csa_2G075460 PE=3 SV=1)
HSP 1 Score: 3005.3 bits (7790), Expect = 0.0e+00
Identity = 1568/1629 (96.26%), Postives = 1592/1629 (97.73%), Query Frame = 0
Query: 1 MRLEDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
MRL+ D+ DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE
Sbjct: 1 MRLDTDE---DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
Query: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP
Sbjct: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
Query: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA
Sbjct: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
Query: 181 DFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTH 240
DFIVDEE DE GAP+RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDT
Sbjct: 181 DFIVDEEEDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQ 240
Query: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASW 300
EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPP +DASLDDEASW
Sbjct: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASW 300
Query: 301 IHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDT 360
IHGHIANG++SL NASG+DLSVTKDDILRYLDLVHVQKLDIPFI+MYRKEEILSLLKDT
Sbjct: 301 IHGHIANGVSSLSSNASGQDLSVTKDDILRYLDLVHVQKLDIPFISMYRKEEILSLLKDT 360
Query: 361 EHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
EHEAGDDQDKNDKAPTLRWHK+LWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH
Sbjct: 361 EHEAGDDQDKNDKAPTLRWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
Query: 421 VTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
VTRT+LNRQLFDSVN+SLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS
Sbjct: 421 VTRTTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
Query: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV
Sbjct: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
Query: 541 LKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 600
LKGARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPT DGNVAIDSFHQFSVVKWLREKP
Sbjct: 541 LKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTADGNVAIDSFHQFSVVKWLREKP 600
Query: 601 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
L+RFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK
Sbjct: 601 LNRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
Query: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEE 720
LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYG NLW+KVS+GPYQHKENDISSDEE
Sbjct: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEE 720
Query: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF
Sbjct: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
Query: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY
Sbjct: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
Query: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDE 900
ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNPLENFLTPDE
Sbjct: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDE 900
Query: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR
Sbjct: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
Query: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF
Sbjct: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
Query: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGF 1080
DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDK ETFLDIKRELMQGF
Sbjct: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGF 1080
Query: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE
Sbjct: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
Query: 1141 DYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
DY DDSR+ISDLSDRL EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY
Sbjct: 1141 DYADDSRDISDLSDRLREGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
Query: 1201 HEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
HEDRSSLQSEQEKSRKEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS
Sbjct: 1201 HEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
Query: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY
Sbjct: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
Query: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1380
VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRI+YGFGISHEHPGTFILTYIR
Sbjct: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIIYGFGISHEHPGTFILTYIR 1380
Query: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP
Sbjct: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
Query: 1441 ATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR 1500
ATGGSSAASAG PWGGSSH+GGWRSQSFDRDRSSTPGSRTGRNDNRNS GRDGHPSGLPR
Sbjct: 1441 ATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSSGRDGHPSGLPR 1500
Query: 1501 PYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1560
PYGGRGRGRGSYNNNRGNN+RSDS YDGSRWDSSSKDGDDGLSNFPGAKI NSPGKEAFP
Sbjct: 1501 PYGGRGRGRGSYNNNRGNNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIHNSPGKEAFP 1560
Query: 1561 GGWSSGGSGGGGNGWSDSNGGGGGGGGG------------SGGSWGGTGGNSKGNWGGSG 1618
GGWSSGG GGGGNGW++S+GGGGGGGGG GG WGGTGGNSKGNW GSG
Sbjct: 1561 GGWSSGG-GGGGNGWNESSGGGGGGGGGGGSGSGGGGSGSGGGGWGGTGGNSKGNWSGSG 1620
BLAST of Lsi08G000550 vs. ExPASy TrEMBL
Match:
A0A5D3DZK9 (Transcription elongation factor spt6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2406G00200 PE=3 SV=1)
HSP 1 Score: 2930.6 bits (7596), Expect = 0.0e+00
Identity = 1538/1622 (94.82%), Postives = 1559/1622 (96.12%), Query Frame = 0
Query: 1 MRLEDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDE--ED 60
MRL+ DD DDREPLDGDDVDGHNMGDEEDEED F+ + D E
Sbjct: 1 MRLDTDD---DDREPLDGDDVDGHNMGDEEDEED---------GLFLRFRIRNCDTWMET 60
Query: 61 VEEREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNL 120
+E E+ D EEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNL
Sbjct: 61 KDEAEECD--------MAYLEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNL 120
Query: 121 EPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDE 180
EPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDE
Sbjct: 121 EPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDE 180
Query: 181 MADFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD 240
MADFIVDEE DE GAP+RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD
Sbjct: 181 MADFIVDEEEDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD 240
Query: 241 THEWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEA 300
T EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPP +DASLDDEA
Sbjct: 241 TQEWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEA 300
Query: 301 SWIHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK 360
SWIHGHIANGMNSLF NASG+DLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK
Sbjct: 301 SWIHGHIANGMNSLFSNASGQDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK 360
Query: 361 DTEHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTA 420
D EHEAGDDQDKNDKAPTLRWHK+LWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTA
Sbjct: 361 DIEHEAGDDQDKNDKAPTLRWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTA 420
Query: 421 EHVTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSL 480
EHVTRT+LNRQLFDSVN+SLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSL
Sbjct: 421 EHVTRTTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSL 480
Query: 481 YSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQ 540
YSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQ
Sbjct: 481 YSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQ 540
Query: 541 AVLKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLRE 600
AVLKGARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLRE
Sbjct: 541 AVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLRE 600
Query: 601 KPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQ 660
KPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQ
Sbjct: 601 KPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQ 660
Query: 661 RKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSD 720
RKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYG NLW+KVS+GPYQHKENDISSD
Sbjct: 661 RKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSD 720
Query: 721 EEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVL 780
EEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVL
Sbjct: 721 EEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVL 780
Query: 781 KFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPR 840
KFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPR
Sbjct: 781 KFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPR 840
Query: 841 LYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTP 900
LYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNPLENFLTP
Sbjct: 841 LYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTP 900
Query: 901 DEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIF 960
DEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIF
Sbjct: 901 DEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIF 960
Query: 961 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKD 1020
TRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKD
Sbjct: 961 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKD 1020
Query: 1021 VFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQ 1080
VFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDK ETFLDIKRELMQ
Sbjct: 1021 VFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQ 1080
Query: 1081 GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLM 1140
GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLM
Sbjct: 1081 GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLM 1140
Query: 1141 KEDYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDP 1200
KEDY DDSREISDLSDRL EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDP
Sbjct: 1141 KEDYADDSREISDLSDRLREGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDP 1200
Query: 1201 YYHEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR 1260
YYHEDRSSLQSEQEKSRKEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR
Sbjct: 1201 YYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR 1260
Query: 1261 PSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD 1320
PSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD
Sbjct: 1261 PSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD 1320
Query: 1321 RYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTY 1380
RYVDPLVAHLKAMLSYRKFRRGTKAEVDELM+IEKSEYPMRI+YGFGISHEHPGTFILTY
Sbjct: 1321 RYVDPLVAHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTY 1380
Query: 1381 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR 1440
IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR
Sbjct: 1381 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR 1440
Query: 1441 SPATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGL 1500
SPATGGSSAASAG PWGGSSH+GGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGL
Sbjct: 1441 SPATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGL 1500
Query: 1501 PRPYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEA 1560
PRPYGGRGRGRGSYNNNRGNN+RSDS YDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEA
Sbjct: 1501 PRPYGGRGRGRGSYNNNRGNNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEA 1560
Query: 1561 FPGGWSSGGS---GGGGNGWSDSNGGGGGGGGGSGGSWGGTGGNSKGNWGGSGASNSGGW 1618
FPGGWSSGGS GGGGNGW+DS GG GGG G GG WGGTGGNSKGNWGGSG SNSGGW
Sbjct: 1561 FPGGWSSGGSGGGGGGGNGWNDSTGGSGGGSG--GGGWGGTGGNSKGNWGGSGGSNSGGW 1600
BLAST of Lsi08G000550 vs. ExPASy TrEMBL
Match:
A0A6J1D721 (Transcription elongation factor spt6 OS=Momordica charantia OX=3673 GN=LOC111018212 PE=3 SV=1)
HSP 1 Score: 2925.2 bits (7582), Expect = 0.0e+00
Identity = 1517/1617 (93.82%), Postives = 1567/1617 (96.91%), Query Frame = 0
Query: 4 EDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVEERE 63
E+D+ ELDDREPLDG+DVD HNM D+EDE+DEEG+DEYEKDGFIVDD++EEDEEDVEERE
Sbjct: 9 EEDEVELDDREPLDGEDVDRHNMEDDEDEDDEEGQDEYEKDGFIVDDIDEEDEEDVEERE 68
Query: 64 DSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGF 123
DSD+ERQKKKKRKKKEEYVLDEDDYELLEDNNI+IQRPKGSKKFKRLKKA+RDN+EPSGF
Sbjct: 69 DSDEERQKKKKRKKKEEYVLDEDDYELLEDNNITIQRPKGSKKFKRLKKAQRDNVEPSGF 128
Query: 124 SDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFI 183
SDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEED DIGDEDEMADFI
Sbjct: 129 SDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDVDIGDEDEMADFI 188
Query: 184 VDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWR 243
VDEEVDE GAP+RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD+HEW
Sbjct: 189 VDEEVDEDGAPVRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDSHEWH 248
Query: 244 EKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASWIHG 303
EKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTG PP+++ SL+DE SWIHG
Sbjct: 249 EKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGPPPMDEISLEDETSWIHG 308
Query: 304 HIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE 363
H+ANG NSLFG ASG+DLSV KDDILR+LDLVH+QKLDIPFI MYRKEEILSLLKDT+HE
Sbjct: 309 HLANGTNSLFGTASGQDLSVVKDDILRFLDLVHIQKLDIPFITMYRKEEILSLLKDTQHE 368
Query: 364 AGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTR 423
A DDQ KN+KAPTL+WHKILWAIQ+LDKKWLLLQKRK ALQSYY R+ EE R TR
Sbjct: 369 AVDDQGKNEKAPTLKWHKILWAIQELDKKWLLLQKRKNALQSYYSKRFEEESRRIYDETR 428
Query: 424 TSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS 483
SLN QLF+SV KSL+AAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS
Sbjct: 429 LSLNNQLFESVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS 488
Query: 484 KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKG 543
KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFE+PQAVLKG
Sbjct: 489 KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFETPQAVLKG 548
Query: 544 ARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSR 603
ARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSR
Sbjct: 549 ARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSR 608
Query: 604 FEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLIL 663
FEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLI+DFNEYYLSDGVSKSAQLWNEQRKLIL
Sbjct: 609 FEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLITDFNEYYLSDGVSKSAQLWNEQRKLIL 668
Query: 664 QDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEEAAP 723
QDALSGFLLPSMEKEARSLM S+AK WLLMEYG +LWNK+SVGPYQHKENDISSDEEAAP
Sbjct: 669 QDALSGFLLPSMEKEARSLMNSRAKNWLLMEYGKSLWNKISVGPYQHKENDISSDEEAAP 728
Query: 724 RVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTD 783
RVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTD
Sbjct: 729 RVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTD 788
Query: 784 HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS 843
HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS
Sbjct: 789 HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS 848
Query: 844 RISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDEKYG 903
RISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPG+EILSWKLNPLENF+TPDEKYG
Sbjct: 849 RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGKEILSWKLNPLENFMTPDEKYG 908
Query: 904 MVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF 963
MVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF
Sbjct: 909 MVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF 968
Query: 964 VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED 1023
VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED
Sbjct: 969 VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED 1028
Query: 1024 VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGFQDW 1083
VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYA SKKREDKRETFLDIKRELM GFQDW
Sbjct: 1029 VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAASKKREDKRETFLDIKRELMHGFQDW 1088
Query: 1084 RKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYV 1143
RKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKV GQ+AICGLESGLTGMLMKED+
Sbjct: 1089 RKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVQGQRAICGLESGLTGMLMKEDFA 1148
Query: 1144 DDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHED 1203
DDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNR+QIT++LDPYYHED
Sbjct: 1149 DDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRNQITRDLDPYYHED 1208
Query: 1204 RSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG 1263
RSSLQSEQEKSRKEKELAK+HFKPRMIVHPRF+NITADEAME LSDKDPGESIVRPSSRG
Sbjct: 1209 RSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFKNITADEAMEFLSDKDPGESIVRPSSRG 1268
Query: 1264 PSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP 1323
PSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP
Sbjct: 1269 PSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP 1328
Query: 1324 LVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN 1383
LV+HLKAMLSYRKFRRGTKAEVDELM+IEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN
Sbjct: 1329 LVSHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN 1388
Query: 1384 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATG 1443
PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQ+DSAPSIRSVAAMVPMRSPATG
Sbjct: 1389 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQNDSAPSIRSVAAMVPMRSPATG 1448
Query: 1444 GSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYG 1503
GSSAASAG PWGGSSHDGGWRSQS DRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYG
Sbjct: 1449 GSSAASAGSPWGGSSHDGGWRSQSSDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPYG 1508
Query: 1504 GRGRGRGSYNNNRG---NNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1563
GRGRGRGSYNNNRG NNER DSSYDGSRWDS+SKDGDDGLSNFPGAKIQNSPGKEAFP
Sbjct: 1509 GRGRGRGSYNNNRGNNVNNERQDSSYDGSRWDSTSKDGDDGLSNFPGAKIQNSPGKEAFP 1568
Query: 1564 GGWSSGGSGGGGNGWSDSNGGGGGGGGGSGGSWGGTGGNSKGNWGGSGASNSGGWGS 1618
GGW SGGSGGGGNGWSDS GG GGGG GG WGG+GGNSKGNWGGSGASNSGGWGS
Sbjct: 1569 GGWGSGGSGGGGNGWSDS---GGDGGGGGGGGWGGSGGNSKGNWGGSGASNSGGWGS 1622
BLAST of Lsi08G000550 vs. ExPASy TrEMBL
Match:
A0A6J1EUY6 (Transcription elongation factor spt6 OS=Cucurbita moschata OX=3662 GN=LOC111436171 PE=3 SV=1)
HSP 1 Score: 2921.7 bits (7573), Expect = 0.0e+00
Identity = 1517/1619 (93.70%), Postives = 1561/1619 (96.42%), Query Frame = 0
Query: 4 EDDDAELDDREPLDGDDVDGHNM---GDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 63
++D+ EL+DREPLDGDDVDGHNM DE+DEEDEE +DEYEKDGFIVDD+EEEDEEDVE
Sbjct: 9 DEDEVELEDREPLDGDDVDGHNMRDEDDEDDEEDEEEQDEYEKDGFIVDDIEEEDEEDVE 68
Query: 64 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 123
EREDSDDE+Q+KKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDN+EP
Sbjct: 69 EREDSDDEKQRKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNVEP 128
Query: 124 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 183
SGFSDDEDF+ESSRGGRTAEEKLKRSLFGDDEAPLEDIAEE EQPEEEED DIGDEDEMA
Sbjct: 129 SGFSDDEDFIESSRGGRTAEEKLKRSLFGDDEAPLEDIAEELEQPEEEEDVDIGDEDEMA 188
Query: 184 DFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTH 243
DFIVDEEVDE GAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTH
Sbjct: 189 DFIVDEEVDEDGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTH 248
Query: 244 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASW 303
EWRE RLEDEFEPIVISEKYMTEKDDQIREID+PERMQISEESTGSPP+++ SLDDEASW
Sbjct: 249 EWRENRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGSPPMDEMSLDDEASW 308
Query: 304 IHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDT 363
IHGHIANGMNSLFGNASG+DLSVTKDDIL++LDLVHVQKLDIPFIAMYRKEEILSLLKDT
Sbjct: 309 IHGHIANGMNSLFGNASGQDLSVTKDDILQFLDLVHVQKLDIPFIAMYRKEEILSLLKDT 368
Query: 364 EHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 423
EH+AG+DQDKNDK PTL+WHK+LWAIQDLDKKWLLLQKRKKAL YY+ R+ EE+R +
Sbjct: 369 EHDAGNDQDKNDKTPTLKWHKVLWAIQDLDKKWLLLQKRKKALHLYYRKRFEEELRRDDD 428
Query: 424 VTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 483
VTR SLN QLF+SV KSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS
Sbjct: 429 VTRQSLNSQLFESVKKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 488
Query: 484 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 543
ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV
Sbjct: 489 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 548
Query: 544 LKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 603
LKGARHMAA+EISCEPCVRKHVRSYFMDYAVIST+PT DGN AIDSFHQFSVVKWLREKP
Sbjct: 549 LKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTNPTSDGNAAIDSFHQFSVVKWLREKP 608
Query: 604 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 663
LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLI+DFNEYYLSDGVSKSAQLWNEQRK
Sbjct: 609 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQLWNEQRK 668
Query: 664 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEE 723
LILQDALSGFLLPSMEKEARS+MTSKAKKWLL EYG NLWNK+SVGPYQHKENDISSDEE
Sbjct: 669 LILQDALSGFLLPSMEKEARSVMTSKAKKWLLTEYGKNLWNKISVGPYQHKENDISSDEE 728
Query: 724 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 783
AAPRVMACCWGPGKPATTFVMLDS+GEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF
Sbjct: 729 AAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 788
Query: 784 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 843
MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY
Sbjct: 789 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 848
Query: 844 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDE 903
ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNP ENFLTPDE
Sbjct: 849 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPFENFLTPDE 908
Query: 904 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 963
KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR
Sbjct: 909 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 968
Query: 964 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1023
KDFVT HGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF
Sbjct: 969 KDFVTVHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1028
Query: 1024 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGF 1083
DED+KGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKK EDKRETFLDIKREL+QGF
Sbjct: 1029 DEDIKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKWEDKRETFLDIKRELLQGF 1088
Query: 1084 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1143
QDWRKQYEEP+QDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE
Sbjct: 1089 QDWRKQYEEPNQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1148
Query: 1144 DYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1203
DY D SREISDLS+RLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQIT+NLDPYY
Sbjct: 1149 DYADGSREISDLSERLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITRNLDPYY 1208
Query: 1204 HEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1263
HEDRS LQSEQEKS+KEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS
Sbjct: 1209 HEDRSRLQSEQEKSQKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1268
Query: 1264 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1323
SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIG+DTFEDLDEVMDRY
Sbjct: 1269 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGDDTFEDLDEVMDRY 1328
Query: 1324 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1383
VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR
Sbjct: 1329 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1388
Query: 1384 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1443
STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP
Sbjct: 1389 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1448
Query: 1444 ATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR 1503
ATGGSSAASAG PWGGSSHDG WRSQS+DRDRSSTPGSRTGRNDNRNS GRDGHPSGLPR
Sbjct: 1449 ATGGSSAASAGSPWGGSSHDGSWRSQSYDRDRSSTPGSRTGRNDNRNSSGRDGHPSGLPR 1508
Query: 1504 PYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1563
PYGGRGRGRGSYNNNRGNNER DSSYDGSRWDSSSKDGDDGLSNFPGAK QNSPGKEAFP
Sbjct: 1509 PYGGRGRGRGSYNNNRGNNERPDSSYDGSRWDSSSKDGDDGLSNFPGAKTQNSPGKEAFP 1568
Query: 1564 GGWSSGGS--GGGGNGWSDSNGGGGGGGGGSGGSWGGTGGNSKGNWGGSGASNSGGWGS 1618
GGWS+GGS GGGGNGWSDS GGGGGG WGGTG +S G NSGGWGS
Sbjct: 1569 GGWSAGGSSGGGGGNGWSDSKGGGGGG-------WGGTGASSVG--------NSGGWGS 1612
BLAST of Lsi08G000550 vs. NCBI nr
Match:
XP_008441794.1 (PREDICTED: transcription elongation factor SPT6 [Cucumis melo])
HSP 1 Score: 3023.8 bits (7838), Expect = 0.0e+00
Identity = 1576/1620 (97.28%), Postives = 1593/1620 (98.33%), Query Frame = 0
Query: 1 MRLEDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
MRL+ DD DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE
Sbjct: 1 MRLDTDD---DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
Query: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP
Sbjct: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
Query: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA
Sbjct: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
Query: 181 DFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTH 240
DFIVDEE DE GAP+RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDT
Sbjct: 181 DFIVDEEEDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQ 240
Query: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASW 300
EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPP +DASLDDEASW
Sbjct: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASW 300
Query: 301 IHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDT 360
IHGHIANGMNSLF NASG+DLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKD
Sbjct: 301 IHGHIANGMNSLFSNASGQDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDI 360
Query: 361 EHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
EHEAGDDQDKNDKAPTLRWHK+LWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH
Sbjct: 361 EHEAGDDQDKNDKAPTLRWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
Query: 421 VTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
VTRT+LNRQLFDSVN+SLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS
Sbjct: 421 VTRTTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
Query: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV
Sbjct: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
Query: 541 LKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 600
LKGARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP
Sbjct: 541 LKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 600
Query: 601 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK
Sbjct: 601 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
Query: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEE 720
LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYG NLW+KVS+GPYQHKENDISSDEE
Sbjct: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEE 720
Query: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF
Sbjct: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
Query: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY
Sbjct: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
Query: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDE 900
ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNPLENFLTPDE
Sbjct: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDE 900
Query: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR
Sbjct: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
Query: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF
Sbjct: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
Query: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGF 1080
DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDK ETFLDIKRELMQGF
Sbjct: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGF 1080
Query: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE
Sbjct: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
Query: 1141 DYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
DY DDSREISDLSDRL EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY
Sbjct: 1141 DYADDSREISDLSDRLREGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
Query: 1201 HEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
HEDRSSLQSEQEKSRKEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS
Sbjct: 1201 HEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
Query: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY
Sbjct: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
Query: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1380
VDPLVAHLKAMLSYRKFRRGTKAEVDELM+IEKSEYPMRI+YGFGISHEHPGTFILTYIR
Sbjct: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTYIR 1380
Query: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP
Sbjct: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
Query: 1441 ATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR 1500
ATGGSSAASAG PWGGSSH+GGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR
Sbjct: 1441 ATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR 1500
Query: 1501 PYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1560
PYGGRGRGRGSYNNNRGNN+RSDS YDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP
Sbjct: 1501 PYGGRGRGRGSYNNNRGNNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1560
Query: 1561 GGWSSGGS---GGGGNGWSDSNGGGGGGGGGSGGSWGGTGGNSKGNWGGSGASNSGGWGS 1618
GGWSSGGS GGGGNGW+DS GG GGG G GG WGGTGGNSKGNWGGSG SNSGGWGS
Sbjct: 1561 GGWSSGGSGGGGGGGNGWNDSTGGSGGGSG--GGGWGGTGGNSKGNWGGSGGSNSGGWGS 1615
BLAST of Lsi08G000550 vs. NCBI nr
Match:
XP_038889402.1 (LOW QUALITY PROTEIN: transcription elongation factor SPT6 homolog [Benincasa hispida])
HSP 1 Score: 3010.3 bits (7803), Expect = 0.0e+00
Identity = 1575/1616 (97.46%), Postives = 1590/1616 (98.39%), Query Frame = 0
Query: 4 EDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVEERE 63
E+D+ ELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVEERE
Sbjct: 9 EEDEVELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVEERE 68
Query: 64 DSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGF 123
DSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGF
Sbjct: 69 DSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGF 128
Query: 124 SDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFI 183
SDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFI
Sbjct: 129 SDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFI 188
Query: 184 VDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWR 243
VDEEVDE GAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWR
Sbjct: 189 VDEEVDEDGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWR 248
Query: 244 EKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASWIHG 303
EKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPP+NDASLDDEASWIHG
Sbjct: 249 EKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPMNDASLDDEASWIHG 308
Query: 304 HIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE 363
HIANGM LFG+ASG+DLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE
Sbjct: 309 HIANGMYPLFGDASGQDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE 368
Query: 364 AGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTR 423
AGDDQDKNDK PTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTR
Sbjct: 369 AGDDQDKNDKTPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTR 428
Query: 424 TSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS 483
TSLNRQLFDSVNKSLEAAESEREVDDVD KFNLHFPPGEVGVDEGQFKRPKRKSLYSICS
Sbjct: 429 TSLNRQLFDSVNKSLEAAESEREVDDVDLKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS 488
Query: 484 KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKG 543
KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKG
Sbjct: 489 KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKG 548
Query: 544 ARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSR 603
ARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSR
Sbjct: 549 ARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSR 608
Query: 604 FEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLIL 663
FEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLIL
Sbjct: 609 FEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLIL 668
Query: 664 QDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEEAAP 723
QDALSGFLLPSMEKEARSLMTSKAKKWLLMEYG NLWNKVSVGPYQHKENDISSDEEAAP
Sbjct: 669 QDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWNKVSVGPYQHKENDISSDEEAAP 728
Query: 724 RVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTD 783
RVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTD
Sbjct: 729 RVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTD 788
Query: 784 HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS 843
HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS
Sbjct: 789 HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS 848
Query: 844 RISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDEKYG 903
RISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNPLENFLTPDEKYG
Sbjct: 849 RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDEKYG 908
Query: 904 MVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF 963
MVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF
Sbjct: 909 MVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF 968
Query: 964 VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED 1023
VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED
Sbjct: 969 VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED 1028
Query: 1024 VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGFQDW 1083
VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGFQDW
Sbjct: 1029 VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGFQDW 1088
Query: 1084 RKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYV 1143
RKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDY
Sbjct: 1089 RKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYA 1148
Query: 1144 DDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHED 1203
DDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHED
Sbjct: 1149 DDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHED 1208
Query: 1204 RSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG 1263
RSSLQSEQEKSRKEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG
Sbjct: 1209 RSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG 1268
Query: 1264 PSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP 1323
PSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP
Sbjct: 1269 PSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP 1328
Query: 1324 LVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTN 1383
LV+HLKAMLSYRKFRRGTKAEVDELM+IEKSEYPMRIVYGF ISHEHPGTFILTYIRSTN
Sbjct: 1329 LVSHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIVYGFWISHEHPGTFILTYIRSTN 1388
Query: 1384 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPM-RSPAT 1443
PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRS AAMVPM R+ T
Sbjct: 1389 PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSFAAMVPMARALQT 1448
Query: 1444 GGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPRPY 1503
GGSSAASAG PWGGSSHDGGWRSQSFDRDRSSTPGSRTGR+DNRNSGGRDGHPSGLPRPY
Sbjct: 1449 GGSSAASAGSPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRHDNRNSGGRDGHPSGLPRPY 1508
Query: 1504 GGRGRGRGSYNNNRGNNERSDSSYD-GSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFPG 1563
GGRGRGRGSYNNNRGNN+RSDSSYD GSRWDSSSKDGDDGLSNFPGAKIQNS + + G
Sbjct: 1509 GGRGRGRGSYNNNRGNNDRSDSSYDGGSRWDSSSKDGDDGLSNFPGAKIQNSHRQRSLSG 1568
Query: 1564 GWSSGGSGGGGNGWSDSNGGGGGGGGGSGGSWGGTGGNSKGNWGGSGASNSGGWGS 1618
GWSS GSGGGGNGWS+SNGGGGGGGG G WGGTGGNSKGNWGGSGASNSGGWGS
Sbjct: 1569 GWSS-GSGGGGNGWSESNGGGGGGGG--XGCWGGTGGNSKGNWGGSGASNSGGWGS 1621
BLAST of Lsi08G000550 vs. NCBI nr
Match:
KAE8651717.1 (hypothetical protein Csa_006189 [Cucumis sativus])
HSP 1 Score: 3005.3 bits (7790), Expect = 0.0e+00
Identity = 1568/1629 (96.26%), Postives = 1592/1629 (97.73%), Query Frame = 0
Query: 1 MRLEDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
MRL+ D+ DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE
Sbjct: 156 MRLDTDE---DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 215
Query: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP
Sbjct: 216 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 275
Query: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA
Sbjct: 276 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 335
Query: 181 DFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTH 240
DFIVDEE DE GAP+RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDT
Sbjct: 336 DFIVDEEEDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQ 395
Query: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASW 300
EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPP +DASLDDEASW
Sbjct: 396 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASW 455
Query: 301 IHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDT 360
IHGHIANG++SL NASG+DLSVTKDDILRYLDLVHVQKLDIPFI+MYRKEEILSLLKDT
Sbjct: 456 IHGHIANGVSSLSSNASGQDLSVTKDDILRYLDLVHVQKLDIPFISMYRKEEILSLLKDT 515
Query: 361 EHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
EHEAGDDQDKNDKAPTLRWHK+LWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH
Sbjct: 516 EHEAGDDQDKNDKAPTLRWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 575
Query: 421 VTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
VTRT+LNRQLFDSVN+SLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS
Sbjct: 576 VTRTTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 635
Query: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV
Sbjct: 636 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 695
Query: 541 LKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 600
LKGARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPT DGNVAIDSFHQFSVVKWLREKP
Sbjct: 696 LKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTADGNVAIDSFHQFSVVKWLREKP 755
Query: 601 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
L+RFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK
Sbjct: 756 LNRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 815
Query: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEE 720
LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYG NLW+KVS+GPYQHKENDISSDEE
Sbjct: 816 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEE 875
Query: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF
Sbjct: 876 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 935
Query: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY
Sbjct: 936 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 995
Query: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDE 900
ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNPLENFLTPDE
Sbjct: 996 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDE 1055
Query: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR
Sbjct: 1056 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 1115
Query: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF
Sbjct: 1116 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1175
Query: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGF 1080
DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDK ETFLDIKRELMQGF
Sbjct: 1176 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGF 1235
Query: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE
Sbjct: 1236 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1295
Query: 1141 DYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
DY DDSR+ISDLSDRL EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY
Sbjct: 1296 DYADDSRDISDLSDRLREGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1355
Query: 1201 HEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
HEDRSSLQSEQEKSRKEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS
Sbjct: 1356 HEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1415
Query: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY
Sbjct: 1416 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1475
Query: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1380
VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRI+YGFGISHEHPGTFILTYIR
Sbjct: 1476 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIIYGFGISHEHPGTFILTYIR 1535
Query: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP
Sbjct: 1536 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1595
Query: 1441 ATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR 1500
ATGGSSAASAG PWGGSSH+GGWRSQSFDRDRSSTPGSRTGRNDNRNS GRDGHPSGLPR
Sbjct: 1596 ATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSSGRDGHPSGLPR 1655
Query: 1501 PYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1560
PYGGRGRGRGSYNNNRGNN+RSDS YDGSRWDSSSKDGDDGLSNFPGAKI NSPGKEAFP
Sbjct: 1656 PYGGRGRGRGSYNNNRGNNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIHNSPGKEAFP 1715
Query: 1561 GGWSSGGSGGGGNGWSDSNGGGGGGGGG------------SGGSWGGTGGNSKGNWGGSG 1618
GGWSSGG GGGGNGW++S+GGGGGGGGG GG WGGTGGNSKGNW GSG
Sbjct: 1716 GGWSSGG-GGGGNGWNESSGGGGGGGGGGGSGSGGGGSGSGGGGWGGTGGNSKGNWSGSG 1775
BLAST of Lsi08G000550 vs. NCBI nr
Match:
XP_011649014.1 (transcription elongation factor SPT6 homolog [Cucumis sativus])
HSP 1 Score: 3005.3 bits (7790), Expect = 0.0e+00
Identity = 1568/1629 (96.26%), Postives = 1592/1629 (97.73%), Query Frame = 0
Query: 1 MRLEDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
MRL+ D+ DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE
Sbjct: 1 MRLDTDE---DDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVE 60
Query: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP
Sbjct: 61 EREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEP 120
Query: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA
Sbjct: 121 SGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMA 180
Query: 181 DFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTH 240
DFIVDEE DE GAP+RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDT
Sbjct: 181 DFIVDEEEDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQ 240
Query: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASW 300
EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPP +DASLDDEASW
Sbjct: 241 EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASW 300
Query: 301 IHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDT 360
IHGHIANG++SL NASG+DLSVTKDDILRYLDLVHVQKLDIPFI+MYRKEEILSLLKDT
Sbjct: 301 IHGHIANGVSSLSSNASGQDLSVTKDDILRYLDLVHVQKLDIPFISMYRKEEILSLLKDT 360
Query: 361 EHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
EHEAGDDQDKNDKAPTLRWHK+LWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH
Sbjct: 361 EHEAGDDQDKNDKAPTLRWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEH 420
Query: 421 VTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
VTRT+LNRQLFDSVN+SLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS
Sbjct: 421 VTRTTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYS 480
Query: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV
Sbjct: 481 ICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAV 540
Query: 541 LKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKP 600
LKGARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPT DGNVAIDSFHQFSVVKWLREKP
Sbjct: 541 LKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTADGNVAIDSFHQFSVVKWLREKP 600
Query: 601 LSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
L+RFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK
Sbjct: 601 LNRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRK 660
Query: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEE 720
LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYG NLW+KVS+GPYQHKENDISSDEE
Sbjct: 661 LILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEE 720
Query: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF
Sbjct: 721 AAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKF 780
Query: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY
Sbjct: 781 MTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLY 840
Query: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDE 900
ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNPLENFLTPDE
Sbjct: 841 ENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDE 900
Query: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR
Sbjct: 901 KYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTR 960
Query: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF
Sbjct: 961 KDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVF 1020
Query: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGF 1080
DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDK ETFLDIKRELMQGF
Sbjct: 1021 DEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGF 1080
Query: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE
Sbjct: 1081 QDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKE 1140
Query: 1141 DYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
DY DDSR+ISDLSDRL EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY
Sbjct: 1141 DYADDSRDISDLSDRLREGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYY 1200
Query: 1201 HEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
HEDRSSLQSEQEKSRKEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS
Sbjct: 1201 HEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPS 1260
Query: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY
Sbjct: 1261 SRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRY 1320
Query: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIR 1380
VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRI+YGFGISHEHPGTFILTYIR
Sbjct: 1321 VDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIIYGFGISHEHPGTFILTYIR 1380
Query: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP
Sbjct: 1381 STNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSP 1440
Query: 1441 ATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGLPR 1500
ATGGSSAASAG PWGGSSH+GGWRSQSFDRDRSSTPGSRTGRNDNRNS GRDGHPSGLPR
Sbjct: 1441 ATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSSGRDGHPSGLPR 1500
Query: 1501 PYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEAFP 1560
PYGGRGRGRGSYNNNRGNN+RSDS YDGSRWDSSSKDGDDGLSNFPGAKI NSPGKEAFP
Sbjct: 1501 PYGGRGRGRGSYNNNRGNNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIHNSPGKEAFP 1560
Query: 1561 GGWSSGGSGGGGNGWSDSNGGGGGGGGG------------SGGSWGGTGGNSKGNWGGSG 1618
GGWSSGG GGGGNGW++S+GGGGGGGGG GG WGGTGGNSKGNW GSG
Sbjct: 1561 GGWSSGG-GGGGNGWNESSGGGGGGGGGGGSGSGGGGSGSGGGGWGGTGGNSKGNWSGSG 1620
BLAST of Lsi08G000550 vs. NCBI nr
Match:
TYK28898.1 (transcription elongation factor SPT6 [Cucumis melo var. makuwa])
HSP 1 Score: 2930.6 bits (7596), Expect = 0.0e+00
Identity = 1538/1622 (94.82%), Postives = 1559/1622 (96.12%), Query Frame = 0
Query: 1 MRLEDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDE--ED 60
MRL+ DD DDREPLDGDDVDGHNMGDEEDEED F+ + D E
Sbjct: 1 MRLDTDD---DDREPLDGDDVDGHNMGDEEDEED---------GLFLRFRIRNCDTWMET 60
Query: 61 VEEREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNL 120
+E E+ D EEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNL
Sbjct: 61 KDEAEECD--------MAYLEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNL 120
Query: 121 EPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDE 180
EPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDE
Sbjct: 121 EPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDE 180
Query: 181 MADFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD 240
MADFIVDEE DE GAP+RR+KLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD
Sbjct: 181 MADFIVDEEEDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD 240
Query: 241 THEWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEA 300
T EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPP +DASLDDEA
Sbjct: 241 TQEWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEA 300
Query: 301 SWIHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK 360
SWIHGHIANGMNSLF NASG+DLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK
Sbjct: 301 SWIHGHIANGMNSLFSNASGQDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK 360
Query: 361 DTEHEAGDDQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTA 420
D EHEAGDDQDKNDKAPTLRWHK+LWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTA
Sbjct: 361 DIEHEAGDDQDKNDKAPTLRWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTA 420
Query: 421 EHVTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSL 480
EHVTRT+LNRQLFDSVN+SLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSL
Sbjct: 421 EHVTRTTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSL 480
Query: 481 YSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQ 540
YSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQ
Sbjct: 481 YSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQ 540
Query: 541 AVLKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLRE 600
AVLKGARHMAA+EISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLRE
Sbjct: 541 AVLKGARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLRE 600
Query: 601 KPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQ 660
KPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQ
Sbjct: 601 KPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQ 660
Query: 661 RKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSD 720
RKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYG NLW+KVS+GPYQHKENDISSD
Sbjct: 661 RKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSD 720
Query: 721 EEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVL 780
EEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVL
Sbjct: 721 EEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVL 780
Query: 781 KFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPR 840
KFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPR
Sbjct: 781 KFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPR 840
Query: 841 LYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTP 900
LYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAM ATLCGPGREILSWKLNPLENFLTP
Sbjct: 841 LYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTP 900
Query: 901 DEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIF 960
DEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIF
Sbjct: 901 DEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIF 960
Query: 961 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKD 1020
TRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKD
Sbjct: 961 TRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKD 1020
Query: 1021 VFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQ 1080
VFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDK ETFLDIKRELMQ
Sbjct: 1021 VFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQ 1080
Query: 1081 GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLM 1140
GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLM
Sbjct: 1081 GFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLM 1140
Query: 1141 KEDYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDP 1200
KEDY DDSREISDLSDRL EGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDP
Sbjct: 1141 KEDYADDSREISDLSDRLREGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDP 1200
Query: 1201 YYHEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR 1260
YYHEDRSSLQSEQEKSRKEKELAK+HFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR
Sbjct: 1201 YYHEDRSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVR 1260
Query: 1261 PSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD 1320
PSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD
Sbjct: 1261 PSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMD 1320
Query: 1321 RYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTY 1380
RYVDPLVAHLKAMLSYRKFRRGTKAEVDELM+IEKSEYPMRI+YGFGISHEHPGTFILTY
Sbjct: 1321 RYVDPLVAHLKAMLSYRKFRRGTKAEVDELMRIEKSEYPMRIIYGFGISHEHPGTFILTY 1380
Query: 1381 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR 1440
IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR
Sbjct: 1381 IRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMR 1440
Query: 1441 SPATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGL 1500
SPATGGSSAASAG PWGGSSH+GGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGL
Sbjct: 1441 SPATGGSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPSGL 1500
Query: 1501 PRPYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEA 1560
PRPYGGRGRGRGSYNNNRGNN+RSDS YDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEA
Sbjct: 1501 PRPYGGRGRGRGSYNNNRGNNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGKEA 1560
Query: 1561 FPGGWSSGGS---GGGGNGWSDSNGGGGGGGGGSGGSWGGTGGNSKGNWGGSGASNSGGW 1618
FPGGWSSGGS GGGGNGW+DS GG GGG G GG WGGTGGNSKGNWGGSG SNSGGW
Sbjct: 1561 FPGGWSSGGSGGGGGGGNGWNDSTGGSGGGSG--GGGWGGTGGNSKGNWGGSGGSNSGGW 1600
BLAST of Lsi08G000550 vs. TAIR 10
Match:
AT1G65440.2 (global transcription factor group B1 )
HSP 1 Score: 2018.4 bits (5228), Expect = 0.0e+00
Identity = 1102/1577 (69.88%), Postives = 1274/1577 (80.79%), Query Frame = 0
Query: 4 EDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIV-DDVEEEDEEDVEER 63
ED + E DD EP+ GD + H+ D+E+++D+ G +EYE DGFIV D+ EEE+EE+ EER
Sbjct: 11 EDHELEDDDGEPVHGDPAE-HDENDDEEDDDDVG-NEYENDGFIVNDEDEEEEEEEDEER 70
Query: 64 EDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSG 123
+DSD+ERQKKKK++KK++ LDEDDY LL+DNN+ ++ +++KRLKKA+R+ G
Sbjct: 71 KDSDEERQKKKKKRKKKDEGLDEDDYLLLQDNNVKFKK----RQYKRLKKAQREQGNGQG 130
Query: 124 FSDDEDFVESSRGG--RTAEEKLKRSLFGDDEA--PLEDIAEEEEQPEEEEDADIGDEDE 183
S D++F SRGG R+AE+K+K LF D + P +D+ +EE+ EE+ +G EDE
Sbjct: 131 ESSDDEF--DSRGGTRRSAEDKIKDRLFDDVDVDDPPDDVGDEEDLVVEED--VVGSEDE 190
Query: 184 MADFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD 243
MADFIVDE+ DE G P +R KKKK RQ G TA+++A+EIFGDVDELL +RK+ L
Sbjct: 191 MADFIVDED-DEHGPP-KRGNSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLA 250
Query: 244 THEWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEA 303
+++ E+RLEDEFEP V+SEKYMT DD+IR++DIPERMQISEESTGSPP+++ S+++E+
Sbjct: 251 SNQRMERRLEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEES 310
Query: 304 SWIHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK 363
+WI+ +A+ + G GR SV KDDI ++L+L HVQKL+IPFIAMYRKE+ SLL
Sbjct: 311 NWIYAQLASQLRESDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL- 370
Query: 364 DTEHEAGD-DQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRT 423
+ GD D K P +WHK+ W I DLDKKWLLL+KRK AL YY RY EE R
Sbjct: 371 ----DTGDFDGANQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRR 430
Query: 424 AEHVTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKS 483
TR +LN+ LF+SV KSL+ AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS
Sbjct: 431 VYDETRLNLNQYLFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKS 490
Query: 484 LYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESP 543
YSICSKAGLWEVA KFGYS+EQ GL LSLEK+ DELED KETPEEMA NF CAMFE+
Sbjct: 491 QYSICSKAGLWEVANKFGYSAEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENS 550
Query: 544 QAVLKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLR 603
AVLKGARHMAAVEISCEP V+K+VR +M+ AV+STSPT DGN IDSFHQFS +KWLR
Sbjct: 551 LAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLR 610
Query: 604 EKPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNE 663
EKPLS+FE AQWLLIQK EEEKLL VT KLPE ++N+LISD NE+YLS GVSK AQLWNE
Sbjct: 611 EKPLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNE 670
Query: 664 QRKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISS 723
QRKLIL+DAL FLLPSMEKEARSL+TS+AK LL EYG LWNKVS GPYQ KE DI+
Sbjct: 671 QRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINL 730
Query: 724 DEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERV 783
DEEAAPRVMACCWGPGKP TFVMLDSSGEVLDVLY GSLT RSQNVNDQQRKK+DQ+RV
Sbjct: 731 DEEAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRV 790
Query: 784 LKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLP 843
LKFM DHQPHVV LGAVNLSCTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLP
Sbjct: 791 LKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLP 850
Query: 844 RLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLT 903
RLYENSRIS +QL QSG V+RAVALGRYLQNPLAM ATLCGPGREILSWKL+PLENFL
Sbjct: 851 RLYENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQ 910
Query: 904 PDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSI 963
DEKYGMVEQVMVD+TNQVG+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSI
Sbjct: 911 LDEKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSI 970
Query: 964 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAK 1023
F RKD + HGLGKKVFVNA GFLR+RRSGLAASSSQFIDLLDDTRIHPESY+LAQELAK
Sbjct: 971 FVRKDLI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAK 1030
Query: 1024 DVFDEDVKGDANDDEDA-EMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKREL 1083
D++DEDV+GD+NDDEDA EMAIEHVRDRP LR + +DEY SKKRE+K+ET+ +I REL
Sbjct: 1031 DIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIREL 1090
Query: 1084 MQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGM 1143
GFQDWR ++EPS DEEFYMISGETEDT+AEGRIVQA+VR++ +AIC L+SGLTGM
Sbjct: 1091 SCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGM 1150
Query: 1144 LMKEDYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNL 1203
LMKED+ DD R+I DL+D+L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NRHQ QN+
Sbjct: 1151 LMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNV 1210
Query: 1204 DPYYHEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESI 1263
D YYHEDR+SLQ +EK+RKEKEL ++HFK RMIVHPRFQNITAD+A E LSDKD GESI
Sbjct: 1211 DAYYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESI 1270
Query: 1264 VRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEV 1323
VRPSSRG +FLTLTLKIYDGVYAHK+I EGGKE+KDITSL IGKTL IGEDTFEDLDEV
Sbjct: 1271 VRPSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEV 1330
Query: 1324 MDRYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFIL 1383
MDRYVDPLV+HLK ML+YRKFR+GTK+EVD+L++IEK E P RIVY FGISHEHPGTFIL
Sbjct: 1331 MDRYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFIL 1390
Query: 1384 TYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVP 1443
+YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP +SAPSIRS+AA VP
Sbjct: 1391 SYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVP 1450
Query: 1444 MRSPATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPS 1503
MRSPA GS S G WG S +GGW+ S DRS GS G + RN GGRDGHPS
Sbjct: 1451 MRSPADHGS---SGGSGWGSSQSEGGWKGNS---DRS---GSGRG-GEYRNGGGRDGHPS 1510
Query: 1504 GLPRPYGGRGRGRGSYNNNRGNNERSDSSYDGSRWDSSSKDGDDGLSNFPGAKIQNSPGK 1563
G PRPYGGRGRGRG + N++R D + D D+ + D
Sbjct: 1511 GAPRPYGGRGRGRGRGRRDDMNSDRQDGNGDWGNNDTGTAD------------------- 1533
Query: 1564 EAFPGGWSSGGSGGGGN 1574
GGW + G GG G+
Sbjct: 1571 ----GGWGNSGGGGWGS 1533
BLAST of Lsi08G000550 vs. TAIR 10
Match:
AT1G65440.1 (global transcription factor group B1 )
HSP 1 Score: 2015.0 bits (5219), Expect = 0.0e+00
Identity = 1129/1654 (68.26%), Postives = 1303/1654 (78.78%), Query Frame = 0
Query: 4 EDDDAELDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIV-DDVEEEDEEDVEER 63
ED + E DD EP+ GD + H+ D+E+++D+ G +EYE DGFIV D+ EEE+EE+ EER
Sbjct: 11 EDHELEDDDGEPVHGDPAE-HDENDDEEDDDDVG-NEYENDGFIVNDEDEEEEEEEDEER 70
Query: 64 EDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSG 123
+DSD+ERQKKKK++KK++ LDEDDY LL+DNN+ ++ +++KRLKKA+R+ G
Sbjct: 71 KDSDEERQKKKKKRKKKDEGLDEDDYLLLQDNNVKFKK----RQYKRLKKAQREQGNGQG 130
Query: 124 FSDDEDFVESSRGG--RTAEEKLKRSLFGDDEA--PLEDIAEEEEQPEEEEDADIGDEDE 183
S D++F SRGG R+AE+K+K LF D + P +D+ +EE+ EE+ +G EDE
Sbjct: 131 ESSDDEF--DSRGGTRRSAEDKIKDRLFDDVDVDDPPDDVGDEEDLVVEED--VVGSEDE 190
Query: 184 MADFIVDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELD 243
MADFIVDE+ DE G P +R KKKK RQ G TA+++A+EIFGDVDELL +RK+ L
Sbjct: 191 MADFIVDED-DEHGPP-KRGNSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLA 250
Query: 244 THEWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEA 303
+++ E+RLEDEFEP V+SEKYMT DD+IR++DIPERMQISEESTGSPP+++ S+++E+
Sbjct: 251 SNQRMERRLEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEES 310
Query: 304 SWIHGHIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLK 363
+WI+ +A+ + G GR SV KDDI ++L+L HVQKL+IPFIAMYRKE+ SLL
Sbjct: 311 NWIYAQLASQLRESDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL- 370
Query: 364 DTEHEAGD-DQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRT 423
+ GD D K P +WHK+ W I DLDKKWLLL+KRK AL YY RY EE R
Sbjct: 371 ----DTGDFDGANQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRR 430
Query: 424 AEHVTRTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKS 483
TR +LN+ LF+SV KSL+ AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS
Sbjct: 431 VYDETRLNLNQYLFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKS 490
Query: 484 LYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESP 543
YSICSKAGLWEVA KFGYS+EQ GL LSLEK+ DELED KETPEEMA NF CAMFE+
Sbjct: 491 QYSICSKAGLWEVANKFGYSAEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENS 550
Query: 544 QAVLKGARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLR 603
AVLKGARHMAAVEISCEP V+K+VR +M+ AV+STSPT DGN IDSFHQFS +KWLR
Sbjct: 551 LAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLR 610
Query: 604 EKPLSRFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNE 663
EKPLS+FE AQWLLIQK EEEKLL VT KLPE ++N+LISD NE+YLS GVSK AQLWNE
Sbjct: 611 EKPLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNE 670
Query: 664 QRKLILQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISS 723
QRKLIL+DAL FLLPSMEKEARSL+TS+AK LL EYG LWNKVS GPYQ KE DI+
Sbjct: 671 QRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINL 730
Query: 724 DEEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERV 783
DEEAAPRVMACCWGPGKP TFVMLDSSGEVLDVLY GSLT RSQNVNDQQRKK+DQ+RV
Sbjct: 731 DEEAAPRVMACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRV 790
Query: 784 LKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLP 843
LKFM DHQPHVV LGAVNLSCTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLP
Sbjct: 791 LKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLP 850
Query: 844 RLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLT 903
RLYENSRIS +QL QSG V+RAVALGRYLQNPLAM ATLCGPGREILSWKL+PLENFL
Sbjct: 851 RLYENSRISGEQLPQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQ 910
Query: 904 PDEKYGMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSI 963
DEKYGMVEQVMVD+TNQVG+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSI
Sbjct: 911 LDEKYGMVEQVMVDITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSI 970
Query: 964 FTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAK 1023
F RKD + HGLGKKVFVNA GFLR+RRSGLAASSSQFIDLLDDTRIHPESY+LAQELAK
Sbjct: 971 FVRKDLI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAK 1030
Query: 1024 DVFDEDVKGDANDDEDA-EMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKREL 1083
D++DEDV+GD+NDDEDA EMAIEHVRDRP LR + +DEY SKKRE+K+ET+ +I REL
Sbjct: 1031 DIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIREL 1090
Query: 1084 MQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGM 1143
GFQDWR ++EPS DEEFYMISGETEDT+AEGRIVQA+VR++ +AIC L+SGLTGM
Sbjct: 1091 SCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGM 1150
Query: 1144 LMKEDYVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNL 1203
LMKED+ DD R+I DL+D+L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NRHQ QN+
Sbjct: 1151 LMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNV 1210
Query: 1204 DPYYHEDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESI 1263
D YYHEDR+SLQ +EK+RKEKEL ++HFK RMIVHPRFQNITAD+A E LSDKD GESI
Sbjct: 1211 DAYYHEDRNSLQLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESI 1270
Query: 1264 VRPSSRGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEV 1323
VRPSSRG +FLTLTLKIYDGVYAHK+I EGGKE+KDITSL IGKTL IGEDTFEDLDEV
Sbjct: 1271 VRPSSRGLNFLTLTLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEV 1330
Query: 1324 MDRYVDPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFIL 1383
MDRYVDPLV+HLK ML+YRKFR+GTK+EVD+L++IEK E P RIVY FGISHEHPGTFIL
Sbjct: 1331 MDRYVDPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFIL 1390
Query: 1384 TYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVP 1443
+YIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP +SAPSIRS+AA VP
Sbjct: 1391 SYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVP 1450
Query: 1444 MRSPATGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDGHPS 1503
MRSPA GS S G WG S +GGW+ S DRS GS G + RN GGRDGHPS
Sbjct: 1451 MRSPADHGS---SGGSGWGSSQSEGGWKGNS---DRS---GSGRG-GEYRNGGGRDGHPS 1510
Query: 1504 GLPRPYGGRGRGRGSYNNNRGNNERSDSSYD-----------------GSRWDSSSKDGD 1563
G PRPYGGRGRGRG + N++R D + D G W S S
Sbjct: 1511 GAPRPYGGRGRGRGRGRRDDMNSDRQDGNGDWGNNDTGTADGGWGNSGGGGWGSESAGKK 1570
Query: 1564 DGLSNFPGAKIQNSPGKEAFPGGWSSGGSGGGGNGW--------SDSNGGGGGGGGGSGG 1618
G + G ++ K G W SG GGG GW S +GG G G GG G
Sbjct: 1571 TGGGSTGGWGSESGGNKSDGAGSWGSGSGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGS 1630
BLAST of Lsi08G000550 vs. TAIR 10
Match:
AT1G65440.3 (global transcription factor group B1 )
HSP 1 Score: 1952.6 bits (5057), Expect = 0.0e+00
Identity = 1031/1432 (72.00%), Postives = 1183/1432 (82.61%), Query Frame = 0
Query: 68 ERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGFSDDE 127
+++KKKK++KK++ LDEDDY LL+DNN+ ++ +++KRLKKA+R+ G S D+
Sbjct: 45 KKKKKKKKRKKKDEGLDEDDYLLLQDNNVKFKK----RQYKRLKKAQREQGNGQGESSDD 104
Query: 128 DFVESSRGG--RTAEEKLKRSLFGDDEA--PLEDIAEEEEQPEEEEDADIGDEDEMADFI 187
+F SRGG R+AE+K+K LF D + P +D+ +EE+ EE+ +G EDEMADFI
Sbjct: 105 EF--DSRGGTRRSAEDKIKDRLFDDVDVDDPPDDVGDEEDLVVEED--VVGSEDEMADFI 164
Query: 188 VDEEVDERGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWR 247
VDE+ DE G P +R KKKK RQ G TA+++A+EIFGDVDELL +RK+ L +++
Sbjct: 165 VDED-DEHGPP-KRGNSKKKKYRQ--GSDITAMRDANEIFGDVDELLTIRKKGLASNQRM 224
Query: 248 EKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASWIHG 307
E+RLEDEFEP V+SEKYMT DD+IR++DIPERMQISEESTGSPP+++ S+++E++WI+
Sbjct: 225 ERRLEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEESNWIYA 284
Query: 308 HIANGMNSLFGNASGRDLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHE 367
+A+ + G GR SV KDDI ++L+L HVQKL+IPFIAMYRKE+ SLL +
Sbjct: 285 QLASQLRESDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLL-----D 344
Query: 368 AGD-DQDKNDKAPTLRWHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVT 427
GD D K P +WHK+ W I DLDKKWLLL+KRK AL YY RY EE R T
Sbjct: 345 TGDFDGANQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDET 404
Query: 428 RTSLNRQLFDSVNKSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSIC 487
R +LN+ LF+SV KSL+ AE+EREVDDVDSKFNLHFPPGE+GVDEGQ+KRPKRKS YSIC
Sbjct: 405 RLNLNQYLFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSIC 464
Query: 488 SKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLK 547
SKAGLWEVA KFGYS+EQ GL LSLEK+ DELED KETPEEMA NF CAMFE+ AVLK
Sbjct: 465 SKAGLWEVANKFGYSAEQLGLALSLEKL-VDELEDAKETPEEMAKNFVCAMFENSLAVLK 524
Query: 548 GARHMAAVEISCEPCVRKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLS 607
GARHMAAVEISCEP V+K+VR +M+ AV+STSPT DGN IDSFHQFS +KWLREKPLS
Sbjct: 525 GARHMAAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLS 584
Query: 608 RFEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLI 667
+FE AQWLLIQK EEEKLL VT KLPE ++N+LISD NE+YLS GVSK AQLWNEQRKLI
Sbjct: 585 KFEGAQWLLIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQRKLI 644
Query: 668 LQDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEEAA 727
L+DAL FLLPSMEKEARSL+TS+AK LL EYG LWNKVS GPYQ KE DI+ DEEAA
Sbjct: 645 LEDALHAFLLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDEEAA 704
Query: 728 PRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMT 787
PRVMACCWGPGKP TFVMLDSSGEVLDVLY GSLT RSQNVNDQQRKK+DQ+RVLKFM
Sbjct: 705 PRVMACCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMM 764
Query: 788 DHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYEN 847
DHQPHVV LGAVNLSCTRLKDDIYE+IF+MVEE PRDVGH MD LSIVY DESLPRLYEN
Sbjct: 765 DHQPHVVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYEN 824
Query: 848 SRISSDQLQGQSGIVKRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDEKY 907
SRIS +QL QSG V+RAVALGRYLQNPLAM ATLCGPGREILSWKL+PLENFL DEKY
Sbjct: 825 SRISGEQLPQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLDEKY 884
Query: 908 GMVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKD 967
GMVEQVMVD+TNQVG+D NLA SH+W FSPLQFI+GLGPRKAASLQRSLVRAGSIF RKD
Sbjct: 885 GMVEQVMVDITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFVRKD 944
Query: 968 FVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDE 1027
+ HGLGKKVFVNA GFLR+RRSGLAASSSQFIDLLDDTRIHPESY+LAQELAKD++DE
Sbjct: 945 LI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDE 1004
Query: 1028 DVKGDANDDEDA-EMAIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGFQ 1087
DV+GD+NDDEDA EMAIEHVRDRP LR + +DEY SKKRE+K+ET+ +I REL GFQ
Sbjct: 1005 DVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSCGFQ 1064
Query: 1088 DWRKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKED 1147
DWR ++EPS DEEFYMISGETEDT+AEGRIVQA+VR++ +AIC L+SGLTGMLMKED
Sbjct: 1065 DWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKED 1124
Query: 1148 YVDDSREISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYH 1207
+ DD R+I DL+D+L EGDI+TCKIKSIQK RYQVFL+CKESEMR+NRHQ QN+D YYH
Sbjct: 1125 FSDDGRDIVDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDAYYH 1184
Query: 1208 EDRSSLQSEQEKSRKEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSS 1267
EDR+SLQ +EK+RKEKEL ++HFK RMIVHPRFQNITAD+A E LSDKD GESIVRPSS
Sbjct: 1185 EDRNSLQLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVRPSS 1244
Query: 1268 RGPSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYV 1327
RG +FLTLTLKIYDGVYAHK+I EGGKE+KDITSL IGKTL IGEDTFEDLDEVMDRYV
Sbjct: 1245 RGLNFLTLTLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMDRYV 1304
Query: 1328 DPLVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRS 1387
DPLV+HLK ML+YRKFR+GTK+EVD+L++IEK E P RIVY FGISHEHPGTFIL+YIRS
Sbjct: 1305 DPLVSHLKTMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSYIRS 1364
Query: 1388 TNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPA 1447
TNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP +SAPSIRS+AA VPMRSPA
Sbjct: 1365 TNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMRSPA 1424
Query: 1448 TGGSSAASAGGPWGGSSHDGGWRSQSFDRDRSSTPGSRTGRNDNRNSGGRDG 1494
GS S G WG S +GGW+ S DR S G + GGR G
Sbjct: 1425 DHGS---SGGSGWGSSQSEGGWKGNS-DRSGSGRGGEYRNGGWGNSGGGRLG 1453
BLAST of Lsi08G000550 vs. TAIR 10
Match:
AT1G63210.1 (Transcription elongation factor Spt6 )
HSP 1 Score: 1569.3 bits (4062), Expect = 0.0e+00
Identity = 809/1224 (66.09%), Postives = 981/1224 (80.15%), Query Frame = 0
Query: 200 LKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTHEWREKRLEDEFEPIVISEK 259
+++KK + G S AL+ A+++FGD +ELL+LRK++L +E E++LEDEFEP+V+SEK
Sbjct: 1 MRRKKMKYKQGTDSNALRYANDVFGDPEELLKLRKKDLKYNEKIERKLEDEFEPMVLSEK 60
Query: 260 YMTEKDDQIREIDIPERMQISEESTGSPPINDASLDDEASWIHGHIANGMNSLFGNASGR 319
YMTEKDD+IR++D+PERMQI EE+ G ++D S+ +E++WI+ + G+
Sbjct: 61 YMTEKDDEIRKLDVPERMQIFEEAIGIVSLDDMSIQEESNWIYARLL--------QEQGQ 120
Query: 320 DLSVTKDDILRYLDLVHVQKLDIPFIAMYRKEEILSLLKDTEHEAGDDQDKN-DKAPTLR 379
+ KDDI+++L++ HVQKL+IPFIAMYRKE+ SLL D+ + D D N DK +
Sbjct: 121 GCLINKDDIVKFLEMFHVQKLEIPFIAMYRKEQCRSLL-DSSDDDHDGSDFNLDKKLETK 180
Query: 380 WHKILWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTRTSLNRQLFDSVNKSL 439
WHK+LW IQDLD+KW+LL+KRK AL YY R+ EE + LN+ LF+SV KSL
Sbjct: 181 WHKVLWMIQDLDRKWVLLRKRKTALFGYYTKRFEEE------TCMSDLNKSLFESVIKSL 240
Query: 440 EAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICSKAGLWEVAGKFGYSS 499
+AAE+EREVDDVDSKFNLHFP E +DEGQ+KRP RKS YSICSK G+ E A KFGYS+
Sbjct: 241 QAAETEREVDDVDSKFNLHFPHCE--IDEGQYKRPNRKSQYSICSKFGIKEFANKFGYSA 300
Query: 500 EQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKGARHMAAVEISCEPCV 559
EQ GL LSLEK+ DELED K+TPEEMA N+ CAMF QAVLKGARHMAAVEISCEP +
Sbjct: 301 EQLGLALSLEKVFVDELEDAKKTPEEMALNYECAMFGDSQAVLKGARHMAAVEISCEPSI 360
Query: 560 RKHVRSYFMDYAVISTSPTPDGNVAIDSFHQFSVVKWLREKPLSRFEDAQWLLIQKAEEE 619
RK+VR FM+ AV+STSPTPDGNV IDSFH+FS VKWL EKPL +F+ QWLLIQKAEEE
Sbjct: 361 RKYVRGIFMENAVVSTSPTPDGNVVIDSFHRFSAVKWLSEKPLRKFDGVQWLLIQKAEEE 420
Query: 620 KLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLILQDALSGFLLPSMEKE 679
KLL VT KLPE +N++IS+ +E+YLS GVSK AQLWNEQRKLIL+DA+ GF+LPSMEKE
Sbjct: 421 KLLQVTFKLPENQMNRIISECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFVLPSMEKE 480
Query: 680 ARSLMTSKAKKWLLMEYGNNLWNKVSVGPYQHKENDISSDEEAAPRVMACCWGPGKPATT 739
ARSL+TS+AK LL EYG LWNKVS GPY+ N +S+EEAAPRV+ACCWGPG P TT
Sbjct: 481 ARSLLTSRAKTQLLSEYGQVLWNKVSSGPYRRNNN--TSEEEAAPRVLACCWGPGNPETT 540
Query: 740 FVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSC 799
FVMLDSSGE++DVLY+GS+ LRS++VNDQ+RKK DQ+R LKF+ DHQP V+ L AVNLSC
Sbjct: 541 FVMLDSSGELVDVLYSGSIGLRSRDVNDQKRKKMDQDRFLKFIRDHQPDVLALAAVNLSC 600
Query: 800 TRLKDDIYEIIFKMVEENPRD-VGHEMDGLSIVYGDESLPRLYENSRISSDQLQGQSGIV 859
RLKD+IYE IF+MVEE P + V + +VY DESLPRLYENSRISS+QL Q+GIV
Sbjct: 601 VRLKDEIYEAIFQMVEELPLNYVDDRIYDFPLVYADESLPRLYENSRISSEQLPQQAGIV 660
Query: 860 KRAVALGRYLQNPLAMAATLCGPGREILSWKLNPLENFLTPDEKYGMVEQVMVDVTNQVG 919
KRAV+LGRYLQNPLAM +TLCGPGR+ILSWKL+ ++FL PDEKY MVEQVMVD+TNQVG
Sbjct: 661 KRAVSLGRYLQNPLAMISTLCGPGRDILSWKLHSFQDFLDPDEKYEMVEQVMVDITNQVG 720
Query: 920 LDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDFVTAHGLGKKVFVNA 979
+D NLA SHEWLFSPLQF++GLGPRKAASLQ+SLVRAGSIF RK+ + HG+GKKVFVNA
Sbjct: 721 IDINLAASHEWLFSPLQFVSGLGPRKAASLQKSLVRAGSIFVRKELIN-HGIGKKVFVNA 780
Query: 980 VGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED-VKGDANDDEDAEM 1039
GFLR+RRSGLA SSSQFIDLLDDTRIHPESY LAQELAKDV+ D V+GD +D+ EM
Sbjct: 781 AGFLRIRRSGLACSSSQFIDLLDDTRIHPESYGLAQELAKDVYAHDTVRGD--EDDAIEM 840
Query: 1040 AIEHVRDRPHLLRTLDVDEYAKSKKREDKRETFLDIKRELMQGFQDWRKQYEEPSQDEEF 1099
AIEHVRD P LR + +DEY +SK +E+K+ET+ I REL GFQDWR ++E DEEF
Sbjct: 841 AIEHVRDEPASLRKIVLDEYLRSKNQENKKETYSLIMRELSCGFQDWRSLFKEVDSDEEF 900
Query: 1100 YMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYVDDSREISDLSDRL 1159
YMISGET++T+ EGRIVQATV+KV KA C L+ GL G+L+KEDY DD R+I DLS++L
Sbjct: 901 YMISGETKETIGEGRIVQATVKKVTSGKAKCVLDCGLPGILLKEDYSDDGRDIVDLSNKL 960
Query: 1160 HEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHED-RSSLQSEQEKSR 1219
EGDIVTCK+KSI K RY V LVCKESEMR +H+ ++D YYHE+ R+S+ E+EK
Sbjct: 961 CEGDIVTCKVKSILKQRYHVLLVCKESEMR--KHRNLGDVDDYYHEEKRNSVLIEKEKVP 1020
Query: 1220 KEKELAKRHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRGPSFLTLTLKIYD 1279
KE K+ FK RMIVHPRFQNITA++A LSDK+ GESIVRPSSRG + LTL +KI D
Sbjct: 1021 KE----KKQFKSRMIVHPRFQNITAEQATVYLSDKNIGESIVRPSSRGLNHLTLMIKISD 1080
Query: 1280 GVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLSYR 1339
VYA+K+I+EG KE+KDI SL RIGKTLKIG +TFEDLDEVMDRYVDPLV HL ML++R
Sbjct: 1081 NVYANKEIIEGEKENKDIVSLQRIGKTLKIGNETFEDLDEVMDRYVDPLVTHLMTMLNHR 1140
Query: 1340 KFRRGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKG 1399
KFR GTK+E+D+L+++EK P +VY FG+SHEHPG+FIL+YIRS NPHHEYIGLYPKG
Sbjct: 1141 KFRTGTKSEIDDLLRVEKGVNPKMVVYSFGVSHEHPGSFILSYIRSANPHHEYIGLYPKG 1196
Query: 1400 FKFRKRMFEDIDRLVAYFQRHIDD 1420
FKFRKRMF D+D+L AYF+RHID+
Sbjct: 1201 FKFRKRMFGDLDKLAAYFKRHIDN 1196
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A8MS85 | 0.0e+00 | 68.26 | Transcription elongation factor SPT6 homolog OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
Q9CAM1 | 0.0e+00 | 61.41 | Transcription elongation factor SPT6-like OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Q8UVK2 | 2.7e-148 | 28.13 | Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1 | [more] |
Q7KZ85 | 2.3e-147 | 28.35 | Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2 | [more] |
Q62383 | 9.6e-146 | 27.93 | Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B3S8 | 0.0e+00 | 97.28 | Transcription elongation factor spt6 OS=Cucumis melo OX=3656 GN=LOC103485847 PE=... | [more] |
A0A0A0LKK6 | 0.0e+00 | 96.26 | Transcription elongation factor spt6 OS=Cucumis sativus OX=3659 GN=Csa_2G075460 ... | [more] |
A0A5D3DZK9 | 0.0e+00 | 94.82 | Transcription elongation factor spt6 OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A6J1D721 | 0.0e+00 | 93.82 | Transcription elongation factor spt6 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1EUY6 | 0.0e+00 | 93.70 | Transcription elongation factor spt6 OS=Cucurbita moschata OX=3662 GN=LOC1114361... | [more] |
Match Name | E-value | Identity | Description | |
XP_008441794.1 | 0.0e+00 | 97.28 | PREDICTED: transcription elongation factor SPT6 [Cucumis melo] | [more] |
XP_038889402.1 | 0.0e+00 | 97.46 | LOW QUALITY PROTEIN: transcription elongation factor SPT6 homolog [Benincasa his... | [more] |
KAE8651717.1 | 0.0e+00 | 96.26 | hypothetical protein Csa_006189 [Cucumis sativus] | [more] |
XP_011649014.1 | 0.0e+00 | 96.26 | transcription elongation factor SPT6 homolog [Cucumis sativus] | [more] |
TYK28898.1 | 0.0e+00 | 94.82 | transcription elongation factor SPT6 [Cucumis melo var. makuwa] | [more] |