Lsi08G000020 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi08G000020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DNA-binding storekeeper protein-relatedtranscriptional regulator
Location	chr08: 83534 .. 84175 (+)
RNA-Seq Expression	Lsi08G000020
Synteny	Lsi08G000020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGCTCAGACAAATCAGATGGAGAGTACAAAATAGAGTTGGAAGTGGAAAGTAGTGAAGAATATTCAGAATATTGTCGGTCAAAAAGAAGGAATGCGCAAAGAAGAAAAAAGAGATCATCATCAGGTGGAGTATTGGAATGGGAGGAAGATGATGAAATCACTTTGTTGAAACAACTCTATGAATTCTCAGCTGGTAGCTGCAAGGGTTTGTATTCAAAGGCATTTTATGAATATGTGAAGCCAAGCTTAAGGAACAAGGAAGTGACGATGAGTGAAATGAGAGGCAAAATTGGTGGATTCAAAAACCAATATTTGGAGTGGAGAAGGAAAGGCAATAATAATAATAATAATCATGAATTGAAATTGTCAGGGCCTCACCAACGCCAAGTGCTTGTGCTATCGAAGAGAATATGGGGAGATTATGATGGGGGAATGAAGCATTTGGAAGGATTTAGGGAGTTTCTTGGAGAGATGGAGATTGATATCAATTGTTTGATGCCTTCATCTTTGGAATATCTTAAGAAAGAGTGGGAAGTTCAAATGCTTATGTACATTCAGCTTTTGTCAATCAAGTCCAACTTTGATGCTAAGCTTAGGGGATTGATCATGTATGCCAAATCTGATTCAAACACCTAA

mRNA sequence

ATGTCGGGCTCAGACAAATCAGATGGAGAGTACAAAATAGAGTTGGAAGTGGAAAGTAGTGAAGAATATTCAGAATATTGTCGGTCAAAAAGAAGGAATGCGCAAAGAAGAAAAAAGAGATCATCATCAGGTGGAGTATTGGAATGGGAGGAAGATGATGAAATCACTTTGTTGAAACAACTCTATGAATTCTCAGCTGGTAGCTGCAAGGGTTTGTATTCAAAGGCATTTTATGAATATGTGAAGCCAAGCTTAAGGAACAAGGAAGTGACGATGAGTGAAATGAGAGGCAAAATTGGTGGATTCAAAAACCAATATTTGGAGTGGAGAAGGAAAGGCAATAATAATAATAATAATCATGAATTGAAATTGTCAGGGCCTCACCAACGCCAAGTGCTTGTGCTATCGAAGAGAATATGGGGAGATTATGATGGGGGAATGAAGCATTTGGAAGGATTTAGGGAGTTTCTTGGAGAGATGGAGATTGATATCAATTGTTTGATGCCTTCATCTTTGGAATATCTTAAGAAAGAGTGGGAAGTTCAAATGCTTATGTACATTCAGCTTTTGTCAATCAAGTCCAACTTTGATGCTAAGCTTAGGGGATTGATCATGTATGCCAAATCTGATTCAAACACCTAA

Coding sequence (CDS)

ATGTCGGGCTCAGACAAATCAGATGGAGAGTACAAAATAGAGTTGGAAGTGGAAAGTAGTGAAGAATATTCAGAATATTGTCGGTCAAAAAGAAGGAATGCGCAAAGAAGAAAAAAGAGATCATCATCAGGTGGAGTATTGGAATGGGAGGAAGATGATGAAATCACTTTGTTGAAACAACTCTATGAATTCTCAGCTGGTAGCTGCAAGGGTTTGTATTCAAAGGCATTTTATGAATATGTGAAGCCAAGCTTAAGGAACAAGGAAGTGACGATGAGTGAAATGAGAGGCAAAATTGGTGGATTCAAAAACCAATATTTGGAGTGGAGAAGGAAAGGCAATAATAATAATAATAATCATGAATTGAAATTGTCAGGGCCTCACCAACGCCAAGTGCTTGTGCTATCGAAGAGAATATGGGGAGATTATGATGGGGGAATGAAGCATTTGGAAGGATTTAGGGAGTTTCTTGGAGAGATGGAGATTGATATCAATTGTTTGATGCCTTCATCTTTGGAATATCTTAAGAAAGAGTGGGAAGTTCAAATGCTTATGTACATTCAGCTTTTGTCAATCAAGTCCAACTTTGATGCTAAGCTTAGGGGATTGATCATGTATGCCAAATCTGATTCAAACACCTAA

Protein sequence

MSGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYLEWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWGDYDGGMKHLEGFREFLGEMEIDINCLMPSSLEYLKKEWEVQMLMYIQLLSIKSNFDAKLRGLIMYAKSDSNT

Homology

[Close]

BLAST of Lsi08G000020 vs. ExPASy TrEMBL
Match: A0A6J1GK86 (probable transcription factor At1g66420 OS=Cucurbita moschata OX=3662 GN=LOC111454655 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 110/218 (50.46%), Postives = 140/218 (64.22%), Query Frame = 0


Query: 2   SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQL 61
           S  D SD EYKI  E ESSEE  E  +S   ++++R KR     VLEWEE+DEI +L+QL
Sbjct: 14  SSEDNSDSEYKI--EEESSEESEEQSKSNNNSSKKRIKRR----VLEWEEEDEIIVLQQL 73

Query: 62  YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYL--EWRRKGNNNNNN 121
           Y+F  G     YSKAFYE+VK  L N +V+M ++  KI  FK +YL  E R+K N     
Sbjct: 74  YQF--GGSNASYSKAFYEFVKKRLNNNQVSMHQLSNKIDRFKKEYLKNECRKKEN----- 133

Query: 122 HELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEY 181
            +LK S  H+ +V +LS+RIWG        G MK+ +GF E+L EM+IDI+CL PS LE+
Sbjct: 134 -DLKFSEYHEFEVFMLSRRIWGGKRSKSNGGRMKYAKGFLEYLEEMDIDIDCLTPSCLEH 193

Query: 182 LKKEWEVQMLMYIQLLSIKSNFDAKLRGLIMYAKSDSN 213
            KKEWEVQ+LMYI+LLS KS FDAKL  L+    S  N
Sbjct: 194 FKKEWEVQLLMYIELLSKKSKFDAKLMELLFTKSSHPN 217

[Close]

BLAST of Lsi08G000020 vs. ExPASy TrEMBL
Match: A0A6J1I882 (probable transcription factor At1g61730 OS=Cucurbita maxima OX=3661 GN=LOC111471848 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.7e-41
Identity = 109/218 (50.00%), Postives = 139/218 (63.76%), Query Frame = 0


Query: 2   SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQL 61
           S  D SD +YKI  E ESSEE  E  +S   + ++R KR     VLEW+E+DEI +L+QL
Sbjct: 14  SSEDNSDSKYKI--EEESSEESEEQSKSNNHSIKKRIKRR----VLEWQEEDEIIVLQQL 73

Query: 62  YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYL--EWRRKGNNNNNN 121
           YEF  G     YSKAFYE+VK  L N +V+M +   KI  FK +YL  E R+K N     
Sbjct: 74  YEF--GGSNASYSKAFYEFVKKRLSNNQVSMHQTSNKIDRFKKEYLKNECRKKEN----- 133

Query: 122 HELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEY 181
            +LK S  H+ +V +LSKRIWG        GGMK+ +GF E+L EM+IDI+CL PS LE+
Sbjct: 134 -DLKFSEYHEFEVFMLSKRIWGARRSKSNGGGMKYAKGFLEYLEEMDIDIDCLTPSCLEH 193

Query: 182 LKKEWEVQMLMYIQLLSIKSNFDAKLRGLIMYAKSDSN 213
            KKEWEVQ+LMYI+LLS KS F+ KL  L+    S +N
Sbjct: 194 FKKEWEVQLLMYIELLSKKSKFNGKLMELLFTKSSHNN 217

[Close]

BLAST of Lsi08G000020 vs. ExPASy TrEMBL
Match: A0A6J1E125 (probable transcription factor At4g00610 OS=Momordica charantia OX=3673 GN=LOC111025438 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30
Identity = 96/227 (42.29%), Postives = 134/227 (59.03%), Query Frame = 0


Query: 7   SDGEYKIELEVES-SEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFS 66
           SD EY++E E ES SE+     R +RR+ + + K+  +    +W E+DE+ +LKQLYEFS
Sbjct: 15  SDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFS 74

Query: 67  AGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYLEWRRKGNNNNNNHELKLS 126
             +    YS+ FYE+VK  L   +V+M +MR KI G + +YLE       N+  + LK  
Sbjct: 75  GKN--ATYSEEFYEFVKKKL-GGQVSMHQMRNKIRGLRRKYLE-------NDECNGLKFC 134

Query: 127 G----PHQRQVLVLSKRIWGDYD----------GGMKHLE----GFREFLGEMEIDINCL 186
           G     HQR+VL  SKRIWG  +          GG + +E    GF E L EMEI+++CL
Sbjct: 135 GSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCL 194

Query: 187 MPSSLEYLKKEWEVQMLMYIQLLSIKSNFDAKLRGL-IMYAKSDSNT 214
            PS LE+L K+WE+Q LM++QLLS K   DAKL  L I +  + +NT
Sbjct: 195 KPSCLEFLYKDWEIQTLMHVQLLSNKCKLDAKLTELCIQFLNTPTNT 231

[Close]

BLAST of Lsi08G000020 vs. ExPASy TrEMBL
Match: A0A6D2LHW5 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS48046 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.5e-06
Identity = 38/96 (39.58%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 49  WEEDDEITLLKQL--YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQY 108
           W EDDEIT+L+    YE  AG+   + S AFYE VK S+ + +V  +++  K+ G K ++
Sbjct: 162 WTEDDEITVLQGFIDYEADAGASPFVNSTAFYESVKKSI-SFDVKKTQVMEKVRGLKKKF 221

Query: 109 LEWRRKGNNNNNNHELKLSGPHQRQVLVLSKRIWGD 143
              R KG    +  + K + PH R+   LSK IWGD
Sbjct: 222 ENNRSKG---KDGEDPKFAKPHDRKAFDLSKIIWGD 253

[Close]

BLAST of Lsi08G000020 vs. ExPASy TrEMBL
Match: A0A6J1DXL5 (probable transcription factor At4g01260 OS=Momordica charantia OX=3673 GN=LOC111025442 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.9e-06
Identity = 57/202 (28.22%), Postives = 92/202 (45.54%), Query Frame = 0


Query: 2   SGSDKSD-GEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQ 61
           +GS+  D G  K+       E+  E C S   N++   K+S   G   W   DE  +LK 
Sbjct: 19  TGSETEDEGSRKMSSLKRGREKDEEKCSSP--NSKEESKKSKKMG-FHWSWSDECVILKN 78

Query: 62  LYEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYLEWRRKGNNNNNNH 121
            YEF+  +  G YSK FY +VK  L + +V+ S++  K+   + ++L+   KG       
Sbjct: 79  FYEFAGKN--GSYSKDFYHFVKNKL-SVDVSNSQLSDKVYRLRKRFLKDECKG-----KI 138

Query: 122 ELKLSGPHQRQVLV-LSKRIWGDYDGGMKHLEG----------------FREFLGEMEID 181
            +K S  +Q + L  +S  IWG          G                F   +  +++D
Sbjct: 139 RMKFSKGNQLEKLYEMSNNIWGSNSNTQNTQSGGNQWKAEAVNRLCEEMFERVIENVKVD 198

Query: 182 INCLMPSSLEYLKKEWEVQMLM 186
           I+C+ P+ L  ++K+WE QM M
Sbjct: 199 ISCIPPNVLXDIRKDWE-QMKM 208

[Close]

BLAST of Lsi08G000020 vs. NCBI nr
Match: KAG6585873.1 (putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-41
Identity = 110/218 (50.46%), Postives = 140/218 (64.22%), Query Frame = 0


Query: 2   SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQL 61
           S  D SD EYKI  E ESSEE  E  +S   ++++R K    G VLEWEE+DEI +L+QL
Sbjct: 14  SSEDNSDSEYKI--EEESSEESEEQSKSNNNSSKKRIK----GRVLEWEEEDEIIVLQQL 73

Query: 62  YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYL--EWRRKGNNNNNN 121
           Y+F  G     YSKAFYE+VK  L N +V+M ++  KI  FK +YL  E R+K N     
Sbjct: 74  YQF--GGSNASYSKAFYEFVKKRLNNNQVSMHQLSNKIDRFKKEYLKNECRKKEN----- 133

Query: 122 HELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEY 181
            +LK S  H+ +V +LS+RIWG        G MK+ +GF E+L EM+IDI+CL PS LE+
Sbjct: 134 -DLKFSEYHEFEVFMLSRRIWGGKRSKSNGGRMKYAKGFLEYLEEMDIDIDCLTPSCLEH 193

Query: 182 LKKEWEVQMLMYIQLLSIKSNFDAKLRGLIMYAKSDSN 213
            KKEWEVQ+LMYI+LLS KS FDAKL  L+    S  N
Sbjct: 194 FKKEWEVQLLMYIELLSKKSKFDAKLMELLFTKSSHHN 217

[Close]

BLAST of Lsi08G000020 vs. NCBI nr
Match: XP_023521141.1 (probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-41
Identity = 110/218 (50.46%), Postives = 141/218 (64.68%), Query Frame = 0


Query: 2   SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQL 61
           S  D SD EYKI  E ESSEE  E  +    ++++R KR     VLEWEE+DEI +L+QL
Sbjct: 14  SSEDNSDSEYKI--EEESSEESEEQSKRNNNSSKKRIKRR----VLEWEEEDEIIVLQQL 73

Query: 62  YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYL--EWRRKGNNNNNN 121
           Y+F  G     YSKAFYE+VK  L N +V+M++M  KI  FK +YL  E R+K N     
Sbjct: 74  YQF--GGSNASYSKAFYEFVKKRLNNNQVSMNQMSNKIDRFKKEYLKNECRKKVN----- 133

Query: 122 HELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEY 181
            +LK S  H+ +V +LS+RIWG        G MK+ +GF E+L EM+IDI+CL PS LE+
Sbjct: 134 -DLKFSEYHEFEVFMLSRRIWGGKRSKSNGGRMKYAKGFSEYLEEMDIDIDCLTPSCLEH 193

Query: 182 LKKEWEVQMLMYIQLLSIKSNFDAKLRGLIMYAKSDSN 213
            KKEWEVQ+LMYI+LLS KS FDAKL  L+    S +N
Sbjct: 194 FKKEWEVQLLMYIELLSKKSKFDAKLMELLFTKSSHNN 217

[Close]

BLAST of Lsi08G000020 vs. NCBI nr
Match: XP_022951915.1 (probable transcription factor At1g66420 [Cucurbita moschata])

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-41
Identity = 110/218 (50.46%), Postives = 140/218 (64.22%), Query Frame = 0


Query: 2   SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQL 61
           S  D SD EYKI  E ESSEE  E  +S   ++++R KR     VLEWEE+DEI +L+QL
Sbjct: 14  SSEDNSDSEYKI--EEESSEESEEQSKSNNNSSKKRIKRR----VLEWEEEDEIIVLQQL 73

Query: 62  YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYL--EWRRKGNNNNNN 121
           Y+F  G     YSKAFYE+VK  L N +V+M ++  KI  FK +YL  E R+K N     
Sbjct: 74  YQF--GGSNASYSKAFYEFVKKRLNNNQVSMHQLSNKIDRFKKEYLKNECRKKEN----- 133

Query: 122 HELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEY 181
            +LK S  H+ +V +LS+RIWG        G MK+ +GF E+L EM+IDI+CL PS LE+
Sbjct: 134 -DLKFSEYHEFEVFMLSRRIWGGKRSKSNGGRMKYAKGFLEYLEEMDIDIDCLTPSCLEH 193

Query: 182 LKKEWEVQMLMYIQLLSIKSNFDAKLRGLIMYAKSDSN 213
            KKEWEVQ+LMYI+LLS KS FDAKL  L+    S  N
Sbjct: 194 FKKEWEVQLLMYIELLSKKSKFDAKLMELLFTKSSHPN 217

[Close]

BLAST of Lsi08G000020 vs. NCBI nr
Match: XP_022973281.1 (probable transcription factor At1g61730 [Cucurbita maxima])

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-40
Identity = 109/218 (50.00%), Postives = 139/218 (63.76%), Query Frame = 0


Query: 2   SGSDKSDGEYKIELEVESSEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQL 61
           S  D SD +YKI  E ESSEE  E  +S   + ++R KR     VLEW+E+DEI +L+QL
Sbjct: 14  SSEDNSDSKYKI--EEESSEESEEQSKSNNHSIKKRIKRR----VLEWQEEDEIIVLQQL 73

Query: 62  YEFSAGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYL--EWRRKGNNNNNN 121
           YEF  G     YSKAFYE+VK  L N +V+M +   KI  FK +YL  E R+K N     
Sbjct: 74  YEF--GGSNASYSKAFYEFVKKRLSNNQVSMHQTSNKIDRFKKEYLKNECRKKEN----- 133

Query: 122 HELKLSGPHQRQVLVLSKRIWG-----DYDGGMKHLEGFREFLGEMEIDINCLMPSSLEY 181
            +LK S  H+ +V +LSKRIWG        GGMK+ +GF E+L EM+IDI+CL PS LE+
Sbjct: 134 -DLKFSEYHEFEVFMLSKRIWGARRSKSNGGGMKYAKGFLEYLEEMDIDIDCLTPSCLEH 193

Query: 182 LKKEWEVQMLMYIQLLSIKSNFDAKLRGLIMYAKSDSN 213
            KKEWEVQ+LMYI+LLS KS F+ KL  L+    S +N
Sbjct: 194 FKKEWEVQLLMYIELLSKKSKFNGKLMELLFTKSSHNN 217

[Close]

BLAST of Lsi08G000020 vs. NCBI nr
Match: XP_022158994.1 (probable transcription factor At4g00610 [Momordica charantia])

HSP 1 Score: 143.3 bits (360), Expect = 2.4e-30
Identity = 96/227 (42.29%), Postives = 134/227 (59.03%), Query Frame = 0


Query: 7   SDGEYKIELEVES-SEEYSEYCRSKRRNAQRRKKRSSSGGVLEWEEDDEITLLKQLYEFS 66
           SD EY++E E ES SE+     R +RR+ + + K+  +    +W E+DE+ +LKQLYEFS
Sbjct: 15  SDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQLYEFS 74

Query: 67  AGSCKGLYSKAFYEYVKPSLRNKEVTMSEMRGKIGGFKNQYLEWRRKGNNNNNNHELKLS 126
             +    YS+ FYE+VK  L   +V+M +MR KI G + +YLE       N+  + LK  
Sbjct: 75  GKN--ATYSEEFYEFVKKKL-GGQVSMHQMRNKIRGLRRKYLE-------NDECNGLKFC 134

Query: 127 G----PHQRQVLVLSKRIWGDYD----------GGMKHLE----GFREFLGEMEIDINCL 186
           G     HQR+VL  SKRIWG  +          GG + +E    GF E L EMEI+++CL
Sbjct: 135 GSGSQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQYERGFVESLEEMEIEMDCL 194

Query: 187 MPSSLEYLKKEWEVQMLMYIQLLSIKSNFDAKLRGL-IMYAKSDSNT 214
            PS LE+L K+WE+Q LM++QLLS K   DAKL  L I +  + +NT
Sbjct: 195 KPSCLEFLYKDWEIQTLMHVQLLSNKCKLDAKLTELCIQFLNTPTNT 231

The following BLAST results are available for this feature:

BLAST of Lsi08G000020 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi08G000020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GK86	1.1e-41	50.46	probable transcription factor At1g66420 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1I882	5.7e-41	50.00	probable transcription factor At1g61730 OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A6J1E125	1.2e-30	42.29	probable transcription factor At4g00610 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6D2LHW5	4.5e-06	39.58	Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS48046 ...	[more]
A0A6J1DXL5	5.9e-06	28.22	probable transcription factor At4g01260 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Lsi08G000020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585873.1	1.4e-41	50.46	putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023521141.1	1.4e-41	50.46	probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo]	[more]
XP_022951915.1	2.4e-41	50.46	probable transcription factor At1g66420 [Cucurbita moschata]	[more]
XP_022973281.1	1.2e-40	50.00	probable transcription factor At1g61730 [Cucurbita maxima]	[more]
XP_022158994.1	2.4e-30	42.29	probable transcription factor At4g00610 [Momordica charantia]	[more]

BLAST of Lsi08G000020 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007592	GLABROUS1 enhancer-binding protein family	PFAM	PF04504	DUF573	coord: 49..141 e-value: 4.5E-12 score: 46.5
IPR007592	GLABROUS1 enhancer-binding protein family	PANTHER	PTHR31662	BNAANNG10740D PROTEIN-RELATED	coord: 36..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G000020.1	Lsi08G000020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated