Lsi07G014820 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G014820
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	squamosa promoter-binding-like protein 13A
Location	chr07: 21593382 .. 21595911 (-)
RNA-Seq Expression	Lsi07G014820
Synteny	Lsi07G014820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCTTTAATCAAAGAGGAGGGGGATTAGAGAAATGAAATTTGGGTATTATTAAAATGCTTTGTGATTTCATATTGCTAAAGCTTTCCATCAAATTTTCCTTCTTCGAGTACTGCACACCCAGACCAGTGTCCTGTCTCTCTTATAAGTTATATCATCCAACCATTCTCTATCCTTGACTGTATTTTCCCTTTTTCTGTCTTTTTTTTTTTATAAAAAAAATCAAAAAGTGAAAAGACCCATTTGAAGACTTGGGCATGTTCAATTGGAGAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGCAGAAATCGAACAAGTCTTGTTTATGGATTGGGGTTGGGGAAAGTTTTCTGGGGAACCCATTTTCCCAGAAAACAAACAGAACCCACCCTCTAGTTTCTCTGATTCGATTGGCTCAAACAAGGGTTCGAGCCAAGAAAGTTCTTCATCTCATGGATCCTCTAAAAGGACTCGATTACTCCATGGAAGCCAAAACCAGACGTGTTTGGTTGATGGCTGTGACACTGACCTAACCAATTGCAAGGATTATCATCGACGCCATAGGGTTTGCGATTCCCACTCCAAAACCCCTGTTGTGATGGTAAGAGGAGAGGAGAAACGATTCTGTCAACAGTGTAGCAGGTAAAAACAACAATAAATAATTGATGGGTTTTGTTTGTTTTCTTGGGATTTTGCCTCAAAATGTATGGTTTCTTGATTGTTCTTGAGTAAAAGTATTGTAGATTCCATTCGCTTGGTGAGTTTGATGAGGTGAAGAGGAGCTGTAGGAAGCGGCTTGATGGGCATAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCAATGTTTATGAGTTCAAGGGATTTTCTGTCAAATTGTAAAGGTTAGTGAGTGATTTTGTTTTGTAATATAACCATAGAAATGTGTTGATGGATGTGGTTGTTTGGAGGGGGGGAAAAAGGAAAAGAAAAATGGTTCATGATTGTTGTTGTGGTTGTAAAATTGGGTTATCCTCCTCAAATCCATAGGTCCAATTGTGCTGCAGTTCAGTGATCAACAGATTCATCATGTGCCTGATGAACTTGGTAGGACTTTATGGCCTGTAAGGACTGAAGGTGAAGAGAAATCTTCAATTGTTCCACCAAATTCCTCTGCTTACTTCAGTTATGGAAGAGGAGACAACAAACAGTTGCCTTTTTTCCTGCATAAAAATGGCACAAGACAAGGGAAGCAAATGGTTTCTTCTCAGTTGTCTTTCAGTCAGCAACTTCCTGATGTAATCTCTCTGGGAAGTGAGGTGGGCAACCCAAAACCAGTGCCCACCGATACTTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCACCCAGATGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTGTTCCAGTCCAAACTCAAGAGACTGAGCTGCATTTCAGTAGTTTAAGTGACTTCTCTGGCTCCTTTGGCTCCAAGGACAAGCCTGTTTGTAAAACCAACCTTCATAGTGAGTTGGTTCTTGAAATGGAGGAAGAATCTGATGGCTTGTTCCAAAGTGAGGCTCCACACAAGTTCCCCATTTCTTGGGAGTAGTTTGCTTCAATGAGCTTGTCTGTTTTTTTCTGGCTTTACTCCAAGACTTCTTTTGAATTTGAACTTCTATGTTCTGTGATTGTAGACAGCAAATATATTTTGCTGGTTTGTTTTCTGAGTTTCCATAACTTCTTTGACATTATCATTTACACTAGGAGTCGCCTCCGCTTTGTGAGCACGTTACAATATCTTCGTGCCATTTTGTAACACCTACGGCGAGGGATCCTGGTGATGATTGTCTTTCTGTTCGTCTTCTAGACTTGTTTCTTGAATCATGTTTTCTTTGCAAGTTCCTATGTTCTTACATATCCTTGATCATGTTTAGTTTTACTGCTGGATTTTTATATCTTGAGATAAATGTTATCTTTAATCTAGTCTAGTCCATGGGATTTCATAAATGGTTTTCTTGGTAGTCTGTTGTCTCAAAATATCACATTTTAAATCTTGAGGTTTTCAAAATATTTCATCAACTCACAAAGTTATCAGGTCTTGCATGAAGAACTGCTGAATTAGTTATCCCCTTCTTCCTTTTACAAGAAGTTAGCTCAGAGCTTAAGCAACATTAGTATTAGTAGCAGCACATACTAGAAGTAGAACCAACATTCCCCTTTTATAGAAAGTATTTAAAAAGAAACGTTTGAATCCTACTTTGACCTCAAAGATATATTTTTGTCTATTTGTTTTGTTCACTGTATTGTACTAATGAAACATTCATTTTAGTACCTATACTTTTAAAAGAGGGCTGTTTTGGTCTTTTTATTTATACTTTTAGAAGATGGTTGTTTTGGTCATTTTATTTCATTGTTAATCTTGATTTCAACTCGATAGATTTCTTAAAATACTCCTAGGATGAGAAGTAGGTCCCTTAGTTCCAACCTTTGTTATCTTACAGTAGAGTAAGTCTACACGGC

mRNA sequence

ACTCTTTAATCAAAGAGGAGGGGGATTAGAGAAATGAAATTTGGGTATTATTAAAATGCTTTGTGATTTCATATTGCTAAAGCTTTCCATCAAATTTTCCTTCTTCGAGTACTGCACACCCAGACCAGTGTCCTGTCTCTCTTATAAGTTATATCATCCAACCATTCTCTATCCTTGACTGTATTTTCCCTTTTTCTGTCTTTTTTTTTTTATAAAAAAAATCAAAAAGTGAAAAGACCCATTTGAAGACTTGGGCATGTTCAATTGGAGAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGCAGAAATCGAACAAGTCTTGTTTATGGATTGGGGTTGGGGAAAGTTTTCTGGGGAACCCATTTTCCCAGAAAACAAACAGAACCCACCCTCTAGTTTCTCTGATTCGATTGGCTCAAACAAGGGTTCGAGCCAAGAAAGTTCTTCATCTCATGGATCCTCTAAAAGGACTCGATTACTCCATGGAAGCCAAAACCAGACGTGTTTGGTTGATGGCTGTGACACTGACCTAACCAATTGCAAGGATTATCATCGACGCCATAGGGTTTGCGATTCCCACTCCAAAACCCCTGTTGTGATGGTAAGAGGAGAGGAGAAACGATTCTGTCAACAGTGTAGCAGATTCCATTCGCTTGGTGAGTTTGATGAGGTGAAGAGGAGCTGTAGGAAGCGGCTTGATGGGCATAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCAATGTTTATGAGTTCAAGGGATTTTCTGTCAAATTGTAAAGGTCCAATTGTGCTGCAGTTCAGTGATCAACAGATTCATCATGTGCCTGATGAACTTGGTAGGACTTTATGGCCTGTAAGGACTGAAGGTGAAGAGAAATCTTCAATTGTTCCACCAAATTCCTCTGCTTACTTCAGTTATGGAAGAGGAGACAACAAACAGTTGCCTTTTTTCCTGCATAAAAATGGCACAAGACAAGGGAAGCAAATGGTTTCTTCTCAGTTGTCTTTCAGTCAGCAACTTCCTGATGTAATCTCTCTGGGAAGTGAGGTGGGCAACCCAAAACCAGTGCCCACCGATACTTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCACCCAGATGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTGTTCCAGTCCAAACTCAAGAGACTGAGCTGCATTTCAGTAGTTTAAGTGACTTCTCTGGCTCCTTTGGCTCCAAGGACAAGCCTGTTTGTAAAACCAACCTTCATAGTGAGTTGGTTCTTGAAATGGAGGAAGAATCTGATGGCTTGTTCCAAAGTGAGGCTCCACACAAGTTCCCCATTTCTTGGGAGTAGTTTGCTTCAATGAGCTTGTCTGTTTTTTTCTGGCTTTACTCCAAGACTTCTTTTGAATTTGAACTTCTATGTTCTGTGATTGTAGACAGCAAATATATTTTGCTGGTTTGTTTTCTGAGTTTCCATAACTTCTTTGACATTATCATTTACACTAGGAGTCGCCTCCGCTTTGTGAGCACGTTACAATATCTTCGTGCCATTTTGTAACACCTACGGCGAGGGATCCTGGTGATGATTGTCTTTCTGTTCGTCTTCTAGACTTGTTTCTTGAATCATGTTTTCTTTGCAAGTTCCTATGTTCTTACATATCCTTGATCATGTTTAGTTTTACTGCTGGATTTTTATATCTTGAGATAAATGTTATCTTTAATCTAGTCTAGTCCATGGGATTTCATAAATGGTTTTCTTGGTAGTCTGTTGTCTCAAAATATCACATTTTAAATCTTGAGGTTTTCAAAATATTTCATCAACTCACAAAGTTATCAGGTCTTGCATGAAGAACTGCTGAATTAGTTATCCCCTTCTTCCTTTTACAAGAAGTTAGCTCAGAGCTTAAGCAACATTAGTATTAGTAGCAGCACATACTAGAAGTAGAACCAACATTCCCCTTTTATAGAAAGTATTTAAAAAGAAACGTTTGAATCCTACTTTGACCTCAAAGATATATTTTTGTCTATTTGTTTTGTTCACTGTATTGTACTAATGAAACATTCATTTTAGTACCTATACTTTTAAAAGAGGGCTGTTTTGGTCTTTTTATTTATACTTTTAGAAGATGGTTGTTTTGGTCATTTTATTTCATTGTTAATCTTGATTTCAACTCGATAGATTTCTTAAAATACTCCTAGGATGAGAAGTAGGTCCCTTAGTTCCAACCTTTGTTATCTTACAGTAGAGTAAGTCTACACGGC

Coding sequence (CDS)

ATGGATTGGGGTTGGGGAAAGTTTTCTGGGGAACCCATTTTCCCAGAAAACAAACAGAACCCACCCTCTAGTTTCTCTGATTCGATTGGCTCAAACAAGGGTTCGAGCCAAGAAAGTTCTTCATCTCATGGATCCTCTAAAAGGACTCGATTACTCCATGGAAGCCAAAACCAGACGTGTTTGGTTGATGGCTGTGACACTGACCTAACCAATTGCAAGGATTATCATCGACGCCATAGGGTTTGCGATTCCCACTCCAAAACCCCTGTTGTGATGGTAAGAGGAGAGGAGAAACGATTCTGTCAACAGTGTAGCAGATTCCATTCGCTTGGTGAGTTTGATGAGGTGAAGAGGAGCTGTAGGAAGCGGCTTGATGGGCATAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCAATGTTTATGAGTTCAAGGGATTTTCTGTCAAATTGTAAAGGTCCAATTGTGCTGCAGTTCAGTGATCAACAGATTCATCATGTGCCTGATGAACTTGGTAGGACTTTATGGCCTGTAAGGACTGAAGGTGAAGAGAAATCTTCAATTGTTCCACCAAATTCCTCTGCTTACTTCAGTTATGGAAGAGGAGACAACAAACAGTTGCCTTTTTTCCTGCATAAAAATGGCACAAGACAAGGGAAGCAAATGGTTTCTTCTCAGTTGTCTTTCAGTCAGCAACTTCCTGATGTAATCTCTCTGGGAAGTGAGGTGGGCAACCCAAAACCAGTGCCCACCGATACTTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCACCCAGATGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTGTTCCAGTCCAAACTCAAGAGACTGAGCTGCATTTCAGTAGTTTAAGTGACTTCTCTGGCTCCTTTGGCTCCAAGGACAAGCCTGTTTGTAAAACCAACCTTCATAGTGAGTTGGTTCTTGAAATGGAGGAAGAATCTGATGGCTTGTTCCAAAGTGAGGCTCCACACAAGTTCCCCATTTCTTGGGAGTAG

Protein sequence

MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGSQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVRTEGEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFSQQLPDVISLGSEVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSSLSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISWE

Homology

[Close]

BLAST of Lsi07G014820 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.8e-34
Identity = 118/305 (38.69%), Postives = 155/305 (50.82%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSSFSD-----SIGSNKGS--SQESSSSHGSSKRTRLLHGSQNQ-- 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR      NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVR 187
           SCRKRLDGHNRRRRKPQPE +   + +F +  +G  +L+FS          +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEEKSSI-VPPNSSAYFSYGRGDNKQLPFFLHKNGTR-QGKQMVSSQLSFSQQLPDVI 247
             G    S+ V  N S   SYG+  +  +     K G         +S  S ++Q P + 
Sbjct: 220 --GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ 279

Query: 248 SLGSEVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETEL 302
              S           +   DS CAL LLSS        + +  L+Q  LS+  +  ET  
Sbjct: 280 EEESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVF 329

[Close]

BLAST of Lsi07G014820 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.8e-34
Identity = 118/305 (38.69%), Postives = 155/305 (50.82%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSSFSD-----SIGSNKGS--SQESSSSHGSSKRTRLLHGSQNQ-- 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR      NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVR 187
           SCRKRLDGHNRRRRKPQPE +   + +F +  +G  +L+FS          +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEEKSSI-VPPNSSAYFSYGRGDNKQLPFFLHKNGTR-QGKQMVSSQLSFSQQLPDVI 247
             G    S+ V  N S   SYG+  +  +     K G         +S  S ++Q P + 
Sbjct: 220 --GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ 279

Query: 248 SLGSEVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETEL 302
              S           +   DS CAL LLSS        + +  L+Q  LS+  +  ET  
Sbjct: 280 EEESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVF 329

[Close]

BLAST of Lsi07G014820 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-33
Identity = 69/106 (65.09%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 54  GSQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 113
           G Q  +C VDGC  DL+  +DYHRRH+VC+ HSKTPVV+V G E RFCQQCSRFH LGEF
Sbjct: 109 GGQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEF 168

Query: 114 DEVKRSCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFS 160
           DE KRSCRKRLDGHNRRRRKPQ +S  MSS  F+++ +G     F+
Sbjct: 169 DEAKRSCRKRLDGHNRRRRKPQADS--MSSGSFMTSQQGTRFASFT 212

[Close]

BLAST of Lsi07G014820 vs. ExPASy Swiss-Prot
Match: Q2R3Y1 (Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL19 PE=3 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 6.9e-33
Identity = 97/234 (41.45%), Postives = 125/234 (53.42%), Query Frame = 0


Query: 54  GSQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 113
           G   + C VDGC +DL+ C+DYHRRH+VC++H+KTPVV+V G+E+RFCQQCSRFH+L EF
Sbjct: 87  GGGAEACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVAGQEQRFCQQCSRFHNLAEF 146

Query: 114 DEVKRSCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKG------PIVLQFSDQQIHHVP 173
           D+ K+SCRKRLDGHNRRRRKPQ ++  ++ R FL   +       P     +DQ    + 
Sbjct: 147 DDGKKSCRKRLDGHNRRRRKPQHDA--LNPRSFLPYHQANQFSVYPQTFPIADQNADALM 206

Query: 174 DELGRTLWPVRTEGEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLS 233
             L R                 P  S  FS    + KQ P F+   G+  G         
Sbjct: 207 RPLDR----------------HPPFSISFSGTFREPKQFP-FMQDGGSGLGAARHDLLRP 266

Query: 234 FSQQLPDVISLGSEVGNPKPVPTDTSPEDSGCALYLLSS--HPVQAHPDAGLSS 280
           FS    D  ++ +       VP    PE   CAL LLSS  HP    P AG+SS
Sbjct: 267 FSSP-EDGANITTTRSACNGVPHGLDPE---CALSLLSSSLHP---SPAAGISS 294

[Close]

BLAST of Lsi07G014820 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-32
Identity = 108/321 (33.64%), Postives = 144/321 (44.86%), Query Frame = 0


Query: 37  QESSSSHGSSKRTRLL--HGSQNQ---TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVV 96
           +E  ++ G++KR R     G Q Q   +C VDGC  DL  C+DYHRRH+VC++HSKTPVV
Sbjct: 76  REREAAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVV 135

Query: 97  MVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCK 156
           +V G E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP++  M+S  F+++ +
Sbjct: 136 VVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDT--MASASFIASQQ 195

Query: 157 GPIVLQFSDQQIHHVPDELGRTLWPVRTEGEEKSSIVPPNSSAYFSYGRGDNKQLPFFLH 216
           G     F+  ++           WP    G  K+   P + +     G   + +   F+ 
Sbjct: 196 GTRFSPFAHPRL--------EASWP---PGVMKTEESPYHITHQIPLGSSSSSRQQHFVA 255

Query: 217 KNGTRQGKQMVSSQLSFSQQLPDVISLGSEVGNPKPVP-------TDTSPEDSG------ 276
                        +  F Q+     + G  +  P   P       T    E SG      
Sbjct: 256 LGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTGAPSESSGAGGSKM 315

Query: 277 -------------CALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSSLSDF- 324
                        CAL LLS+    +  D         H+ +  Q     L F S S F 
Sbjct: 316 FSDQGLARVLDSDCALSLLSAPANSSGIDVSRMVRPTEHVPMAQQPVVPGLQFGSASWFP 375

[Close]

BLAST of Lsi07G014820 vs. ExPASy TrEMBL
Match: A0A1S3BNK6 (squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC103491800 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.9e-179
Identity = 317/349 (90.83%), Postives = 327/349 (93.70%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGSQNQTC 60
           MDW WGKFSGEP FPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHG+QNQTC
Sbjct: 1   MDWVWGKFSGEPNFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGNQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVRTE 180
           RKRLDGHNRRRRKPQPES+FMSSRDFLSNCKGPIVLQFSDQQIHHV DE+GR+LWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRSLWPVRTE 180

Query: 181 GEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFSQQLPDVISLGS 240
           GE+KSS+VP NSSAYFSYGRGDNK+LPFFLHKNG RQ KQMVSSQLSF+QQLPDVIS GS
Sbjct: 181 GEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLPDVISQGS 240

Query: 241 EVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSS 300
           EV N KPV TDTSPEDSGCALYLLSS  VQAH DAGLSSLVQSHLSVPVQT ETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISWE 350
           LSDFSGSF SKDKPV      S+L LEMEEESDGLFQ+EAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPV-----SSQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of Lsi07G014820 vs. ExPASy TrEMBL
Match: A0A5D3C4M7 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001560 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178
Identity = 316/349 (90.54%), Postives = 326/349 (93.41%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGSQNQTC 60
           MDW WGKFSGEP FPENKQNPPSSFSDSIGSNK SSQESSSSHGSSKRTRLLHG+QNQTC
Sbjct: 1   MDWVWGKFSGEPNFPENKQNPPSSFSDSIGSNKDSSQESSSSHGSSKRTRLLHGNQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVRTE 180
           RKRLDGHNRRRRKPQPES+FMSSRDFLSNCKGPIVLQFSDQQIHHV DE+GR+LWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRSLWPVRTE 180

Query: 181 GEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFSQQLPDVISLGS 240
           GE+KSS+VP NSSAYFSYGRGDNK+LPFFLHKNG RQ KQMVSSQLSF+QQLPDVIS GS
Sbjct: 181 GEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLPDVISQGS 240

Query: 241 EVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSS 300
           EV N KPV TDTSPEDSGCALYLLSS  VQAH DAGLSSLVQSHLSVPVQT ETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISWE 350
           LSDFSGSF SKDKPV      S+L LEMEEESDGLFQ+EAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPV-----SSQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of Lsi07G014820 vs. ExPASy TrEMBL
Match: A0A0A0L895 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G567830 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.6e-178
Identity = 314/349 (89.97%), Postives = 327/349 (93.70%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGSQNQTC 60
           MDWGWGKFSGEPIFPENKQNPPS+FSDSIGSNKGSSQESSSSHGSSKRTRLLH +QNQTC
Sbjct: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVRTE 180
           RKRLDGHNRRRRKPQPES+FMSS DFLSNCKGPIVLQFSDQQIHHV +E+GR+LWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180

Query: 181 GEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFSQQLPDVISLGS 240
           GE+KSS+VP NSSAYFSYGRGDNK+LPFFLHKNG RQ KQ+VSSQLSF+QQLP+VIS GS
Sbjct: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240

Query: 241 EVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSS 300
           EV N KPV TDTSPEDSGCALYLLSS  VQAH DAGLSSLVQSHLSVPVQT ETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISWE 350
           LSDFSGSF SKDKPV      S+L LEMEEESDGLFQSEAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPV-----SSQLGLEMEEESDGLFQSEAPHKFPISWE 344

[Close]

BLAST of Lsi07G014820 vs. ExPASy TrEMBL
Match: A0A6J1FA23 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111442201 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.3e-151
Identity = 286/362 (79.01%), Postives = 312/362 (86.19%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQN--PPSSFSDSIGSN--------KGSSQESSSSHGSSKRTR 60
           MDWGWG  SG+P F E      PP+SFSDSIGS+        +GSSQESSSS+GSSKRTR
Sbjct: 1   MDWGWGTLSGKPTFREKNHTPPPPTSFSDSIGSSNNNEEPILEGSSQESSSSNGSSKRTR 60

Query: 61  LLHGSQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSL 120
           +L G+QNQ+CLVDGCD+DL NCK+YHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFH L
Sbjct: 61  ILQGTQNQSCLVDGCDSDLKNCKEYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHPL 120

Query: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDEL 180
           GEFDEVKRSCRKRLDGHNRRRRKPQPES+FMSSRDFLSNCKGPIVLQFS+QQI HVPDE 
Sbjct: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSNQQI-HVPDEH 180

Query: 181 GRTLWPVRTEGEEKSSIVPPNSSAYFSY--GRGDNKQLPFFLHKNGTRQGKQMVSSQLSF 240
           GR+LW +R    E++S+VPPNSSAYFSY  G GDN++LPFFLHKNGTRQGKQMVSS+L F
Sbjct: 181 GRSLWSMR---PEETSMVPPNSSAYFSYGGGGGDNEELPFFLHKNGTRQGKQMVSSRLCF 240

Query: 241 SQQLPDVISLGSEVGNPK-PVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSV 300
           +QQLPD IS GSEVG+ K  VPT+TSP DSGCALYLLSS     HPDAGLSSLVQSHLS+
Sbjct: 241 NQQLPDAISQGSEVGSMKQAVPTNTSPVDSGCALYLLSS-----HPDAGLSSLVQSHLSL 300

Query: 301 PVQTQETELHFSSLSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPIS 350
           PVQT ETELHFSSLSDFS SFGSKDKPVC+TNL + L LEM E SDGLFQSEAPHKFPIS
Sbjct: 301 PVQTPETELHFSSLSDFSASFGSKDKPVCETNLDNGLELEM-EASDGLFQSEAPHKFPIS 352

[Close]

BLAST of Lsi07G014820 vs. ExPASy TrEMBL
Match: A0A6J1J818 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111482117 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.2e-151
Identity = 284/361 (78.67%), Postives = 310/361 (85.87%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQN--PPSSFSDSIGSN--------KGSSQESSSSHGSSKRTR 60
           MDWGWG  SG+P F E      PP+SFSDSIGS+        +GSSQESSSS+GSSKRTR
Sbjct: 1   MDWGWGTLSGKPTFREKNHTPPPPTSFSDSIGSSNNNEEPILEGSSQESSSSNGSSKRTR 60

Query: 61  LLHGSQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSL 120
            L G+QNQ+CLVDGCD+DL NCK+YHRRHRVCD HSKTPVVMVRGEEKRFCQQCSRFH L
Sbjct: 61  TLQGTQNQSCLVDGCDSDLKNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHPL 120

Query: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDEL 180
           GEFDEVKRSCRKRLDGHNRRRRKPQPES+FMSSRDFLSNCKGPIVLQFS+QQI HVPDE 
Sbjct: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSNQQI-HVPDEH 180

Query: 181 GRTLWPVRTEGEEKSSIVPPNSSAYFSY-GRGDNKQLPFFLHKNGTRQGKQMVSSQLSFS 240
           GR LW +R    E++S+VPPNSSAYFSY G GDN++LPFFLHKNGTRQGKQMVSS+L F+
Sbjct: 181 GRNLWSMR---PEETSMVPPNSSAYFSYGGEGDNEELPFFLHKNGTRQGKQMVSSRLCFN 240

Query: 241 QQLPDVISLGSEVGNPK-PVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVP 300
           QQLPD IS GSEVG+ K  VPT+TSP DSGCALYLLSS     HPDAGLSSL+QSHLS+P
Sbjct: 241 QQLPDAISQGSEVGSQKQAVPTNTSPVDSGCALYLLSS-----HPDAGLSSLIQSHLSLP 300

Query: 301 VQTQETELHFSSLSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISW 350
           VQT ETELHFSSLSDFS SFGSKDKPVC+TNL + LVLEM E SDGLFQSEAPHKFP+SW
Sbjct: 301 VQTPETELHFSSLSDFSASFGSKDKPVCETNLDNGLVLEM-EASDGLFQSEAPHKFPVSW 351

[Close]

BLAST of Lsi07G014820 vs. NCBI nr
Match: XP_038877944.1 (squamosa promoter-binding-like protein 13A [Benincasa hispida])

HSP 1 Score: 672.9 bits (1735), Expect = 1.5e-189
Identity = 328/349 (93.98%), Postives = 337/349 (96.56%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGSQNQTC 60
           MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKR RLLHGSQNQTC
Sbjct: 104 MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRIRLLHGSQNQTC 163

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVV+VRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 164 LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVLVRGEEKRFCQQCSRFHSLGEFDEVKRSC 223

Query: 121 RKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVRTE 180
           RKRLDGHNRRRRKPQPES+FMSS DFLSNCKGPIVLQFSDQQIHHVPDELGR+LWPVRTE
Sbjct: 224 RKRLDGHNRRRRKPQPESLFMSSTDFLSNCKGPIVLQFSDQQIHHVPDELGRSLWPVRTE 283

Query: 181 GEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFSQQLPDVISLGS 240
           GEEKSS+VPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSF+QQLPDVIS GS
Sbjct: 284 GEEKSSMVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFNQQLPDVISQGS 343

Query: 241 EVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSS 300
           E+GN KPVPTDTS EDSGCALYLLSSH VQAHPDAGLS+LVQSHLSVP+QT ETEL FSS
Sbjct: 344 EMGNQKPVPTDTSLEDSGCALYLLSSHQVQAHPDAGLSTLVQSHLSVPIQTHETELDFSS 403

Query: 301 LSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISWE 350
            SDFSGSFGSKDKPVCKTNLHSE VLEMEEESDGLF+ EAPHKFPI WE
Sbjct: 404 PSDFSGSFGSKDKPVCKTNLHSESVLEMEEESDGLFRREAPHKFPIYWE 452

[Close]

BLAST of Lsi07G014820 vs. NCBI nr
Match: XP_008450118.1 (PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo])

HSP 1 Score: 638.3 bits (1645), Expect = 4.0e-179
Identity = 317/349 (90.83%), Postives = 327/349 (93.70%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGSQNQTC 60
           MDW WGKFSGEP FPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHG+QNQTC
Sbjct: 1   MDWVWGKFSGEPNFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGNQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVRTE 180
           RKRLDGHNRRRRKPQPES+FMSSRDFLSNCKGPIVLQFSDQQIHHV DE+GR+LWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRSLWPVRTE 180

Query: 181 GEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFSQQLPDVISLGS 240
           GE+KSS+VP NSSAYFSYGRGDNK+LPFFLHKNG RQ KQMVSSQLSF+QQLPDVIS GS
Sbjct: 181 GEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLPDVISQGS 240

Query: 241 EVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSS 300
           EV N KPV TDTSPEDSGCALYLLSS  VQAH DAGLSSLVQSHLSVPVQT ETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISWE 350
           LSDFSGSF SKDKPV      S+L LEMEEESDGLFQ+EAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPV-----SSQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of Lsi07G014820 vs. NCBI nr
Match: KAA0042930.1 (squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa] >TYK05329.1 squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa])

HSP 1 Score: 635.6 bits (1638), Expect = 2.6e-178
Identity = 316/349 (90.54%), Postives = 326/349 (93.41%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGSQNQTC 60
           MDW WGKFSGEP FPENKQNPPSSFSDSIGSNK SSQESSSSHGSSKRTRLLHG+QNQTC
Sbjct: 1   MDWVWGKFSGEPNFPENKQNPPSSFSDSIGSNKDSSQESSSSHGSSKRTRLLHGNQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVRTE 180
           RKRLDGHNRRRRKPQPES+FMSSRDFLSNCKGPIVLQFSDQQIHHV DE+GR+LWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRSLWPVRTE 180

Query: 181 GEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFSQQLPDVISLGS 240
           GE+KSS+VP NSSAYFSYGRGDNK+LPFFLHKNG RQ KQMVSSQLSF+QQLPDVIS GS
Sbjct: 181 GEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLPDVISQGS 240

Query: 241 EVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSS 300
           EV N KPV TDTSPEDSGCALYLLSS  VQAH DAGLSSLVQSHLSVPVQT ETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISWE 350
           LSDFSGSF SKDKPV      S+L LEMEEESDGLFQ+EAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPV-----SSQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of Lsi07G014820 vs. NCBI nr
Match: XP_004148013.1 (squamosa promoter-binding-like protein 13A [Cucumis sativus] >KGN58165.1 hypothetical protein Csa_017531 [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 7.5e-178
Identity = 314/349 (89.97%), Postives = 327/349 (93.70%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGSQNQTC 60
           MDWGWGKFSGEPIFPENKQNPPS+FSDSIGSNKGSSQESSSSHGSSKRTRLLH +QNQTC
Sbjct: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVRTE 180
           RKRLDGHNRRRRKPQPES+FMSS DFLSNCKGPIVLQFSDQQIHHV +E+GR+LWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180

Query: 181 GEEKSSIVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFSQQLPDVISLGS 240
           GE+KSS+VP NSSAYFSYGRGDNK+LPFFLHKNG RQ KQ+VSSQLSF+QQLP+VIS GS
Sbjct: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240

Query: 241 EVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETELHFSS 300
           EV N KPV TDTSPEDSGCALYLLSS  VQAH DAGLSSLVQSHLSVPVQT ETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPISWE 350
           LSDFSGSF SKDKPV      S+L LEMEEESDGLFQSEAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPV-----SSQLGLEMEEESDGLFQSEAPHKFPISWE 344

[Close]

BLAST of Lsi07G014820 vs. NCBI nr
Match: XP_022935263.1 (squamosa promoter-binding-like protein 13A [Cucurbita moschata])

HSP 1 Score: 545.8 bits (1405), Expect = 2.7e-151
Identity = 286/362 (79.01%), Postives = 312/362 (86.19%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQN--PPSSFSDSIGSN--------KGSSQESSSSHGSSKRTR 60
           MDWGWG  SG+P F E      PP+SFSDSIGS+        +GSSQESSSS+GSSKRTR
Sbjct: 1   MDWGWGTLSGKPTFREKNHTPPPPTSFSDSIGSSNNNEEPILEGSSQESSSSNGSSKRTR 60

Query: 61  LLHGSQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSL 120
           +L G+QNQ+CLVDGCD+DL NCK+YHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFH L
Sbjct: 61  ILQGTQNQSCLVDGCDSDLKNCKEYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHPL 120

Query: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDEL 180
           GEFDEVKRSCRKRLDGHNRRRRKPQPES+FMSSRDFLSNCKGPIVLQFS+QQI HVPDE 
Sbjct: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSNQQI-HVPDEH 180

Query: 181 GRTLWPVRTEGEEKSSIVPPNSSAYFSY--GRGDNKQLPFFLHKNGTRQGKQMVSSQLSF 240
           GR+LW +R    E++S+VPPNSSAYFSY  G GDN++LPFFLHKNGTRQGKQMVSS+L F
Sbjct: 181 GRSLWSMR---PEETSMVPPNSSAYFSYGGGGGDNEELPFFLHKNGTRQGKQMVSSRLCF 240

Query: 241 SQQLPDVISLGSEVGNPK-PVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSV 300
           +QQLPD IS GSEVG+ K  VPT+TSP DSGCALYLLSS     HPDAGLSSLVQSHLS+
Sbjct: 241 NQQLPDAISQGSEVGSMKQAVPTNTSPVDSGCALYLLSS-----HPDAGLSSLVQSHLSL 300

Query: 301 PVQTQETELHFSSLSDFSGSFGSKDKPVCKTNLHSELVLEMEEESDGLFQSEAPHKFPIS 350
           PVQT ETELHFSSLSDFS SFGSKDKPVC+TNL + L LEM E SDGLFQSEAPHKFPIS
Sbjct: 301 PVQTPETELHFSSLSDFSASFGSKDKPVCETNLDNGLELEM-EASDGLFQSEAPHKFPIS 352

[Close]

BLAST of Lsi07G014820 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-35
Identity = 118/305 (38.69%), Postives = 155/305 (50.82%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSSFSD-----SIGSNKGS--SQESSSSHGSSKRTRLLHGSQNQ-- 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR      NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVR 187
           SCRKRLDGHNRRRRKPQPE +   + +F +  +G  +L+FS          +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEEKSSI-VPPNSSAYFSYGRGDNKQLPFFLHKNGTR-QGKQMVSSQLSFSQQLPDVI 247
             G    S+ V  N S   SYG+  +  +     K G         +S  S ++Q P + 
Sbjct: 220 --GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ 279

Query: 248 SLGSEVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETEL 302
              S           +   DS CAL LLSS        + +  L+Q  LS+  +  ET  
Sbjct: 280 EEESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVF 329

[Close]

BLAST of Lsi07G014820 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-35
Identity = 118/305 (38.69%), Postives = 155/305 (50.82%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSSFSD-----SIGSNKGS--SQESSSSHGSSKRTRLLHGSQNQ-- 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR      NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVR 187
           SCRKRLDGHNRRRRKPQPE +   + +F +  +G  +L+FS          +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEEKSSI-VPPNSSAYFSYGRGDNKQLPFFLHKNGTR-QGKQMVSSQLSFSQQLPDVI 247
             G    S+ V  N S   SYG+  +  +     K G         +S  S ++Q P + 
Sbjct: 220 --GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ 279

Query: 248 SLGSEVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETEL 302
              S           +   DS CAL LLSS        + +  L+Q  LS+  +  ET  
Sbjct: 280 EEESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVF 329

[Close]

BLAST of Lsi07G014820 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-35
Identity = 118/305 (38.69%), Postives = 155/305 (50.82%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSSFSD-----SIGSNKGS--SQESSSSHGSSKRTRLLHGSQNQ-- 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR      NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESMFMSSRDFLSNCKGPIVLQFSDQQIHHVPDELGRTLWPVR 187
           SCRKRLDGHNRRRRKPQPE +   + +F +  +G  +L+FS          +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEEKSSI-VPPNSSAYFSYGRGDNKQLPFFLHKNGTR-QGKQMVSSQLSFSQQLPDVI 247
             G    S+ V  N S   SYG+  +  +     K G         +S  S ++Q P + 
Sbjct: 220 --GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQ 279

Query: 248 SLGSEVGNPKPVPTDTSPEDSGCALYLLSSHPVQAHPDAGLSSLVQSHLSVPVQTQETEL 302
              S           +   DS CAL LLSS        + +  L+Q  LS+  +  ET  
Sbjct: 280 EEESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVF 329

[Close]

BLAST of Lsi07G014820 vs. TAIR 10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-29
Identity = 79/175 (45.14%), Postives = 103/175 (58.86%), Query Frame = 0


Query: 34  GSSQESSSSHG---SSKRTRLLH-GSQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTP 93
           G+  + +SS G    SK++R  +  SQN  C V GC  DL++ KDYH+RHRVC++HSKT 
Sbjct: 94  GNDDDDTSSRGFALPSKKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTS 153

Query: 94  VVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKP-------QPESMFMS 153
           VV+V G E+RFCQQCSRFH L EFD+ KRSCR+RL GHN RRRKP       +   +  +
Sbjct: 154 VVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKPAFYFLPGKRHKLLRT 213

Query: 154 SRD-----FLSNCKGPIVLQFSDQQIHHVPDELG-RTLWPVRTEGEEKSSIVPPN 192
           S+D     FL N    +   F    ++ V DE   RT   V  + E   S+ P N
Sbjct: 214 SQDVVGNKFLENSSLVLPESFPGSLLYRVIDEDDHRTSRLVSFKDEPTCSMFPTN 268

[Close]

BLAST of Lsi07G014820 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 123.2 bits (308), Expect = 4.0e-28
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 60  CLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRS 119
           C +DGC+ DL++ KDYHR+HRVC++HSK P V+V G E+RFCQQCSRFH++ EFDE KRS
Sbjct: 176 CQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRS 235

Query: 120 CRKRLDGHNRRRRKPQPESMFMSSRDF 147
           CRKRL  HN RRRKPQ      S R F
Sbjct: 236 CRKRLSHHNARRRKPQGVFPLNSERVF 262

The following BLAST results are available for this feature:

BLAST of Lsi07G014820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	2.8e-34	38.69	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	2.8e-34	38.69	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q0J0K1	1.8e-33	65.09	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q2R3Y1	6.9e-33	41.45	Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japoni...	[more]
Q49I55	2.0e-32	33.64	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]

BLAST of Lsi07G014820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNK6	1.9e-179	90.83	squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC1034918...	[more]
A0A5D3C4M7	1.2e-178	90.54	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0L895	3.6e-178	89.97	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G567830 PE...	[more]
A0A6J1FA23	1.3e-151	79.01	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1J818	2.2e-151	78.67	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Lsi07G014820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877944.1	1.5e-189	93.98	squamosa promoter-binding-like protein 13A [Benincasa hispida]	[more]
XP_008450118.1	4.0e-179	90.83	PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo]	[more]
KAA0042930.1	2.6e-178	90.54	squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa] >TYK05329....	[more]
XP_004148013.1	7.5e-178	89.97	squamosa promoter-binding-like protein 13A [Cucumis sativus] >KGN58165.1 hypothe...	[more]
XP_022935263.1	2.7e-151	79.01	squamosa promoter-binding-like protein 13A [Cucurbita moschata]	[more]

BLAST of Lsi07G014820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	2.0e-35	38.69	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	2.0e-35	38.69	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	2.0e-35	38.69	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G69170.1	6.2e-29	45.14	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G27370.1	4.0e-28	64.37	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 52..121 e-value: 9.4E-32 score: 111.0
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 59..139
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 60..133 e-value: 2.2E-30 score: 104.8
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 57..134 score: 31.496038
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 52..133 e-value: 7.5E-36 score: 120.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	PANTHER	PTHR31251:SF93	TRANSCRIPTION FACTOR SBP FAMILY-RELATED	coord: 33..349
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 33..349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G014820.1	Lsi07G014820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding