Lsi07G014780 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G014780
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	YrdC-like domain-containing protein
Location	chr07: 21548291 .. 21552004 (+)
RNA-Seq Expression	Lsi07G014780
Synteny	Lsi07G014780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAGATAAATATATAAATATATAAAATCAAATTAAAATGTGACGTGGCATTCCAGGTGGGAAGTTCTATCTATGATGTGCTTCGTCTCCGATCGCAGCTTCCGATTCTTTTGCTCTCAGTTCCTAATTCCGGCGATGCACTGCCACTGATTCCCCAATCTCCAAAATGATCGTCAATGTCAAATCCAACGTATATTCTTCTGCTGCTTCTTCTCTCTCTTCTGTTCGATCTTTCGCGCTAATACGGTTCCCTTCCCCTCCATCTGCCATTCGTTTCGACGGTTCTGAAACTTCACGGCGGCTCCAGGTCCTCGCCATGGTTGTCAAGCGGAGTCCTAAGCGCCTCAAATACTCGGCTCCACGCTTCACTAAGGTCCTCTTCTTGCTAAGTACTCCTTTTTTATTTTATTTTATTTTATTTTATTTTTTTCTTTTTTTCAGTTTGATTATGCCCTCGTTCCTACTTATTCTATATGAAATCTAGTGCTGGAGGTAGGATTGTGTAGGTGAATTAAGCATTTAGGCTGTTATCGTCGCTTATTTATTTATTTTTACAGTCTAGATTGATAATTAGTGAATTGAGCAGGAGATTGCAGGGAGTATAGAAAGGATTATTGTAAGATTTGGACTGTTGGAAACATTAGTGATGTTGCCTACTATTGACAGATTAATCTTTTTTCTTCTGTGTGTGTGCTTTTTGTGTGTTTCTTGTTGGGAGGGGGCGATATAATATGAAACACTAGTCTGCTTCCACCACGTGATCATATTGCAGTTTGGGATGTTTTATTGCTAGTTTTTGTTGGGAGTTAATTCAGTAGGGAATGAAATTTGGAAATTAATGAAGTTATTAGACTTGTGTTTATTGATATGCTTAAAATTACTATGGTCTTTACCAGGAAGGGAGCTTGCTATATGTCAAAGCTGAATCAGGGGAGGACGGCTGGAAATTAGAACCTATTGTTAATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCGACGGATACAGTGTATTTCTCTCTTACTTAATTTGACTCTCACCTTTTGTCATAGCTGACTCTTTAGTTGAAATTAAACACTTGAATGAGTAAATTTGTTCATAGTTAGTAAGAATCATATTTTCACTTTTTGTGTCATTCAACCCAGAATTTAGGTTGTACTACCTCTGTTGGGAACAAGCCTCAAACTTCTGCAATGAATTTTTGGTTTTCCATAAAGTATACTTTACTTGGAATATTATTAGTAAGGATCATATCTTTTGCTTGATAGATGAGAGTTCTCGAGGAGATGTAGAAGGTTCAATTTTGTGAATTTAAATTTTACAGTGACAAGGAAAGCAACAGAAAAGAAATTTTCTCATTCTCACTTTAATTATTATGCTTTTGGTGGATCATCTAATGAGTGTTGTTGACTTCACAGCATTTTTGTTCCATTCCGTATATCTCTCTTTGTCTCTTCCTTTCAACTTTAACGGGTGTGTATGCTTATATTTTTCAAGGTATGCAATAGTTTGTGATTTGAAGAACCCCTCAGCCATTGAACGAATGCGAAGGTTGAAGTTGTTAATTTATTCTGCTAGATGTATTTGGTTAGTTACTTCAGCTTCTATGCACTGGTGTTAAAAGTTTTTTCGTGTTGTTTAATGCAGGATCAAGAATATAGAGCCTTCAAAGGTATGGTTATTCTTTACAATCTCTTTTATGTGGTTTACGATAATGCTCATATGGCCCTTCAAACTGTTGAACTACAATGCTCAAATGCACATAATTAAGATACTGAACAAGATGATTTATTCTACTTACTATCGTTCATGTCTGTCTTTCTACAACTTACCTTTTCATTTTTCAATTATGCTTCTTAATTTTTACTTGTAATTAACTATGCAGCCTCTGAGCATTTTGTGCCACTCCTTCCGGGACATTGACAAATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAACATATTTCGCATGGTTAAGCATTGCCTACCTGGACCAGTGAGTGGTTCTCCTAATCCTGCTTTGTGATGATAACTATATATTCTCCCTCCTTAGGATGGTGTCCCAAATGAGCTCTCTAGTGCCTGTAGCTTCCATAATCAATCACGTAGATTTGAAAAAACATTTTCTGGTGTTGTCCTATGGATATCGTGATATATTATAGTTCATAGTGAAATTCTCAATGTACATTGAACTCTTTAACTAGAGCAATTGAATTTTGAGAGAGTTTTTGTGTAACAGTATACCTTCATCTTGACTGCAAGCAAAGAGCTGCCTAAACACTGCATAAGGTATGGCACGACCACTGCTAAATATGCATCAAGGAAGAATGTTGGTGTGCGCATTCCTGATGATACAATATGTCAAGCAATACTGGAAAAGATGGATGCCCCATTAATATCCACAAGGTTAGTATAATTAATACTCTTCTAATTCTCTCTCCCCTCTCAGTACATCCCTTGATTTGCTTAGAGAACTGAAAGACTTTCTGGATCGATCATCTATTTTTCATGCGACAATTTCCTCTGAGTTTTTAATTTGGTGTAATTGAAGATCATTGTTTTAACAATATTCTCTCCACTCTGAATCCAGTTCTAGATTGATCACTGGAAGGGGAGACTGTTTGTGTTTGTATTAATTGATTTAAGATTGCTTTAGATTATCAATTTCTTAAACTAGTGAAAGGTAAATAAGTATCTCAGAAGTGATGATTTGTTCAAACTATACGTTTACCCTTCTTTCAGTGTCAAATGCCCGAAGGAAAATGAGTGGTTGCTCGATCCAGTTGTCATAGCTGATATCTATGGACAAGAGGTATGAGTAAATCTTACAGAGGCAGAGTGATTGTTTATGCTAATATCTTTAGTTATACCATTTTCTTTCCCTGTAATCGGGTTGTTTGCCTCAAATAGGGTCTGGATTTTGTGGTGGATGGTGGTGTCAGAGTGGCAGATCCATCCACTGTAGTAGATATGACCATCACTCCTTCAAAGATTTTGCGGCAAGGGAAGGTAATTAATCAACCATTTCATTTTCAGTCTAATACGCCCTAAATTACGATTAACACACCTCATCTCTTGCTATCTGATAACATATCGATCCGTATGGTAATGAATAGTCCTGTCATTCAGTCAAAAACAACATTTTCTATTAAATCCAAATGAAACAAAGTCAGAAGTTGATAATTCATTTCATTACTGTCCTGATCCCGTGATCAATCCTCATGGAAATGGAATGAGTGCCATAGTTTCATGTCTCTGTTGGATTTGGATGATGAACCCTTTTCCACTGTCTTCCCCATTTTTGCTTGCATGATTTGCAACATCCAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGATGACGGCGAACCGACTGTAGGTGAAGATATCCGCATCTGACCTGCCATTTTGTAGATAATCCACTGAACATATTGCATGGAAGACATGATCCAGTTCCATTTAACAAACAAATCAGCTGGAGTTTGTACAGTGTTTGTTCTTGGGATATAAACAATAGGAATAGGAAGGTGTAAAGAAAACTGAAAGGGGATCCTTTCCTTTCAAAGTGGAAGACCAAGTGTGGCTATACTGCTTGTCTTCCAGGTTTTTTCTCAACTTGAAAATTAGAATCTCTTTTACCTATGTAACTCGTATCATATGCAAATGCAAATGCAATGCAATCCTCATTCTACATTCTCTCTT

mRNA sequence

AATAGATAAATATATAAATATATAAAATCAAATTAAAATGTGACGTGGCATTCCAGGTGGGAAGTTCTATCTATGATGTGCTTCGTCTCCGATCGCAGCTTCCGATTCTTTTGCTCTCAGTTCCTAATTCCGGCGATGCACTGCCACTGATTCCCCAATCTCCAAAATGATCGTCAATGTCAAATCCAACGTATATTCTTCTGCTGCTTCTTCTCTCTCTTCTGTTCGATCTTTCGCGCTAATACGGTTCCCTTCCCCTCCATCTGCCATTCGTTTCGACGGTTCTGAAACTTCACGGCGGCTCCAGGTCCTCGCCATGGTTGTCAAGCGGAGTCCTAAGCGCCTCAAATACTCGGCTCCACGCTTCACTAAGGAAGGGAGCTTGCTATATGTCAAAGCTGAATCAGGGGAGGACGGCTGGAAATTAGAACCTATTGTTAATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCGACGGATACAGTGTATGCAATAGTTTGTGATTTGAAGAACCCCTCAGCCATTGAACGAATGCGAAGGATCAAGAATATAGAGCCTTCAAAGCCTCTGAGCATTTTGTGCCACTCCTTCCGGGACATTGACAAATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAACATATTTCGCATGGTTAAGCATTGCCTACCTGGACCATATACCTTCATCTTGACTGCAAGCAAAGAGCTGCCTAAACACTGCATAAGGTATGGCACGACCACTGCTAAATATGCATCAAGGAAGAATGTTGGTGTGCGCATTCCTGATGATACAATATGTCAAGCAATACTGGAAAAGATGGATGCCCCATTAATATCCACAAGTGTCAAATGCCCGAAGGAAAATGAGTGGTTGCTCGATCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTTTGTGGTGGATGGTGGTGTCAGAGTGGCAGATCCATCCACTGTAGTAGATATGACCATCACTCCTTCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGATGACGGCGAACCGACTGTAGGTGAAGATATCCGCATCTGACCTGCCATTTTGTAGATAATCCACTGAACATATTGCATGGAAGACATGATCCAGTTCCATTTAACAAACAAATCAGCTGGAGTTTGTACAGTGTTTGTTCTTGGGATATAAACAATAGGAATAGGAAGGTGTAAAGAAAACTGAAAGGGGATCCTTTCCTTTCAAAGTGGAAGACCAAGTGTGGCTATACTGCTTGTCTTCCAGGTTTTTTCTCAACTTGAAAATTAGAATCTCTTTTACCTATGTAACTCGTATCATATGCAAATGCAAATGCAATGCAATCCTCATTCTACATTCTCTCTT

Coding sequence (CDS)

ATGATCGTCAATGTCAAATCCAACGTATATTCTTCTGCTGCTTCTTCTCTCTCTTCTGTTCGATCTTTCGCGCTAATACGGTTCCCTTCCCCTCCATCTGCCATTCGTTTCGACGGTTCTGAAACTTCACGGCGGCTCCAGGTCCTCGCCATGGTTGTCAAGCGGAGTCCTAAGCGCCTCAAATACTCGGCTCCACGCTTCACTAAGGAAGGGAGCTTGCTATATGTCAAAGCTGAATCAGGGGAGGACGGCTGGAAATTAGAACCTATTGTTAATCTTCTAAAAGAGGGTGCAGTTGGGGTTATTCCGACGGATACAGTGTATGCAATAGTTTGTGATTTGAAGAACCCCTCAGCCATTGAACGAATGCGAAGGATCAAGAATATAGAGCCTTCAAAGCCTCTGAGCATTTTGTGCCACTCCTTCCGGGACATTGACAAATATACTACAGGGTTTCCTCGTGGTGATGGCCAAGGCCATTCAAACATATTTCGCATGGTTAAGCATTGCCTACCTGGACCATATACCTTCATCTTGACTGCAAGCAAAGAGCTGCCTAAACACTGCATAAGGTATGGCACGACCACTGCTAAATATGCATCAAGGAAGAATGTTGGTGTGCGCATTCCTGATGATACAATATGTCAAGCAATACTGGAAAAGATGGATGCCCCATTAATATCCACAAGTGTCAAATGCCCGAAGGAAAATGAGTGGTTGCTCGATCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTTTGTGGTGGATGGTGGTGTCAGAGTGGCAGATCCATCCACTGTAGTAGATATGACCATCACTCCTTCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGATGACGGCGAACCGACTGTAGGTGAAGATATCCGCATCTGA

Protein sequence

MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIRI

Homology

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BLAST of Lsi07G014780 vs. ExPASy Swiss-Prot
Match: P0AFR5 (Uncharacterized protein YciO OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yciO PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.0e-24
Identity = 61/203 (30.05%), Postives = 112/203 (55.17%), Query Frame = 0


Query: 91  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTT 150
           V ++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+ 
Sbjct: 21  VEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF 80

Query: 151 GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIP 210
                     +  FR++K+  PG YTFIL  +KE+P+  ++          RK +G+R+P
Sbjct: 81  --------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGMRVP 140

Query: 211 DDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPST 270
            + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+T
Sbjct: 141 SNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKQVDLIIHGGYLGQKPTT 200

Query: 271 VVDMTITPSKILRQGKGARLPWM 294
           V+D+T     ++R+G G   P++
Sbjct: 201 VIDLTDDTPVVVREGVGDVKPFL 206

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BLAST of Lsi07G014780 vs. ExPASy Swiss-Prot
Match: P0AFR4 (Uncharacterized protein YciO OS=Escherichia coli (strain K12) OX=83333 GN=yciO PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.0e-24
Identity = 61/203 (30.05%), Postives = 112/203 (55.17%), Query Frame = 0


Query: 91  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTT 150
           V ++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+ 
Sbjct: 21  VEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF 80

Query: 151 GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIP 210
                     +  FR++K+  PG YTFIL  +KE+P+  ++          RK +G+R+P
Sbjct: 81  --------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGMRVP 140

Query: 211 DDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPST 270
            + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+T
Sbjct: 141 SNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKQVDLIIHGGYLGQKPTT 200

Query: 271 VVDMTITPSKILRQGKGARLPWM 294
           V+D+T     ++R+G G   P++
Sbjct: 201 VIDLTDDTPVVVREGVGDVKPFL 206

[Close]

BLAST of Lsi07G014780 vs. ExPASy Swiss-Prot
Match: P0AFR6 (Uncharacterized protein YciO OS=Shigella flexneri OX=623 GN=yciO PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.0e-24
Identity = 61/203 (30.05%), Postives = 112/203 (55.17%), Query Frame = 0


Query: 91  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTT 150
           V ++++G V V PTD+ YA+ C +++ +A+ER+ RI+ +      +++C    ++  Y+ 
Sbjct: 21  VEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSF 80

Query: 151 GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIP 210
                     +  FR++K+  PG YTFIL  +KE+P+  ++          RK +G+R+P
Sbjct: 81  --------VDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQ--------EKRKTIGMRVP 140

Query: 211 DDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPST 270
            + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+T
Sbjct: 141 SNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRL-EKQVDLIIHGGYLGQKPTT 200

Query: 271 VVDMTITPSKILRQGKGARLPWM 294
           V+D+T     ++R+G G   P++
Sbjct: 201 VIDLTDDTPVVVREGVGDVKPFL 206

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BLAST of Lsi07G014780 vs. ExPASy Swiss-Prot
Match: P45103 (Uncharacterized protein HI_1198 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1198 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.2e-24
Identity = 63/204 (30.88%), Postives = 113/204 (55.39%), Query Frame = 0


Query: 91  VNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSILCHSFRDIDKYTT 150
           V +L++G V V PTD+ YA+ C + +  A++R+  I+ +      +++C    ++  Y  
Sbjct: 21  VEILQKGGVIVYPTDSGYALGCMMGDKHAMDRIVAIRKLPEGHNFTLVCSDLSELSTY-- 80

Query: 151 GFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAKYASRKNVGVRIP 210
                  + ++  +R++K+  PG YTFILTA+KELP+  +         + RK +G+R+P
Sbjct: 81  ------ARVNNTAYRLIKNNTPGRYTFILTATKELPRRLMT--------SKRKTIGLRVP 140

Query: 211 DDTICQAILEKMDAPLISTSVKCP-KENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPS 270
           D+ I   +L  +  P++S S+  P +E+    DP  I D   +  +D ++ GG    +P+
Sbjct: 141 DNKIALDLLSALGEPILSCSLMLPNEEHTTQSDPEEIRDRL-EHQVDLIIHGGYLGQEPT 200

Query: 271 TVVDMTITPSKILRQGKGARLPWM 294
           TVVD+T     ILR+G G+  P++
Sbjct: 201 TVVDLTEESPVILREGSGSTAPFI 207

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BLAST of Lsi07G014780 vs. ExPASy Swiss-Prot
Match: Q86U90 (YrdC domain-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=YRDC PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.4e-13
Identity = 68/224 (30.36%), Postives = 103/224 (45.98%), Query Frame = 0


Query: 76  VKAESGE-DGW--KLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPS 135
           V+A S E  GW   L   V  L+ GAV  +PTDT+Y + C     +A+  + R+K    +
Sbjct: 56  VQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEA 115

Query: 136 KPLSILCHSFRDIDKY-TTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIR 195
           KPL++      D+ +Y     P G          ++K  LPGP T ++  S+EL K    
Sbjct: 116 KPLAVCLGRVADVYRYCRVRVPEG----------LLKDLLPGPVTLVMERSEELNKDLNP 175

Query: 196 YGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYG 255
           +            VG+RIPD    Q + +  + PL  TS     +    L+     D++ 
Sbjct: 176 FTPL---------VGIRIPDHAFMQDLAQMFEGPLALTSANLSSQAS-SLNVEEFQDLWP 235

Query: 256 QEGLDFVVDGGVRVAD--------PSTVVDMTITPSK--ILRQG 286
           Q  L  V+DGG ++ D         STVVD+++ P K  I+R G
Sbjct: 236 Q--LSLVIDGG-QIGDGQSPECRLGSTVVDLSV-PGKFGIIRPG 255

[Close]

BLAST of Lsi07G014780 vs. ExPASy TrEMBL
Match: A0A1S3BMX4 (uncharacterized protein YciO isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491794 PE=3 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 4.2e-162
Identity = 286/308 (92.86%), Postives = 294/308 (95.45%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAI 120
           KYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180
           ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT
Sbjct: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE 300
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PTVGEDIR 309
           P +GEDIR
Sbjct: 301 PNLGEDIR 308

[Close]

BLAST of Lsi07G014780 vs. ExPASy TrEMBL
Match: A0A0A0LBV9 (YrdC-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585350 PE=3 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.2e-158
Identity = 280/308 (90.91%), Postives = 291/308 (94.48%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MI+NVK  ++ S ASSLSS R+FA IRFPSPPSA  FDG ETSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAI 120
           KYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180
           ERM+RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILT
Sbjct: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDD+ICQAILEKMD PLISTSVK PKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE 300
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PTVGEDIR 309
           P +GEDIR
Sbjct: 301 PNIGEDIR 308

[Close]

BLAST of Lsi07G014780 vs. ExPASy TrEMBL
Match: A0A5D3C4N1 (YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001410 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.0e-155
Identity = 286/352 (81.25%), Postives = 294/352 (83.52%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTK--------------------------------------------EGSLLYV 120
           KYSAPRFTK                                            EGSL+YV
Sbjct: 61  KYSAPRFTKVLSLLTTPVCFSASLCPRSYLFYMKLLSLLLGIEYLVVQVELRQEGSLIYV 120

Query: 121 KAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLS 180
           KAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAIERMRRIKNIEPSKPLS
Sbjct: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMRRIKNIEPSKPLS 180

Query: 181 ILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT 240
           ILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT
Sbjct: 181 ILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT 240

Query: 241 AKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD 300
           AKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLD
Sbjct: 241 AKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWLLDPVVIADIYGQEGLD 300

Query: 301 FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR 309
           FVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Sbjct: 301 FVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNLGEDIR 352

[Close]

BLAST of Lsi07G014780 vs. ExPASy TrEMBL
Match: A0A6J1J9P6 (uncharacterized protein LOC111482522 OS=Cucurbita maxima OX=3661 GN=LOC111482522 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.7e-153
Identity = 277/302 (91.72%), Postives = 285/302 (94.37%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAA-SSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKR 60
           MIVNVKS+ Y SAA SSLSSVRSFA IRFPSPP A+RFDGS TSRRLQVLAM VKRSPKR
Sbjct: 1   MIVNVKSSGYPSAASSSLSSVRSFAPIRFPSPPRAVRFDGSRTSRRLQVLAMAVKRSPKR 60

Query: 61  LKYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSA 120
           LKYSAPRFTK+GSLLYVKAESGED WKLEPIV+LLKEGAVGVIPTDTVYAIVCDLKNPSA
Sbjct: 61  LKYSAPRFTKDGSLLYVKAESGEDAWKLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSA 120

Query: 121 IERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFIL 180
           IERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFIL
Sbjct: 121 IERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFIL 180

Query: 181 TASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEW 240
           TASKELPK  I YGTTTAK+ASRKNVGVRIPDD ICQA+LEKMDAPLISTSVKC KENEW
Sbjct: 181 TASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEW 240

Query: 241 LLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDG 300
           LLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP K+LRQGKGARLPWMVAE D 
Sbjct: 241 LLDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGARLPWMVAEGDD 300

Query: 301 EP 302
           EP
Sbjct: 301 EP 302

[Close]

BLAST of Lsi07G014780 vs. ExPASy TrEMBL
Match: A0A5A7TLP4 (YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004380 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.4e-149
Identity = 280/358 (78.21%), Postives = 290/358 (81.01%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTK--------------------------------------------EGSLLYV 120
           KYSAPRFTK                                            EGSL+YV
Sbjct: 61  KYSAPRFTKVLSLLTTPVCFSASLCPRSYLFYMKLLSLLLGIEYLVVQVELRQEGSLIYV 120

Query: 121 KAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPS---- 180
           KAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAIERMRR+K +  S    
Sbjct: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMRRLKLLICSGRIC 180

Query: 181 --KPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI 240
              PLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI
Sbjct: 181 IWLPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCI 240

Query: 241 RYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIY 300
           RYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIY
Sbjct: 241 RYGTTTAKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWLLDPVVIADIY 300

Query: 301 GQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR 309
           GQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Sbjct: 301 GQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNLGEDIR 358

[Close]

BLAST of Lsi07G014780 vs. NCBI nr
Match: XP_008450106.1 (PREDICTED: uncharacterized protein YciO isoform X1 [Cucumis melo])

HSP 1 Score: 580.5 bits (1495), Expect = 8.7e-162
Identity = 286/308 (92.86%), Postives = 294/308 (95.45%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAI 120
           KYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180
           ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT
Sbjct: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE 300
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PTVGEDIR 309
           P +GEDIR
Sbjct: 301 PNLGEDIR 308

[Close]

BLAST of Lsi07G014780 vs. NCBI nr
Match: XP_038877956.1 (uncharacterized protein YciO [Benincasa hispida])

HSP 1 Score: 579.7 bits (1493), Expect = 1.5e-161
Identity = 290/309 (93.85%), Postives = 294/309 (95.15%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MIVNVKS+VY S ASS SSVRS+A IRFP  PSAIRF GSETSRRLQVLA VVKRSPKRL
Sbjct: 1   MIVNVKSDVYPSTASSFSSVRSYAPIRFPPSPSAIRFHGSETSRRLQVLARVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAI 120
           KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVY IVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180
           ER+RRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT
Sbjct: 121 ERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDD ICQAILEKMDAPLISTSVK  KENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDAICQAILEKMDAPLISTSVKNLKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE 300
           LDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Sbjct: 241 LDPVVIADIYGEEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PTVGEDIRI 310
           PTVGEDIRI
Sbjct: 301 PTVGEDIRI 309

[Close]

BLAST of Lsi07G014780 vs. NCBI nr
Match: XP_004145661.1 (uncharacterized protein LOC101214648 isoform X2 [Cucumis sativus] >KGN58172.1 hypothetical protein Csa_017456 [Cucumis sativus])

HSP 1 Score: 568.2 bits (1463), Expect = 4.5e-158
Identity = 280/308 (90.91%), Postives = 291/308 (94.48%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MI+NVK  ++ S ASSLSS R+FA IRFPSPPSA  FDG ETSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVKPGLHPSTASSLSSSRAFAPIRFPSPPSATPFDGFETSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAI 120
           KYSAPRFTKEGSL+YVKAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLIYVKAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAI 120

Query: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180
           ERM+RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILT
Sbjct: 121 ERMQRIKNIEPTKPLSILCRSFRDIDKYTTGFPRGDGQGHSSIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWL 240
           ASKELPKHCIRYGTTTAKYASRKNVGVRIPDD+ICQAILEKMD PLISTSVK PKENEWL
Sbjct: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDSICQAILEKMDDPLISTSVKSPKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE 300
           LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D E
Sbjct: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDE 300

Query: 301 PTVGEDIR 309
           P +GEDIR
Sbjct: 301 PNIGEDIR 308

[Close]

BLAST of Lsi07G014780 vs. NCBI nr
Match: TYK05316.1 (yrdC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 559.3 bits (1440), Expect = 2.1e-155
Identity = 286/352 (81.25%), Postives = 294/352 (83.52%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MI+NV+SN++ S ASSLSS+RSFA IRFPSPPSA RFDG  TSRRLQVLAMVVKRSPKRL
Sbjct: 1   MIINVRSNLHPSTASSLSSLRSFAPIRFPSPPSASRFDGFRTSRRLQVLAMVVKRSPKRL 60

Query: 61  KYSAPRFTK--------------------------------------------EGSLLYV 120
           KYSAPRFTK                                            EGSL+YV
Sbjct: 61  KYSAPRFTKVLSLLTTPVCFSASLCPRSYLFYMKLLSLLLGIEYLVVQVELRQEGSLIYV 120

Query: 121 KAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLS 180
           KAESGEDGWKL+PIVNLLKEGAVGVIPTDTVY IVCDLKNPSAIERMRRIKNIEPSKPLS
Sbjct: 121 KAESGEDGWKLDPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERMRRIKNIEPSKPLS 180

Query: 181 ILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT 240
           ILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT
Sbjct: 181 ILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTT 240

Query: 241 AKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLD 300
           AKYASRKNVGVRIPDD ICQAILEKMD PLISTSVK PKENEWLLDPVVIADIYGQEGLD
Sbjct: 241 AKYASRKNVGVRIPDDAICQAILEKMDNPLISTSVKSPKENEWLLDPVVIADIYGQEGLD 300

Query: 301 FVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDIR 309
           FVVDGGVRVADPSTVVDMTITP KILRQGKGARLPWMVAE D EP +GEDIR
Sbjct: 301 FVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEGDDEPNLGEDIR 352

[Close]

BLAST of Lsi07G014780 vs. NCBI nr
Match: XP_023527501.1 (uncharacterized protein LOC111790710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 551.6 bits (1420), Expect = 4.3e-153
Identity = 275/301 (91.36%), Postives = 283/301 (94.02%), Query Frame = 0


Query: 1   MIVNVKSNVYSSAASSLSSVRSFALIRFPSPPSAIRFDGSETSRRLQVLAMVVKRSPKRL 60
           MI NVKS+VY SAASSLSSVRSFA IRFPS P  +RFDGS TSRRLQVLAM VKRSPKRL
Sbjct: 1   MIANVKSSVYPSAASSLSSVRSFAPIRFPSSPRTVRFDGSGTSRRLQVLAMAVKRSPKRL 60

Query: 61  KYSAPRFTKEGSLLYVKAESGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAI 120
           KYSAPRFTKEGSLLYVKAESGED WKLEPIV+LLKEGAVGVIPTDTVYAIVCDLKNPSAI
Sbjct: 61  KYSAPRFTKEGSLLYVKAESGEDAWKLEPIVDLLKEGAVGVIPTDTVYAIVCDLKNPSAI 120

Query: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILT 180
           ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILT
Sbjct: 121 ERMRRIKNIEPSKPLSILCHSFRDIDKYTTGFPCGDGQGHSNIFRMVKHCLPGPYTFILT 180

Query: 181 ASKELPKHCIRYGTTTAKYASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWL 240
           ASKELPK  I YGTTTAK+ASRKNVGVRIPDD ICQA+LEKMDAPLISTSVKC KENEWL
Sbjct: 181 ASKELPKQYIGYGTTTAKHASRKNVGVRIPDDAICQAVLEKMDAPLISTSVKCLKENEWL 240

Query: 241 LDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGE 300
           LDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITP K+LRQGKGA+LPWMVAE D E
Sbjct: 241 LDPVVIADIYGKEGLDFVVDGGVRVADPSTVVDMTITPPKLLRQGKGAKLPWMVAEGDDE 300

Query: 301 P 302
           P
Sbjct: 301 P 301

[Close]

BLAST of Lsi07G014780 vs. TAIR 10
Match: AT3G01920.1 (DHBP synthase RibB-like alpha/beta domain )

HSP 1 Score: 401.7 bits (1031), Expect = 5.2e-112
Identity = 194/289 (67.13%), Postives = 231/289 (79.93%), Query Frame = 0


Query: 25  LIRFPSP-----PSAIRFDGSETSRRLQVLAMVVKRSPKRLKYSAPRFTKEGSLLYVKAE 84
           L+  PSP     PS +    S + RR  ++A+  KRSPKRLKYS PRFTKEG L+Y++ +
Sbjct: 16  LLLLPSPMTHRRPSTLPSTASLSPRR-YIVALAAKRSPKRLKYSTPRFTKEGELVYIEVD 75

Query: 85  -SGEDGWKLEPIVNLLKEGAVGVIPTDTVYAIVCDLKNPSAIERMRRIKNIEPSKPLSIL 144
             G D WKL+P+++LLK+GAVGVIPTDTVYAI CD KN SA+ER+RRIK IE SKPLSIL
Sbjct: 76  PCGVDSWKLQPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSIL 135

Query: 145 CHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTASKELPKHCIRYGTTTAK 204
           C S RDID +T GFPRGDG GH+N+FR VK CLPGPYTFILTASKELPK C+ YGTT+ K
Sbjct: 136 CRSLRDIDTFTMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVK 195

Query: 205 YASRKNVGVRIPDDTICQAILEKMDAPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFV 264
           YASRKNVGVRI DD +CQAIL++MDAPLI TSVK PKENEW++DP  I DIYG EGLDFV
Sbjct: 196 YASRKNVGVRISDDALCQAILQQMDAPLICTSVKGPKENEWMIDPTAIGDIYGPEGLDFV 255

Query: 265 VDGGVRVADPSTVVDMTITPSKILRQGKGARLPWMVAEDDGEPTVGEDI 308
           VDGG+RVA+PST+VDMT    K++R+GKG  LPWMV EDD E ++ +D+
Sbjct: 256 VDGGIRVAEPSTIVDMTGPYPKVIREGKGPILPWMVVEDD-ESSLRQDL 302

The following BLAST results are available for this feature:

BLAST of Lsi07G014780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0AFR5	3.0e-24	30.05	Uncharacterized protein YciO OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700...	[more]
P0AFR4	3.0e-24	30.05	Uncharacterized protein YciO OS=Escherichia coli (strain K12) OX=83333 GN=yciO P...	[more]
P0AFR6	3.0e-24	30.05	Uncharacterized protein YciO OS=Shigella flexneri OX=623 GN=yciO PE=3 SV=1	[more]
P45103	5.2e-24	30.88	Uncharacterized protein HI_1198 OS=Haemophilus influenzae (strain ATCC 51907 / D...	[more]
Q86U90	2.4e-13	30.36	YrdC domain-containing protein, mitochondrial OS=Homo sapiens OX=9606 GN=YRDC PE...	[more]

BLAST of Lsi07G014780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BMX4	4.2e-162	92.86	uncharacterized protein YciO isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491794 ...	[more]
A0A0A0LBV9	2.2e-158	90.91	YrdC-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585350 P...	[more]
A0A5D3C4N1	1.0e-155	81.25	YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1J9P6	2.7e-153	91.72	uncharacterized protein LOC111482522 OS=Cucurbita maxima OX=3661 GN=LOC111482522...	[more]
A0A5A7TLP4	2.4e-149	78.21	YrdC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Lsi07G014780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450106.1	8.7e-162	92.86	PREDICTED: uncharacterized protein YciO isoform X1 [Cucumis melo]	[more]
XP_038877956.1	1.5e-161	93.85	uncharacterized protein YciO [Benincasa hispida]	[more]
XP_004145661.1	4.5e-158	90.91	uncharacterized protein LOC101214648 isoform X2 [Cucumis sativus] >KGN58172.1 hy...	[more]
TYK05316.1	2.1e-155	81.25	yrdC domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_023527501.1	4.3e-153	91.36	uncharacterized protein LOC111790710 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi07G014780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01920.1	5.2e-112	67.13	DHBP synthase RibB-like alpha/beta domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006070	YrdC-like domain	TIGRFAM	TIGR00057	TIGR00057	coord: 86..287 e-value: 1.2E-41 score: 140.2
IPR006070	YrdC-like domain	PFAM	PF01300	Sua5_yciO_yrdC	coord: 93..285 e-value: 6.9E-46 score: 156.0
IPR006070	YrdC-like domain	PROSITE	PS51163	YRDC	coord: 84..287 score: 22.798807
None	No IPR available	GENE3D	3.90.870.10	DHBP synthase	coord: 73..291 e-value: 3.1E-54 score: 185.1
None	No IPR available	PIRSR	PIRSR004930-1	PIRSR004930-1	coord: 86..286 e-value: 1.6E-25 score: 87.8
None	No IPR available	PANTHER	PTHR42828	DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN	coord: 20..300
IPR017945	DHBP synthase RibB-like alpha/beta domain superfamily	SUPERFAMILY	55821	YrdC/RibB	coord: 81..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G014780.1	Lsi07G014780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003725	double-stranded RNA binding