Lsi07G013520 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G013520
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein cornichon homolog 4-like
Location	chr07: 19703088 .. 19706906 (+)
RNA-Seq Expression	Lsi07G013520
Synteny	Lsi07G013520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATCTATATGTGTGGCTTTTATCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGGTAAATTCGAAACCCTATCTCGTCTGTTTGTCTCGCATTATCTTCAGTTCGAGTTTGTGAAGTAGAATCAAAGACGGTTTATATCAAAATTTCGAACGCGGATTCATTTTACTACTATTTCTGAATATTAATTTGAAGTAAATGAGCATTTCGATGCGCGTTTTGTTCATCTCGTACGGGTTAGGGTTTAGCACAGTTATAATTCACATATTCTTCTTCGTTTTTCAATTTGGAAGCACTTTTAAAGAAACCGTAAATTTTAAACAGATTCTGAGGTCAGGGTTTTGATGGCGGTAAATTATTTGAAGTTTATTTGTCAATATCCATCCTTTGATCTCGTTTGTTATGAGCTAAGTATAATTAAAGTTAAAATTCATGGCATTTAGTCTTGAAAGATTATGGATGCAATGGATCATTATAACATGTTGACTGATTCTTAGTTTGAACTTTCTAATGTTGATCCTCAGAAAATTTATTAGTAGAGGCTCAATTTTCCAAGAGGCTGGCAATGACTAATGAGCTTGTATGGAAACATATTAAAGAATTTTAAATAACATTTTAGGACATTTTCAAATCAAGTTTTCCTTTTGTATTTATGCATATCATTTGCCTCTCTTTGAATCAACTTCTTGTTTTTTAACTTGTTTTTATTATCATCATCATCATCATCATCATTATTTTGTGTGTAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCGTAGCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCATTGATATGTGCGCCCTACATATATTATAATGTGAGACTGTAAGTATTTTCATCTCTCACCTTTGATTGAACTTATTATCAAAATCAAGAATATCTTACATGATTTGTATAATAAAACCAAAAAGACACATGATTTCGAACAGTTTTGACCATATGGGATATATGCTTCTGATTTTGAGCATTTAGAAAAACTAGAGCGCCCCATTGATTTGACACAGCATAAGAGATACTTGATGATTATCGCTAGGCTAGCTTACTGTCAGTAGATAGCATAGTTCATGTTGGTATGTGGTTGTAAACTGTGGCTGGATCATGTTGGTATGTTGTTGGGATGTGATAGGAGACTGCTATTTGGAGAACATGTCTAATTACACTTCTAATACATTTTGTCGAATTATAGATTATTAACTGTCCATGATGTGTCGTGTGTTGCATAAGGAATATGGTCAGAGCTTGCATTATTTCCATCTCAGAAAATACACGTGGTAGTCTAGAGTAGTAGCTGAACTTCCTTGGTTGAAGAACTAATTTACGATGCATTGCAGTCATCACATTCTGTATCTAAATGTATTTTTGATTCTCAAGAACTAGAATTAAGGAATGCCAGAATTTAAGTTGTTTGAAATTGGACTATGAGACTGTATGATTGAGTGATGAATGCACCATTTAAAATATTTGAGTCAGAATCTCCCTTTGGCTCAAAGTTGAGGCGCATCCTATATTAGGAAATAGTAAGCATTTTGAATATTATAATATTTTGGTGATATAAATCCCAGCTCTGGAGTTGGGTGGTCATTACGATAAGCCTTTTGAGTACTCTGAAGCCTAAACCAACTAAAGTAATGTCTACCTTCATTCATCCTTTCCCACTCCCTATATTGATAACCAACTCCTTTATTAATTACTAATATTCCCTTTCCATTCTAAATCTAATAATATTACTAACAATTACCTCATTGCATTCCTAACATTATCTCACCCTTGAAACACGCCTTCATAAGAATTTGCATATATAATAATATACTCATTAGTCTTTTTCTTGTGATCAGGTACCTACGAAGACAACACCTGATAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCAACGACTTTTCAAACTAGCCTACCTAGTTTTCCTCCTTTTCCTTTCTATATTTTGGTATTTCGAGAGATTTTTCATGTTATCGTTCTGTGTTTCCTTTTTTTTTTCTAATCTTAAATTGTTAAATGCCTCTGACTGAGTTTGCTTGATTTGTCATTACAGGATGATATATTCTGCTTTGGAAGATGATGAATGAATAGAAGCAATGGCTTGCATGCAGTTGATTGTATCTCAACGGTTGATATCATCAGTTGTGAGTTGAATTTCTATTCTTCAGTATCATTTTTTTCCTGAAGCTGCTGCACTTTGCAGATTTCAGTAACATTCTAGTTTGATCTGGGATCTTCATTTGTATTTTGGACTTTAGAGAGAGGTTTAGAAAGCAGATTTCACGTCAATACTGTTATGTTTAGGTGTTTTCATGGTTGAAATAACTATTATGAATGGTGTCTCTCTCTCACAAACACACCAGCACTCATTTTAGGCAATGGCCTTTCCCTTCGTGAGTTTGAAGTCAATTTATAATGATGTCATGGAGAAAGGCCATTGTTTCTTGTAATTCTTCTTCTAGTATTACTAAGTCAAAAATCATGTTTGACACTCGAATATTGTAGGGTCAGGCAGAGTGTTCCGTGAGATTAGTCAAAGTGTACATAAGTTGGTCAGGCAAAGTGTTCTGTGGGGTAGAAAATCATGTTTGACACACTAATATTGTAGAGTCTGGTGAGTTGTCCTATGAGATTCGTCGAGGTGCACGTAAGCTGCCCTGAGCATTCACAGATAAAAAAGAGTAGAAAATAATGTTTGAGAACATTATTTGTATTTTGTAGTCTGTTTTTTTAGACCAGAAAAAGAGACCGTTTGCTGATGAAAGTATATCTTTTCAAGTGGAATGATGCTACATCAACATCTAGTTACTATTTAATTAGATAATTAACTTTAGGGATTGAACAGTCTAGTATGGAGTTTAGTTTCCTACAACACACAAAAATGCTTCAGAGTATTTTGACTCATTTGTGTAATGTCTGTCAAAGATGGGTGGTTAAGTAGATGACATGAAAGAAGAACATGATGTGTAGAAGACACGACATTATATTTTCAACCAAAAAGGTCTACGAAGCTCTGTCATATCAGGGCATTGAATGTTTCTTTAACTTAAGTAATGTGTCATATTTATCATCGTGTTAATCGTGGGAGTTGTAACAATACATTAGGAAAGTGTACCAAGTTCGATTTTGTTTCACTTTACCATTTTTTTGCCCTACCAACAATCTTATTATTTAGTTTAAGTCGAGAAAAAATTCTCTAGTCTCATTGTTTCGCCTATGTATGTATAGTTTTCAAAATGTTGCTATAAGATAATTAGCAAAATAAATGGCATGGTAGGTAATAGTGTTTATGATCTTAATTTATAATAACAAAAGTGACAAATAGGCAAATTGTTCAAATTAAAAAATAAAAATAAATAAAAAAAATAGACATGCTTCCTAAAATGTGGTTATTTTGACCTTTTTGAGAAATGAAATGAAATTAATTATTTACATGTTTATGCCTTAATGGCGTGGCAATGTTTATATTATTAGGGAAAAAAAAAACAAAACAAAAAAAAAAGAAGATGAAGACATGTTATTCCATTACAACAAATAAAAAAGAAAAAAAAAATATAGCTCGTACCAATTATCCAACTATTATATTAAACAAATAAAAAAGGAATATAGCTCAACTGATGTGGGTACGTATTAACAATCACTTAGTTCAAATTATCCAACTATTATACTAAAAAATGAATGTGTCCCTCCA

mRNA sequence

ATGGGGGATCTATATGTGTGGCTTTTATCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGGTAAATTCGAAACCCTATCTCCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCGTAGCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCATTGATATGTGCGCCCTACATATATTATAATGTGAGACTGTACCTACGAAGACAACACCTGATAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCAACGACTTTTCAAACTAGCCTACCTAGTTTTCCTCCTTTTCCTTTCTATATTTTGGTATTTCGAGAGATTTTTCATGATGATATATTCTGCTTTGGAAGATGATGAATGAATAGAAGCAATGGCTTGCATGCAGTTGATTGTATCTCAACGGTTGATATCATCAGTTGTGAGTTGAATTTCTATTCTTCAGTATCATTTTTTTCCTGAAGCTGCTGCACTTTGCAGATTTCAGTAACATTCTAGTTTGATCTGGGATCTTCATTTGTATTTTGGACTTTAGAGAGAGGTTTAGAAAGCAGATTTCACGTCAATACTGTTATGTTTAGGTGTTTTCATGGTTGAAATAACTATTATGAATGGTGTCTCTCTCTCACAAACACACCAGCACTCATTTTAGGCAATGGCCTTTCCCTTCGTGAGTTTGAAGTCAATTTATAATGATGTCATGGAGAAAGGCCATTGTTTCTTGTAATTCTTCTTCTAGTATTACTAAGTCAAAAATCATGTTTGACACTCGAATATTGTAGGGTCAGGCAGAGTGTTCCGTGAGATTAGTCAAAGTGTACATAAGTTGGTCAGGCAAAGTGTTCTGTGGGGTAGAAAATCATGTTTGACACACTAATATTGTAGAGTCTGGTGAGTTGTCCTATGAGATTCGTCGAGGTGCACGTAAGCTGCCCTGAGCATTCACAGATAAAAAAGAGTAGAAAATAATGTTTGAGAACATTATTTGTATTTTGTAGTCTGTTTTTTTAGACCAGAAAAAGAGACCGTTTGCTGATGAAAGTATATCTTTTCAAGTGGAATGATGCTACATCAACATCTAGTTACTATTTAATTAGATAATTAACTTTAGGGATTGAACAGTCTAGTATGGAGTTTAGTTTCCTACAACACACAAAAATGCTTCAGAGTATTTTGACTCATTTGTGTAATGTCTGTCAAAGATGGGTGGTTAAGTAGATGACATGAAAGAAGAACATGATGTGTAGAAGACACGACATTATATTTTCAACCAAAAAGGTCTACGAAGCTCTGTCATATCAGGGCATTGAATGTTTCTTTAACTTAAGTAATGTGTCATATTTATCATCGTGTTAATCGTGGGAGTTGTAACAATACATTAGGAAAGTGTACCAAGTTCGATTTTGTTTCACTTTACCATTTTTTTGCCCTACCAACAATCTTATTATTTAGTTTAAGTCGAGAAAAAATTCTCTAGTCTCATTGTTTCGCCTATGTATGTATAGTTTTCAAAATGTTGCTATAAGATAATTAGCAAAATAAATGGCATGGTAGGTAATAGTGTTTATGATCTTAATTTATAATAACAAAAGTGACAAATAGGCAAATTGTTCAAATTAAAAAATAAAAATAAATAAAAAAAATAGACATGCTTCCTAAAATGTGGTTATTTTGACCTTTTTGAGAAATGAAATGAAATTAATTATTTACATGTTTATGCCTTAATGGCGTGGCAATGTTTATATTATTAGGGAAAAAAAAAACAAAACAAAAAAAAAAGAAGATGAAGACATGTTATTCCATTACAACAAATAAAAAAGAAAAAAAAAATATAGCTCGTACCAATTATCCAACTATTATATTAAACAAATAAAAAAGGAATATAGCTCAACTGATGTGGGTACGTATTAACAATCACTTAGTTCAAATTATCCAACTATTATACTAAAAAATGAATGTGTCCCTCCA

Coding sequence (CDS)

ATGGGGGATCTATATGTGTGGCTTTTATCATTCTTCTTCCTCATTGCTCTTCTTATTGTCCTTGTTTATCAGGTAAATTCGAAACCCTATCTCCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTAGAATAAATAAAGTGATTATGCCGGAGTTCGTAGCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACAGGGCATTGGGGTATGTCATTGATATGTGCGCCCTACATATATTATAATGTGAGACTGTACCTACGAAGACAACACCTGATAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCAACGACTTTTCAAACTAGCCTACCTAGTTTTCCTCCTTTTCCTTTCTATATTTTGGTATTTCGAGAGATTTTTCATGATGATATATTCTGCTTTGGAAGATGATGAATGA

Protein sequence

MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLLFLSIFWYFERFFMMIYSALEDDE

Homology

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BLAST of Lsi07G013520 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-51
Identity = 102/150 (68.00%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGD++ WL+SFFFLIAL+ ++VYQ       L+CLADLEFDYINPYDSASRIN V++PEF
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQ-------LVCLADLEFDYINPYDSASRINSVVLPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           +  GVLC+FYLLTGHW M+L+C PY+YYN  LY +RQHL+DVTEIFN+LNWEKK+RLFKL
Sbjct: 61  IVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AY+V  LFL+IFW       MIYSAL+D E
Sbjct: 121 AYIVLNLFLTIFW-------MIYSALDDYE 136

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BLAST of Lsi07G013520 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 9.8e-45
Identity = 86/119 (72.27%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 32  LMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSLICAPYIYYNVR 91
           L+CLADLEFDYINPYDSASRIN V++PEF+  GVLC+FYLLTGHW M+L+C PY+YYN  
Sbjct: 17  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query: 92  LYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           LY +RQHL+DVTEIFN+LNWEKK+RLFKLAY+V  LFL+IFW       MIYSAL+D E
Sbjct: 77  LYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW-------MIYSALDDYE 128

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BLAST of Lsi07G013520 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-44
Identity = 91/150 (60.67%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MG+++ W++SF  LI LL ++VYQ       L+ LADLEFDYINPYDSASRIN V++PE 
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQ-------LISLADLEFDYINPYDSASRINFVVLPES 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           +  G LC+FYL+TGHW M+L+C PY+YYN  LY R+QHLIDVTEIFN+L+WEKK+RLFKL
Sbjct: 61  ILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AY++  LFL+IFW       +IYS L+D E
Sbjct: 121 AYIILTLFLTIFW-------LIYSTLDDYE 136

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BLAST of Lsi07G013520 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-36
Identity = 71/148 (47.97%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDL  W++SF FL  L+I+++YQ       L CLADLEFD INPYD +SRIN++++PEF
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQ-------LTCLADLEFDRINPYDVSSRINRMVLPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
              G+LCL+Y+LTGHW M+++  P+++YN+RLY++R+HL DVTE++N   WE+K+R++K+
Sbjct: 61  GLQGLLCLYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKI 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALED 149
            ++   +F++ +W       +I+SAL D
Sbjct: 121 GHIALSIFITTYW-------LIHSALGD 134

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BLAST of Lsi07G013520 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.0e-26
Identity = 63/148 (42.57%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 3   DLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEFVA 62
           DL++W++SFF  +AL+  + YQV       +CL DLE DY+NP+++++RIN++++PEF+ 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQV-------ICLTDLEADYLNPFETSTRINRLVIPEFIL 63

Query: 63  MGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAY 122
            G LCL +LLT HW   L+  P   Y+  LY  R++LIDVTE+F  +++EKK R  KL +
Sbjct: 64  QGSLCLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGF 123

Query: 123 LVFLLFLSIFWYFERFFMMIYSALEDDE 151
            VFL  + +   F      +YS  EDD+
Sbjct: 124 YVFLFIMVV---FRLTLSAVYSFTEDDD 141

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BLAST of Lsi07G013520 vs. ExPASy TrEMBL
Match: A0A6J1KXU1 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 125/150 (83.33%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDLYVWL+SFFFLIALLIVL+YQ       LMCLADLEFDYINPYDSASRINKVI PEF
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQ-------LMCLADLEFDYINPYDSASRINKVIFPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           ++MGVLCLFYLLTGHWGMS++C PYIYYNVR+YLRRQHLIDVTEIFNMLNWEKKQRLFKL
Sbjct: 61  ISMGVLCLFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLS+FW       MIY ALEDDE
Sbjct: 121 AYLVFLLFLSVFW-------MIYYALEDDE 136

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BLAST of Lsi07G013520 vs. ExPASy TrEMBL
Match: A0A6J1FRW5 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.9e-60
Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDLYVWL+SFFFLIALLIVL+YQ       LMCLADLEFDYINPYDSAS+INKVI PEF
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQ-------LMCLADLEFDYINPYDSASQINKVIFPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           ++MGVLCLFYLLTGHWGMS++C PYIYYNVR+YLRRQHLIDVTEIFNMLNWEKKQRLFKL
Sbjct: 61  ISMGVLCLFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLS+FW       MIY ALEDDE
Sbjct: 121 AYLVFLLFLSVFW-------MIYYALEDDE 136

[Close]

BLAST of Lsi07G013520 vs. ExPASy TrEMBL
Match: A0A1S3BLR3 (protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.5e-60
Identity = 127/150 (84.67%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           M DLYVWL+SFFFLIALLIVLVYQ       LMCLADLEFDYINPYDSASRINKVIMPEF
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQ-------LMCLADLEFDYINPYDSASRINKVIMPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           VAMGVLCLFYLLTGHWGMS++C PYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKKQRLFKL
Sbjct: 61  VAMGVLCLFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLV LLFLSIFW       MIY ALEDDE
Sbjct: 121 AYLVVLLFLSIFW-------MIYHALEDDE 136

[Close]

BLAST of Lsi07G013520 vs. ExPASy TrEMBL
Match: A0A6J1E6H8 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 124/150 (82.67%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDL+VWL+SFF L+ALLIVLVYQ       LMCLADLEFDYINPYDSASRINKV+MPEF
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQ-------LMCLADLEFDYINPYDSASRINKVVMPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           VA+GVLCLFYLLTGHWGMS++C PYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKK+RLFKL
Sbjct: 61  VAIGVLCLFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLSIFW       MIYSALEDDE
Sbjct: 121 AYLVFLLFLSIFW-------MIYSALEDDE 136

[Close]

BLAST of Lsi07G013520 vs. ExPASy TrEMBL
Match: A0A6J1HL36 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 123/150 (82.00%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDL+VWL+SFF L+ALLIVLVYQ       LMCLADLEFDYINPYDSASRINKV+MPEF
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQ-------LMCLADLEFDYINPYDSASRINKVVMPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           +A+GVLCLFYLLTGHWGMS++C PYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKK+RLFKL
Sbjct: 61  IAIGVLCLFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLSIFW       MIYSALEDDE
Sbjct: 121 AYLVFLLFLSIFW-------MIYSALEDDE 136

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BLAST of Lsi07G013520 vs. NCBI nr
Match: XP_038876883.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 130/150 (86.67%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDLYVWL+SFFFLIALLIVLVYQ       LMCLADLEFDYINPYDSASRINKVI+PEF
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLVYQ-------LMCLADLEFDYINPYDSASRINKVILPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           V++GVLCLFYLLTGHWGMS+IC PYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL
Sbjct: 61  VSVGVLCLFYLLTGHWGMSMICGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLSIFW       MIYSALEDDE
Sbjct: 121 AYLVFLLFLSIFW-------MIYSALEDDE 136

[Close]

BLAST of Lsi07G013520 vs. NCBI nr
Match: XP_023005595.1 (protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.7 bits (618), Expect = 2.1e-60
Identity = 125/150 (83.33%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDLYVWL+SFFFLIALLIVL+YQ       LMCLADLEFDYINPYDSASRINKVI PEF
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQ-------LMCLADLEFDYINPYDSASRINKVIFPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           ++MGVLCLFYLLTGHWGMS++C PYIYYNVR+YLRRQHLIDVTEIFNMLNWEKKQRLFKL
Sbjct: 61  ISMGVLCLFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLS+FW       MIY ALEDDE
Sbjct: 121 AYLVFLLFLSVFW-------MIYYALEDDE 136

[Close]

BLAST of Lsi07G013520 vs. NCBI nr
Match: XP_023539252.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60
Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDLYVWL+SFFFLIALLIVL+YQ       LMCLADLEFDYINPYDSASRINKVI PEF
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQ-------LMCLADLEFDYINPYDSASRINKVIFPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           ++MGVLCLFYLLTGHWGMS++C PYIYYNVR+YLRRQHL+DVTEIFNMLNWEKKQRLFKL
Sbjct: 61  ISMGVLCLFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLVDVTEIFNMLNWEKKQRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLS+FW       MIY ALEDDE
Sbjct: 121 AYLVFLLFLSVFW-------MIYYALEDDE 136

[Close]

BLAST of Lsi07G013520 vs. NCBI nr
Match: XP_022943501.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 6.1e-60
Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDLYVWL+SFFFLIALLIVL+YQ       LMCLADLEFDYINPYDSAS+INKVI PEF
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQ-------LMCLADLEFDYINPYDSASQINKVIFPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           ++MGVLCLFYLLTGHWGMS++C PYIYYNVR+YLRRQHLIDVTEIFNMLNWEKKQRLFKL
Sbjct: 61  ISMGVLCLFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLS+FW       MIY ALEDDE
Sbjct: 121 AYLVFLLFLSVFW-------MIYYALEDDE 136

[Close]

BLAST of Lsi07G013520 vs. NCBI nr
Match: XP_023553496.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023553497.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023553498.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 1.0e-59
Identity = 124/150 (82.67%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDL+VWL+SFF L+ALLIVLVYQ       LMCLADLEFDYINPYDSASRINKV+MPEF
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQ-------LMCLADLEFDYINPYDSASRINKVVMPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           +AMGVLCLFYLLTGHWGMS++C PYIYYNVRLYLRRQ+L+DVTEIFNMLNWEKK+RLFKL
Sbjct: 61  IAMGVLCLFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AYLVFLLFLSIFW       MIYSALEDDE
Sbjct: 121 AYLVFLLFLSIFW-------MIYSALEDDE 136

[Close]

BLAST of Lsi07G013520 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.0e-52
Identity = 102/150 (68.00%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGD++ WL+SFFFLIAL+ ++VYQ       L+CLADLEFDYINPYDSASRIN V++PEF
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQ-------LVCLADLEFDYINPYDSASRINSVVLPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           +  GVLC+FYLLTGHW M+L+C PY+YYN  LY +RQHL+DVTEIFN+LNWEKK+RLFKL
Sbjct: 61  IVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AY+V  LFL+IFW       MIYSAL+D E
Sbjct: 121 AYIVLNLFLTIFW-------MIYSALDDYE 136

[Close]

BLAST of Lsi07G013520 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 181.0 bits (458), Expect = 6.9e-46
Identity = 86/119 (72.27%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 32  LMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLCLFYLLTGHWGMSLICAPYIYYNVR 91
           L+CLADLEFDYINPYDSASRIN V++PEF+  GVLC+FYLLTGHW M+L+C PY+YYN  
Sbjct: 17  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query: 92  LYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           LY +RQHL+DVTEIFN+LNWEKK+RLFKLAY+V  LFL+IFW       MIYSAL+D E
Sbjct: 77  LYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW-------MIYSALDDYE 128

[Close]

BLAST of Lsi07G013520 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 91/150 (60.67%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MG+++ W++SF  LI LL ++VYQ       L+ LADLEFDYINPYDSASRIN V++PE 
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQ-------LISLADLEFDYINPYDSASRINFVVLPES 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
           +  G LC+FYL+TGHW M+L+C PY+YYN  LY R+QHLIDVTEIFN+L+WEKK+RLFKL
Sbjct: 61  ILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKL 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALEDDE 151
           AY++  LFL+IFW       +IYS L+D E
Sbjct: 121 AYIILTLFLTIFW-------LIYSTLDDYE 136

[Close]

BLAST of Lsi07G013520 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 151.8 bits (382), Expect = 4.5e-37
Identity = 71/148 (47.97%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 1   MGDLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEF 60
           MGDL  W++SF FL  L+I+++YQ       L CLADLEFD INPYD +SRIN++++PEF
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQ-------LTCLADLEFDRINPYDVSSRINRMVLPEF 60

Query: 61  VAMGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKL 120
              G+LCL+Y+LTGHW M+++  P+++YN+RLY++R+HL DVTE++N   WE+K+R++K+
Sbjct: 61  GLQGLLCLYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKI 120

Query: 121 AYLVFLLFLSIFWYFERFFMMIYSALED 149
            ++   +F++ +W       +I+SAL D
Sbjct: 121 GHIALSIFITTYW-------LIHSALGD 134

[Close]

BLAST of Lsi07G013520 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 118.6 bits (296), Expect = 4.2e-27
Identity = 63/148 (42.57%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 3   DLYVWLLSFFFLIALLIVLVYQVNSKPYLLMCLADLEFDYINPYDSASRINKVIMPEFVA 62
           DL++W++SFF  +AL+  + YQV       +CL DLE DY+NP+++++RIN++++PEF+ 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQV-------ICLTDLEADYLNPFETSTRINRLVIPEFIL 63

Query: 63  MGVLCLFYLLTGHWGMSLICAPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAY 122
            G LCL +LLT HW   L+  P   Y+  LY  R++LIDVTE+F  +++EKK R  KL +
Sbjct: 64  QGSLCLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGF 123

Query: 123 LVFLLFLSIFWYFERFFMMIYSALEDDE 151
            VFL  + +   F      +YS  EDD+
Sbjct: 124 YVFLFIMVV---FRLTLSAVYSFTEDDD 141

The following BLAST results are available for this feature:

BLAST of Lsi07G013520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	1.4e-51	68.00	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q3EDD7	9.8e-45	72.27	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q8GWT5	1.7e-44	60.67	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q9SZ74	6.3e-36	47.97	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	6.0e-26	42.57	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Lsi07G013520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXU1	1.0e-60	83.33	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=...	[more]
A0A6J1FRW5	2.9e-60	82.67	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 P...	[more]
A0A1S3BLR3	8.5e-60	84.67	protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 P...	[more]
A0A6J1E6H8	1.1e-59	82.67	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 P...	[more]
A0A6J1HL36	1.5e-59	82.00	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465137 PE=...	[more]

BLAST of Lsi07G013520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876883.1	1.1e-61	86.67	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_023005595.1	2.1e-60	83.33	protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornic...	[more]
XP_023539252.1	2.7e-60	82.67	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943501.1	6.1e-60	82.67	protein cornichon homolog 4-like [Cucurbita moschata]	[more]
XP_023553496.1	1.0e-59	82.67	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023553497.1 pr...	[more]

BLAST of Lsi07G013520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	1.0e-52	68.00	Cornichon family protein	[more]
AT1G12340.1	6.9e-46	72.27	Cornichon family protein	[more]
AT1G62880.1	1.2e-45	60.67	Cornichon family protein	[more]
AT4G12090.1	4.5e-37	47.97	Cornichon family protein	[more]
AT3G12180.1	4.2e-27	42.57	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..132 e-value: 5.5E-54 score: 195.3
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 6..132 e-value: 9.6E-37 score: 126.0
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..149
None	No IPR available	PANTHER	PTHR12290:SF39	PROTEIN CORNICHON HOMOLOG 4-LIKE	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G013520.1	Lsi07G013520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane