Lsi07G012570 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi07G012570
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionKelch repeat-containing protein
Locationchr07: 18372028 .. 18373053 (+)
RNA-Seq ExpressionLsi07G012570
SyntenyLsi07G012570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAGATATGATGATGGCGATCCCATCGTTTCCGGCTCGCCGGAAAATGTCTTCCGTCGCTGCCCCTTTACCGGTGAAGACCACTCTGACTCTGATTCATCGGATTCCGAAGCGTTCCATGTGGAGTCCACTGGCATTTTCATGCTATCCCTGCCTGATAGCATGGAAGAGAAAGATGATAGTCTCCCTCATTCATACCAAACCGCACCGGAAGAATTGGCGCCGACCTGCTCCGATGGACGGCAGTCTGTAGCGGCGGACGCCATTGGTGCAGAGGTGAGCGTTGAATATGTTGACGATGGGAAGGCTGTTGATTTAGGGAGGGATACGGATGTAGGGTTGTACTCTGAAGTTCAGTCGACAACGGAAACAGTGGAGAAGGATAAACCGATCGAAGTTATTGGTGTTTGTAGAAGCCATAGTTTTGAAGCGAAGAAATCTGGACTTCCGTTTGAAGAATCGGAGGTCTCATTGGGTGAATCCTCATCGAAAAAGTTGAGGTTATCCGAGAAAGCTTTGGGTTTGAGCTTTTGTGCAAGAACTTTTGTAGATAAATTTCCGGTTGATTCAACAAGTTCCGGTGAAGTATCAAAAGTTAGTTCTGTAGATCATAACAACGAAGACTCCAGTGAAAAATGTCAGTTGAAAGGAACGGAAGATGGCAAGGTTTCCAATGGTGAGAATGGCGAAAATCAATACATTTACAAAGAGAAATCTGCAGAGAAGGAAGTGAAGGAGAATATGAAGAACACTCAATCTCATCAGCAGAGCAAATCTTCTTCTAGGGTGCTTCCACCTTCAATTAGTGGAGTGAAGAAAAATGCAGCTGAGGAGAGGTCTGCTACCTCTGAAGATCATCCTATAGAGGTCACTCTTTTGAAAATCCTAAAGATTCTCAAAGGAGAACAAGACAATGAAAGCGAATTCGACGACGAGACTTTGTCGAAGCTCAGCATTTTGGACATCGTCCAGCGCCGTGGAATGACATTTCCCCGGCCGGAGTGGTGGCCGCCGGAGTATTGA

mRNA sequence

ATGAATAGATATGATGATGGCGATCCCATCGTTTCCGGCTCGCCGGAAAATGTCTTCCGTCGCTGCCCCTTTACCGGTGAAGACCACTCTGACTCTGATTCATCGGATTCCGAAGCGTTCCATGTGGAGTCCACTGGCATTTTCATGCTATCCCTGCCTGATAGCATGGAAGAGAAAGATGATAGTCTCCCTCATTCATACCAAACCGCACCGGAAGAATTGGCGCCGACCTGCTCCGATGGACGGCAGTCTGTAGCGGCGGACGCCATTGGTGCAGAGGTGAGCGTTGAATATGTTGACGATGGGAAGGCTGTTGATTTAGGGAGGGATACGGATGTAGGGTTGTACTCTGAAGTTCAGTCGACAACGGAAACAGTGGAGAAGGATAAACCGATCGAAGTTATTGGTGTTTGTAGAAGCCATAGTTTTGAAGCGAAGAAATCTGGACTTCCGTTTGAAGAATCGGAGGTCTCATTGGGTGAATCCTCATCGAAAAAGTTGAGGTTATCCGAGAAAGCTTTGGGTTTGAGCTTTTGTGCAAGAACTTTTGTAGATAAATTTCCGGTTGATTCAACAAGTTCCGGTGAAGTATCAAAAGTTAGTTCTGTAGATCATAACAACGAAGACTCCAGTGAAAAATGTCAGTTGAAAGGAACGGAAGATGGCAAGGTTTCCAATGGTGAGAATGGCGAAAATCAATACATTTACAAAGAGAAATCTGCAGAGAAGGAAGTGAAGGAGAATATGAAGAACACTCAATCTCATCAGCAGAGCAAATCTTCTTCTAGGGTGCTTCCACCTTCAATTAGTGGAGTGAAGAAAAATGCAGCTGAGGAGAGGTCTGCTACCTCTGAAGATCATCCTATAGAGGTCACTCTTTTGAAAATCCTAAAGATTCTCAAAGGAGAACAAGACAATGAAAGCGAATTCGACGACGAGACTTTGTCGAAGCTCAGCATTTTGGACATCGTCCAGCGCCGTGGAATGACATTTCCCCGGCCGGAGTGGTGGCCGCCGGAGTATTGA

Coding sequence (CDS)

ATGAATAGATATGATGATGGCGATCCCATCGTTTCCGGCTCGCCGGAAAATGTCTTCCGTCGCTGCCCCTTTACCGGTGAAGACCACTCTGACTCTGATTCATCGGATTCCGAAGCGTTCCATGTGGAGTCCACTGGCATTTTCATGCTATCCCTGCCTGATAGCATGGAAGAGAAAGATGATAGTCTCCCTCATTCATACCAAACCGCACCGGAAGAATTGGCGCCGACCTGCTCCGATGGACGGCAGTCTGTAGCGGCGGACGCCATTGGTGCAGAGGTGAGCGTTGAATATGTTGACGATGGGAAGGCTGTTGATTTAGGGAGGGATACGGATGTAGGGTTGTACTCTGAAGTTCAGTCGACAACGGAAACAGTGGAGAAGGATAAACCGATCGAAGTTATTGGTGTTTGTAGAAGCCATAGTTTTGAAGCGAAGAAATCTGGACTTCCGTTTGAAGAATCGGAGGTCTCATTGGGTGAATCCTCATCGAAAAAGTTGAGGTTATCCGAGAAAGCTTTGGGTTTGAGCTTTTGTGCAAGAACTTTTGTAGATAAATTTCCGGTTGATTCAACAAGTTCCGGTGAAGTATCAAAAGTTAGTTCTGTAGATCATAACAACGAAGACTCCAGTGAAAAATGTCAGTTGAAAGGAACGGAAGATGGCAAGGTTTCCAATGGTGAGAATGGCGAAAATCAATACATTTACAAAGAGAAATCTGCAGAGAAGGAAGTGAAGGAGAATATGAAGAACACTCAATCTCATCAGCAGAGCAAATCTTCTTCTAGGGTGCTTCCACCTTCAATTAGTGGAGTGAAGAAAAATGCAGCTGAGGAGAGGTCTGCTACCTCTGAAGATCATCCTATAGAGGTCACTCTTTTGAAAATCCTAAAGATTCTCAAAGGAGAACAAGACAATGAAAGCGAATTCGACGACGAGACTTTGTCGAAGCTCAGCATTTTGGACATCGTCCAGCGCCGTGGAATGACATTTCCCCGGCCGGAGTGGTGGCCGCCGGAGTATTGA

Protein sequence

MNRYDDGDPIVSGSPENVFRRCPFTGEDHSDSDSSDSEAFHVESTGIFMLSLPDSMEEKDDSLPHSYQTAPEELAPTCSDGRQSVAADAIGAEVSVEYVDDGKAVDLGRDTDVGLYSEVQSTTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLSFCARTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVSNGENGENQYIYKEKSAEKEVKENMKNTQSHQQSKSSSRVLPPSISGVKKNAAEERSATSEDHPIEVTLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPEY
Homology
BLAST of Lsi07G012570 vs. ExPASy TrEMBL
Match: A0A5A7TCP7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00750 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.1e-130
Identity = 265/351 (75.50%), Postives = 287/351 (81.77%), Query Frame = 0

Query: 1   MNRYDDGDPIVSGSPENVFRRCPFTGEDHSDSDSSDSEAFHVESTGIFMLSLPDSMEEKD 60
           M+ + DGD IV+G P NVFRRCPFTG  +SDSDSSDSEA  VESTGIFMLSLPDSMEEKD
Sbjct: 1   MDGHADGDRIVTGLPVNVFRRCPFTGNIYSDSDSSDSEAVPVESTGIFMLSLPDSMEEKD 60

Query: 61  DSLPHSYQTAPEELAPTCSDGRQSVAADAIGAEVSVEYVDDGKAVDLGRDTDVGLYSEVQ 120
           DSLPHS+QTAPEELAPT SDGR+S+AAD+ G EVS EYVDDGKAVDLGRDTDVGLYSEVQ
Sbjct: 61  DSLPHSFQTAPEELAPTGSDGRRSLAADSTGVEVSFEYVDDGKAVDLGRDTDVGLYSEVQ 120

Query: 121 STTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLSFCA 180
           STTETVEK K IEVIG   SHS E KKSG+ FEES VSLGESSSKKLRLSE+ALGLS C 
Sbjct: 121 STTETVEKGKTIEVIGARGSHSSETKKSGILFEESVVSLGESSSKKLRLSEEALGLSSCG 180

Query: 181 RTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVSNGENGENQYIYKEKS 240
           RTF+DKFPVD T+SG         HN++D S K +LKGT+DGKVSN EN ENQ  YKEKS
Sbjct: 181 RTFLDKFPVDLTNSGG-------SHNDDDCSGKYKLKGTDDGKVSNDENDENQCNYKEKS 240

Query: 241 AEKEVKENMKNTQSHQQSK----------SSSRVLPPSISGVKKNAAEERSATSEDHPIE 300
           AEKEVKE++KN QS QQ+K          S  RVLPPS++GVKKNAAEER  TSED PIE
Sbjct: 241 AEKEVKESVKNIQSPQQNKFQEEIANAHQSCCRVLPPSMTGVKKNAAEERFNTSEDQPIE 300

Query: 301 VTLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPEY 342
           VTLLKIL ILKGEQ N  EFDDETLSKLSIL+I Q RGMTFPRPEWWPPEY
Sbjct: 301 VTLLKILMILKGEQVNVIEFDDETLSKLSILEIAQLRGMTFPRPEWWPPEY 344

BLAST of Lsi07G012570 vs. ExPASy TrEMBL
Match: A0A0A0L1F4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017190 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 4.3e-123
Identity = 254/351 (72.36%), Postives = 273/351 (77.78%), Query Frame = 0

Query: 1   MNRYDDGDPIVSGSPENVFRRCPFTGEDHSDSDSSDSEAFHVESTGIFMLSLPDSMEEKD 60
           MN +DDGD IV+GSP NV RRCPFTG  +SDSDSSDSEAF VESTGIFMLSLPDSMEEKD
Sbjct: 1   MNAHDDGDHIVTGSPVNVLRRCPFTGNVYSDSDSSDSEAFPVESTGIFMLSLPDSMEEKD 60

Query: 61  DSLPHSYQTAPEELAPTCSDGRQSVAADAIGAEVSVEYVDDGKAVDLGRDTDVGLYSEVQ 120
           DSLPHS+QTAPEELAP  SD R+S+AAD+ G EVS EYVDDGKAVDLGRDTDVGLYSEVQ
Sbjct: 61  DSLPHSFQTAPEELAPNGSDERRSLAADSTGVEVSFEYVDDGKAVDLGRDTDVGLYSEVQ 120

Query: 121 STTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLSFCA 180
           STTETVEK K I VIGVC SHS E KKSG+ FEES VSLGESSSKKLRLS +ALGLS   
Sbjct: 121 STTETVEKGKSIGVIGVCGSHSSEPKKSGILFEESVVSLGESSSKKLRLSVEALGLS--- 180

Query: 181 RTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVSNGENGENQYIYKEKS 240
                               S   HN++D S K +LKGT+DGK+SN EN ENQ  YKEKS
Sbjct: 181 --------------------SGGSHNDDDCSGKYKLKGTDDGKISNDENDENQCNYKEKS 240

Query: 241 AEKEVKENMKNTQSHQQSK----------SSSRVLPPSISGVKKNAAEERSATSEDHPIE 300
           AE EVKE++KN +SHQQ+K          S  RVLPPSISGVK NAAEERS TSED PIE
Sbjct: 241 AENEVKESVKNIESHQQNKFQEEIANAHQSCCRVLPPSISGVKNNAAEERSNTSEDQPIE 300

Query: 301 VTLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPEY 342
           VTLLKIL ILKG QDN  EFDDETLSKLSIL+I Q RGMTFPRPEWWPPEY
Sbjct: 301 VTLLKILMILKGGQDNTIEFDDETLSKLSILEIAQLRGMTFPRPEWWPPEY 328

BLAST of Lsi07G012570 vs. ExPASy TrEMBL
Match: A0A2N9G3N6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21927 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-23
Identity = 119/351 (33.90%), Postives = 174/351 (49.57%), Query Frame = 0

Query: 11  VSGSPENVFRRCPFTGED-----HSDSDSSD---SEAFHVESTGIFMLSLPDSMEEKDDS 70
           VS S E   R C F  E      H D DSSD   S    V STGI M+S P+S EEKDDS
Sbjct: 19  VSASQEERLRHCSFALESDGCSGHDDGDSSDPTQSMEVDVASTGIVMVSPPESSEEKDDS 78

Query: 71  LPHSYQTAPEE--LAPTCSDGRQSVAADA---IGAEVSVEYVDDGKAVDLGRDTDVGLYS 130
            PH     P E  L  +  + +Q +A D      AE      D  +AVDLG+D+D+G +S
Sbjct: 79  NPHDVFQTPTEGSLLASSEEQQQPMAVDGPRHSDAEALAGCTDGSEAVDLGKDSDLG-FS 138

Query: 131 EVQSTTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEV--SLGESSSKKLRLSEKALG 190
           EV+      ++D       VC     E++K GL   ES +  SL ES SKKL++ +  L 
Sbjct: 139 EVELAQRVYDED------SVC-----ESEKLGLSRRESSLKESLAESPSKKLKILDPNLA 198

Query: 191 LSF---CARTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVSNG-ENGE 250
                 C     D  P +   + E+ + S V+ N+E+     ++ G    K       G+
Sbjct: 199 SEAPEPCTGALSDSDP-EIHQNTEIIEDSEVEANDEE----IKVCGESSAKRKLAFPYGD 258

Query: 251 NQYIYKEKSAEKEVKENMKNTQSHQQSKSSS--RVLPPSISGVKKNAAEERSATSEDHPI 310
            + +  E  +E++ +E  +   +H+++ +S   RVLP S+    +N AE        +  
Sbjct: 259 TEIVQSE--SEEDWEETEEGEVNHEKANASKIYRVLPVSMHVPAENRAERVDNNGGLNGK 318

Query: 311 EVTLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPE 341
           EVT+L +LK LK   D E    D++L  +SI D+ +++GMTFP+P WWP E
Sbjct: 319 EVTILDVLKFLKDGCDEE----DDSLKSVSIFDMCKQQGMTFPQPCWWPEE 346

BLAST of Lsi07G012570 vs. ExPASy TrEMBL
Match: A0A5D3BIQ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002010 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.9e-16
Identity = 97/350 (27.71%), Postives = 164/350 (46.86%), Query Frame = 0

Query: 10  IVSGSPENVFRRCPFTGEDHS--DSDSSDSEAFHVESTGIFMLSLPDSMEEKDDSL-PHS 69
           ++S S E++ R   F G   S   S    S+      T +   S P+S+E+++  + P +
Sbjct: 17  VISHSQEDILRHSSFAGAPKSLDASGFPASQFLQRHPTCVSTASPPESLEQREQLITPDA 76

Query: 70  YQTAPEELAPTCSDGRQSVAADAIGAEVSVEYVDDG------KAVDLGRDTDVGLYSEVQ 129
           Y+  PE+     S GR+ VA D    + +   V  G        VDLG++ ++G + EVQ
Sbjct: 77  YRPPPEQ-----SGGRRPVAVDDPSVQDAAAAVGGGCVSNVPTGVDLGKNDELG-FLEVQ 136

Query: 130 STTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLSFCA 189
           ST +T E    IE+IGV RS   E+   G           ES+SK+L+LS +ALG     
Sbjct: 137 STQQTDE----IEIIGVRRSKVSESGTDG---------EAESASKRLKLSNEALGKD--- 196

Query: 190 RTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVSNGENGENQYIYKEKS 249
                  P+    SG  S +           EK    G E GK+ +G+    +  +  K+
Sbjct: 197 ----SSVPLVGLESGRESIL----------IEKSVPVGEESGKIDDGKVSNGEETHCNKN 256

Query: 250 AEKEVKENMKNTQSHQQSKSSS--------RVLPPSISG-VKKNAAEERSATSEDHPIEV 309
            EK  ++ ++N+   +  +             L  +++G + K   ++ S++ E      
Sbjct: 257 KEKLTEKKVENSHPEEPGEYDGVLNCDPWRETLTSTLNGLISKEKDDDASSSGESGRGNS 316

Query: 310 TLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPEY 342
            +++ILKI+   + ++   +DE L+ + ++++   RGMTFPRP WWP EY
Sbjct: 317 IIMEILKIVSQVERSD---EDEKLANMDLVEVAMSRGMTFPRPCWWPEEY 327

BLAST of Lsi07G012570 vs. ExPASy TrEMBL
Match: A0A0A0LT00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042410 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.9e-16
Identity = 102/345 (29.57%), Postives = 159/345 (46.09%), Query Frame = 0

Query: 10  IVSGSPENVFRRCPFTGEDHS--DSDSSDSEAFHVESTGIFMLSLPDSMEEKDDSL-PHS 69
           ++S S E++ R C F G  +S   S    S+  H   T +   S P+S+E+++  + P +
Sbjct: 17  LISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTASPPESLEQREQLISPDA 76

Query: 70  YQTAPEELAPTCSDGRQSVAADAIGAEVSVEYVDDG------KAVDLGRDTDVGLYSEVQ 129
            Q  PE+     S GR+ V  D    + +   V  G        VDLG++ ++G + EVQ
Sbjct: 77  CQPPPEQ-----SGGRRPVVVDDPSVQDAAAAVGGGCVSNVPTGVDLGKNDELG-FLEVQ 136

Query: 130 STTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLSFCA 189
           ST +T      IE+IGV RS   E+   G           ES+SK+L+LS +ALG    +
Sbjct: 137 STRQT----DGIEIIGVRRSKVSESGTDG---------EAESASKRLKLSNEALGKD-SS 196

Query: 190 RTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVSNGEN---GENQYIYK 249
             FV      S   GE S    +D                DGKVSNGE     +N+    
Sbjct: 197 VPFVGLLIEKSVPVGEES--GKID----------------DGKVSNGEETHCNKNKQNLT 256

Query: 250 EKSAEKEVKENMKNTQSHQQSKSSSRVLPPSISG-VKKNAAEERSATSEDHPIEVTLLKI 309
           EK  E    E            +    L   ++G + K   ++ +++ E       +++I
Sbjct: 257 EKKVENSQPEVPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGSGNSIIMEI 316

Query: 310 LKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPEY 342
           LKIL   + ++   +DE L+ ++++++   RGMTFPRP WWP EY
Sbjct: 317 LKILSQVERSD---EDEKLADMNLIEVAMSRGMTFPRPCWWPEEY 320

BLAST of Lsi07G012570 vs. NCBI nr
Match: KAG6577658.1 (hypothetical protein SDJN03_25232, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 498.8 bits (1283), Expect = 3.7e-137
Identity = 273/359 (76.04%), Postives = 302/359 (84.12%), Query Frame = 0

Query: 1   MNRYDDGDPIVSGSPENVFRRCPFT-----GEDHSDSDSSDSEAFHVESTGIFMLSLPDS 60
           MN YDD DP+V GSP NVFRRCPFT     G+  SDSDSSDS AFHVESTGIFM+SLPDS
Sbjct: 1   MNVYDDDDPVVFGSPGNVFRRCPFTGKPKSGDSDSDSDSSDSGAFHVESTGIFMVSLPDS 60

Query: 61  MEEKDDSLPHSYQTAPEELAPTCSDGRQSVAADAIGAEVSVEYVDDGKAVDLGRDTDVGL 120
           +EE  DSLPHSY+TAPEEL PT SDGR+SVAADAIGAEVS EYVDDGKA+DLGRDTDVGL
Sbjct: 61  LEENADSLPHSYETAPEELVPTGSDGRRSVAADAIGAEVSAEYVDDGKAIDLGRDTDVGL 120

Query: 121 YSEVQSTTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALG 180
           YSEVQST ETVEKDK IEVI  CRSHS EAKK  +PF+ES+VSLG SSSKKLRLSE+ALG
Sbjct: 121 YSEVQSTAETVEKDKSIEVIDDCRSHSSEAKKRRIPFDESDVSLGVSSSKKLRLSEEALG 180

Query: 181 LSFCARTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVS---NGENGEN 240
           LS CAR FVDKFPVDST+SG  SKVSSVD NN+DS  KC+L G  DGKVS   NGENGEN
Sbjct: 181 LSSCARIFVDKFPVDSTNSGGGSKVSSVD-NNDDSGGKCKLNGMNDGKVSNGKNGENGEN 240

Query: 241 QYIYKEKSAEKEVKENMKNTQSHQQS----------KSSSRVLPPSISGVKKNAAEERSA 300
             I+KE+S EKEVKE++KN+QS +QS          +SSSRVLPPS+SGVK++A+ ERS 
Sbjct: 241 HCIFKEESTEKEVKESVKNSQSDKQSNLQEEIANAHQSSSRVLPPSLSGVKRDASGERSN 300

Query: 301 TSEDHPIEVTLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPEY 342
           TSEDHP+EVTLL+ILKIL GEQD E+EF+DETLS LSILDIVQRRGMTFPRPEWWPPEY
Sbjct: 301 TSEDHPMEVTLLEILKILAGEQDRENEFNDETLSNLSILDIVQRRGMTFPRPEWWPPEY 358

BLAST of Lsi07G012570 vs. NCBI nr
Match: KAA0041050.1 (hypothetical protein E6C27_scaffold477G00220 [Cucumis melo var. makuwa] >TYK12060.1 hypothetical protein E5676_scaffold1017G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 475.3 bits (1222), Expect = 4.3e-130
Identity = 265/351 (75.50%), Postives = 287/351 (81.77%), Query Frame = 0

Query: 1   MNRYDDGDPIVSGSPENVFRRCPFTGEDHSDSDSSDSEAFHVESTGIFMLSLPDSMEEKD 60
           M+ + DGD IV+G P NVFRRCPFTG  +SDSDSSDSEA  VESTGIFMLSLPDSMEEKD
Sbjct: 1   MDGHADGDRIVTGLPVNVFRRCPFTGNIYSDSDSSDSEAVPVESTGIFMLSLPDSMEEKD 60

Query: 61  DSLPHSYQTAPEELAPTCSDGRQSVAADAIGAEVSVEYVDDGKAVDLGRDTDVGLYSEVQ 120
           DSLPHS+QTAPEELAPT SDGR+S+AAD+ G EVS EYVDDGKAVDLGRDTDVGLYSEVQ
Sbjct: 61  DSLPHSFQTAPEELAPTGSDGRRSLAADSTGVEVSFEYVDDGKAVDLGRDTDVGLYSEVQ 120

Query: 121 STTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLSFCA 180
           STTETVEK K IEVIG   SHS E KKSG+ FEES VSLGESSSKKLRLSE+ALGLS C 
Sbjct: 121 STTETVEKGKTIEVIGARGSHSSETKKSGILFEESVVSLGESSSKKLRLSEEALGLSSCG 180

Query: 181 RTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVSNGENGENQYIYKEKS 240
           RTF+DKFPVD T+SG         HN++D S K +LKGT+DGKVSN EN ENQ  YKEKS
Sbjct: 181 RTFLDKFPVDLTNSGG-------SHNDDDCSGKYKLKGTDDGKVSNDENDENQCNYKEKS 240

Query: 241 AEKEVKENMKNTQSHQQSK----------SSSRVLPPSISGVKKNAAEERSATSEDHPIE 300
           AEKEVKE++KN QS QQ+K          S  RVLPPS++GVKKNAAEER  TSED PIE
Sbjct: 241 AEKEVKESVKNIQSPQQNKFQEEIANAHQSCCRVLPPSMTGVKKNAAEERFNTSEDQPIE 300

Query: 301 VTLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPEY 342
           VTLLKIL ILKGEQ N  EFDDETLSKLSIL+I Q RGMTFPRPEWWPPEY
Sbjct: 301 VTLLKILMILKGEQVNVIEFDDETLSKLSILEIAQLRGMTFPRPEWWPPEY 344

BLAST of Lsi07G012570 vs. NCBI nr
Match: KGN55825.1 (hypothetical protein Csa_009695 [Cucumis sativus])

HSP 1 Score: 451.1 bits (1159), Expect = 8.8e-123
Identity = 254/351 (72.36%), Postives = 273/351 (77.78%), Query Frame = 0

Query: 1   MNRYDDGDPIVSGSPENVFRRCPFTGEDHSDSDSSDSEAFHVESTGIFMLSLPDSMEEKD 60
           MN +DDGD IV+GSP NV RRCPFTG  +SDSDSSDSEAF VESTGIFMLSLPDSMEEKD
Sbjct: 1   MNAHDDGDHIVTGSPVNVLRRCPFTGNVYSDSDSSDSEAFPVESTGIFMLSLPDSMEEKD 60

Query: 61  DSLPHSYQTAPEELAPTCSDGRQSVAADAIGAEVSVEYVDDGKAVDLGRDTDVGLYSEVQ 120
           DSLPHS+QTAPEELAP  SD R+S+AAD+ G EVS EYVDDGKAVDLGRDTDVGLYSEVQ
Sbjct: 61  DSLPHSFQTAPEELAPNGSDERRSLAADSTGVEVSFEYVDDGKAVDLGRDTDVGLYSEVQ 120

Query: 121 STTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLSFCA 180
           STTETVEK K I VIGVC SHS E KKSG+ FEES VSLGESSSKKLRLS +ALGLS   
Sbjct: 121 STTETVEKGKSIGVIGVCGSHSSEPKKSGILFEESVVSLGESSSKKLRLSVEALGLS--- 180

Query: 181 RTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLKGTEDGKVSNGENGENQYIYKEKS 240
                               S   HN++D S K +LKGT+DGK+SN EN ENQ  YKEKS
Sbjct: 181 --------------------SGGSHNDDDCSGKYKLKGTDDGKISNDENDENQCNYKEKS 240

Query: 241 AEKEVKENMKNTQSHQQSK----------SSSRVLPPSISGVKKNAAEERSATSEDHPIE 300
           AE EVKE++KN +SHQQ+K          S  RVLPPSISGVK NAAEERS TSED PIE
Sbjct: 241 AENEVKESVKNIESHQQNKFQEEIANAHQSCCRVLPPSISGVKNNAAEERSNTSEDQPIE 300

Query: 301 VTLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWPPEY 342
           VTLLKIL ILKG QDN  EFDDETLSKLSIL+I Q RGMTFPRPEWWPPEY
Sbjct: 301 VTLLKILMILKGGQDNTIEFDDETLSKLSILEIAQLRGMTFPRPEWWPPEY 328

BLAST of Lsi07G012570 vs. NCBI nr
Match: KAG7019938.1 (hypothetical protein SDJN02_18905 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.8 bits (351), Expect = 4.3e-29
Identity = 128/348 (36.78%), Postives = 176/348 (50.57%), Query Frame = 0

Query: 10  IVSGSPENVFRRCPFTGEDHS--DSDSSDSEAFH-VESTGIFMLSLPDSMEEKDDSLPH- 69
           ++S S E++ RRC F G   S   S S+ S+  H ++ TG+FM SLP+S+E+++    H 
Sbjct: 17  VLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHHLLQPTGVFMASLPESLEQREQITSHN 76

Query: 70  SYQTAPEELA---PTCSD--GRQSVAADAIGAEVSVE---YVDDGKAVDLGRDTDVGLYS 129
           +YQ  PE+     P   D    Q  A  A GAE +VE     D   AVDLG++ D+G   
Sbjct: 77  AYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEATVEGGCVRDVATAVDLGKNDDLGFRL 136

Query: 130 EVQSTTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLS 189
           EVQST  T E    IEV+GV R    E+   G           ES+SK+L  S +ALG  
Sbjct: 137 EVQSTQHTDE----IEVVGVRRRKVSESDAGG---------ERESASKRLNFSNEALGTE 196

Query: 190 FCARTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLK----GTEDGKVSNGEN---G 249
                 V+  PVD  S G  SK+  VDHN E + E   +       +DGKVSNGE     
Sbjct: 197 SSVPIVVENLPVDLESGGG-SKL--VDHNVEMAEESATVAVESGKVDDGKVSNGEETHCN 256

Query: 250 ENQYIYKEKSAEKEVKENMKNTQSHQQSKSSSRVLPPSISGVKKNAAEERSATSEDHPIE 309
           +N+  + EK  E    E   N +          VLP +++G K   +EE  AT       
Sbjct: 257 KNKEKFAEKRVENSQPEEPCNYEGTMYRDRWRCVLPSTMNGSKN--SEETDATPPS---- 316

Query: 310 VTLLKILKILKGEQDNESEFDDETLSKLSILDIVQRRGMTFPRPEWWP 339
             +++ILK+L  E+  E    D+  + +SIL++V  RGMTFPRP WWP
Sbjct: 317 -IIMEILKLLAEEEGEE----DKEFASMSILEVVSHRGMTFPRPCWWP 337

BLAST of Lsi07G012570 vs. NCBI nr
Match: KAG6584353.1 (hypothetical protein SDJN03_20285, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-19
Identity = 114/317 (35.96%), Postives = 158/317 (49.84%), Query Frame = 0

Query: 10  IVSGSPENVFRRCPFTGEDHS--DSDSSDSEAFH-VESTGIFMLSLPDSMEEKDDSLPH- 69
           ++S S E++ RRC F G   S   S S+ S+  H ++ TG+FM SLP+S+E+++    H 
Sbjct: 17  VLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHHLLQPTGVFMASLPESLEQREQITFHN 76

Query: 70  SYQTAPEELA---PTCSD--GRQSVAADAIGAEVSVE---YVDDGKAVDLGRDTDVGLYS 129
           +YQ  PE+     P   D    Q  A  A GAE +VE     D   AVDLG++ D+G   
Sbjct: 77  AYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEATVEGGCVRDVATAVDLGKNDDLGFRL 136

Query: 130 EVQSTTETVEKDKPIEVIGVCRSHSFEAKKSGLPFEESEVSLGESSSKKLRLSEKALGLS 189
           EVQST +T E    IEV+GV R    E+   G           ES+SK+L  S +ALG  
Sbjct: 137 EVQSTQQTDE----IEVVGVRRRKVSESDAGG---------ERESASKRLNFSNEALGTE 196

Query: 190 FCARTFVDKFPVDSTSSGEVSKVSSVDHNNEDSSEKCQLK----GTEDGKVSNGEN---G 249
                 V+  PVD  S G  SK+  VDHN E + E   +       +DGKVSNGE     
Sbjct: 197 SSVPIVVENLPVDLESGGG-SKL--VDHNVEMAEESATVAVESGKVDDGKVSNGEETHCN 256

Query: 250 ENQYIYKEKSAEKEVKENMKNTQSHQQSKSSSRVLPPSISGVKKNAAEERSATSEDHPIE 308
           +N+  + EK  E    E   N +          VLP +++G K   +EE  AT     I 
Sbjct: 257 KNKEKFAEKRVENSQPEEPCNYEGTMYRDRWRCVLPSTMNGSKN--SEETDATPPS--II 313

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TCP72.1e-13075.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L1F44.3e-12372.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017190 PE=4 SV=1[more]
A0A2N9G3N61.7e-2333.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21927 PE=4 SV=1[more]
A0A5D3BIQ15.9e-1627.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LT005.9e-1629.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042410 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6577658.13.7e-13776.04hypothetical protein SDJN03_25232, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0041050.14.3e-13075.50hypothetical protein E6C27_scaffold477G00220 [Cucumis melo var. makuwa] >TYK1206... [more]
KGN55825.18.8e-12372.36hypothetical protein Csa_009695 [Cucumis sativus][more]
KAG7019938.14.3e-2936.78hypothetical protein SDJN02_18905 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6584353.11.8e-1935.96hypothetical protein SDJN03_20285, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..268
NoneNo IPR availablePANTHERPTHR38221BNAA04G14260D PROTEINcoord: 11..341

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G012570.1Lsi07G012570.1mRNA