Lsi07G012060 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGTTTGTCAGTGTACAATTTGAGTTTAAGTGGAGATCTTGCTTCTTCTGCTAACATATGGATAGTTGGTGGCCCTTCTGCCTCTCTTAATGTAATGATTCTAGGCTGGCAGGTAAAAATAACCTATATTTCTCATCATTTTAATTCTTTGATGTGTTGCACTTTATTTGTTAGATTTTTTTTTTATATAAATAATTTATATTTATATGAAATAAAACTAAGTATTAACCGAGGCTTGTTATCCATATGTCAAATTTTCTCAATAGAACTATATTATTAATCGAAAAATTACTATAAACAGAAAAAATATCAAATTATTTACAAATATAGAAAAATTTCACTGTCTATCAGCGATAGACCGCGATAGAATTCTATCGTTGTCAATAATTGATAGACAGTAAAATTTTTCTATATTTGAAAACTAACCATGAGTTACAAATAATATATTTTAAAAAAATTTAAGACAAATATTCTCTTTTTAAAAACAAAATTGTAGTGAAAAACACACTAGTTGTAATAATTTTAACTTTGTAAAGTCTTGTCTTGTCTTTACTATATTATTCTTGTGTACATTTCAATGTTGATCCTTTTTTTCGATAGTGATTTCAATTATTTGATCTGGTTTGATAAATACCATTTGATTTTTTTTCCTTTTATTTTTTAAAATTAAATTCATAGACACTAATTTCATCCATAAATTTTTCTTCAGTTATCAAAATTTAATTTCTACTAATGTTTTAAAAAATTAGAACAAGTTTTAAATTTTTTTTGAAAAAGTAGTTTTTTTTTTTTTTTTTTTTTTAAATTTGACTAAAAATTCAAATGTTTATTTAAGAAAGATAACACTATAATATAGATATTGAGATAAAATAAACATAAATTTTAAAAATAAAAAATTAGAAATGAAATCGTTACCCGGAGAAAATAATTATAATTATCTATGCAACAAAAATTGCTATTTGTATATTGATTGATTCTTTATTATAGCTTATAACTCTTAAATTTGATGAGTCTTTTCTATTTCTTGGCCTTTTTAGGTGAATCCAGCCATGAATGGTGATGGCCTCACTAGATTGTTTGTGTATTGGACGGTAAGCAAATGAAAGTTCTTCCTCTTTTTATGGGTTTTTCTAGTCACAATTGCATTATTTGTGTAATCAATATGTGACCCTCAATTCTTCATCAAATTTGAAATTAAGTTTATATTACAACTTCTAAACTGAGAAAATTTTGGGATAATATATATGTTGGAAAAATATTGTTTTAGTCCTTAAATCTTGAGTCTAATTTTTATTTGGTCTATAAATTTCAAAATGTTATACCTTTATCTTTATATTTTGAGTTTGAGTTTTTATTTTCTCTGTACATTCTAATGTTTTACACTTTTACTCGAGTTCATACTAATTCTCACTTTTGATTTTTAACATTGACTAGTAGTTAATTAATTTAAAATAATTATGATGTGAATTTTTAAAATTAATTTTATTGGGGAGGAAACTTAGTGAAAATTAATTTAATTATAGTTTTTAATTCGTTGAAATTAATAAGAACGAATGGACCAAGTGGAAACAAAACTCAAAGGGGTAAAACTGTAACATATTGAAACCTTAAGACCAAATGGAAGTTAGACCAACAGTTTAGGGGTAAAACTGTAACATTTGGAAACCTTAAAGACCAAATGAAAACTGGACACAAAACATATAGTGACTTGAAAGGTATTTTTTCCATATATATATATATATATATTATTCAAAACTTTTGTACTTTTTTTAGCACAACACAAATATGGAGTAGGAAAGATTTGAACTTCTGATCTCAAATGCAGAAGTAATCTGATTGATATTTTAACAGGCTGATGGAGGTGCTAAAACGGGATGTTACAATACGTTTTGTCAAGGTTTTGTACAAGTACATCCAAGTATTGTTCCGGGTTCTACTCTTATCCCAACCTCGACCTATAAAGCACAACAATATGACTATCAATTGAGTATCGTTCAGGTAACAAAATTAACTTTTAAACGAGGCCTTAATTATTTATACTATATATAATTAGACACGCACATGCCACATCTAAAGTTTTTTCAACTTTGCATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTCAAGCTTTTGACTGATGATATTTTCATCTCCATTTATTATTCATGTGTTACAGCAAATGTCGAAATTTCAATTTTGTGAAAATGTAAAATAATATATCAATAAAATATTAATGTCCATGTATATTTATGAAAAAGTCATTAGATAAAAATTCATTAAAAAAATGTCTAAGTTAACAAATAAGCATTTCACCTCTTTAATAGAAGTTAAAATTTAATGTGATTTTGTTTAGTTAAATTATAAATTTAGTTTATGAGAGTGTAAGTTTGTGTCTATGGTTCTTGAAGTTTCAAAATTATAAATTTAATTCCTAAGATCGTTTGGTAACTATTAATTTCGTTTTTTTTTTGTTTTTAGTTTTTGAAAATTAAGCCTAATTTCTCCCAATTTTTTACCATGATTTGCATCTCCCTTAATTACAAGAGTTGAATTCTATGTCAAATTCAAAAAAATAAAAACAAGTTTTTAAAAATATATTTTTTTTGTTTTCAAATTTTAGTTTGATTTTTTAAAATATTGGTAAAAAGTAGATAACGAAACAAGAAATTTAGAGTTAGAGTATAAAACCAAGGACTAGATGGTTACCAAAGGGACCTAAGCTTTTGGATATTTACAAAAGTACAAATCTGCAGACACAAAAGTAAAAGTTTATGGTTGAATTAATGTTAAAAAAATTGAAAATTTTAGTCTTTTTTTTTTTAAAAAAAAATAATACTTCAAAGAGCTTTATTGCTCGATAAAAGTATGAGAGAGAGGCTAGGGGAAAACCTTCCAATTTAGAGAGATAATTAAAAATTTGAAGATCTATTAGCTAGAAATCTTTCGAATTACAGCACCAATAAATAGCTAGTGTAATTAAGGATATTCTTCGAACGACAGTCTAGAATCTTGTTGTCTTCCTTGAAGATTTTGTTGGTTTCACTTAAGCCAAATGGACCATGTCATTACACCAATTAAATTTTTCAACGACCTATTAGATACAAAAAGAAAATTAAAATTTTAGAAATCTATTAGCTATAGAATCTTTTAAAAGTTCAAATATCAAATGAACACAAATCCTAAACCCTAGACTTATAGTTTACCCTAATATTACTGGCCTCATATTTATGATATTAATTAGTTCATAAATTTTTTAATTTTCTTGAATATTTCATCAAATTTTCTTATGACACAACGAAAATGTTGATTCACTCCATATATTATTAATGTGGATTATATATATATAGATATATATATGAAAAAATCGATATGTCAACAAAAATTTAATACCGTGATTACATGTGATTAACGACTAATTAATTAGGTGTATTTTGATATGTAGCAAGGAGGGAATTGGTGGGTTCTAGTAGGTGAGAAACAAGAGGGATTGGGATATTGGCCAAAGGAGTTGTTTCCATATCTAAGTGATGGGGCAGATCAAATTGCATGGGGAGGCATTGCAAAGCCTTCCTCAGATGGATTGAGCCCTCCAATAGGAAATAGTCACAAGCCAAATGGTGAATATGATGAAGCTTGTTACTTTAGAAACATTCGCTATATAACAGATGGCTATAAACTTGAATCACCCAATTTGGATAACACAGTAAGTTTTGTGAGTAACTCTACTTGTTATGAATTGAACTCTAATGAGAATTGTGGTCATGATACCATGAAATATTGCTTCACTTTTGGAGGACCAGGTGGATATAATTGTGAAGCCGCCATTATTTAGTTTCTTTCATTGCTTCTTGCTTATGGACGATTATTACAAAAAAGAACTTCCTCCTTTTGATTATGGAATAAATTTTTTAAGGTATTGACATTTCTCTGTATTCTCATTTTCTTGTCATGTAGGCTACTAA ATGTTCGTGAATCCAGCCATGAATGGTGATGGCCTCACTAGATTGTTTGTGTATTGGACGCAAGGAGGGAATTGGTGGGTTCTAGTAGGTGAGAAACAAGAGGGATTGGGATATTGGCCAAAGGAGTTGTTTCCATATCTAAGTGATGGGGCAGATCAAATTGCATGGGGAGGCATTGCAAAGCCTTCCTCAGATGGATTGAGCCCTCCAATAGGAAATAGTCACAAGCCAAATGGCTACTAA ATGTTCGTGAATCCAGCCATGAATGGTGATGGCCTCACTAGATTGTTTGTGTATTGGACGCAAGGAGGGAATTGGTGGGTTCTAGTAGGTGAGAAACAAGAGGGATTGGGATATTGGCCAAAGGAGTTGTTTCCATATCTAAGTGATGGGGCAGATCAAATTGCATGGGGAGGCATTGCAAAGCCTTCCTCAGATGGATTGAGCCCTCCAATAGGAAATAGTCACAAGCCAAATGGCTACTAA MFVNPAMNGDGLTRLFVYWTQGGNWWVLVGEKQEGLGYWPKELFPYLSDGADQIAWGGIAKPSSDGLSPPIGNSHKPNGY Homology
BLAST of Lsi07G012060 vs. ExPASy TrEMBL
Match: A0A6J1CVJ6 (uncharacterized protein LOC111014777 OS=Momordica charantia OX=3673 GN=LOC111014777 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.3e-26 Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of Lsi07G012060 vs. ExPASy TrEMBL
Match: A0A6J1CVW9 (uncharacterized protein LOC111014774 OS=Momordica charantia OX=3673 GN=LOC111014774 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.6e-25 Identity = 51/78 (65.38%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of Lsi07G012060 vs. ExPASy TrEMBL
Match: A0A6J1CW60 (uncharacterized protein LOC111014775 OS=Momordica charantia OX=3673 GN=LOC111014775 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.7e-19 Identity = 52/127 (40.94%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of Lsi07G012060 vs. ExPASy TrEMBL
Match: A0A0A0L400 (Neprosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011710 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.4e-16 Identity = 54/127 (42.52%), Postives = 62/127 (48.82%), Query Frame = 0
BLAST of Lsi07G012060 vs. ExPASy TrEMBL
Match: A0A1R3KA80 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10038 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.0e-16 Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of Lsi07G012060 vs. NCBI nr
Match: XP_022145288.1 (uncharacterized protein LOC111014777 [Momordica charantia]) HSP 1 Score: 125.9 bits (315), Expect = 1.5e-25 Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of Lsi07G012060 vs. NCBI nr
Match: XP_022145286.1 (uncharacterized protein LOC111014774 [Momordica charantia]) HSP 1 Score: 123.6 bits (309), Expect = 7.5e-25 Identity = 51/78 (65.38%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of Lsi07G012060 vs. NCBI nr
Match: XP_022145287.1 (uncharacterized protein LOC111014775 [Momordica charantia]) HSP 1 Score: 102.8 bits (255), Expect = 1.4e-18 Identity = 52/127 (40.94%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of Lsi07G012060 vs. NCBI nr
Match: KAE8650029.1 (hypothetical protein Csa_011504 [Cucumis sativus]) HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17 Identity = 57/125 (45.60%), Postives = 63/125 (50.40%), Query Frame = 0
BLAST of Lsi07G012060 vs. NCBI nr
Match: XP_031738648.1 (uncharacterized protein LOC105435061 [Cucumis sativus]) HSP 1 Score: 99.0 bits (245), Expect = 2.0e-17 Identity = 57/125 (45.60%), Postives = 63/125 (50.40%), Query Frame = 0
BLAST of Lsi07G012060 vs. TAIR 10
Match: AT2G27320.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 61.6 bits (148), Expect = 3.3e-10 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Lsi07G012060 vs. TAIR 10
Match: AT5G60380.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 60.5 bits (145), Expect = 7.3e-10 Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0
BLAST of Lsi07G012060 vs. TAIR 10
Match: AT5G25415.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 60.5 bits (145), Expect = 7.3e-10 Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Lsi07G012060 vs. TAIR 10
Match: AT2G38255.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 58.5 bits (140), Expect = 2.8e-09 Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of Lsi07G012060 vs. TAIR 10
Match: AT5G05030.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 57.8 bits (138), Expect = 4.7e-09 Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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