Lsi07G011860 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G011860
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Imidazole glycerol phosphate synthase hisHF, chloroplastic
Location	chr07: 17401685 .. 17402371 (-)
RNA-Seq Expression	Lsi07G011860
Synteny	Lsi07G011860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCTATTGCGATGAAGACGACCTATGGAAATGTCCAAAACACCCTTCCAAACGCCGGAGGATCGGAATCTGTCCTCTCTGCCTCCGTGACCGTCTCGTCACTCTCTGTCCTGACTGCGCCAACGTCCGCCCCTGTAACTGTTGTGCCACCACCACTACTACCACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTCGTTTCTCCTCTGCCGACCTCGGATCCGTCGGCCGTCTCTCCAATCTCATCGACGGCGAACCGGCTTTCCGTCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTACGATCGAGATCGCGATTCGTCGCTGATTCCGTCGATGATTGTTCCTCGGCCGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTCGATTTTCAGGTCGAAGAGTAAGAAGAGCCACGATGGCGGAAGAATCGAAGCGGCTGTGGAAATCGATTTCAGACGGAGAGCGAAGGAAGTAGCGGAAGTTGAAGAGGCGATGAGACGGAAATTGATGATCCGGTCGAGATCGGTTGCGGTTTCCGATTCCGGTGGGATGTATGTCCGGCCGCCGGTGAAGGCTAGGGCATGGTACTTTCCGAGTCCGATCAAAGCATTCCGGCAATCGAAGATTTCCAAGGCGGTTCTCACGGAACGGTCTCCGTTGCACAGAGGTTGA

mRNA sequence

ATGGCGTTCTATTGCGATGAAGACGACCTATGGAAATGTCCAAAACACCCTTCCAAACGCCGGAGGATCGGAATCTGTCCTCTCTGCCTCCGTGACCGTCTCGTCACTCTCTGTCCTGACTGCGCCAACGTCCGCCCCTGTAACTGTTGTGCCACCACCACTACTACCACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTCGTTTCTCCTCTGCCGACCTCGGATCCGTCGGCCGTCTCTCCAATCTCATCGACGGCGAACCGGCTTTCCGTCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTACGATCGAGATCGCGATTCGTCGCTGATTCCGTCGATGATTGTTCCTCGGCCGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTCGATTTTCAGGTCGAAGAGTAAGAAGAGCCACGATGGCGGAAGAATCGAAGCGGCTGTGGAAATCGATTTCAGACGGAGAGCGAAGGAAGTAGCGGAAGTTGAAGAGGCGATGAGACGGAAATTGATGATCCGGTCGAGATCGGTTGCGGTTTCCGATTCCGGTGGGATGTATGTCCGGCCGCCGGTGAAGGCTAGGGCATGGTACTTTCCGAGTCCGATCAAAGCATTCCGGCAATCGAAGATTTCCAAGGCGGTTCTCACGGAACGGTCTCCGTTGCACAGAGGTTGA

Coding sequence (CDS)

ATGGCGTTCTATTGCGATGAAGACGACCTATGGAAATGTCCAAAACACCCTTCCAAACGCCGGAGGATCGGAATCTGTCCTCTCTGCCTCCGTGACCGTCTCGTCACTCTCTGTCCTGACTGCGCCAACGTCCGCCCCTGTAACTGTTGTGCCACCACCACTACTACCACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTCGTTTCTCCTCTGCCGACCTCGGATCCGTCGGCCGTCTCTCCAATCTCATCGACGGCGAACCGGCTTTCCGTCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTACGATCGAGATCGCGATTCGTCGCTGATTCCGTCGATGATTGTTCCTCGGCCGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTCGATTTTCAGGTCGAAGAGTAAGAAGAGCCACGATGGCGGAAGAATCGAAGCGGCTGTGGAAATCGATTTCAGACGGAGAGCGAAGGAAGTAGCGGAAGTTGAAGAGGCGATGAGACGGAAATTGATGATCCGGTCGAGATCGGTTGCGGTTTCCGATTCCGGTGGGATGTATGTCCGGCCGCCGGTGAAGGCTAGGGCATGGTACTTTCCGAGTCCGATCAAAGCATTCCGGCAATCGAAGATTTCCAAGGCGGTTCTCACGGAACGGTCTCCGTTGCACAGAGGTTGA

Protein sequence

MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG

Homology

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BLAST of Lsi07G011860 vs. ExPASy TrEMBL
Match: A0A6J1HN71 (uncharacterized protein LOC111465171 OS=Cucurbita maxima OX=3661 GN=LOC111465171 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.2e-106
Identity = 208/231 (90.04%), Postives = 217/231 (93.94%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCCATTTTT   S
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLISLCPDCANVRPCNCCATTTTT---S 60

Query: 61  SSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVD 120
           SSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADS D
Sbjct: 61  SSSSSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGD 120

Query: 121 DCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIR 180
           DCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIR
Sbjct: 121 DCSSSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIR 180

Query: 181 SRSVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           SRSVAVSDS G +VR PVKA+AWYFPSPIKAFRQSK+SKAVLTERSPLHRG
Sbjct: 181 SRSVAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVSKAVLTERSPLHRG 228

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BLAST of Lsi07G011860 vs. ExPASy TrEMBL
Match: A0A6J1E664 (uncharacterized protein LOC111430968 OS=Cucurbita moschata OX=3662 GN=LOC111430968 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.2e-106
Identity = 209/231 (90.48%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTT   S
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTT---S 60

Query: 61  SSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVD 120
           SSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADS D
Sbjct: 61  SSSSSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGD 120

Query: 121 DCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIR 180
           DCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIR
Sbjct: 121 DCSSSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIR 180

Query: 181 SRSVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           SRSVAVSDS G +VR PVKA+AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Sbjct: 181 SRSVAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVPKAVLTERSPLHRG 228

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BLAST of Lsi07G011860 vs. ExPASy TrEMBL
Match: A0A0A0L6G5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009520 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.1e-106
Identity = 208/228 (91.23%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATT TTTT S
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTNTTTT-S 60

Query: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVDDCS 120
           SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL  RSRFVADS DDCS
Sbjct: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL--RSRFVADSGDDCS 120

Query: 121 SAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRS 180
           S+GNSAR SSFWSIF+SKSKK +DGGR+EAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRS
Sbjct: 121 SSGNSARTSSFWSIFKSKSKKRNDGGRMEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRS 180

Query: 181 VAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           VAV+DSGG  VRPPVKA+ WYFPSPIKAFRQSK+ K VLTERSPLHRG
Sbjct: 181 VAVADSGGRIVRPPVKAKTWYFPSPIKAFRQSKLPKPVLTERSPLHRG 225

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BLAST of Lsi07G011860 vs. ExPASy TrEMBL
Match: A0A5A7UH78 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001530 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 206/229 (89.96%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATT TTTT S
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTNTTTT-S 60

Query: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVDDCS 120
           SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL  RSRFVADSVDDCS
Sbjct: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL--RSRFVADSVDDCS 120

Query: 121 SAG-NSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSR 180
           S+G NSAR SSFWSIFRSKSKK +DGG      EIDFRRRAKEVAEVEEAMRRKLMIRSR
Sbjct: 121 SSGNNSARTSSFWSIFRSKSKKRNDGG------EIDFRRRAKEVAEVEEAMRRKLMIRSR 180

Query: 181 SVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           SVAV+DSGG  VRPPVK R WYFPSPIKAFRQ+KISK VLTERSPLHRG
Sbjct: 181 SVAVADSGGRIVRPPVKPRTWYFPSPIKAFRQTKISKPVLTERSPLHRG 220

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BLAST of Lsi07G011860 vs. ExPASy TrEMBL
Match: A0A1S3CQR3 (uncharacterized protein LOC103503260 OS=Cucumis melo OX=3656 GN=LOC103503260 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 206/229 (89.96%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATT TTTT S
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTNTTTT-S 60

Query: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVDDCS 120
           SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL  RSRFVADSVDDCS
Sbjct: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL--RSRFVADSVDDCS 120

Query: 121 SAG-NSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSR 180
           S+G NSAR SSFWSIFRSKSKK +DGG      EIDFRRRAKEVAEVEEAMRRKLMIRSR
Sbjct: 121 SSGNNSARTSSFWSIFRSKSKKRNDGG------EIDFRRRAKEVAEVEEAMRRKLMIRSR 180

Query: 181 SVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           SVAV+DSGG  VRPPVK R WYFPSPIKAFRQ+KISK VLTERSPLHRG
Sbjct: 181 SVAVADSGGRIVRPPVKPRTWYFPSPIKAFRQTKISKPVLTERSPLHRG 220

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BLAST of Lsi07G011860 vs. NCBI nr
Match: XP_038905105.1 (uncharacterized protein LOC120091238 [Benincasa hispida])

HSP 1 Score: 411.4 bits (1056), Expect = 5.2e-111
Identity = 214/228 (93.86%), Postives = 220/228 (96.49%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTT S
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTT-S 60

Query: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVDDCS 120
           SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFV D+VDDCS
Sbjct: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVDDAVDDCS 120

Query: 121 SAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRS 180
           S+GNSARASSFWSIFRSKSKKSHDGGR EA VEIDFRRRAKEVAE+EEAMRRKLMIRSRS
Sbjct: 121 SSGNSARASSFWSIFRSKSKKSHDGGRTEAVVEIDFRRRAKEVAEIEEAMRRKLMIRSRS 180

Query: 181 VAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           VAV+DSGG  VRPPVKA+AWYFPSPIK FRQSKISK+VLTERSPLHRG
Sbjct: 181 VAVADSGGRLVRPPVKAKAWYFPSPIKVFRQSKISKSVLTERSPLHRG 227

[Close]

BLAST of Lsi07G011860 vs. NCBI nr
Match: XP_022965250.1 (uncharacterized protein LOC111465171 [Cucurbita maxima])

HSP 1 Score: 394.4 bits (1012), Expect = 6.5e-106
Identity = 208/231 (90.04%), Postives = 217/231 (93.94%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCCATTTTT   S
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLISLCPDCANVRPCNCCATTTTT---S 60

Query: 61  SSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVD 120
           SSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADS D
Sbjct: 61  SSSSSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGD 120

Query: 121 DCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIR 180
           DCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIR
Sbjct: 121 DCSSSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIR 180

Query: 181 SRSVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           SRSVAVSDS G +VR PVKA+AWYFPSPIKAFRQSK+SKAVLTERSPLHRG
Sbjct: 181 SRSVAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVSKAVLTERSPLHRG 228

[Close]

BLAST of Lsi07G011860 vs. NCBI nr
Match: XP_022923201.1 (uncharacterized protein LOC111430968 [Cucurbita moschata] >KAG7015751.1 hypothetical protein SDJN02_23389, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.4 bits (1012), Expect = 6.5e-106
Identity = 209/231 (90.48%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTT   S
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTT---S 60

Query: 61  SSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVD 120
           SSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADS D
Sbjct: 61  SSSSSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGD 120

Query: 121 DCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIR 180
           DCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIR
Sbjct: 121 DCSSSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIR 180

Query: 181 SRSVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           SRSVAVSDS G +VR PVKA+AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Sbjct: 181 SRSVAVSDSSGRFVRTPVKAKAWYFPSPIKAFRQSKVPKAVLTERSPLHRG 228

[Close]

BLAST of Lsi07G011860 vs. NCBI nr
Match: XP_004148742.1 (uncharacterized protein LOC101206077 [Cucumis sativus] >KGN55746.1 hypothetical protein Csa_009559 [Cucumis sativus])

HSP 1 Score: 394.0 bits (1011), Expect = 8.5e-106
Identity = 208/228 (91.23%), Postives = 215/228 (94.30%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATT TTTT S
Sbjct: 1   MAFYGDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTNTTTT-S 60

Query: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVDDCS 120
           SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL  RSRFVADS DDCS
Sbjct: 61  SSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFL--RSRFVADSGDDCS 120

Query: 121 SAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRS 180
           S+GNSAR SSFWSIF+SKSKK +DGGR+EAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRS
Sbjct: 121 SSGNSARTSSFWSIFKSKSKKRNDGGRMEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRS 180

Query: 181 VAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           VAV+DSGG  VRPPVKA+ WYFPSPIKAFRQSK+ K VLTERSPLHRG
Sbjct: 181 VAVADSGGRIVRPPVKAKTWYFPSPIKAFRQSKLPKPVLTERSPLHRG 225

[Close]

BLAST of Lsi07G011860 vs. NCBI nr
Match: XP_023552753.1 (uncharacterized protein LOC111810294 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 7.2e-105
Identity = 207/231 (89.61%), Postives = 215/231 (93.07%), Query Frame = 0


Query: 1   MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSS 60
           MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCA+VRPCNCCATTTTT   S
Sbjct: 1   MAFYGDEDDVWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCAHVRPCNCCATTTTT---S 60

Query: 61  SSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVD 120
           SSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADS D
Sbjct: 61  SSSSSSSSFSRFSSADLASLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSGD 120

Query: 121 DCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIR 180
           DCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIR
Sbjct: 121 DCSSSGNSARASSFWSIFRSKTKKSRDGGRIEAAVEFDFKRRAKEVAEVEEAMRRTLMIR 180

Query: 181 SRSVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
           SRSVAVSDS G +VR P KA+AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Sbjct: 181 SRSVAVSDSSGRFVRTPAKAKAWYFPSPIKAFRQSKVPKAVLTERSPLHRG 228

[Close]

BLAST of Lsi07G011860 vs. TAIR 10
Match: AT1G32690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29
Identity = 98/236 (41.53%), Postives = 128/236 (54.24%), Query Frame = 0


Query: 6   DEDDLWKCPKHPSKRRRI---GICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSS 65
           DED   +C KH SKR      G+CP CL +RL +LCPDCA+  PC+ C++    + S SS
Sbjct: 2   DEDGFSQCSKHFSKRGYFSGGGVCPFCLHERLSSLCPDCAHDLPCS-CSSRAAVSFSPSS 61

Query: 66  SSSSSSFS------RFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSV 125
           SSSSSSFS       F+ + +GSVGR+++LI+ EPAFRRS+S+ AIP          DSV
Sbjct: 62  SSSSSSFSIFAGDISFNISGVGSVGRVASLIECEPAFRRSKSM-AIP-------IKPDSV 121

Query: 126 DDCS-SAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLM 185
            D     G S + SSFW IF         G R +                     +  +M
Sbjct: 122 IDSGLDHGRSKKTSSFWRIFM--------GNRGDT--------------------KPAIM 181

Query: 186 IRSRSVAVSDSGGMYVRP---PVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
            +SRSVAV+   G    P     K + W FPSPIK FRQS++SK +  +RSPL+RG
Sbjct: 182 KKSRSVAVAGEFGFSPVPVPATGKGKGWNFPSPIKVFRQSRVSKMIFQQRSPLYRG 200

[Close]

BLAST of Lsi07G011860 vs. TAIR 10
Match: AT2G35200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32690.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 4.3e-23
Identity = 81/221 (36.65%), Postives = 114/221 (51.58%), Query Frame = 0


Query: 12  KCPKHPSKRRRI-GICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFS 71
           KC +H  +   + G+CP CL +RL +LCPDCA+  PC+C    T   + SS      SF+
Sbjct: 22  KCSRHEGRFVCVAGVCPYCLHERLSSLCPDCAHDLPCSC----TPRASVSSRGEGDVSFA 81

Query: 72  RFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSRFVADSVDDCSSAGNSARASS 131
           R     +GSVGR++NLI+ EPAFRRS S+    F  ++   + ++  D        R   
Sbjct: 82  R-----IGSVGRVANLIECEPAFRRSTSITGPYFWSAKPEPILETEKDL----KPGRGRW 141

Query: 132 FWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMY 191
            W +FR   ++     +I+AA                     K+M +S SVA    G + 
Sbjct: 142 LWRLFRGNREEE---TKIKAA---------------------KVMKKSNSVA----GEVL 201

Query: 192 VRP-PV--KARAWYFPSPIKAFRQSKISKAVLTERSPLHRG 229
             P PV  K   WYFPSPIK FRQS++SK +  +RSPL+RG
Sbjct: 202 FSPTPVTSKGNGWYFPSPIKVFRQSRVSKMIFQQRSPLYRG 201

The following BLAST results are available for this feature:

BLAST of Lsi07G011860 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi07G011860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HN71	3.2e-106	90.04	uncharacterized protein LOC111465171 OS=Cucurbita maxima OX=3661 GN=LOC111465171...	[more]
A0A6J1E664	3.2e-106	90.48	uncharacterized protein LOC111430968 OS=Cucurbita moschata OX=3662 GN=LOC1114309...	[more]
A0A0A0L6G5	4.1e-106	91.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009520 PE=4 SV=1	[more]
A0A5A7UH78	1.8e-101	89.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CQR3	1.8e-101	89.96	uncharacterized protein LOC103503260 OS=Cucumis melo OX=3656 GN=LOC103503260 PE=...	[more]

BLAST of Lsi07G011860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905105.1	5.2e-111	93.86	uncharacterized protein LOC120091238 [Benincasa hispida]	[more]
XP_022965250.1	6.5e-106	90.04	uncharacterized protein LOC111465171 [Cucurbita maxima]	[more]
XP_022923201.1	6.5e-106	90.48	uncharacterized protein LOC111430968 [Cucurbita moschata] >KAG7015751.1 hypothet...	[more]
XP_004148742.1	8.5e-106	91.23	uncharacterized protein LOC101206077 [Cucumis sativus] >KGN55746.1 hypothetical ...	[more]
XP_023552753.1	7.2e-105	89.61	uncharacterized protein LOC111810294 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi07G011860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32690.1	1.4e-29	41.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35200.1	4.3e-23	36.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..74
None	No IPR available	PANTHER	PTHR34197:SF2	OS04G0591300 PROTEIN	coord: 1..228
None	No IPR available	PANTHER	PTHR34197	OS04G0591300 PROTEIN	coord: 1..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G011860.1	Lsi07G011860.1	mRNA