Lsi07G011300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G011300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	chr07: 16740003 .. 16744302 (+)
RNA-Seq Expression	Lsi07G011300
Synteny	Lsi07G011300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGGGGCATTAGTGCTATTTTGATAAATGCATGGGTGGATTATTGAAATTTCCAAATTTCCCAAACTTTTAGCAATCTGTATTTCTCACCCAACCAAATCCCCAAAGTCATCGTCTCTCCGATTCTTCCTGGTTTCAGAGCTGAAGCAGAGCAGTGCTGTAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCACGCCTCCTCTCTCGGCCTCCCAAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTCTCCTTTTCTTCGGCTTCATCAGTCCTCAAAACAACCTCTCTTAAACCCTCGAGAACCCTAGCTCCACCGTGCTCCGTCCTTATGACGGCTCCACAGACGCCGGATGCCGCCCGTAGAGGCGCCGAGACTGACGCCATGGGCCTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATCAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATCAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGGTATTCACGAGTTGATTTTTTGTGCATAATGTAGTTGGTAAAGATATGGAATATGTGATTAGGGCTCAGTTTTATTCTTTCCAAACGATTTAGGTAATTTAATTTCTATTAATATGCCTAATTTTCTTTAGAGTTTTATTCACCTGCATTGCAAACAGTTAGCCCACTCGTTGGTGCATTCATTCCCGTGACTATTCTGGTTCTAGAGTTGACATTGATAAAACAAGAGATTTCTTTGATCAGTGCCCTTTAAAAGAATGGCAATGGTTGGAGTTTTAAATTTAGGAGCAGGACAAACACCTGGCTTCATCCTTCCCGTCTAAGTTATATTTTCCAAACATTTTCTGAATTTCCAAATGCTAAAGATTTTTGGAATGGGGCAATCTGAACTTGGGATTTTCAGCTCAGAAGAAACCCCTTTGACTTGATAGAGAGCCATAAGAATGGTTGACATTTGTTCAAAAGATGGAAAGCAATCAGCTAAATCTTACTATCTTAGTAAAGATAAATTTTGTTGGAAGTTTGAAACCTTTGTCTTGTATCCACTTGCAAATCTTCCAACCTCCAGCTGAATTGTAGAGAAAGCAGGTTGGATGAACCCTTTTTATCTTCGGTTTGGGGAGGAAAAGACTTCGTTCTTCATTTGGACTATGGCTTACAAGAGCCTAAACACTTGTGATTGGATTAAAAAGAAGAACCCTTCCATGGCTTTATCTCCTTATGTTTGCCCTTTCTTTTCCTCTTTTTTTTGAAACGGAAACAGAACTTTTCATTGATATAATGAAAAGAGCAAAGGCTCCAATTACAATGAGACAAAACCAAATAAGCTAAGAAATTTAGAAACATAGGATCAGGAGGTGCATCCGGATATCTCAACTAGGTTGACACAGCCCTAGCACCCTCATCATTTTCCTATACAAAATACAAAAATTCAGAAAAAGCCAATATTCTTAGCTACTTGGTTACATAGAAATAATAAGAGCATTCCAATTGAGATAAATGTCCTAAATAGAATAATCTTCAAAGAGTTTGGACTGGGAGCTCCAAGAAGAAGCTAAGAGATGGGTTGAACCCCATCTGTCTAACCAATCCTTTGAACTATCATGGAAGACTCTCTAATTACGTTCAAACCAAATCTCAGAAATCAAGGCTTTGACTGCATTTGTCCATAATAACTGTGAGCTCTAGAAGAGTGAGAAGGACCAACCAAAAGATGAGAGATATTATCCGTAACTGTGTTGCCCAAAACCCATTGAAAACCAAAGCAAGAAAATAATTTCCACCAACAATTTCTGGAGAAAGAGCAATCAAATAACAAGTGATGCAAATCCTCTCCGTTTGCTGAACATAGAGGACAAATTGAGGGTGAAAGATATTTATTTCGAAGCTTATTTTGCAAAGTAAATGAACAATTGAGGGAACCAAAAGTTTAGCCAATCAAAAACTCCATTTTCTATAATGATCAATTTCCCAAATCTCCTTTGGAAAATGACTAACACTCCTCCTCCTAAGTGAGTGAGCATGTTGGCCAAATAAAAATCTTTTCAACAATTAAACATCCAGGCCTTCTTGTTCAATCCCTATGACATTCTCAGTGGCAGGTGATAAAGCATAGAGGTGGTGGAAGTTTAAGATACTAAAGGTTCCCTAATTACTAAAGTATGGTAGTAATGCATCTATTACCCGTCTCTCCCTTTTCATTTGTGGTATATTTTGAATAACTTGCTAGGAGTTATGAAAAAGAACTGAATTCAGAATGTAAAAACATCTACATATTATTATCTATTTGTATCAAGTTCTATGTTGCACTGGATAACACTTGGTCCCACACAGTATAATTTTATCTTGAAAGCATGTAATCTATATATATAATATGCAACCAATCTTTACATCTAATTTTTTGCATTTGAATGAGAACTGAATATTTCTTTTCATACTTCAATGGAGAAATGTAATGTGCTTGTCTATGGCTAGAGATGAGTGTATTCGTCTACTTTACTTTACTACATGAATGGGAAGATTAGCCAACTGTGAGAACTATACATATCTTCCCTGATTGTTAATTTATTTCTGTTTTATTCTTGTTTCGATGCTTTCCATGGCCTTCATGTACATAGGAAATCTTCTAGAGTAATTTAATTTAGATTTCTGTGGTTTATGGATCACCTTTTCATAATCTTCTCTTGGCATCTTTGATGTGCAACCAGTTTCTAATGGTAAATCTATCATTCACTACCAAACCATCATTTTTCGAAATGTATATTGATATGTAACTTAAGGATGCTCGTGAGACTTGAGAGGCGTCAACAGAAGAAACTACGTACTTTGCCTAACCCAGTTCATTTTTCAGAAAATGTTATGTTTTTAAGTTCCACGTCCACTTATCCTCATGTTGATTAAGGAACACACTTCCAACTATCTTGTAATCCAAACCCTGTCTTCCAATTGTCTATCAAACAGATTCCTTCCCGGTCCAATGGAGTAGATATTATGAAATACCTGACTCAAAGGTGGAATCAAACCAGTTATCTTCCTAGATTCTAAGCCCGTTTCCCATCTTATAAAGAAAACCCTTTCCCGATGAACCCATACATTTAGCTAGACCAGACCAGGGGCAAAAGGCAGACTAGCTTACGTAGTTTTATTTGTTCTCAGAGCACCAGGACTTAAAATTTTAGAAGTGGGAGTGCCATATTCATGACTCACGAGTATATGAATTCTCTTGTCATTGTTTATTTGAAGCTGGAAATATCGATTACTAGGCTTTTTAAATATATATATTTCTGTTTTTCCCTCTCTGGTCCTGAGAAAATTTAGGTTAGGAGGATATTCAGCTTTCTATGAGCGGCACCTGATCTCATTTAATTTTATTTTGAAAGTGGATGGTCTTCTTAGTTAATATTTGGTGTTTGGTTGCAGTACATTAACCTTGACTGATTTCCTTCTATTAATTTCGTTTTCATTAGTGCTACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGTGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGCGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATTGACAAAGATAGCATTATACCTCTCATGCCAGTGCCAGAAAGAGTGAAAGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAGTTTCTGGCGTTTCGGCAAACCTTTCTTTAGGCTTTTGATTTATATGATTTACATGTAGGATCTTATGTGTAAGCAAAGTCATGGTAGGTGGAAACTAGAAATATGCTGGAAATTGATGACCTAAACACCTTTAGAGTATCAACTTTTGGCAAATTGTCTCTACTTACCAGAAGTTAAAAGGTATTGGGTATTTGGACTCTTTTTTTGTCTATGACATTTCAAATGAGCATTCTGAGTAAGGAAAAATTGGCATTGAGTCATATTTTTTATTGGCAGTGTAT

mRNA sequence

ATTTGGGGCATTAGTGCTATTTTGATAAATGCATGGGTGGATTATTGAAATTTCCAAATTTCCCAAACTTTTAGCAATCTGTATTTCTCACCCAACCAAATCCCCAAAGTCATCGTCTCTCCGATTCTTCCTGGTTTCAGAGCTGAAGCAGAGCAGTGCTGTAAATCCATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCACGCCTCCTCTCTCGGCCTCCCAAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTCTCCTTTTCTTCGGCTTCATCAGTCCTCAAAACAACCTCTCTTAAACCCTCGAGAACCCTAGCTCCACCGTGCTCCGTCCTTATGACGGCTCCACAGACGCCGGATGCCGCCCGTAGAGGCGCCGAGACTGACGCCATGGGCCTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATCAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATCAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTGCTACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGTGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGCGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATTGACAAAGATAGCATTATACCTCTCATGCCAGTGCCAGAAAGAGTGAAAGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAGTTTCTGGCGTTTCGGCAAACCTTTCTTTAGGCTTTTGATTTATATGATTTACATGTAGGATCTTATGTGTAAGCAAAGTCATGGTAGGTGGAAACTAGAAATATGCTGGAAATTGATGACCTAAACACCTTTAGAGTATCAACTTTTGGCAAATTGTCTCTACTTACCAGAAGTTAAAAGGTATTGGGTATTTGGACTCTTTTTTTGTCTATGACATTTCAAATGAGCATTCTGAGTAAGGAAAAATTGGCATTGAGTCATATTTTTTATTGGCAGTGTAT

Coding sequence (CDS)

ATGGAGCTTCTTTCACGCTGTTCTACTCTTATTCCTCACGCCTCCTCTCTCGGCCTCCCAAATTCTCATGGAAAACCATCAAATTTCTTCCCCAAGCTCAAATCCACTCTCTCCTTTTCTTCGGCTTCATCAGTCCTCAAAACAACCTCTCTTAAACCCTCGAGAACCCTAGCTCCACCGTGCTCCGTCCTTATGACGGCTCCACAGACGCCGGATGCCGCCCGTAGAGGCGCCGAGACTGACGCCATGGGCCTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGACTTTGTGGCCGATGCTATTATCAGTCAGCTCTTGCTCTTGGATGCTCAGGACTCTACTAAAGATATCAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTGCTACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGTGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGATGTGGAAATTCAAGCACGCGAAATCATGCATAACAAGAACAATGTTACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCGCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATTGACAAAGATAGCATTATACCTCTCATGCCAGTGCCAGAAAGAGTGAAAGCAAGTTTAAATTATGAAGAAATTAGTAAAGATCCCAGAAAATTCTTGACACCAGATGTCCCTGACGACGAGATATATTAG

Protein sequence

MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPPCSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY

Homology

[Close]

BLAST of Lsi07G011300 vs. ExPASy Swiss-Prot
Match: Q94B60 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.0e-101
Identity = 212/299 (70.90%), Postives = 234/299 (78.26%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPK-----LKSTLSFSSASSVLKTTSLKPSR 60
           M  LS  S+L P   S  L +S    S+ FPK     LK T      S  L+TTS  P R
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPT---KLISPPLRTTSPSPLR 60

Query: 61  TLAPPCSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA 120
                 +  +   QT ++A RGAE+D MGLLLRERIVFLG+SIDDFVADAI+SQLLLLDA
Sbjct: 61  F----ANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDA 120

Query: 121 QDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRL 180
           +D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR 
Sbjct: 121 KDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRF 180

Query: 181 AMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDR 240
           AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V KDIDRDR
Sbjct: 181 AMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDR 240

Query: 241 YMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           YMSPIEAVEYGLIDGVID DSIIPL PVP+RVK  +NYEEISKDP KFLTP++PDDEIY
Sbjct: 241 YMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of Lsi07G011300 vs. ExPASy Swiss-Prot
Match: Q3ANI8 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) OX=110662 GN=clpP1 PE=3 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 7.8e-54
Identity = 106/195 (54.36%), Postives = 143/195 (73.33%), Query Frame = 0


Query: 60  PCSVLMTAPQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDS 119
           P S     P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D 
Sbjct: 2   PVSAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDP 61

Query: 120 TKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMP 179
            KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+P
Sbjct: 62  EKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALP 121

Query: 180 NARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMS 239
           NARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++S
Sbjct: 122 NARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLS 181

Query: 240 PIEAVEYGLIDGVID 254
           P EAVEYGLID V+D
Sbjct: 182 PAEAVEYGLIDRVVD 196

[Close]

BLAST of Lsi07G011300 vs. ExPASy Swiss-Prot
Match: Q3B0U1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-53
Identity = 105/195 (53.85%), Postives = 142/195 (72.82%), Query Frame = 0


Query: 60  PCSVLMTAPQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDS 119
           P S     P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D 
Sbjct: 2   PISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDP 61

Query: 120 TKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMP 179
            KDI++++NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+P
Sbjct: 62  EKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALP 121

Query: 180 NARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMS 239
           NARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++S
Sbjct: 122 NARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLS 181

Query: 240 PIEAVEYGLIDGVID 254
           P EAVEYGLID V+D
Sbjct: 182 PAEAVEYGLIDRVVD 196

[Close]

BLAST of Lsi07G011300 vs. ExPASy Swiss-Prot
Match: Q7V992 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-52
Identity = 103/187 (55.08%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 68  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI 127
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 128 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 187
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQ 146

Query: 188 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 247
           PLGGA GQA+D+EIQA+EI+  K  +  +++E TG P  K+ +D DRD ++SP +AVEYG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYG 206

Query: 248 LIDGVID 254
           LID V+D
Sbjct: 207 LIDRVVD 213

[Close]

BLAST of Lsi07G011300 vs. ExPASy Swiss-Prot
Match: O34125 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-52
Identity = 103/191 (53.93%), Postives = 143/191 (74.87%), Query Frame = 0


Query: 68  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFI 127
           P   + + RG    D    LLRERIVFLG  +DD VAD+I++QLL L+A+D  KDI+L+I
Sbjct: 39  PTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYI 98

Query: 128 NSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 187
           NS GGS++A MAIYD +Q V  DV+TI  G+AAS  + +L GG +GKR+A+P+ARIM+HQ
Sbjct: 99  NSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQ 158

Query: 188 PLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 247
           PLGGA GQA+D+EIQAREI+++K+ +  ++++ TG P EK++ D DRD +MSP EA  YG
Sbjct: 159 PLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYG 218

Query: 248 LIDGVIDKDSI 258
           LID V+ + ++
Sbjct: 219 LIDQVLTRPTM 229

[Close]

BLAST of Lsi07G011300 vs. ExPASy TrEMBL
Match: A0A1S3BJF4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490719 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.0e-150
Identity = 284/294 (96.60%), Postives = 290/294 (98.64%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTLIP ASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTT+LKPSRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVID+DSIIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Lsi07G011300 vs. ExPASy TrEMBL
Match: A0A6J1CWB9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111014827 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.7e-149
Identity = 281/294 (95.58%), Postives = 285/294 (96.94%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTLIPHASSL LPNSH KPSNF+PKLKS+LSF SA SVLK T+LKPSRTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSVLMTAPQTPD ARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of Lsi07G011300 vs. ExPASy TrEMBL
Match: A0A6J1EC18 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111431188 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.1e-146
Identity = 277/294 (94.22%), Postives = 286/294 (97.28%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTLIPHASSLGL NSHGKPSNF+PKLKS+LSF SASSVLKTT+ KPSRTLA  
Sbjct: 48  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLATS 107

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 108 CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 167

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 168 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 227

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 228 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 287

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 288 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of Lsi07G011300 vs. ExPASy TrEMBL
Match: A0A6J1HNH6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111465249 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.8e-144
Identity = 274/294 (93.20%), Postives = 283/294 (96.26%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTLIPHASSLGL NSHGKPSNF+PKLKS LSF SASSVLKTT+ KPSRTLA  
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSGLSFPSASSVLKTTARKPSRTLATS 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
            SV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  SSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVIQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KF +PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFFSPDVPDDEIY 294

[Close]

BLAST of Lsi07G011300 vs. ExPASy TrEMBL
Match: A0A0A0L3S1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G005040 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142
Identity = 270/294 (91.84%), Postives = 280/294 (95.24%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTL PHASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTT+LKPSRTL PP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYG IDGVID+DSIIPLMPVP++VK   NY E+ KDP KFLTPDVPDDEI+
Sbjct: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of Lsi07G011300 vs. NCBI nr
Match: XP_038876611.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 541.6 bits (1394), Expect = 4.3e-150
Identity = 284/294 (96.60%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTL+PHASS+GLP SHGKPSNF PKLKSTLSF SASSVLKTT+ KPSRT APP
Sbjct: 1   MELLSRCSTLLPHASSIGLPTSHGKPSNFLPKLKSTLSFPSASSVLKTTAPKPSRTPAPP 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDP KFL PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPTKFLNPDVPDDEIY 294

[Close]

BLAST of Lsi07G011300 vs. NCBI nr
Match: XP_008448589.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149
Identity = 284/294 (96.60%), Postives = 290/294 (98.64%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTLIP ASSLGLPNSHGKPSNFFPKLKSTLSF SASSVLKTT+LKPSRTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSV-MTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVID+DSIIPL+PVPERVKA+LNYEE+SKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Lsi07G011300 vs. NCBI nr
Match: XP_022145352.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia])

HSP 1 Score: 536.2 bits (1380), Expect = 1.8e-148
Identity = 281/294 (95.58%), Postives = 285/294 (96.94%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTLIPHASSL LPNSH KPSNF+PKLKS+LSF SA SVLK T+LKPSRTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSVLMTAPQTPD ARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of Lsi07G011300 vs. NCBI nr
Match: KAG7015794.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 530.8 bits (1366), Expect = 7.5e-147
Identity = 278/294 (94.56%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTLIPHASSLGL NSHGKPSNF+PKLKS+LSF SASSVLKTT+ KPSRTLAP 
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPS 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 294

[Close]

BLAST of Lsi07G011300 vs. NCBI nr
Match: XP_023553095.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.1 bits (1359), Expect = 4.9e-146
Identity = 277/294 (94.22%), Postives = 286/294 (97.28%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPP 60
           MELLSRCSTLIPHASSLGL NSHGKPSNF PKLKS++SF SASSVLKTT+ KPSRTLAP 
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFHPKLKSSVSFPSASSVLKTTARKPSRTLAPS 60

Query: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120
           CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK
Sbjct: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           EAVEYGLIDGVIDKDSIIPL+PVPERVKASLNY EISKDP+KFL+PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 294

[Close]

BLAST of Lsi07G011300 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 371.3 bits (952), Expect = 7.1e-103
Identity = 212/299 (70.90%), Postives = 234/299 (78.26%), Query Frame = 0


Query: 1   MELLSRCSTLIPHASSLGLPNSHGKPSNFFPK-----LKSTLSFSSASSVLKTTSLKPSR 60
           M  LS  S+L P   S  L +S    S+ FPK     LK T      S  L+TTS  P R
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPT---KLISPPLRTTSPSPLR 60

Query: 61  TLAPPCSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA 120
                 +  +   QT ++A RGAE+D MGLLLRERIVFLG+SIDDFVADAI+SQLLLLDA
Sbjct: 61  F----ANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDA 120

Query: 121 QDSTKDIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRL 180
           +D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR 
Sbjct: 121 KDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRF 180

Query: 181 AMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDR 240
           AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNNVT II+  T   FE+V KDIDRDR
Sbjct: 181 AMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDR 240

Query: 241 YMSPIEAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 295
           YMSPIEAVEYGLIDGVID DSIIPL PVP+RVK  +NYEEISKDP KFLTP++PDDEIY
Sbjct: 241 YMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of Lsi07G011300 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 196.4 bits (498), Expect = 3.1e-50
Identity = 110/240 (45.83%), Postives = 153/240 (63.75%), Query Frame = 0


Query: 24  GKPSNF------FPKLKSTLSFSSASSVLKTTSLKPSRTLAPPCSV----LMTAPQTPDA 83
           GK  NF       PK        S+ S+ K     P +TL+    V    + +  Q+P  
Sbjct: 22  GKNLNFPIRNHRIPKTSKPFCVRSSMSLSK----PPRQTLSSNWDVSSFSIDSVAQSPSR 81

Query: 84  ARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSL 143
                E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS +DI LFINS GGS+
Sbjct: 82  LPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSI 141

Query: 144 SATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASG 203
           +A M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQPLG A G
Sbjct: 142 TAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGG 201

Query: 204 QAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVID 254
           +A ++ I+ RE+M++K  + +I S  TG P  +++ D DRD +++P EA EYGLID VID
Sbjct: 202 KATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257

[Close]

BLAST of Lsi07G011300 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 179.1 bits (453), Expect = 5.2e-45
Identity = 87/167 (52.10%), Postives = 124/167 (74.25%), Query Frame = 0


Query: 86  LLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAGGSLSATMAIYDVVQL 145
           L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI+D ++ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 146 VRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREI 205
           +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+HQPLGGA G   D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 206 MHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVI 253
           +H+K N+   ++  TG   EK+ +D DRD +MS  EA EYGLIDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of Lsi07G011300 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 158.7 bits (400), Expect = 7.2e-39
Identity = 78/188 (41.49%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 68  PQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFIN 127
           P  P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N
Sbjct: 83  PVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLN 142

Query: 128 SAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQP 187
             GGS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP
Sbjct: 143 CPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQP 202

Query: 188 LGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGL 247
             G  G   DV  Q  E +  +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+GL
Sbjct: 203 QTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGL 262

Query: 248 IDGVIDKD 256
           IDG+++ +
Sbjct: 263 IDGLLETE 270

[Close]

BLAST of Lsi07G011300 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-38
Identity = 89/245 (36.33%), Postives = 136/245 (55.51%), Query Frame = 0


Query: 27  SNFFPKLKSTLSFSSASSVLKTTSLKPSRTLAPPCSVLMTA----------------PQT 86
           S +   LK+ LS + + S +K  +  PS    P  ++L ++                P  
Sbjct: 44  SPYGDSLKAGLSSNVSGSPIKIDNKAPSSLPLPILNILKSSTVYFIFGVIEAKKGNPPVM 103

Query: 87  PDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSAG 146
           P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N  G
Sbjct: 104 PSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPG 163

Query: 147 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGG 206
           GS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G
Sbjct: 164 GSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTG 223

Query: 207 ASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDG 256
             G   DV  Q  E +  +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG
Sbjct: 224 CGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDG 283

The following BLAST results are available for this feature:

BLAST of Lsi07G011300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B60	1.0e-101	70.90	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t...	[more]
Q3ANI8	7.8e-54	54.36	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC...	[more]
Q3B0U1	1.7e-53	53.85	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC...	[more]
Q7V992	1.1e-52	55.08	ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (str...	[more]
O34125	2.5e-52	53.93	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str...	[more]

BLAST of Lsi07G011300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJF4	6.0e-150	96.60	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CWB9	8.7e-149	95.58	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1EC18	3.1e-146	94.22	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HNH6	3.8e-144	93.20	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0L3S1	1.6e-142	91.84	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of Lsi07G011300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876611.1	4.3e-150	96.60	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispi...	[more]
XP_008448589.1	1.2e-149	96.60	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
XP_022145352.1	1.8e-148	95.58	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica chara...	[more]
KAG7015794.1	7.5e-147	94.56	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyr...	[more]
XP_023553095.1	4.9e-146	94.22	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita ...	[more]

BLAST of Lsi07G011300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45390.1	7.1e-103	70.90	CLP protease P4	[more]
AT1G66670.1	3.1e-50	45.83	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	5.2e-45	52.10	nuclear encoded CLP protease 5	[more]
AT1G11750.1	7.2e-39	41.49	CLP protease proteolytic subunit 6	[more]
AT1G11750.2	2.1e-38	36.33	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 152..169 score: 50.56 coord: 173..192 score: 57.75 coord: 121..141 score: 54.88 coord: 81..96 score: 46.88 coord: 230..249 score: 56.38
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 66..255 score: 36.73835
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 81..251 e-value: 2.04695E-96 score: 279.326
None	No IPR available	GENE3D	3.90.226.10		coord: 62..257 e-value: 7.2E-69 score: 233.5
None	No IPR available	PANTHER	PTHR10381:SF24	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTIC	coord: 62..291
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 80..254 e-value: 1.7E-71 score: 239.9
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 62..291
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 174..187
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 80..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G011300.1	Lsi07G011300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity