![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lsi07G011000 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATTTAGCTTCTCATCACGTGCCTTTCTCACATGCCCAAATATTGCCTTCCTCTTCTATAAATCCATTTCTCCATTTTTTTTCCTTTCTCTTCTTCTAATTTCCTCTAACACAAAATCTTCTTCTCTTCTCCCATGGCTTCCATTTCTCCTTCTCTTCTTTCTATCTTGCTTTTCTTCCCTTTCTTTTCAGGTATATTTTCCTTCCTTTTATCTTTTGATTTGTTATTATTTTTTTCAAACGTAGAACGACAAAAGAAGAGACTGACAATTATACTATAAAAAAACTTTCATTTTCTATTGTTTTCATTGATGTTTTCTTCTCCTTTTTGAAGTATATATTTTTTTTTAAATTAGGAGGAGAGACGACCCTCGTTGTTGTTTTGGGGGAAGAATAATATACTTTTTTTTCTCATTAGATAGTAGAATTTTTTTCGTAATTTCTCTATTTTAAAATATTGATTAACAAAAAGTATTTTTTTTTTAATTAAGAAATTATATAAAAGTAGTTAATTGAAAAGGTTGAATTCTTTGGACTTGTTTTTTCAATCTTTCCTTTCAAAATTTTAATTTCAAGATTGTAAATCAAATGCATACAAAGTTCTTAACTTATACATAAAATTGATATTATAGATTTTGTACTATAAATTAGCCAATAGAAATCTCTATCTTTTAGGTTAATTTATAAACTTATATGGTAATGATTTTGTGTATAAATTTCAACTTTTTAAACAAAGGATATTACGAAATAAAAGTATTAATTAGCAAAAATTTTGCTCCTTTCCTTTTTCGTAATTTTTTTTTTTGCTTCATCCATCCTTTTTTTTAATTTTTTTTAAAGCAAAGAAATTAATTAATTTATTTATTTACAGGTGTAAATTCAGCGACTTTCACCATTTTAAATCAGTGTGATTACACAGTGTGGCCGGGAGTTTTGTCCGGCGCCGGCACATCACAGCTCTCCACCACCGGCTTCGTCCTGCAGACAGGACAGTCCAACGCCATCACCATGCCGCCGGCGTGGTCAGGCCGTATTTGGGGCCGCACTTATTGCTCTCAAGATGCCGCCGGCAGATTCTCCTGTGCCACTGCCGACTGCGGCTCTGGCACGGTCGAATGTAATGGTGCCGGTGCTACACCGCCCGCCACCCTTGCCGAGTTCACTCTCAATGGTGCAGGCGGGCTCGATTTCTATGATGTTAGCCTCGTCGATGGCTATAATGTGCCTATGTTAATTACCCCACAAGATGGAACAGGTAACTTTCTAGATATAATACGAATAAAAATACCAAGGTTTCAATTTTATAAATATTTTAAAAAGACAATGGATATACTTATTAGACTGATAGTTTTTAAACGTAAAATATGAAAGTTGATTCATTATTTTGGTTCACGTAATTTCAATTTTTATCAGTTTTTGATTTCTAAATTTCCAATTTTTTTCTATTTATGTTATTGTATAGACACGACGTCCAACTTTTATCGACATTTTTAAAAATTCTAACACAGTTTTAATTCACTATAATGAAAACCAAAAGAATAAATATTGATAGCCGATATTTTAAATACTTGAGAGAGCAGGTGGGGGCAATTGCACGACGATTGGATGTGCGACGGATTTAAATAGCGAATGTCCAACAGAATTAAGAGTGGTAGCGAGCAACGCAGGTGGGCGAAGCGTAGCGTGTAAGAGTGCATGTGGAGCATTTGGTGAGGCCCAATATTGCTGTAGTGGCGATTATGGGAATCCAACCACTTGTCGACCTACGTCCTACTCAGAGTTCTTTAAGTCGGCATGTCCGCAAGCTTATAGTTATGCCTATGATGACGGAACTAGCACATTCACTTGCAATGGTGCCAATTACCTCATCACTTTCTGTCCTTTTCTTTCAACTAGGTGCGTCAATTTTTTTTTTAATTTCATTCATTTTCACTATGTCAACTTCATTGTCACGATCAGACACTTATAAAAAAATATACAACAAAATTAATTGGTATGATTTAATCAACCATAAAAAAAAATTTGAAACTAAACCAAAGATGCCCATTATAAAATGAAACCTTTAAAATTATGGCTACCAAAAATTTGTAAGTAGTAATTTTACCTATCAAAAGTTTTAATATTTTATAGATTTACTTTCAATTTTATGATTTTATTTTCCCCTTTTTTTCTTCTTCATTATTTTCAATCACAACATCAATAATTATGCAGTATGGGCCTAATATATGGGGATATGTCATTTTCTTAGTTTATTTTTTAATCTTATCATCTTTTATATACAAATTAAATGTGAAATCTAGAATAGTTCAAAAAAGAATTATTTTTCTATAACTTTTTTTAATTATTCTAATCTATTTATAGAACTATTTCTTTTTTATAATGATTATTATAGAGATTAACTCCAAAACTCAAAACTCAAAATCTATAATTATTGATATTTTAGATATGAAAGCAAGCTGTGAAGTTAGTCTCTTGCACGAACAAAATTCTTTTATTTATTTATTATTATTTTTATTTTTTGAGTTTGGATCAAAATTCTAGTTGACCTAAATCCTTTTGGTTTCATATGAAAAGTGTATTATTTGATTTTATTTGAATTTTCTTCATTTTCCACCGTCCATTTTTTTAAACAAATTCAAGGTGTCAATTTTTTTTTCCTTGAGACCCATCATCTTTGAGATAGTGATATAAGTTTTAATTTTATCCTTGAATTTTCTAGAAAAATCAACAAATAATTGGAGCCAACTCATTCATGTGTAACATGATTCAGAATAAAATGTTATTATTTTGAAAAATAATTTCCACACACATACCTATTATAAAGTTGAATTGGTTAACTAAATAGTTTTGAATGATTATCTTTATCTCCCATTGTATTAAAAAAAAGTTAGCATAATCTCATAAATTCTTGCCGTTAGCACTTTCAAATGTTAACATAACATGCTAATTCAACTAAAAAATTAGGATTATCATGTGACTCAAGAGAGTAAACAAGTTCTTTGGGCTCATCTACAATTATTCTATATGATAGGCGGCTTACTATCTTATAAGTTACGGTAATTGTAATGACTAGCAATTTTATGAATAATAACCAAATGTATAGCAACATTTTAAAAAAATTGCAAATATAGCAAAGTCTATAAGTGATAGACTTATCGCTAATAGTGATAGACCACCTAAACCATAAAAACCATAAAAGTTTATCAGCGATAGAATTCTATCACTGATAGACTTTGCTAAATTTGCAATTTTTTAAAAGATATTGCTATTATGCTAATACTCTGAATCTAGTTGCTATAAGTGCAACTTTCCCTATAGGGTATGTCATATGTTATCGATTGTTGTACTAGATTCATCATTTGTAAGTTCATTCAATGTCATATATTAACATTTTATGTTAAATTATAAATTTGGTCCTATAATTTGGAGAAAACTTTAGAATTTAGTTCATATGGTTTATAATTACAATTTAGTCCATGTGGTTTGATAAAACCTTCTTAAATAGTCCCTACAGTAGAAATTGTTTATGGAAATTAATTTATCAAACCATATGGACTATTTATGAAGTTTTATCCCACCGTAGAGACTAAATTCTAACTTTAAAATCATAGGGACTAAACAGTAATTTTCTCTAAATCATAAGGACCAAATTACAATTTAACCTAACACTTATAATAACAATGTTTTTTTTCTTTAAATTCATTAACATGTGTGAAGGAAGAGAATTAAAAATTAAGTCGTTTTTATAAAGCTTAGCGTTTTTTTTTTTAAGAGAAGAAGTTAGGTCAATAAATCGGAAAAGATTTTGGATTTTGATTGAAATTTTGTTGGCGTGAATATGCAGTGTGAAATCATCAAACGGGCAGTACCCACGGGCAGTGGACATCTCAAGAGCCGAGCATTCGGGCAGACCGTTAACGTCAGTAGCCGTTATCACCACCGTGACGGCAGCTCTATGTCGGCGATTTTTGCGTCTCTTTTAAACCTTCACCACCAGCCATTGGGCCCATCTTCACAAGTGGGCCCTCGGCCCATATTGGGCCCATATTACATGGAATTTTAGATAGATTCATGCACAATCTTTTTATTTTAGTTTTTGTTGTATATTATTAGATTTTGAGGGTTTTTTTTTCTTTTTAATTTTGGGAAAAATTCCAAAATTTTGTATCAATACAATATTGGGCTGTGCCTTTTCTAGAGGATGGATGAATTTTTGTTTGTACACTTAAAAGCATAAATGGAAGGGGCAATGAAGATGGGAATTTTAC ATATTTAGCTTCTCATCACGTGCCTTTCTCACATGCCCAAATATTGCCTTCCTCTTCTATAAATCCATTTCTCCATTTTTTTTCCTTTCTCTTCTTCTAATTTCCTCTAACACAAAATCTTCTTCTCTTCTCCCATGGCTTCCATTTCTCCTTCTCTTCTTTCTATCTTGCTTTTCTTCCCTTTCTTTTCAGGTGTAAATTCAGCGACTTTCACCATTTTAAATCAGTGTGATTACACAGTGTGGCCGGGAGTTTTGTCCGGCGCCGGCACATCACAGCTCTCCACCACCGGCTTCGTCCTGCAGACAGGACAGTCCAACGCCATCACCATGCCGCCGGCGTGGTCAGGCCGTATTTGGGGCCGCACTTATTGCTCTCAAGATGCCGCCGGCAGATTCTCCTGTGCCACTGCCGACTGCGGCTCTGGCACGGTCGAATGTAATGGTGCCGGTGCTACACCGCCCGCCACCCTTGCCGAGTTCACTCTCAATGGTGCAGGCGGGCTCGATTTCTATGATGTTAGCCTCGTCGATGGCTATAATGTGCCTATGTTAATTACCCCACAAGATGGAACAGGTGGGGGCAATTGCACGACGATTGGATGTGCGACGGATTTAAATAGCGAATGTCCAACAGAATTAAGAGTGGTAGCGAGCAACGCAGGTGGGCGAAGCGTAGCGTGTAAGAGTGCATGTGGAGCATTTGGTGAGGCCCAATATTGCTGTAGTGGCGATTATGGGAATCCAACCACTTGTCGACCTACGTCCTACTCAGAGTTCTTTAAGTCGGCATGTCCGCAAGCTTATAGTTATGCCTATGATGACGGAACTAGCACATTCACTTGCAATGGTGCCAATTACCTCATCACTTTCTGTCCTTTTCTTTCAACTAGTGTGAAATCATCAAACGGGCAGTACCCACGGGCAGTGGACATCTCAAGAGCCGAGCATTCGGGCAGACCGTTAACGTCAGTAGCCGTTATCACCACCGTGACGGCAGCTCTATGTCGGCGATTTTTGCGTCTCTTTTAAACCTTCACCACCAGCCATTGGGCCCATCTTCACAAGTGGGCCCTCGGCCCATATTGGGCCCATATTACATGGAATTTTAGATAGATTCATGCACAATCTTTTTATTTTAGTTTTTGTTGTATATTATTAGATTTTGAGGGTTTTTTTTTCTTTTTAATTTTGGGAAAAATTCCAAAATTTTGTATCAATACAATATTGGGCTGTGCCTTTTCTAGAGGATGGATGAATTTTTGTTTGTACACTTAAAAGCATAAATGGAAGGGGCAATGAAGATGGGAATTTTAC ATGGCTTCCATTTCTCCTTCTCTTCTTTCTATCTTGCTTTTCTTCCCTTTCTTTTCAGGTGTAAATTCAGCGACTTTCACCATTTTAAATCAGTGTGATTACACAGTGTGGCCGGGAGTTTTGTCCGGCGCCGGCACATCACAGCTCTCCACCACCGGCTTCGTCCTGCAGACAGGACAGTCCAACGCCATCACCATGCCGCCGGCGTGGTCAGGCCGTATTTGGGGCCGCACTTATTGCTCTCAAGATGCCGCCGGCAGATTCTCCTGTGCCACTGCCGACTGCGGCTCTGGCACGGTCGAATGTAATGGTGCCGGTGCTACACCGCCCGCCACCCTTGCCGAGTTCACTCTCAATGGTGCAGGCGGGCTCGATTTCTATGATGTTAGCCTCGTCGATGGCTATAATGTGCCTATGTTAATTACCCCACAAGATGGAACAGGTGGGGGCAATTGCACGACGATTGGATGTGCGACGGATTTAAATAGCGAATGTCCAACAGAATTAAGAGTGGTAGCGAGCAACGCAGGTGGGCGAAGCGTAGCGTGTAAGAGTGCATGTGGAGCATTTGGTGAGGCCCAATATTGCTGTAGTGGCGATTATGGGAATCCAACCACTTGTCGACCTACGTCCTACTCAGAGTTCTTTAAGTCGGCATGTCCGCAAGCTTATAGTTATGCCTATGATGACGGAACTAGCACATTCACTTGCAATGGTGCCAATTACCTCATCACTTTCTGTCCTTTTCTTTCAACTAGTGTGAAATCATCAAACGGGCAGTACCCACGGGCAGTGGACATCTCAAGAGCCGAGCATTCGGGCAGACCGTTAACGTCAGTAGCCGTTATCACCACCGTGACGGCAGCTCTATGTCGGCGATTTTTGCGTCTCTTTTAA MASISPSLLSILLFFPFFSGVNSATFTILNQCDYTVWPGVLSGAGTSQLSTTGFVLQTGQSNAITMPPAWSGRIWGRTYCSQDAAGRFSCATADCGSGTVECNGAGATPPATLAEFTLNGAGGLDFYDVSLVDGYNVPMLITPQDGTGGGNCTTIGCATDLNSECPTELRVVASNAGGRSVACKSACGAFGEAQYCCSGDYGNPTTCRPTSYSEFFKSACPQAYSYAYDDGTSTFTCNGANYLITFCPFLSTSVKSSNGQYPRAVDISRAEHSGRPLTSVAVITTVTAALCRRFLRLF Homology
BLAST of Lsi07G011000 vs. ExPASy Swiss-Prot
Match: Q9FF29 (PR5-like receptor kinase OS=Arabidopsis thaliana OX=3702 GN=PR5K PE=1 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.5e-73 Identity = 133/260 (51.15%), Postives = 175/260 (67.31%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy Swiss-Prot
Match: A0A1P8B554 (Thaumatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=2 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 2.6e-73 Identity = 143/255 (56.08%), Postives = 171/255 (67.06%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy Swiss-Prot
Match: Q9FSG7 (Thaumatin-like protein 1a OS=Malus domestica OX=3750 GN=TL1 PE=1 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 9.9e-73 Identity = 139/249 (55.82%), Postives = 166/249 (66.67%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy Swiss-Prot
Match: O80327 (Thaumatin-like protein 1 OS=Pyrus pyrifolia OX=3767 GN=TL1 PE=1 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 2.2e-72 Identity = 131/239 (54.81%), Postives = 169/239 (70.71%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy Swiss-Prot
Match: P83332 (Thaumatin-like protein 1 OS=Prunus persica OX=3760 PE=2 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.9e-72 Identity = 135/233 (57.94%), Postives = 160/233 (68.67%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy TrEMBL
Match: A0A1S3BJY9 (thaumatin-like protein 1b OS=Cucumis melo OX=3656 GN=LOC103490689 PE=3 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 2.0e-145 Identity = 265/301 (88.04%), Postives = 277/301 (92.03%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy TrEMBL
Match: A0A5A7UEL6 (Thaumatin-like protein 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00670 PE=3 SV=1) HSP 1 Score: 509.2 bits (1310), Expect = 1.1e-140 Identity = 250/282 (88.65%), Postives = 261/282 (92.55%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy TrEMBL
Match: A0A6J1E8W0 (thaumatin-like protein 1b OS=Cucurbita moschata OX=3662 GN=LOC111430957 PE=3 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 9.7e-140 Identity = 252/297 (84.85%), Postives = 267/297 (89.90%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy TrEMBL
Match: A0A6J1HN86 (thaumatin-like protein 1b isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465187 PE=3 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 3.5e-137 Identity = 249/297 (83.84%), Postives = 266/297 (89.56%), Query Frame = 0
BLAST of Lsi07G011000 vs. ExPASy TrEMBL
Match: A0A1S3BJE5 (thaumatin-like protein 1b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490715 PE=3 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 2.9e-128 Identity = 237/300 (79.00%), Postives = 253/300 (84.33%), Query Frame = 0
BLAST of Lsi07G011000 vs. NCBI nr
Match: XP_038876617.1 (thaumatin-like protein 1b [Benincasa hispida]) HSP 1 Score: 560.1 bits (1442), Expect = 1.2e-155 Identity = 273/298 (91.61%), Postives = 284/298 (95.30%), Query Frame = 0
BLAST of Lsi07G011000 vs. NCBI nr
Match: XP_031737962.1 (pathogenesis-related thaumatin-like protein 3.5 [Cucumis sativus] >KAE8650002.1 hypothetical protein Csa_009485 [Cucumis sativus]) HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147 Identity = 265/300 (88.33%), Postives = 277/300 (92.33%), Query Frame = 0
BLAST of Lsi07G011000 vs. NCBI nr
Match: XP_008448547.2 (PREDICTED: thaumatin-like protein 1b [Cucumis melo]) HSP 1 Score: 525.0 bits (1351), Expect = 4.2e-145 Identity = 265/301 (88.04%), Postives = 277/301 (92.03%), Query Frame = 0
BLAST of Lsi07G011000 vs. NCBI nr
Match: KAA0052957.1 (thaumatin-like protein 1b [Cucumis melo var. makuwa] >TYK11413.1 thaumatin-like protein 1b [Cucumis melo var. makuwa]) HSP 1 Score: 509.2 bits (1310), Expect = 2.4e-140 Identity = 250/282 (88.65%), Postives = 261/282 (92.55%), Query Frame = 0
BLAST of Lsi07G011000 vs. NCBI nr
Match: XP_022923188.1 (thaumatin-like protein 1b [Cucurbita moschata]) HSP 1 Score: 506.1 bits (1302), Expect = 2.0e-139 Identity = 252/297 (84.85%), Postives = 267/297 (89.90%), Query Frame = 0
BLAST of Lsi07G011000 vs. TAIR 10
Match: AT4G36010.1 (Pathogenesis-related thaumatin superfamily protein ) HSP 1 Score: 353.2 bits (905), Expect = 2.0e-97 Identity = 180/286 (62.94%), Postives = 209/286 (73.08%), Query Frame = 0
BLAST of Lsi07G011000 vs. TAIR 10
Match: AT4G36010.2 (Pathogenesis-related thaumatin superfamily protein ) HSP 1 Score: 353.2 bits (905), Expect = 2.0e-97 Identity = 180/286 (62.94%), Postives = 209/286 (73.08%), Query Frame = 0
BLAST of Lsi07G011000 vs. TAIR 10
Match: AT1G20030.2 (Pathogenesis-related thaumatin superfamily protein ) HSP 1 Score: 325.5 bits (833), Expect = 4.5e-89 Identity = 156/245 (63.67%), Postives = 191/245 (77.96%), Query Frame = 0
BLAST of Lsi07G011000 vs. TAIR 10
Match: AT1G75800.1 (Pathogenesis-related thaumatin superfamily protein ) HSP 1 Score: 322.4 bits (825), Expect = 3.8e-88 Identity = 155/257 (60.31%), Postives = 193/257 (75.10%), Query Frame = 0
BLAST of Lsi07G011000 vs. TAIR 10
Match: AT2G17860.1 (Pathogenesis-related thaumatin superfamily protein ) HSP 1 Score: 321.2 bits (822), Expect = 8.5e-88 Identity = 156/250 (62.40%), Postives = 188/250 (75.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|