Lsi07G010060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi07G010060
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein
Locationchr07: 14525086 .. 14528762 (+)
RNA-Seq ExpressionLsi07G010060
SyntenyLsi07G010060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAATGTGTATGAAGCTGGGGAACCTATGAGTGTTTCTTCTGCTACTAGAAACGTGATTTTTTCATTCCATGTTTCAAATTTTATTTATTATTTATTTCAGTTTATGACATTTTCTCTTGTGGAACATATTTTTCCCCTCTTGGTTGTTATTGCTGTTTATGAAGTTTTGAAATTGTCTCACTGGATGACTATTTGGTTTTAGGTTCTTGAAAATTATAATTATTGATTTCTATGTTTTTTTGGGAGTGTTTTTAAAAATTCAAGAAAAATTCTAAAAACTCGTTTTTGTTCTTATAACTTTTGCTAAAATTCAAATAGGAAAGATGAAAACTTTGATTATGAAATTATGAGAAAAACAAGCACAATTTTTAAAAACGAAGAAAAATTAAAAACCATATAATTACAAAACCATGAAGATATTAACAAATCATGAAATTGATTTATTCAATCCGAGAAAACTTAAGCAAATTACAATAGTGTCTCTCCCTTAAATGCTAAGAAGCACATATACGGATACGAGACATGGATATGAAACGACACTGACATTGCGACATGTCATTTTTTAAATATATTAGGTTGATTCTTTTATATGCTTAAAAAAATTAGTTTGATGTATTTCACACTTAAATTTTATTATTATTGTTATGTATGTGTCTTTTTAATCTATTCAACAAGTGTTTTATGCATGTCTAACAAATTAGTTGCACTAACAAGTGTCCGTGTCCAACAAGAGTCGGAGTGTCCAAGTATCTAACATGTGTCAGACACGGACATAGTAGCTAAACTAAAGGGACCACTAAACTAAAGGGTCCCTGTTCTCAGCTTAAATGTAAAGAGGTTAATAGACATAACTACCCTCATTAACAAATAACAAACTGAAACAAATAAACCAAAACGATTATAGAAATAGCAATAACAATGGTATCCTTAATACTTTCCCTCAAGGTGGAGCGTAAACATTCAAAATGCTCAGCTTGGATAAAGCAGCACTCAAACAGGCGTAGCGAGAGCCTTTGTGCATGCATTGGCCAGCTGAAGTTGTGATTGTATGGGAAGAATTTTAAGGAAACCATCCAAAACTTTATCACCAACAAAGTGACAATCAATTTCAATAGACTTCGTCTGCTCATGAAAAGATAGATTAGAGACAATTAAGATGGCTACCTAGTTATCACAATAAACAACCGCAGGCATGGGTGAAGGTACATGGAGATTAGAAAGGAACTGAGAAAGCCAAACCAACTCACTGGAGATACATGCCAATGCACGGTACTTGGCCTCCACAGAAGATTGTGTGACACTGCAGTGGGCTGTTTCTTAGATTTCCAAGAGACCAAGGATTCCTCTAAAAGGACGCAAAACCCAATAATCGAGCGACTGGTATCTGGGAAAGAACCCCAATCAGCATCTAGAGAAGCTCTAAGCTGGAAAGTAGTAGAAGCTCGTAACAAAATTGCTTGGCCAGGGGAACCCTTTAAGTAACAAAGTAACTGTTATACAGCTTCCAAATTACCAGATTGAGGGTGCTTAAGAAACTGACTGAGGTGATGAACTGAATATGAAATGTCTGACTATATATTCATCGAGGGTCCTTAATAAATATTTAACTGATTAGTGTTGATCAGAATTAGTAGATTAAAGTACTCAATGTTTTAGCTATATGGTTCTCAAGAATCTTCCTTATGATGACATTGAAATAATCACTGCAGTGTTATAATGGAAACTAGCATTGTTCTTTTAAACATTCCTTAAAATTTTTCATAATATATATACAAGATGTACTCAATGAGTAGCATGCAGCCTGCTACAGAAGTATGGAGATCATGGTTTTAAGACTTCTGTGTTAGCATTTGTTCACTGTTGAACAACTTTGGCCTTTTGCCGTGTGTATAGTTTGTAATACATGAATAATCTACTTGGATTTTCTCAGATTGCACGTGGTAGTTTCTCTTTTCTATTTAGTTTTATATTGTTGCTAAAGTGAGCTTAACTCAACGGTAATTGACATGACCTTCCTCCTTAGAGGTCGAAGGTTCGATCCTCCATCCTTGCTGTTGTTGTATTAAAAAAGTTTAATTTTTCTTTTTTCTTCTTTTAAAATGAAAGATTGAGGTAATTTTTCCTTGAAACCTGTTCTATGGAGAATATACATGCCTACCACTTAACTTCCAAATATAATTTATATGATCTTTTATGTATTATTTTTTACTTTCCACCAGAATGTGTGCCGACTCCCTTGTGAAAATTTCCATCACAGTTATGACTGTCTTCATTGTGCTTATGCGTTGTTCTGACTGGTTAATATTGTCTTGTTGCTGCAGGATCAAATCTTTACTCCCTTGTTATACTTATATTTGGAAAATGACATGGGAAGAAATTTTGAAGGTGATTTTCCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATTGCTCGAGATGATTACTTCTGGAAATGCTTGTGTGCGAAGAAGTGGCCTTCAACCTGCAAAACGCCCAATCCTCCAACCGATACCTACTACAAACTATATCAAAATTTTTACAAACGCCCCAATAATCGACATCTTCTCCCTCCTCGACTCTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGTGGTTTCAGGTCAAGTCCTCCAGAATGGTATGAAGAACCCACCACCTGGTACTAGTAATGTGCTTAGTTATCACCTGGAAGTCCCTGAGTTCAAGATGACACTCCCTGTTGAGCCAAGGTTCTCAATTCCTATATCCCATAGCGTGAGTGTATCCGTGCTTGGGAGACGCAAGGATTCCAATAAAGTTGCTCGGATAGTCAATAAATCTCTATTTGATTATATTGATCGAACGTCGTACAGGGCATTGGCATTTGACTACCTTGATTTTTCACCTCTCCACCCGTTTGTGTCTGGAATCCGAGCATGGATCTCATTGCTTTTCATGGACGATGGAAATGATGGTGTAATTGATGTATTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGAAGGGCTCACATCTTCTGGAAAAGAAAGTTGGAGGGCTAAGAGGAAAGGCCATGTGGGGGTTGCGCCAACTTTGAAAAACTTTCACATCTTGCTTCAAAATATCAATCATAAACTGTTCATCTTCACTGTACATAATTTTCCAATTCATTTCATCAATAAATATGAACAAAGTTCTTTTTATTAACTCGTATTTTTTTCCACAGTTTATGTGAGTCACCTGCAATCTTGTTCCAGACTTATGAGCCTTTTTTTTCTTTCTATTTTTTACCTCGACCTTGCTATGTTTAGTTTATGATAGGCCTTAGCCTTAACACTTTATTTATCAAAGAACGGGGAAGAATTTAAGAGCTTCCCCTTCCTCTCCTCAAATTTTCCTCAGAAAACAATTACAAATTACTTCCCTCACAAGATCCCCTAACCCTCTCTCTTTACCCTTATATAAAGGCAAAATCTCTCCCTAACAAATCCTAACAACCCGGGCCCACTAACTACTAACAAATCCTAACAACCGGGCCCACTAACTACTAACAAATCCTAACAACCTGGCCCACTACTAACTACT

mRNA sequence

ATGCGAATGATCAAATCTTTACTCCCTTGTTATACTTATATTTGGAAAATGACATGGGAAGAAATTTTGAAGGTGATTTTCCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATTGCTCGAGATGATTACTTCTGGAAATGCTTGTGTGCGAAGAAGTGGCCTTCAACCTGCAAAACGCCCAATCCTCCAACCGATACCTACTACAAACTATATCAAAATTTTTACAAACGCCCCAATAATCGACATCTTCTCCCTCCTCGACTCTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGTGGTTTCAGGTCAAGTCCTCCAGAATGGTATGAAGAACCCACCACCTGGTACTAGTAATGTGCTTAGTTATCACCTGGAAGTCCCTGAGTTCAAGATGACACTCCCTGTTGAGCCAAGGTTCTCAATTCCTATATCCCATAGCGTGAGTGTATCCGTGCTTGGGAGACGCAAGGATTCCAATAAAGTTGCTCGGATAGTCAATAAATCTCTATTTGATTATATTGATCGAACGTCGTACAGGGCATTGGCATTTGACTACCTTGATTTTTCACCTCTCCACCCGTTTGTGTCTGGAATCCGAGCATGGATCTCATTGCTTTTCATGGACGATGGAAATGATGGTGTAATTGATGTATTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGAAGGGCTCACATCTTCTGGAAAAGAAAGTTGGAGGGCTAAGAGGAAAGGCCATGTGGGGGTTGCGCCAACTTTGAAAAACTTTCACATCTTGCTTCAAAATATCAATCATAAACTGTTCATCTTCACTGTACATAATTTTCCAATTCATTTCATCAATAAATATGAACAAAGTTCTTTTTATTAACTCGTATTTTTTTCCACAGTTTATGTGAGTCACCTGCAATCTTGTTCCAGACTTATGAGCCTTTTTTTTCTTTCTATTTTTTACCTCGACCTTGCTATGTTTAGTTTATGATAGGCCTTAGCCTTAACACTTTATTTATCAAAGAACGGGGAAGAATTTAAGAGCTTCCCCTTCCTCTCCTCAAATTTTCCTCAGAAAACAATTACAAATTACTTCCCTCACAAGATCCCCTAACCCTCTCTCTTTACCCTTATATAAAGGCAAAATCTCTCCCTAACAAATCCTAACAACCCGGGCCCACTAACTACTAACAAATCCTAACAACCGGGCCCACTAACTACTAACAAATCCTAACAACCTGGCCCACTACTAACTACT

Coding sequence (CDS)

ATGCGAATGATCAAATCTTTACTCCCTTGTTATACTTATATTTGGAAAATGACATGGGAAGAAATTTTGAAGGTGATTTTCCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATTGCTCGAGATGATTACTTCTGGAAATGCTTGTGTGCGAAGAAGTGGCCTTCAACCTGCAAAACGCCCAATCCTCCAACCGATACCTACTACAAACTATATCAAAATTTTTACAAACGCCCCAATAATCGACATCTTCTCCCTCCTCGACTCTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGTGGTTTCAGGTCAAGTCCTCCAGAATGGTATGAAGAACCCACCACCTGGTACTAGTAATGTGCTTAGTTATCACCTGGAAGTCCCTGAGTTCAAGATGACACTCCCTGTTGAGCCAAGGTTCTCAATTCCTATATCCCATAGCGTGAGTGTATCCGTGCTTGGGAGACGCAAGGATTCCAATAAAGTTGCTCGGATAGTCAATAAATCTCTATTTGATTATATTGATCGAACGTCGTACAGGGCATTGGCATTTGACTACCTTGATTTTTCACCTCTCCACCCGTTTGTGTCTGGAATCCGAGCATGGATCTCATTGCTTTTCATGGACGATGGAAATGATGGTGTAATTGATGTATTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGA

Protein sequence

MRMIKSLLPCYTYIWKMTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDTYYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPGTSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Homology
[Close]
BLAST of Lsi07G010060 vs. ExPASy Swiss-Prot
Match: Q9FL82 (F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.2e-100
Identity = 171/249 (68.67%), Postives = 207/249 (83.13%), Query Frame = 0 

Query: 20  EEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDTYYK 79
           EE+LK +FPLLEG DLASCM VCKQWRDIARDD++WKC CAKKWPS CK   PPT+TYYK
Sbjct: 4   EEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYK 63

Query: 80  LYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPGTSN 139
           +YQ F KR  NR L PPRLSF++LEFFIDIWSE+RL+FS ++ G  L+NG++  P G SN
Sbjct: 64  MYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISN 123

Query: 140 VLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDRTSY 199
           VL  HL  P++KM +P EPRF+IP++ SVSVSVL  R DS+KVARI+N+S+FDYIDR+SY
Sbjct: 124 VLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSY 183

Query: 200 RALAFDYLDFSPLHPFVSGIRAWISLLFM---DDGNDGVIDVFGIVMDFCDAANTKDEVL 259
           RALAF+YLD SP +PF+SGIRAWISLLFM   D  +DG++DVFGI +DF D A+TK+EVL
Sbjct: 184 RALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEVL 243

Query: 260 WLLDLLDWK 266
           WLLD+LDWK
Sbjct: 244 WLLDMLDWK 252

[Close]
BLAST of Lsi07G010060 vs. ExPASy TrEMBL
Match: A0A1S3BL55 (F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.0e-137
Identity = 233/249 (93.57%), Postives = 242/249 (97.19%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           MTWEE+LKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKT +PPTDT
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YYKLY+NFYKRPNNR LLPPRLSFDDLEFFIDIWSEDRLIFSE VSG++LQNGMK+PPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           TSNVLSYHLEVPEFKMTLPVEPRFSIPIS++VS SVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]
BLAST of Lsi07G010060 vs. ExPASy TrEMBL
Match: A0A5A7TI25 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00800 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.0e-137
Identity = 233/249 (93.57%), Postives = 242/249 (97.19%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           MTWEE+LKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKT +PPTDT
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YYKLY+NFYKRPNNR LLPPRLSFDDLEFFIDIWSEDRLIFSE VSG++LQNGMK+PPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           TSNVLSYHLEVPEFKMTLPVEPRFSIPIS++VS SVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]
BLAST of Lsi07G010060 vs. ExPASy TrEMBL
Match: A0A6J1KTX3 (F-box protein At5g39250-like OS=Cucurbita maxima OX=3661 GN=LOC111498169 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.7e-133
Identity = 228/249 (91.57%), Postives = 241/249 (96.79%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           M WEEILKVIFPLLEGVDLASCMAVCKQWRDIARDD+FWKCLCAKKWPSTCK P+PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YYKLYQNFYKRPNNR LLPPRLSFDDLEFFIDIWSEDRLIFSEVV+GQVLQ+GMK PPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           TSNV++YHLE PEFKMTLPV+PRFSIPISH+VSVSVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG+IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]
BLAST of Lsi07G010060 vs. ExPASy TrEMBL
Match: A0A0A0L6S1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017250 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.5e-133
Identity = 228/249 (91.57%), Postives = 237/249 (95.18%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAKKWPSTCKT +PPTDT
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YYKLY+NFYKRPNNR LLPPRLSFDDLEFFIDIWSEDRLIFSEVVSG + QNGMKNPPP 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           T N+LSYHLEVPEFKMTL VEPRFSIPIS++VS SVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYRALAFDYLDFSP HPFVSGIRAWISLLFMDDG+DG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]
BLAST of Lsi07G010060 vs. ExPASy TrEMBL
Match: A0A6J1H6B9 (F-box protein At5g39250 OS=Cucurbita moschata OX=3662 GN=LOC111460859 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 227/249 (91.16%), Postives = 240/249 (96.39%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           M WEEILKVIFPLLEGVDLASCM VCKQWRDIARDD+FWKCLCAKKWPSTCK P+PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMLVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YYKLYQNFYKRPNNR LLPPRLSFDDLEFFIDIWSEDRLIFSEVV+GQVLQ+GMK PPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           TSNV++YHLE PEFKMTLPV+PRFSIPISH+VSVSVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG+IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]
BLAST of Lsi07G010060 vs. NCBI nr
Match: XP_038883374.1 (F-box protein At5g39250 isoform X1 [Benincasa hispida] >XP_038883382.1 F-box protein At5g39250 isoform X1 [Benincasa hispida])

HSP 1 Score: 521.5 bits (1342), Expect = 4.1e-144
Identity = 247/262 (94.27%), Postives = 253/262 (96.56%), Query Frame = 0 

Query: 4   IKSLLPCYTYIWKMTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKW 63
           IKS LPCY  IWKM WEE+LKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAK+W
Sbjct: 6   IKSSLPCYISIWKMIWEEVLKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKRW 65

Query: 64  PSTCKTPNPPTDTYYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSG 123
           PSTCKTPNPPTDTYY+LY+NFYKRPNNR LLPPRLSFD LEFFIDIWSEDRLIFSEVVSG
Sbjct: 66  PSTCKTPNPPTDTYYELYRNFYKRPNNRRLLPPRLSFDVLEFFIDIWSEDRLIFSEVVSG 125

Query: 124 QVLQNGMKNPPPGTSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVA 183
           QVLQNGMKNPPPGT NVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVL  RKDSNKVA
Sbjct: 126 QVLQNGMKNPPPGTINVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVGRKDSNKVA 185

Query: 184 RIVNKSLFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVM 243
           RIVNKS+FDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVM
Sbjct: 186 RIVNKSVFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVM 245

Query: 244 DFCDAANTKDEVLWLLDLLDWK 266
           DFCDAANTKDEVLWLLDLLDWK
Sbjct: 246 DFCDAANTKDEVLWLLDLLDWK 267

[Close]
BLAST of Lsi07G010060 vs. NCBI nr
Match: XP_038883395.1 (F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883403.1 F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883411.1 F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883415.1 F-box protein At5g39250 isoform X2 [Benincasa hispida])

HSP 1 Score: 501.1 bits (1289), Expect = 5.7e-138
Identity = 237/249 (95.18%), Postives = 243/249 (97.59%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           M WEE+LKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAK+WPSTCKTPNPPTDT
Sbjct: 1   MIWEEVLKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKRWPSTCKTPNPPTDT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YY+LY+NFYKRPNNR LLPPRLSFD LEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG
Sbjct: 61  YYELYRNFYKRPNNRRLLPPRLSFDVLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           T NVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TINVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]
BLAST of Lsi07G010060 vs. NCBI nr
Match: XP_008448789.1 (PREDICTED: F-box protein At5g39250 [Cucumis melo] >XP_008448790.1 PREDICTED: F-box protein At5g39250 [Cucumis melo] >KAA0041055.1 F-box protein [Cucumis melo var. makuwa] >TYK12065.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 496.1 bits (1276), Expect = 1.8e-136
Identity = 233/249 (93.57%), Postives = 242/249 (97.19%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           MTWEE+LKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKT +PPTDT
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YYKLY+NFYKRPNNR LLPPRLSFDDLEFFIDIWSEDRLIFSE VSG++LQNGMK+PPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           TSNVLSYHLEVPEFKMTLPVEPRFSIPIS++VS SVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]
BLAST of Lsi07G010060 vs. NCBI nr
Match: XP_023005069.1 (F-box protein At5g39250-like [Cucurbita maxima] >XP_023005070.1 F-box protein At5g39250-like [Cucurbita maxima] >XP_023005071.1 F-box protein At5g39250-like [Cucurbita maxima])

HSP 1 Score: 484.6 bits (1246), Expect = 5.6e-133
Identity = 228/249 (91.57%), Postives = 241/249 (96.79%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           M WEEILKVIFPLLEGVDLASCMAVCKQWRDIARDD+FWKCLCAKKWPSTCK P+PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YYKLYQNFYKRPNNR LLPPRLSFDDLEFFIDIWSEDRLIFSEVV+GQVLQ+GMK PPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           TSNV++YHLE PEFKMTLPV+PRFSIPISH+VSVSVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG+IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]
BLAST of Lsi07G010060 vs. NCBI nr
Match: XP_004147232.1 (F-box protein At5g39250 [Cucumis sativus] >KGN55831.1 hypothetical protein Csa_009987 [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 7.3e-133
Identity = 228/249 (91.57%), Postives = 237/249 (95.18%), Query Frame = 0 

Query: 17  MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDT 76
           MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAKKWPSTCKT +PPTDT
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 77  YYKLYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 136
           YYKLY+NFYKRPNNR LLPPRLSFDDLEFFIDIWSEDRLIFSEVVSG + QNGMKNPPP 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 137 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDR 196
           T N+LSYHLEVPEFKMTL VEPRFSIPIS++VS SVL  RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 197 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 256
           TSYRALAFDYLDFSP HPFVSGIRAWISLLFMDDG+DG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 257 WLLDLLDWK 266
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]
BLAST of Lsi07G010060 vs. TAIR 10
Match: AT5G39250.1 (F-box family protein )

HSP 1 Score: 366.7 bits (940), Expect = 1.6e-101
Identity = 171/249 (68.67%), Postives = 207/249 (83.13%), Query Frame = 0 

Query: 20  EEILKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTPNPPTDTYYK 79
           EE+LK +FPLLEG DLASCM VCKQWRDIARDD++WKC CAKKWPS CK   PPT+TYYK
Sbjct: 4   EEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYK 63

Query: 80  LYQNFYKRPNNRHLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPGTSN 139
           +YQ F KR  NR L PPRLSF++LEFFIDIWSE+RL+FS ++ G  L+NG++  P G SN
Sbjct: 64  MYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISN 123

Query: 140 VLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLGRRKDSNKVARIVNKSLFDYIDRTSY 199
           VL  HL  P++KM +P EPRF+IP++ SVSVSVL  R DS+KVARI+N+S+FDYIDR+SY
Sbjct: 124 VLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSY 183

Query: 200 RALAFDYLDFSPLHPFVSGIRAWISLLFM---DDGNDGVIDVFGIVMDFCDAANTKDEVL 259
           RALAF+YLD SP +PF+SGIRAWISLLFM   D  +DG++DVFGI +DF D A+TK+EVL
Sbjct: 184 RALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEVL 243

Query: 260 WLLDLLDWK 266
           WLLD+LDWK
Sbjct: 244 WLLDMLDWK 252

The following BLAST results are available for this feature:
BLAST of Lsi07G010060 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FL822.2e-10068.67F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1[more]
BLAST of Lsi07G010060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BL559.0e-13793.57F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1[more]
A0A5A7TI259.0e-13793.57F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00800... [more]
A0A6J1KTX32.7e-13391.57F-box protein At5g39250-like OS=Cucurbita maxima OX=3661 GN=LOC111498169 PE=4 SV... [more]
A0A0A0L6S13.5e-13391.57F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017250 PE=4 ... [more]
A0A6J1H6B91.0e-13291.16F-box protein At5g39250 OS=Cucurbita moschata OX=3662 GN=LOC111460859 PE=4 SV=1[more]
BLAST of Lsi07G010060 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883374.14.1e-14494.27F-box protein At5g39250 isoform X1 [Benincasa hispida] >XP_038883382.1 F-box pro... [more]
XP_038883395.15.7e-13895.18F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883403.1 F-box pro... [more]
XP_008448789.11.8e-13693.57PREDICTED: F-box protein At5g39250 [Cucumis melo] >XP_008448790.1 PREDICTED: F-b... [more]
XP_023005069.15.6e-13391.57F-box protein At5g39250-like [Cucurbita maxima] >XP_023005070.1 F-box protein At... [more]
XP_004147232.17.3e-13391.57F-box protein At5g39250 [Cucumis sativus] >KGN55831.1 hypothetical protein Csa_0... [more]
BLAST of Lsi07G010060 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39250.11.6e-10168.67F-box family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 12..90
e-value: 6.3E-11
score: 44.0
IPR001810F-box domainPFAMPF12937F-box-likecoord: 21..59
e-value: 2.4E-10
score: 40.1
IPR044207F-box protein At5g39250-likePANTHERPTHR47722EXPRESSED PROTEINcoord: 17..265
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 20..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G010060.1Lsi07G010060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding