Lsi07G009750 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi07G009750
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L20, chloroplastic
Locationchr07: 12836320 .. 12850539 (+)
RNA-Seq ExpressionLsi07G009750
SyntenyLsi07G009750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTTGAATGTGGGTCAAACTTTATGCTTATCACTTTGTGCACAAAGGAAAAAAAAAAGATAAAACTTTGTTTATCTAATAAAATAAATCAAACTAGTTTCGTTCACGTTATTCTCAAAAAGAGGAAAGAAAAATATTTAGAAAACAAATATATATATGTGTGTGTGGCATGAGACAACTGCTATCATTGACAGGAAGGAAAATGTCTTATCTTAATAATTTAACAAATTTTATTTTAGGTATGAATGAACTCTCTTTTTGAGGGAATTACAATTATATACATGCTTCTGAGAAAAAGAAATATATAAAATGACAATGATTTAGCATTGGTTGGGGATGTGGGATGATCATAAGCAGGTTGTGGCTCTAGTTAACGCGAGAGTTGATTGGATGTTAGGTATCAGGAGAGAGGAATAGAGTAGGCACGTTCATTTTTGTTCTCTGTTTAGGCGGGAGGTAAGGTAAAAAGATTCTCCATAACCTAAATTTTGGAATAATTGCATAAAACATCCCTTTTAAAAGTTTAAAATAATAAATGGCTTAAACTTTTTAAAAAAAATGTCAAATGACCTTTAGATGATGTCATGACTATGAAAATTTACAGTATTACCCTTTATTTTTTTCTTCTTTTTTCAAAACTCTCCGACTCCCTTCTTTTTTCCTTTTTCTTTTTCTTTTTCTTTTTTTTTCTTCTTTTTCTTCTTCGCGTCTCTTCTTCAACTTCCTGTCTCTTCTTCTTCTACTTCTTCTCTCACACAAGCAACTCCGATGCAACCAGTTTTAGTGAGCAAGAGCGACAATGAGCGAGCGAGTGCGAGTGCGAGAGAGAGAGAGCGAGATGTGCGCAACAGTGACGAGAGCGAGAGCGAGATGAGATACATTGTGAGAGATAAAAAGAAGAGAGAGCGAGAGCAACAGGGAGCGAGAGTGAGAGCCAGAGCAACATTGAGCGAGAGCGAGAGTGCGTGCGAGAGGGAGAGCAAGATGAGAGGGATTGTGAGTGAGAAAAAGAAGTGAGAGCGAGATGAGCTTTTCCGCGTGCGCGAGCTCATTTCGGCAATTTCATCCGATCTTGACGTCAGCAAAGGGTCATTTGACATTTTTTTCAAAATCCGGGTCATTTGGCATTTTCGGCCCAATTTTTGGGTTGTCCGTACAAATTTCCCCTAAACCTTTTCCATTTTCGTCTCTGTCTCTATCTTGTTTGCCATTTTTTAATTTAGGGCAAAATACACTGAAAAAAACCAAATAACTTAAATAACTACTATTGAAATTTTTTAATTAAATAGTTAATTTTCTCACTGATTTTTTATATGTAATTCTATAGGAAAATTTGAATTTAAAGAGAAATTACTTATCATTTAATTGTCACATCATTTTTTCGTTAGTCAACTAAGGGTCTAAATAGCCTTAGAGACCATTTAGAACCATTTTTAAAACTTCAGGGACTAAAGTGTTTGTTTTGAAATTTTAGGGACCAAATAGACATCAACTTCAAACCTCGGAGACTAAAAGTGCATTTTGCTCTTTACATTATTGGGCTGGTTGCACAAGTAACAATTAGGCCTAAAATAATAAAAGATGTAGTACAAGGAAAAACATATTAGAAATATGATACAAAATTAGCGCTAGATATAACTGATAGCAACTATCAGTGATAGTCATATTGGTAAATGACTAAAAAGCCCATGTGCACCATTTCACGCTTCTTCTTCCAGTTTTCTTAAATTGAAAGTTATCACTGATAGTAGATATTAGTGATAGCCACTTATAGCTACTATCAGTTTCTATCACTGATAGATGCTATTAATTATAGCTTTCAATCTGAGAAATATTAATACAACCTTGAAATAGTAACAATTGAGATATTAGCTTTCAATTTGGTATCAGATATCATTGGCTATTATTGATACACTTTCATCAATTGGAATCAAACTTGAAATATTAACACTTCAAGATTATTAGTGGCTATCAATGATAAACTTTTATAAGTAGCTATCAACTTTGAAAGGAAACTATCAACTTTCAAATATTAGCATTTAAAACTATAAGTTATAGAAGTCTATCAATGAGAGGTCTATAAGTGACTATCACTAATATCTATTTAAGTCATATCATCAATATCATTAATATCATTCATTTAATTGATATATACATAAGTCATATCATTGATATATGGATATCACTGATAGCTTCTACCAGTGTCTATCACCGATAACTTTAGCAGTGGCTATCAATGATAGACTTTCATAAAATGGAATCGATTTTTATATCATTGATATCATCAATATATGGATATCACCTAAGTTCTATCACTAATATCATTAATATCACTTTTATATCTTGGTTATTGGTGATGGCTTCTATCACTAATAACATGCTATCATAGATAACTTCTATCATTCTTTTTTACCATCAAGTAATATACTATTAGTGACAACTTCTAGGCATCCTACTTACACTTTAGTTCGAGATTCAACTTTATTAATTAAATTCACTAAGTGGGTATTAATGATAGACTTCTATAAGTGGCTATTAAATGTGAAAGAAAATCATCAAATATTATGCTATCAATGATAGAAAATATTAGTGGCTATCACTAATAGACTTTCATTAGTGACTATCAATTTTAAAAGATTAACACTCAAAGCTATCAGTGGCTATTATTGAGAAACTTTTATCATGATTATCAATAATAGACTTTTACCACTAATAAACTTCTATCATTGATATCTACCTAAGTTCAATATCAGATACATGAATATGACTGATATATATCTAAGTTCTATCACTAATATCACTGATAATAGATATTATTGATACACAAATATTTAGTGAGTTCTTTTCTAACATTTAAAAATATGAATAGTCAGTGAATTTTCAATGATAAAATTCTTTGAGTTACTAATTTATAAGTATATTAGTGACTATCATTGATAGATTTATATTATTATATCATAATAGTGAAGTCTATCACTCATAGCTACTAATAGATTCTATAAGTTTTAGACTTTTACTTTTATCTTAAGTATTTACTAATAAATTAGTATACGTTAGTCGATAAGAATTTATAAGCCATAGACTTCTATCGCTTATCAAAGTAGTTTCAGTGATAAAAATCTATCCTTGATAAACTATAATAGACTTAATATATTAGTGATATCATAGGTCATCAATGATAAAAGTTTGTTACTAATAGATTTCATAATTTTAAAGTCTTATAAAAAGAAAAAAAAAATATTGGCCTGTTTAATTGGAAAGGTTTGGAGAGAGGAGGGGATTGAGAGGATGGAAGCAAAATAAAAATAAAAATAAAAATAAAAAAATAAAAAAATAAAAAAATAAAAAATGAGGGGGGGGGGGGAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAATAAAACCAAAAACAGAGAAAAGAAAGAAAATTAAAAAAAAAAAAAAAAAAAAAAAAGTGAAGAGTGTTGAAGGAGAAATTTTGGACCAATCACAAATTGCCACGTTATTTCTCAAATTAATGGCAAAATTAGAAACAATTAAATTTGGGACTAATTAAAAGTTACATGTGTCCTAAATTGAAATTGAAGACACAAAATTGGCAAATCTCGATGGTGCCACGTGTTTTCATCGTCACCGTTGGATCAAAATAATTATTTTTCTTTTTTGGTTCAATTAATTATTAATGTTTGGGCTAAAATTTAATTAAGTACAAAAAATAGACTTAATTTAGCCGAAAGGGCCCAAAAGCCCAAATCCAATTAGTTGGGCCCAATGGGCCAGGTCCATGAACCAATCAAGCCCAAGCCCATAAAAACCACATGAGAACTCTATAAATAGAGAAGTTCTCTTCATTTACAGGGTTTAGAAATTTTACACTCAGAGAGCCTAGAGAGAATTCTCCCTACAATCAGAAGACTCACTAACTCCTGAAGCTGAATCATACTTGAAAACTGAAGTTCTTGGAATACATACATCCATCCAAGACTCCAACTTCACGTGCATCCACGCGTTTCGCTTCCATACATCAAGCGTACGCGTACAGTTGAGAGAGAATCAGAGGATCAAGTACTAGAGATCGAACCACATCCGCATCAGACTTATATAAACACAAGTTCAACTCCACGAATTAAATTTCTTCGGAAATCCTGTGTGAACAAATTGGCACACCCGGTGGGACTCCTCTACCTCTCATCTCTCTCTCAACACTCAAACCAAGCAATGGCCTCTAAGAAAGTTGTGTCCAACGCTCCTGCTGCATCCAACGCTCCTATCGCGTCCAACGCTCCTACTGCGTCCCATGCTCCTGCTGCGTCCAACGCTCCTGCCGCAAGCGATGCATACACAGGATCTATCACTTGCAGTCGCTCAAAAGAGATCATGCAGGAGAAGGAACAAGGTTCTGCCGTTGCAGAGAACATCTTGAAGCGATTGACAAAATCTCCTAAAGGCGGGATTGTCATCAAGGAAAATCCTTTGTTTGACAACTCTGCTCCTGCGTCTGACCGATCCAAGAAGGAATCACACCCTGATGTGATGTCCGTCATGATGGCTGACATAATGACTGAGGCAGCCATGGCGGAATTGGAGAGGAAGATAAACTTCTTAGCAAAGGCTCTCGAGGAGAGAGATAATGAGATCGCCGCTTTGAGAGAGCAAATGCAGGCTCGAGAAACTGCTGAGTCGAGCCAAACTCCCGCTGTCAAGGCAAATGACAAAGGAAAAACTCTGCTGCAGGAAAGCCAGCTGCAGCACTCTACTTTCGTCGCCTCCCTGTCAGTCCAGCAACTGCAGGACATGTTCACAAATACCATCAGAGTCCAGTATGGGGGATCGCCACAAACTTCTTTTATGTACACCAAGCCATACACTAAAAGAATTGACAACCTCATAATGCCTGCCGGATATCAACCACCAAAATTCCAGCAGTTCGATGGAAAGGGCAACCCTAAACAACACGTTGCTCATTTTGTTGAAACCTGCGAAAATGCAAGGACTAGAGGAGATCAACTGGTTAGACAGTTCGTCCGTACCTTGAAAGAAAATGCTTTCGATTGGTACACCGATCTAGAGCCAGAAGTGATTAACAGTTGGGAGCAGTTAGAAAGAGAATTCCTGAACCGCTTTTACAGCACTAGGCGGACTGTTAGCATGATGGAGCTAACAAACGCCAAACAGCAGAAGGGAAATCCAGACATCGACTACATCAACCGATGGAGAGCTCTAAGCCTTGATTGTAAAGATAGACTCACTGAACTATCTTCAGTGGAGATGTGCACCCAAGGCATGCACTGAGAACTTCTCTACATCCTACAGGGAATAAAGCCTCGCACATTTGAAGAGTTGGCGATTCGCGCACATGATATGGAGTTGAGCATCGCCAATAGAGGAACAAAGGACTTCATGGTCCCAGGAGAAAAGAAGGATAAGAAGGATACAAAGGGCACCGAGAAAACTGTGAAGAGTGCGATGAAAGAATCTATGGTCGTCAATACGACCCCATTAAAATTTTCCTCTAAAGGAGAGATTCAAGAGCTGAAAAGAAAGATTATGGAGGCGAGCGACGTCGCCTAACTTCGAAGGAGAGGCAGGAAAAGGTTTATCCACTCCCTGACTCTGATGTTGCAGATATGCTAGAGCAGCTGCTAGAGAAACAACTGATTCAACTGCCAGAATGCAAGCGGCCGGAGCAGTCAGGAAAAGTCAATGACCCTAACTACTATAAATATCATCGGGTCGTTAGCCACCCAGTTGAAAAGTGTTTCGTACTGAAGGAGTTGATTATGAGGTTGGCTCGTGAAAAGAAGATTGAGCTAGATTTGGATGAGGTGACTCAGGCAAATCATGCTGTGGTGGCAATGCCTTCAAGCGTTCCACCATCAATACTGTTTTATGATCAAAGTGAAAACTTAATCCAATTTGGGACCTTTGAGCCTATAGTCGTTCGGTTCCAACAGGAGATCATAATGACAGACTCCCAAATCAAAGATGAGTCTGTTGAAGATAATGATGAAGGGTAGATTCTTGTAACTCGTCGAAAGAAAAGAAAGTCGAGCTCCACCAAAAAAGAGTTGCGCTTCCGTCGAGATTACAGAAGATGAAGCAAGACTCATAAAAAGAAGGCAAAGAAGAAGGTGTGGAAGTCTAAGCTTGTCAAGGAGGAGGACGAGGATTTTCCTCAACCTCGGCGACTTGTGACTCTGGAAGAATTTCTTCCAAGAAACTTCCTTAATGATCATCTAGAGGAAGTGCTAGAAGTTGTTGCATGTCGTTAGCACAACAGAAGGCGAAGATATTCCTTCAAGCTCGTTGGAGACGACGGTAGAATCAAAAGACCTACCGTCGTTCAACATAGGTGACTTGTTGTCTCTCCCTCAGACAGCTAAGACTGTTCTTATTGATGCATTGCTAAACACAGGTGCATCAAGTTCATCAAGTTCAAGCGTCCCAGCCTCCAAGGTGCGTACATGTGCTTCGTGTTGCACATCTATAGGCTTTTCAGATGAAGACCTATTGCTGGGATCAAAGTATCATAACAAGCCCTTGTTTGTCTCAGGATACATGCGAGAACAAAGCTTTGGTCGAATTCTCATTAACGATGGGTCAGCTGTCAACATTATGCCTAAGTCGACTATAAAGCAATTAGGTATTTCAGTGGAAGAACTGATGAATAGCAAGTTGGTGATCCAGGGCTTCAATCAAGGTGGTCAACGAGCGATCGGCATGACTCGTCTGAAACTCATTATTGGCGACCTAAAAGCCAACACATTGCCACATCATAGATTCGAGGACCACTTACAAGCTGTTGCTGGGGCGTCCTTGGATTCATGGAAATGGAGTGATAACTTCTACACTCCATCAATGCTTCAAATTTTATCAAGATGGCATTAAGAAGGTTGAAGCAGATTCTAACTCATTCTCAGAAGCTGAGTCCTACTTTGCAGACGCAAAGTTCTACTTAAAGACCGATAATGTCGGTGAAGTTATGCCCGCGGAGGTTCCTCTAATAAAAGGGGAGGATAAGTCCCAGTCCAAGCCACAAATAGATGCAGCAAAAGAACCAAGTGAAGGGGCCAGTACTTCTGACTCTCAAAAGAGTAAGGCATCTACTAGCTCTGCAAAGACTGAAACTTTGGAAGATGAGAAAGCTACAAGTCCTCCAATCTTGCGTTATGTTCCTTTGTCGAGACGCAAGAAAGGCGAGTCACCATTCACAGAATGCTCGAGGGGCTTGAAGGTCGGTGATGTGGAGATCTTAAAAGAAAGTTTTTTTGCACCTTTTACAAAAATAACAAAACAAGAAATTCACAAACTAAAAATGGACCTGACGAAGGTGAATTTGCCTGAAAGACGAACAAAAGATGGGTTCGACCCAAAGGCTTATAAGCTGCTGGCAAAAGTAGGTTATGACTTTACAACTCACATTGAGTTCAAGAGCCTGAAAATTTATGAGCAACCTGAACTTTCTCCGTTCGAGAAGAAGCTTTTGTAGGAAGGATATGCCATACCTGCCTCAAGGAAAGGACTTCGATATAAGTCTCCTGAGCCGGTTCGCATAACTAGAAAGGGAAAGGCAAAAGTGGCTGACAGTAATCACATAACGATAAAGGAGGTTGATAACTCTAAAGAAGGAGAAACCAATGGTCAAAGAACCTCCATCTTCGATCGCATTCGACCACCTGTCGCACGTGGTTTAGTCTTTGAAAGGCTTAGCACGATGGAAATAGAAGAAGAAAGTCAGCGCCCAACACCCAACCTTGGCCGACGCTCTGCCTTTCGAAGGCTTGTCATGCCTTCTGGGAGGAAGAAGACATTCATCATTCTCTAGTGATGACTCGACCCTTGGCATTTGAAAGATTAACTGTGCTTATGAAGAAAAATGAGGAAGCACCTCGCGTGTCAATTTTCAACCGCCTTAAGCATGAAGGTGTCGAGAACCACTCTAACAAAAGGTCGTCTTTCGAGCCAAAAGAAAAAGAAAAGATTTGTGGTGATGCTCCTAGTATACCTGCAAAGAAGAGTGGAGGAAAATCCCGCACATCAATTTGGCGCCGCATTGAGCATGAGGATGCTGAGAACCATTCAAATCAGAAGCCTCTTTGCGAGACAAAGGATGGAGGAGAAATTCGTAGTGTTGTCCCTTCCCGAATGAAAAGAAATTTTTTTGTCACCCTTAATACAAGTGAAGGCTCTTTAAAGGTGAAAAGACGTGATGTTATTTTTACTAAGCCCGACAGTGAAAACTTAGAACAGGAAGAAGGCAAAACTGCATGTCATCATATCACCGTCATCGAAGAGTCGAAGGACGAAATGTCCGAAGAAGATGTGGAAGACGCCCTTCTCACGCTTGAGGATGGTGGTCAATCCACAGTAGATGAACTTAAAGAAGTGAATCTCGGCACAGTAAAGGAACCGCGCCCAACTTTCATTAGCGCGTCTCTCTCAAGTGAAGAGAAGGGCGAATATATGAGCCTGCTTGCCGAATATAGAGACATCTTTGCTTGGTCGTATAAAGAGATGTCGGGCTTGATCCAAAAGTAGCAGTCCATCATCTCGCAATCAAGCAAGGGTATCGACCCGTCAAACAGGCTCAACGACGCTTTCGGCCAGAGCTTATCCCCCAAATTGAAGCAGAAGTCAATAAGTTGATTGAAGCAGGATTCATTCGCGAAGCCAAATATCCAACGTGGATAGCCAACCTTGTTCTCGTTAGAAAGAAGAACGGACAGACTTGCGTCTGCATAGACTTTCGTGACTTGAATAATGCATGCCCAAAGGATGACTTTCCATTGCCTATTACGGAGATCATGGTTGATGCGACTACTGGACACGAGGCCTTGTCCTTTATGGATGGGTCATCCGGGTATAATCAAATACGAATGGCTCTCGTCGATGAGGAAATGACGGCTTTCCGCACTCCGAAGGGAATATACTGCTACAAGGTGATGCCCTTCGGATTAAAGAATGTTGGCGCTACTTATCAACGCCATGCAAAATGTATTTGATGATATGTTGTACAAACATGTTGAATGCTATGTTGACGATCTCGTGGTTAAGTCCAAGAAATGACAAGACCATCTGAGAGATTTAAAAGTTGTGTTTGACCGCTTGCGAAAATATCAGTTGACGATGAACCCTCTCAAGTGTGCATTTGGCGTAACCTCAGGGAAGTTTCTTGGTTTGATTGTAAGGTATTGGGGAATTGAGATAGATCAGTCCAAGATCGATGCTATCCAGAAATGCCAATGCCAAGAAATCTACACGAGTTGAGAAGTCTCCAGAGTCGTTTGGCTTACATACGGAGATTTATTTCCAACCTTGCTGGCCGATGTCAACCTTTTCAAAAGTTGATGAGAAAAGGAGAAAGTTTTAAGTGGGATGAAGCTTGTCAAAATGCTTTTGACAGCATAAAGAAATACTTGCTTAATACCCCTGTCCTAGGCGCTCCCTTAGCAGGCAAGCCGTTGATATTGTACATTGCAGCACAGGAAAGGTCGCTAGGGGCATTACTGGCGCAAGAAGGGGAGAAAGAGAAGGAGCGTGCTCTCTACTATCTAAGTAAAACCCTAACTGGAGCTGAAATCAATTACTTCCCTATCGAGAAAATGTGTCTTGAGCTTTTCTTTGCGATAGACAAGTTGAGGCACTACATGCAGGCTTTCACGGTTCACCTAGTTGCGAAAGCTGACCCCATTAAGTATGTGTTATCTACGCCGATCATCTCCGGGCGCCTGGCCAAATGGGCAATTCTGCTCCAGCAATACGACATTGTGTATGTGTCATAAAAGGAATTCTGCTCCAGCAATACGACATTGTGTATGTGTCACAAAAGGCAATTAAAGGACAAGCATTGGCTGACTTCTTAGCAAATCATCCAATTCCATCAGATTGGAAGTTATGCGAAGACTTGCCCGACGAAGAAGTTTTCTTAGTTGAAATTACGGAGCCTTGGACCATGTACTTTGATGGTGCAGCACGAAGGAGCGGAGCGGGGGCAGACATCGTCCTTATCTCACCTGAAAGACATATGTTGCCTTATAGCTTTACACTTGGTGAATTATGCTCAAATAATGTCGCTGAATATCAGGCTTTAATAATTGGCCTCCAGATGGCGTTAGAAATGGGAATATCGTACATAGAAGTTTATGGCGATTCCAAGTTGATAATCAATCAACTCTTGCTACAGTATGATGTGAAACATGAAGATTTAAAGTCTTACTTCACCTATGTCAGACAGTTGCTGGAAAAGTTCGACAGCGTAATGTTGGAGCATGTACCAAGGTTAGAAAATAAGAAGGCAGATGCTTTGGCAAACCTAGCTACTGCATTGACGATTCAAGATGATGAAACTCTAAACATATCGCTTTGCCAGAGGTGGATTATACCATCAATCGAGACTGAATGCGAAGAAATGAACCTGACATCAGTCTATTTAATTGACGAGGAAGACTGGCGCCAACCCATCATAGATTATCTTGAACATGGTAAACTTCCAACAGATCTCCGTCGTAAAATTGAGGTGCGAAGGAGAGCAGCTCACTTCATTTACTATAAGGGGACCTTATATCGTTGCTCCCTAGAAGGGCTCTTTCTTCAATGCCTCGGAAAAGAAGAGTCAATAAAAGTGCTAGAGGAGGCACATTAAGGCGTATGTGGCGCACACCAATCTGGACCGAAGCTTCAATTCCAGTTGAAGAGGATGGGATACTATTGGCCCAAGATGATCCAGGATTCGATGGAGTATGCAAAGAGGTGTGAAGCTTGTCAATACCATGCAAACTTCATACATCAACCGCCAGAACCCCTGCATCCAACTGTGGCTTCATGGCCTTTTGAAGCTTGGGGACTTGATCTTGTTGGTCCTATAATACTCAAATCGTCAGTAGGACATTCTTATATCCTTGCAGTGACAAATTACTTTTCAAGGTGGGCTGAGGCCATTGCGCTGAAAGAAGCCAAGAAAGAAAATGTGGCAGACTTTAACCGAACTCACATCATCTACCGGTATGGAATTTCCCATCGAATTGTGACGGATAATGGAAGGCAATTTTCTAACAGCCTAATAGATAAATTGTGCGAAAAGTTTAAATTCAAGCAATACAAGTCGTCCATGTACAACACAGTTGCGAATAGGCTAGCAGAAGCTTTCAACAAAACTTTATGTAACCTACTAAAGAAAATCGTCTCTAAGTCAAAGAGAGACTGACAAGAGAAGATTGGTGAAGCGCTATGGGCTTCTCGAACTACTCATTGCACTCCTACAGGAGTTATGCCATATTCTCTTGTTTATGGAGTAGAAGTTGTTCTCCCATTGGAAAGGTAAATTCCATCACTAAGGATGGTAGTTCAAGAGGGGCTAACTACAAAAGACAATGCCAAATTACGTCTTCAAGAGTTAGAGGCACTTGACGAAAAACGGCTAGAAGCTCAACAGACGTTTGAATGTTACCAAGTGCGAATGTCCAAAGCCTTTGATAAGCACGTGAAGCCCCGATCATTTCAAGTTGGTGATCTAGTGCTTGCTATAAGGAAACCTATCATCACAACAAGACATACAGGAAATAAGTTCACTCCTAAGTGGGACGGACCCTATATCGTCAAAGAAGTCTACACAAATGGAGCATACAAGATCGTCGATCAAGATGGATTAAGGATTGGCCCAATCAATGGCAAATTCCTTAAGAAATTTTATGCATGATAAGTATGTAAAATGCTCCTTATTGCAAGAGCCTAAACTGCACGGTGCTCCTGGCCTGCATGAGCTTAAAAGGTGAACGGCCAAAGAAAATTTTGAACTACGTTATGACTTGATCCTTATACATTATGAAGGGTACGTAGGCAACTTGAAGGAAACTTTAAGTTCAGTCACGTCATGAAAAAAAAGTTGAAGATGCCTTACTGAGGGCAATGCAACAAATCAAAGGAGTGCATCGCTAAAGTTGAAGATGTCTGCCTGGCTCCACCTCATTTGCGAGATCAGGTCCGGTCTGCTTGACTCTGCCTTATTTGTGAGATTAAATTCGATCTGCCTGGCTCTGCCTCATCTAAAAGATCAGCTCCGCTCCATCTCCAAATAATGGTACAACTTCACTCCTTCTCCAAAATATTGGTGCAGCTCCGTTCCACCTCTAAATATATTGCTGCATCTTCCAAGACGCATTGGTGTCTCGCAAGTTCCTCTGGGTGGCGAACGAGCTCAGATCTTATGGCGAACCAAATCACTCAGACTCTCGCAACACTGACTATTTCAAATAGATGACCTAGGTAACTCGATCTTAATCTTGAGCTAACTATGAACTCCTATTTATTCGGGAGGGTCAGCTACCCAACTAATCTTCATAATTAAATATCGTTACTGTATAGGTAGATCTCGTTGTGAAAGATCGATTACTAATTAATTCATGGGTAGAGCCAAAGAGGGTGAACTGTACAAGTTAACAATAACATTGATGAAATAAAAGAAGTATCTCCGGTGTATAGAGAGGACCTCACCGTTTAAGAAGTAACCATAGAAACGAAGGAACCCACTATTTCTTTATCCATTTCTATTTTGATTTATTTACTCTATGTTTGTTTTTTTTGATACCTAGTATGAATACAATTTCGTATTTTGGGGTGACTAGAACAAAAAAAGAAATCGTGGTCGGGAAGGTTATAGTAGCAAAAGCCATTGGAATTTTTATTTTATACATTGGAAAAATACGTTTTGTTATTAATAGACTAGGCAAGGAGAAAGGAATAACTGAAAGAAAGGAAATCAATTAGTTATTCATCAAAGTTTCATTTATTCAATGACTAGAATTAAACGAGGATATATAGCTCGGAGACGTAGAACAAAAATTCGTTTATTTGCATCAAGCTTTCGAGGGGCTCATTCAAGTCTTACTCGAACTATTACTCAACAGAAAATAAGAGCTTTGGCTTCGGCTTATCGGGATAGAGGTAGGCAAAAAAGAAATTTTCGACAGTTGTGGCTCGCTCGAATAAATGCAGTAATTCGATCTAATAAGGTAGACTACATTTATAGTAGATTCATACACAATCTGTACAAGAGGCAGTTGCTTCTTAATCATAAAATACTTGCCCAAATCGCTATATTAAACAGAAATTGTCTTTATATGATTTCCAATGAGATCATAAAATAA

mRNA sequence

ATGAAAATTAAACGAGGATATATAGCTCGGAGACGTAGAACAAAAATTCGTTTATTTGCATCAAGCTTTCGAGGGGCTCATTCAAGTCTTACTCGAACTATTACTCAACAGAAAATAAGAGCTTTGGCTTCGGCTTATCGGGATAGAGGTAGGCAAAAAAGAAATTTTCGACAGTTGTGGCTCGCTCGAATAAATGCAGTAATTCGATCTAATAAGGTAGACTACATTTATAGTAGATTCATACACAATCTGTACAAGAGGCAGTTGCTTCTTAATCATAAAATACTTGCCCAAATCGCTATATTAAACAGAAATTGTCTTTATATGATTTCCAATGAGATCATAAAATAA

Coding sequence (CDS)

ATGAAAATTAAACGAGGATATATAGCTCGGAGACGTAGAACAAAAATTCGTTTATTTGCATCAAGCTTTCGAGGGGCTCATTCAAGTCTTACTCGAACTATTACTCAACAGAAAATAAGAGCTTTGGCTTCGGCTTATCGGGATAGAGGTAGGCAAAAAAGAAATTTTCGACAGTTGTGGCTCGCTCGAATAAATGCAGTAATTCGATCTAATAAGGTAGACTACATTTATAGTAGATTCATACACAATCTGTACAAGAGGCAGTTGCTTCTTAATCATAAAATACTTGCCCAAATCGCTATATTAAACAGAAATTGTCTTTATATGATTTCCAATGAGATCATAAAATAA

Protein sequence

MKIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWLARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK
Homology
[Close]
BLAST of Lsi07G009750 vs. ExPASy Swiss-Prot
Match: Q4VZJ4 (50S ribosomal protein L20, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.2e-52
Identity = 109/115 (94.78%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSN VDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNNVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy Swiss-Prot
Match: Q09G23 (50S ribosomal protein L20, chloroplastic OS=Platanus occidentalis OX=4403 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.1e-46
Identity = 97/115 (84.35%), Postives = 105/115 (91.30%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +I+RGYIARRRRTKIRLFAS+FRGAHS LTRT TQQK+RAL SA+RDRGRQKRNFR+LW+
Sbjct: 3   RIRRGYIARRRRTKIRLFASTFRGAHSRLTRTTTQQKMRALVSAHRDRGRQKRNFRRLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
            RINAVIR NKV Y YSR IH+LYKRQLLLN KILAQIAI NRNCLYMISNEIIK
Sbjct: 63  TRINAVIRENKVSYSYSRLIHDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy Swiss-Prot
Match: Q09WZ4 (50S ribosomal protein L20, chloroplastic OS=Morus indica OX=248361 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.8e-45
Identity = 96/115 (83.48%), Postives = 106/115 (92.17%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSF+GA S LTRTITQQKIRAL SA++DRGRQKR+FR+LW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFQGARSRLTRTITQQKIRALVSAHQDRGRQKRDFRRLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
            RINAVIR+NKV Y YS  IH+LYKRQLLLN KILAQIAILNRNCLYMISNEI+K
Sbjct: 63  TRINAVIRANKVYYSYSTLIHHLYKRQLLLNRKILAQIAILNRNCLYMISNEILK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy Swiss-Prot
Match: Q7FNS5 (50S ribosomal protein L20, chloroplastic OS=Atropa belladonna OX=33113 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-44
Identity = 96/115 (83.48%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRAL SA+RDR R+KR+FR+LW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRKKRDFRRLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
            RINAVIR   V Y YSR IH+LYKRQLLLN KILAQIAI NRNCLYMISNEIIK
Sbjct: 63  TRINAVIRERGVSYSYSRLIHDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy Swiss-Prot
Match: B1NWH3 (50S ribosomal protein L20, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-44
Identity = 95/115 (82.61%), Postives = 104/115 (90.43%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +I+RGYIARRRRTKIRLFASSFRGAHS LTRTI QQKIRAL SA+RDR RQKRNFR+LW+
Sbjct: 3   RIRRGYIARRRRTKIRLFASSFRGAHSRLTRTIIQQKIRALVSAHRDRDRQKRNFRRLWV 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
            RINAVIR + V Y YSR I+NLYKRQLLLN KILAQIAILNRNCLYMISN+I+K
Sbjct: 63  TRINAVIRESTVSYSYSRLINNLYKRQLLLNRKILAQIAILNRNCLYMISNDILK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy TrEMBL
Match: A0A249RZK5 (50S ribosomal protein L20, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy TrEMBL
Match: A0A1S4EU28 (50S ribosomal protein L20, chloroplastic OS=Cucumis melo OX=3656 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy TrEMBL
Match: A0A2Z2CH93 (50S ribosomal protein L20, chloroplastic OS=Coccinia grandis OX=387127 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy TrEMBL
Match: X2F1S9 (50S ribosomal protein L20, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. ExPASy TrEMBL
Match: A0A286NG26 (50S ribosomal protein L20, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=rpl20 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. NCBI nr
Match: YP_004841806.1 (ribosomal protein L20 [Cucumis melo subsp. melo] >YP_009860096.1 ribosomal protein L20 [Cucumis melo subsp. agrestis] >ASY96631.1 ribosomal protein L20 [Cucumis melo var. conomon] >ASY96719.1 ribosomal protein L20 [Cucumis melo var. makuwa] >ASY96806.1 ribosomal protein L20 [Cucumis melo var. momordica] >ASY96893.1 ribosomal protein L20 [Cucumis melo var. dudaim] >ASY96980.1 ribosomal protein L20 [Cucumis melo var. cantalupo] >ASY97154.1 ribosomal protein L20 [Cucumis melo var. inodorus] >ASY97328.1 ribosomal protein L20 [Cucumis melo var. flexuosus] >QJF46406.1 ribosomal protein L20 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 4.4e-50
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. NCBI nr
Match: YP_009317409.1 (ribosomal protein L20 [Coccinia grandis] >YP_009420817.1 ribosomal protein L20 [Citrullus colocynthis] >YP_009431665.1 ribosomal protein L20 [Citrullus rehmii] >YP_009456169.1 ribosomal protein L20 [Lagenaria siceraria] >YP_009752350.1 ribosomal protein L20 [Bryonia marmorata] >YP_010131117.1 ribosomal protein L20 [Benincasa hispida] >QHB75986.1 ribosomal protein L20 [Cucumis melo subsp. melo] >QNM38554.1 ribosomal protein L20 [Lagenaria siceraria var. microcarpa] >QZL38616.1 ribosomal protein L20 [Citrullus naudinianus] >AHM88712.1 ribosomal protein L20 [Lagenaria siceraria] >AHM88771.1 ribosomal protein L20 [Lagenaria siceraria])

HSP 1 Score: 208.0 bits (528), Expect = 4.4e-50
Identity = 110/115 (95.65%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. NCBI nr
Match: YP_009326012.1 (ribosomal protein L20 [Citrullus lanatus] >YP_009348054.1 ribosomal protein L20 [Citrullus mucosospermus] >YP_009431580.1 ribosomal protein L20 [Citrullus amarus] >APW82484.1 ribosomal protein L20 [Citrullus lanatus subsp. vulgaris] >QZL38704.1 ribosomal protein L20 [Citrullus ecirrhosus] >APD52503.1 ribosomal protein L20 [Citrullus lanatus] >APW82569.1 ribosomal protein L20 [Citrullus lanatus subsp. vulgaris] >APW82654.1 ribosomal protein L20 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 207.6 bits (527), Expect = 5.8e-50
Identity = 109/115 (94.78%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRF+HNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFVHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. NCBI nr
Match: AHM89948.1 (ribosomal protein L20 [Lagenaria siceraria] >AHM90184.1 ribosomal protein L20 [Lagenaria siceraria])

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 109/115 (94.78%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQK RALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKXRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSNKVDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNKVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. NCBI nr
Match: YP_009004067.1 (ribosomal protein L20 [Cucumis hystrix] >YP_009346507.1 ribosomal protein L20 [Cucumis x hytivus] >YP_247622.1 ribosomal protein L20 [Cucumis sativus] >Q4VZJ4.1 RecName: Full=50S ribosomal protein L20, chloroplastic [Cucumis sativus] >ALF03324.1 ribosomal protein L20 [Cucumis sativus var. hardwickii] >AVE15354.1 ribosomal protein L20 [Cucumis sativus var. sativus] >AAZ94674.1 ribosomal protein L20 [Cucumis sativus] >ABI97440.1 ribosomal protein L20 [Cucumis sativus] >ABI98768.1 ribosomal protein L20 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 109/115 (94.78%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTKIRLFASSFRGAHS LTRTITQQKIRALASAYRDRGRQKRNFRQLW+
Sbjct: 3   RIKRGYIARRRRTKIRLFASSFRGAHSRLTRTITQQKIRALASAYRDRGRQKRNFRQLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
           ARINAVIRSN VDY YSRFIHNLYKRQLLLN KILAQIAILNRNCLYMISNEIIK
Sbjct: 63  ARINAVIRSNNVDYSYSRFIHNLYKRQLLLNRKILAQIAILNRNCLYMISNEIIK 117

[Close]
BLAST of Lsi07G009750 vs. TAIR 10
Match: ATCG00660.1 (ribosomal protein L20 )

HSP 1 Score: 167.9 bits (424), Expect = 4.7e-42
Identity = 87/115 (75.65%), Postives = 102/115 (88.70%), Query Frame = 0 

Query: 2   KIKRGYIARRRRTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWL 61
           +IKRGYIARRRRTK+RLFASSFRGAHS LTRT+TQQ+IRAL SA+RDRG++KR+FR+LW+
Sbjct: 3   RIKRGYIARRRRTKLRLFASSFRGAHSRLTRTMTQQRIRALVSAHRDRGKRKRDFRRLWI 62

Query: 62  ARINAVIRSNKVDYIYSRFIHNLYKRQLLLNHKILAQIAILNRNCLYMISNEIIK 117
            RINAVI    V Y Y+ FIHNLYK+QLLLN KILAQIA+LNR+CLY ISN+I K
Sbjct: 63  TRINAVIHEMGVFYSYNEFIHNLYKKQLLLNRKILAQIALLNRSCLYTISNDIKK 117

[Close]
BLAST of Lsi07G009750 vs. TAIR 10
Match: AT1G16740.1 (Ribosomal protein L20 )

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 13  RTKIRLFASSFRGAHSSLTRTITQQKIRALASAYRDRGRQKRNFRQLWLARINAVIRSNK 72
           + +I   A  FRG   +  R   ++  +AL  +YRDR  +KR  R LW+ RINA  R + 
Sbjct: 3   KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINAGSRQHG 62

Query: 73  VDYIYSRFIHNLYKRQLLLNHKILAQIAI 102
           V+  Y  FIH L K  + LN K+L+++++
Sbjct: 63  VN--YGNFIHGLMKENIQLNRKVLSELSM 89

The following BLAST results are available for this feature:
BLAST of Lsi07G009750 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZJ42.2e-5294.7850S ribosomal protein L20, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl20 PE=... [more]
Q09G233.1e-4684.3550S ribosomal protein L20, chloroplastic OS=Platanus occidentalis OX=4403 GN=rpl... [more]
Q09WZ45.8e-4583.4850S ribosomal protein L20, chloroplastic OS=Morus indica OX=248361 GN=rpl20 PE=3... [more]
Q7FNS51.7e-4483.4850S ribosomal protein L20, chloroplastic OS=Atropa belladonna OX=33113 GN=rpl20 ... [more]
B1NWH31.7e-4482.6150S ribosomal protein L20, chloroplastic OS=Manihot esculenta OX=3983 GN=rpl20 P... [more]
BLAST of Lsi07G009750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A249RZK52.1e-5095.6550S ribosomal protein L20, chloroplastic OS=Cucumis melo var. cantalupensis OX=3... [more]
A0A1S4EU282.1e-5095.6550S ribosomal protein L20, chloroplastic OS=Cucumis melo OX=3656 GN=rpl20 PE=3 S... [more]
A0A2Z2CH932.1e-5095.6550S ribosomal protein L20, chloroplastic OS=Coccinia grandis OX=387127 GN=rpl20 ... [more]
X2F1S92.1e-5095.6550S ribosomal protein L20, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rpl20... [more]
A0A286NG262.1e-5095.6550S ribosomal protein L20, chloroplastic OS=Cucumis melo var. flexuosus OX=11207... [more]
BLAST of Lsi07G009750 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_004841806.14.4e-5095.65ribosomal protein L20 [Cucumis melo subsp. melo] >YP_009860096.1 ribosomal prote... [more]
YP_009317409.14.4e-5095.65ribosomal protein L20 [Coccinia grandis] >YP_009420817.1 ribosomal protein L20 [... [more]
YP_009326012.15.8e-5094.78ribosomal protein L20 [Citrullus lanatus] >YP_009348054.1 ribosomal protein L20 ... [more]
AHM89948.11.7e-4994.78ribosomal protein L20 [Lagenaria siceraria] >AHM90184.1 ribosomal protein L20 [L... [more]
YP_009004067.11.7e-4994.78ribosomal protein L20 [Cucumis hystrix] >YP_009346507.1 ribosomal protein L20 [C... [more]
BLAST of Lsi07G009750 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00660.14.7e-4275.65ribosomal protein L20 [more]
AT1G16740.11.5e-0837.08Ribosomal protein L20 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005813Ribosomal protein L20PRINTSPR00062RIBOSOMALL20coord: 11..40
score: 41.01
coord: 76..102
score: 47.36
coord: 41..70
score: 54.24
IPR005813Ribosomal protein L20TIGRFAMTIGR01032TIGR01032coord: 1..112
e-value: 4.7E-25
score: 86.1
IPR005813Ribosomal protein L20PFAMPF00453Ribosomal_L20coord: 2..107
e-value: 1.8E-30
score: 105.2
IPR005813Ribosomal protein L20PANTHERPTHR1098639S RIBOSOMAL PROTEIN L20coord: 2..114
IPR005813Ribosomal protein L20HAMAPMF_00382Ribosomal_L20coord: 1..116
score: 23.161081
IPR005813Ribosomal protein L20CDDcd07026Ribosomal_L20coord: 5..112
e-value: 2.92781E-34
score: 112.578
IPR035566Ribosomal protein L20, C-terminalGENE3D1.10.1900.20Ribosomal protein L20coord: 55..116
e-value: 1.2E-17
score: 65.2
IPR035566Ribosomal protein L20, C-terminalSUPERFAMILY74731Ribosomal protein L20coord: 1..115
NoneNo IPR availableGENE3D6.10.160.10coord: 2..54
e-value: 8.1E-12
score: 47.1
NoneNo IPR availablePANTHERPTHR10986:SF1239S RIBOSOMAL PROTEIN L20, MITOCHONDRIALcoord: 2..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G009750.1Lsi07G009750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000027 ribosomal large subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome