Lsi07G009590 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G009590
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Agamous-like MADS-box protein
Location	chr07: 12284425 .. 12290374 (+)
RNA-Seq Expression	Lsi07G009590
Synteny	Lsi07G009590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTCCAACCATTTCTCGACAACTCAATTTGTACTATTCCCTATCTCTCTTTTCTCTCTTTCTTTTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTTTTTTTAAAAAAAATCAATCTTTTTCTTTGTTTCTTTCTTTCCCTCATTAGCAACAATCTCCCCCCCTTCCAGTTCACTTCCCTTATCAACAATTATAGAAACAACAATAATAACAATTCTCTCAAACAATAACATCCATTTCCTTCTTCTTCTTCTTCTTATTGTTGTTGTTGTTTCCCATTAATTCCATATAGATGCTCCTCTTCCTAAACAAAAAGAAGGGTTCATCCTTTTAATTAGGGTTTGTTAGTTAGTTTTGTTTTGAAAATCTCAGCATGGGAAGAGGCAGAGTTCAGCTGAAGAGAATAGAGAACAAAATCAGTCGCCAAGTTACGTTCTCAAAGCGTAGAGCTGGTTTACTCAAAAAGGCCCATGAGATCTCTGTTCTTTGTGAGGCTGATGTTGCTTTGATTGTCTTCTCCACTAAAGGAAAACTCTTTGAGTACTCCTCTGATTCCAGGTTTTTTTTTCCTCTTTTCTTTTTTAAACAATTTAATCACAACTCTTTATTATTTAACATGGTATTAGAGCCAATCAATAATTAAAGATTAGATCTTTCCTACCTATCCTAAAATTCATATGAGGTTGATTTGTTGGGTTTTAATTTGTCTGTTTTTTTCTTCTTCACTATTTTTGGAATAATTAGACTAGCTTTGCTTCACCTTTTACATTACATCAACAAATTTAACTATTACCTACAACATGTTACCATAATAATAATTATAATATAAAAAAATCATCTTTTTCATCCAAGATTTCTCCTTTTTTTTTTCTTTGTTAAAATTCGAAAGGAACCACCAAAAAAATGATGCAAGAAATTTATTTTTTTCTTTTCTTATTTTTTGTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTTTTTTTTTTAATATTGTTTATTTCATTCTACTTGTTTGTGTATTGGCATTTCAGTTTCCTTTTTCTTGCAATTTACTCTACAATTTATACATATATATATGCATGTATTAGACAAGACACAAAGATCACTACATAGTACATGTTACATTTATTTGATAGTCTGAAACAAGGGGAAAAAAACATGGAGTGTTGCAAGAGAATTTCGGTATAGATGAAAATCTTGTATCAATTACTCTTTGTTTGATTAACGATATTATTATTTTTTTTAAGAAAAAAAAAATATTCAATTGGCTTTGGACAAAGGTGAGAAACCTAGAGCCACGTGTCGGGAGACCATGATTTTTTGTTTTTGTTCTTTTTCTTGCTTCGTAGCTCTAACCTAGTATTTGAATCTCTCTATGTTGTTGTTGGTGACCTCGAAGCAAGAGCTTTACCTCTCTTTGAATCATATAATTTCATCAAAAGAGCTGCACTTAAAAAAGGAGTCAAAATTTTGATCCTTAATAATGAATTTTGGTCTATGCTAATTAATTTGGTTTTAATTTATGTATGCATGTTAGATTTTGGTCTATGCATGTGTTAATTATATGCATGGCAACAATAATTTATAGTTTGTTACCATCCCAATTCTATCTTATAGATTGTGAGCGGTAGTGAGATGAACGCACGAAAAGATTTAATGAAAAATGCAAACTATAGATTGACATTTCTTTGGTTATAACTATTCATTATTGATCTGGTAGATTTTTAGATAGGTTTTTGAGAAATGGAGAGTCGTGATGTTTGAGATCATTGTTTAAACCATATTCTTGTTTGGTTCACTCTGTTTCTTAATCATATTATCTGTTTCAACTTCACATATAATAATTCTGCAATCGTATATCATTTGACTTACCTATACTGTTGTCATTAGATAGATGACTATAGCAAACACATTACTTCAATGTATTTAAGATTATATAAATAAAAATCCAATCGTTTCTTTTACGCTTTGATTTTCAATGTCATTTCATAACTACACTATTGTTTAACCACATTATTTATTTCAACTTCACACATATAATGGTTATCCAACTATATAGTTACTCACCTATATTATTATCGATAAATAGACGATCATAGCTGTAAAAACTCATAACCTCAACATATTTCATGTTATATAAATATGTCCAATAATTTCTCCTATGCTTTCATTTTGAATGCCATTTTTGAGGAATTTCTATTCTAAAATGTGTGATCAACTGTTACTACTTGTAAAAAAAACTAGTTAATTAAGGCTTTGAACTTGGTTTCCAAAAACAGCATGGAGAAAATCTTAGAAAAATATGAGAGATATTCTTATGCAGAGAGACCACTGGCCCCAAATGGAGATTCTGAATTACAGGTAAATAAACAAATCTGAGTGTTATTTGCCTTTCATTTACCAAAATTTTAGGTCTTTTCCTTTTATATTGATTGGCAAGTTCAAATCCAAAATTCATTTTATGTTAGAATGTTTGACATTGAAGTTTTTGGAACATTCTTGCTGTTCACAACAATTTCTTACAACAAAAAGGACAGATTTACAAATGTCAACACATAATGGTTTTAAGGTCTGGAATCATGATGTCTTGTCTTGGATTTACAACACTGATCTTGCTAGTACAGTTTATTGGCTGTCTTGTCTTGTCCTTTCATTGGTTGGAGGGAAAATCAAAGTCTCCCACATTGCTTAAAAAAACCATTACTAGTTACTAATTAGGCTACTTATATCTTTCTTAATTTCAATGGTCCAATAACTCTATGTAATTACAAAATATGATCTATTAAATTTAATTCAAATTAAGGGCTAAAATAAGTTAATACTAGATCTTTTAAGTGTTAATATTTTCACTATTATTTAAACAAAGACATTATTAAATGATCTAAATAATCAAAGATTGAGTGTTATCATTTAACTAAATTTTATTAAAAATGGACAAATTTGCAACTCAAATAAGCATGTCGTGTCTAAAAAATATCCCATAAATACTTTCATTGTTCCATTCCAACATTATTTTCTGTACTGTGTTACTACATTTTATGTAGGATAAATGCATGGTAGAAAATTACAATTAACTTTTCTTTTTCTTTTTTTCTTCTTTTTTTAATTAAAATGCTTTGGCAGGTAAGTTGGTGTCAGGAGTATCCAAAACTTGCAGTCAGATTGGAAATTATACAGAAGAACTTGAGGTATTTGAACAGTTCTTATGCACTATTCATTTTTGAAAAAAGAAAAAATGTTTTCACTATTTATGGAGCTTATATATTACTTTTATACTACCTAATTTGCTATTAATTCGATTGCTTTATCTCCTTTTATTCAGAAAGAAGGAAATAATACAAGAAGTCAATGTTCAATTAATATCAGAATTTTCTATTATGAATGAAGTAAAGGACATCAAAAAAATTTTAATTTAAAAGGTTTATTATTGGGGAATTTTTAAAAATAGAAGAATAAAGAAAACTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTAATACATCAAGTCTATCAGGATTTATTAATGACAGAAATAATAAAAGTCTATCACTGATAGATGCTGATAGAAGTCTATCAATGTCTATCAGTATTTTTTTTGTTATTTTCTGTAAATAGTTTGACATTTTTTCTATATGTGAAAATTTCTCTTTATTATTTGTATTAAGATAGTATATCTTCTAAAATATTTCTTTTTTTTTTTTCTGTAAAATGGTGTATTTTTTAATATATACCTTTTTTTTCTCTAGGATTTTATGAAAGTTTATGATATCCTTTTTCAAAAAAAAAAAAATTATATAATTTTGACATGAGAAATGGGATGTAAATTCTTTCCAGGTGTAATTTTTTCAAGTATTATTGGTTAGATATATTAAACCATTGATTAGTACAAATTGTAAATGTTTATATTATTATTATTGGTTTAGGCATTATTTGGGAGAAGAACTTGACCCTTTGAATTTGAGAGAACTTCAAAGCTTGGAGCAACAACTTGATACATCACTCAAGCGCATAAGATCTAGAAAGGTCTGCCTTAAGCAATGCCCTAATTTTTCTTTTCATCTTTACTTCATTTGAATTAATCATCTCTTTTTTAAATAAATTTATTCACATTTGGATTGTTCATTACCTAATTTGATATTGATGATCTTCAAAATTTGTATATATAATTTCTTACCATCATTTGTGCCATTATATCAATATGAGAACCAACTTTCCTCCTACACATTTTCTTCACTTTGTCGATATTTTCATCAATATATTAAAAAAAAATTCCATTAATATATAAATTTCGACCACAAATCATCATGAATAATATCTATCTGCATAAAATACTTCATTGATATTTCATTAACATCCAAATTTCTATCCCTTAATATCTTGCTCATAAATCGACAATGTAAATGATTATGGGGTTACTTTGTTGCAGAACCAACTAATGCAAGAATCCATTTCAATACTACACAAAAAGGTGAATAACATAACTTTGGAGCAATGTTTCGGTATACAATTATGGATGTTATGTTTTCTTCCATTATGAGTAAAGTTTGGTTCATAAAATGGTTGCAGGAAAGGGAATTGCAAGAGGAGAACAGGCAGCTAGCAAATAAGGTATAAATTAATGTCTCATTTTAGGTGATACAAGTTAAAGTAATTTATTGTTTAATGGTCTCTAAGAATGTAATATAATGTGTTTTTATTTTATGATTTGAAAATATTAGGTGAAAGAGAATGAGAAGGTTTTGGTTGAACGTGGACACTGCGACGACCTCCCAAACTTGGTTCATAATCAGCCCATTTTTGCAATGCCACCACCAATTATTCCTTCTTTATCTATTGGGTACTTATGCCTCTTCTTTCTCTCTTTCAGCCATGAGAAAAAAAAACTTTACCATATACATTTATATCTATCAAGGAAATATAATCATTTTATTGACATATATGTTTGACCCATATAGAATTAGTGTCAAAATGAGCGTAACTCAACTAACATCAAGTATATACTATCGATTTCGCTGTTAGAAGTTTGATCCTACTATTCCATATATTATAAAAAGAAAAGTGAAATTAGAGAATTTGAATCTCTAACATTTAGGATAGATGTGTATAAATGCAACCTAGTTGGTTTTGATTGGTTAGGTTGTTTTTTTGTTTTGGACAATTAATTCAAGAAAATATATGTTTTATTTGGTATTGATTTTGAATAAAACTTGAATCAACCTAAGTACCTTTTTGATATTGTTGGATCATCATGTTAGGGAGGTTAGAAAGTTATAGAAGACACAAAAGATTACATATTAAAAAAAAAAAAACTATTGAAAAACTTCGCCAAGTGAATTTAGAAACCCTAGGCTTGAAATCAAAGATAATAATGATAACTATATACATTTGAATGTAGAGTAAACTTGCATGGAAGAGGATCAGATGAAGATGAAACAAGGGCAACAAACGTCAACAACATCCAAATACCAGCATGGATGCTTAGCCATGTGACTGAAAATCCTCATAACTAAAAAGCAACCGCACGGTCGTCTTCTCCGTTGCAGGCAGGCAAGCAAGTGGTGGTTGCCGCTGCCCTCACCACCACCATTGTCACAAATAAAATGGCCATGGGGATGGGGGGAGAAAAAGAGAAGACAACTGCAAATGCCCTAAAATTCTATGACAACTCTTCTTTCACACCCATATTGGCCACCACAATCCCAAAGCCTTATTGTATTATGTAGAAGATCATTTCTCAAGACTCTAAATTAACTTTAAACTTTTGGAAGAAAAATGAAATGTGGATACTTCCATTTCTCTTTTTTTACCATTTGAACTTGTGGGTGTGTTGGTTAAATTTGTTTATTTATTACATGCCTGCATATTTGTGTTGACTAACTCTTTTTTGTATGAGGTTCTTGTTAGAAAT

mRNA sequence

CTTCCTCCAACCATTTCTCGACAACTCAATTTGTACTATTCCCTATCTCTCTTTTCTCTCTTTCTTTTCTCTCTCTCTCTCTTTCTTTCTTTCTTTTTTTTTTTAAAAAAAATCAATCTTTTTCTTTGTTTCTTTCTTTCCCTCATTAGCAACAATCTCCCCCCCTTCCAGTTCACTTCCCTTATCAACAATTATAGAAACAACAATAATAACAATTCTCTCAAACAATAACATCCATTTCCTTCTTCTTCTTCTTCTTATTGTTGTTGTTGTTTCCCATTAATTCCATATAGATGCTCCTCTTCCTAAACAAAAAGAAGGGTTCATCCTTTTAATTAGGGTTTGTTAGTTAGTTTTGTTTTGAAAATCTCAGCATGGGAAGAGGCAGAGTTCAGCTGAAGAGAATAGAGAACAAAATCAGTCGCCAAGTTACGTTCTCAAAGCGTAGAGCTGGTTTACTCAAAAAGGCCCATGAGATCTCTGTTCTTTGTGAGGCTGATGTTGCTTTGATTGTCTTCTCCACTAAAGGAAAACTCTTTGAGTACTCCTCTGATTCCAGCATGGAGAAAATCTTAGAAAAATATGAGAGATATTCTTATGCAGAGAGACCACTGGCCCCAAATGGAGATTCTGAATTACAGGTAAGTTGGTGTCAGGAGTATCCAAAACTTGCAGTCAGATTGGAAATTATACAGAAGAACTTGAGGCATTATTTGGGAGAAGAACTTGACCCTTTGAATTTGAGAGAACTTCAAAGCTTGGAGCAACAACTTGATACATCACTCAAGCGCATAAGATCTAGAAAGGAAAGGGAATTGCAAGAGGAGAACAGGCAGCTAGCAAATAAGGTGAAAGAGAATGAGAAGGTTTTGGTTGAACGTGGACACTGCGACGACCTCCCAAACTTGGTTCATAATCAGCCCATTTTTGCAATGCCACCACCAATTATTCCTTCTTTATCTATTGGAGTAAACTTGCATGGAAGAGGATCAGATGAAGATGAAACAAGGGCAACAAACGTCAACAACATCCAAATACCAGCATGGATGCTTAGCCATGTGACTGAAAATCCTCATAACTAAAAAGCAACCGCACGGTCGTCTTCTCCGTTGCAGGCAGGCAAGCAAGTGGTGGTTGCCGCTGCCCTCACCACCACCATTGTCACAAATAAAATGGCCATGGGGATGGGGGGAGAAAAAGAGAAGACAACTGCAAATGCCCTAAAATTCTATGACAACTCTTCTTTCACACCCATATTGGCCACCACAATCCCAAAGCCTTATTGTATTATGTAGAAGATCATTTCTCAAGACTCTAAATTAACTTTAAACTTTTGGAAGAAAAATGAAATGTGGATACTTCCATTTCTCTTTTTTTACCATTTGAACTTGTGGGTGTGTTGGTTAAATTTGTTTATTTATTACATGCCTGCATATTTGTGTTGACTAACTCTTTTTTGTATGAGGTTCTTGTTAGAAAT

Coding sequence (CDS)

ATGGGAAGAGGCAGAGTTCAGCTGAAGAGAATAGAGAACAAAATCAGTCGCCAAGTTACGTTCTCAAAGCGTAGAGCTGGTTTACTCAAAAAGGCCCATGAGATCTCTGTTCTTTGTGAGGCTGATGTTGCTTTGATTGTCTTCTCCACTAAAGGAAAACTCTTTGAGTACTCCTCTGATTCCAGCATGGAGAAAATCTTAGAAAAATATGAGAGATATTCTTATGCAGAGAGACCACTGGCCCCAAATGGAGATTCTGAATTACAGGTAAGTTGGTGTCAGGAGTATCCAAAACTTGCAGTCAGATTGGAAATTATACAGAAGAACTTGAGGCATTATTTGGGAGAAGAACTTGACCCTTTGAATTTGAGAGAACTTCAAAGCTTGGAGCAACAACTTGATACATCACTCAAGCGCATAAGATCTAGAAAGGAAAGGGAATTGCAAGAGGAGAACAGGCAGCTAGCAAATAAGGTGAAAGAGAATGAGAAGGTTTTGGTTGAACGTGGACACTGCGACGACCTCCCAAACTTGGTTCATAATCAGCCCATTTTTGCAATGCCACCACCAATTATTCCTTCTTTATCTATTGGAGTAAACTTGCATGGAAGAGGATCAGATGAAGATGAAACAAGGGCAACAAACGTCAACAACATCCAAATACCAGCATGGATGCTTAGCCATGTGACTGAAAATCCTCATAACTAA

Protein sequence

MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSDSSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDPLNLRELQSLEQQLDTSLKRIRSRKERELQEENRQLANKVKENEKVLVERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHGRGSDEDETRATNVNNIQIPAWMLSHVTENPHN

Homology

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BLAST of Lsi07G009590 vs. ExPASy Swiss-Prot
Match: D7SMN6 (Agamous-like MADS-box protein FUL-L OS=Vitis vinifera OX=29760 GN=FULL PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.2e-68
Identity = 148/248 (59.68%), Postives = 180/248 (72.58%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRR+GLLKKAHEISVLC+A+VALIVFSTKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSSD 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSME+ILE+YERYS +ER L  + D + Q +W  +YPKL  R+E++Q+NLRH++GE+LDP
Sbjct: 61  SSMERILERYERYSLSERQLL-STDPDPQGNWSMDYPKLTARIEVLQRNLRHFVGEDLDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKV- 180
           L+LRELQ+LEQQLDT+LKRIR+R              KE+ L E+N  LA KVKE EKV 
Sbjct: 121 LSLRELQNLEQQLDTALKRIRTRKNQLMHESISELQKKEKSLVEQNNALAKKVKEKEKVE 180

Query: 181 LVERGHCDDLPNLVHNQPIFAMPPP--IIPSLSIGVNLHGRGSDEDETRATNVNNIQIPA 232
              R   +   N+  N   + +PPP   +PSL+IG +  GR  +ED   A    N  +P 
Sbjct: 181 QNNRAQWEQQNNIGQNSSAYVVPPPPLQLPSLTIGGSFVGRAVEEDGAEARPSPNTLMPP 240

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BLAST of Lsi07G009590 vs. ExPASy Swiss-Prot
Match: Q42429 (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.0e-56
Identity = 130/250 (52.00%), Postives = 165/250 (66.00%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKI+RQVTFSKRR+GLLKKAHEISVLC+A+V LIVFSTKGKLFEY++D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAND 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           S ME++LE+YERYS+AER L P  D     SW  E+ KL  RLE++Q+N +HY+GE+L+ 
Sbjct: 61  SCMERLLERYERYSFAERQLVPT-DHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLES 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSRK--------------ERELQEENRQLANKVKENEKVL 180
           LN++ELQ+LE QLD++LK IRSRK              +R LQE+N QL+ KVKE EK +
Sbjct: 121 LNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEV 180

Query: 181 VERGHCDDLPNLVHNQPIFAMP----PPIIPSLSIGVNLHGRGSDEDETRATN---VNNI 230
            ++   D   N   N   F +P     P +       N+   G  E    +      NN 
Sbjct: 181 AQQNQWDQ-QNHEINSSTFVLPQQLDSPHLGEAYQNTNVVDNGEVEGGNSSQQQGAANNT 240

[Close]

BLAST of Lsi07G009590 vs. ExPASy Swiss-Prot
Match: Q6E6S7 (Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.0e-56
Identity = 126/217 (58.06%), Postives = 158/217 (72.81%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKI+RQVTFSKRR GLLKKAHEISVLC+A+VALIVFSTKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           S MEKIL++YERYSYAER L    D E Q +W  EY KL  ++E++Q++ RH+LGE+LD 
Sbjct: 61  SCMEKILDRYERYSYAERQLTAT-DPESQGNWSLEYSKLKAKIELLQRSQRHFLGEDLDS 120

Query: 121 LNLRELQSLEQQLDTSLKRIRS--------------RKERELQEENRQLANKVKENEKVL 180
           L+L+ELQ+LEQQLDT+LK IRS              RKE+ +QE+N  LA ++KE EK +
Sbjct: 121 LSLKELQNLEQQLDTALKHIRSRKNQLMYESISELQRKEKAMQEQNNMLAKEIKEKEKTV 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHG 204
            ++ H +   N   N   F +P   +P L++G    G
Sbjct: 181 AQQTHWEQ-QNHGLNTSSFLLPQQ-LPCLNMGGTYQG 214

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BLAST of Lsi07G009590 vs. ExPASy Swiss-Prot
Match: D7KQR8 (Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=CAL PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 131/244 (53.69%), Postives = 170/244 (69.67%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKI+RQVTFSKRRAGLLKKA EISVLC+A+V+LIVFS KGKLFEY+S+
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYTSE 60

Query: 61  SSMEKILEKYERYSYAERPL-APNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELD 120
           S MEK+LE+YERYSYAER L AP+     Q +W  EY +L  ++E++++N RHYLGE+L+
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHINAQPNWSMEYSRLKAKIELLERNQRHYLGEDLE 120

Query: 121 PLNLRELQSLEQQLDTSLKRIRS--------------RKERELQEENRQLANKVKENEKV 180
           P++L++LQ+LEQQL+T+LK IRS              RKE E+QEEN  L  ++KE E +
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMYESLNHLQRKENEIQEENSMLTKQIKERENI 180

Query: 181 L-VERGHCDDLPNLVHNQP-----IFAMPPPIIPS--LSIGVNLHGRGSDEDETRATNVN 222
           L  ++  C+ L N  H+ P      F  P P + S   S  +NL G    ED+T A   N
Sbjct: 181 LRTQQTQCEQL-NRNHDVPPPQPQPFQHPHPYMISHQTSPFLNLGGMYQGEDQT-AMRRN 240

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BLAST of Lsi07G009590 vs. ExPASy Swiss-Prot
Match: Q39081 (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana OX=3702 GN=CAL PE=1 SV=3)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 128/245 (52.24%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRV+LKRIENKI+RQVTFSKRR GLLKKA EISVLC+A+V+LIVFS KGKLFEYSS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  SSMEKILEKYERYSYAERPL-APNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELD 120
           S MEK+LE+YERYSYAER L AP+     Q +W  EY +L  ++E++++N RHYLGEEL+
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 PLNLRELQSLEQQLDTSLKRIRS--------------RKERELQEENRQLANKVKENEKV 180
           P++L++LQ+LEQQL+T+LK IRS              RKE+E+QEEN  L  ++KE E +
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

Query: 181 L-VERGHCDDLPNLVHNQPIFAMPPP--------IIPSLSIGVNLHGRGSDEDETRATNV 222
           L  ++  C+ L   V + P    P P        I    S  +N+ G   +ED+T A   
Sbjct: 181 LRTKQTQCEQLNRSVDDVP---QPQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQT-AMRR 240

[Close]

BLAST of Lsi07G009590 vs. ExPASy TrEMBL
Match: A0A6J1GTY2 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 GN=LOC111457465 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 208/249 (83.53%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLC+ADVALIVFSTKGKLFEYSS 
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSSH 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSMEKILEKYERYSYAERPLAPN DSE Q SWCQEYPKLA RLEI+QKNLRHYLGEELDP
Sbjct: 61  SSMEKILEKYERYSYAERPLAPNRDSESQASWCQEYPKLAARLEIVQKNLRHYLGEELDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLD+SLKRIR+R              KE+ELQEENR+LANKVKENE V 
Sbjct: 121 LNLRELQSLEQQLDSSLKRIRARKNQLMQESISKLHKKEKELQEENRKLANKVKENETVW 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHGRGSDEDETRATNVNNIQIPAWML 236
           VERGHC +L NL HN  I A PPP +PSLSIGVN HGRGSDEDETR T+ NNIQIPAWML
Sbjct: 181 VERGHC-ELTNLDHNHHILATPPP-LPSLSIGVNCHGRGSDEDETRPTSTNNIQIPAWML 240

[Close]

BLAST of Lsi07G009590 vs. ExPASy TrEMBL
Match: A0A6J1J006 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN=LOC111479997 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 208/249 (83.53%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLC+ADVALIVFSTKGKLFEYSS 
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSSH 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSMEKILEKYERYSYAERPLA N DSE QVSWCQEYPKLA RLEI+QKNLRHYLGEELDP
Sbjct: 61  SSMEKILEKYERYSYAERPLASNRDSESQVSWCQEYPKLAARLEIVQKNLRHYLGEELDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLD+SLKRIR+R              KE+ELQEENR+LANKVKENE V 
Sbjct: 121 LNLRELQSLEQQLDSSLKRIRARKNQLMQESISKLHKKEKELQEENRKLANKVKENETVW 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHGRGSDEDETRATNVNNIQIPAWML 236
           VERGHC +L NL HN  I A PPP +PSLSIGVN HGRGSDEDETR T+ NNIQIPAWML
Sbjct: 181 VERGHC-ELTNLDHNHHILATPPP-LPSLSIGVNCHGRGSDEDETRPTSTNNIQIPAWML 240

[Close]

BLAST of Lsi07G009590 vs. ExPASy TrEMBL
Match: A0A6J1GBW9 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 GN=LOC111452570 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.0e-96
Identity = 202/253 (79.84%), Postives = 216/253 (85.38%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLC+ADVALIVFSTKGKLFEYS+ 
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSTH 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           +SMEKILEKYER SYAERPLA N DS+LQVSWC+EYPK+A R+EIIQKN+RHYLGEEL+P
Sbjct: 61  ASMEKILEKYERCSYAERPLATNADSDLQVSWCEEYPKIAARMEIIQKNIRHYLGEELEP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLD+SLKRIR+R              KERELQEENRQLANKVKENEK L
Sbjct: 121 LNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKVKENEKAL 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLH-GR---GSDEDETRATNVNNIQIP 236
           VERGHC +LPNL   QPI AMPPP IPSLSIG N + GR   GSDEDETR TN  NIQIP
Sbjct: 181 VERGHC-ELPNLAPYQPILAMPPP-IPSLSIGANFNDGRGSTGSDEDETRPTN-TNIQIP 240

[Close]

BLAST of Lsi07G009590 vs. ExPASy TrEMBL
Match: A0A6J1DNA2 (truncated transcription factor CAULIFLOWER A-like OS=Momordica charantia OX=3673 GN=LOC111022175 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.1e-96
Identity = 198/250 (79.20%), Postives = 211/250 (84.40%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRR GLLKKAHEISVLC+ADVALIVFSTKGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRGGLLKKAHEISVLCDADVALIVFSTKGKLFEYSTD 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSMEKILE+YERYSYAERP A N DSE QVSWCQEYPKLA RLEI+QKNLR+YLG++LDP
Sbjct: 61  SSMEKILERYERYSYAERPFAGNADSETQVSWCQEYPKLAARLEIVQKNLRNYLGQDLDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLD+SLKRIR+R              KERELQEENRQLANKVKENEK +
Sbjct: 121 LNLRELQSLEQQLDSSLKRIRTRKNQLMQESISMLHKKERELQEENRQLANKVKENEKGM 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHGR-GSDEDETRATNVNNIQIPAWM 236
            ERGHC DLP LV NQPIFAMPP +   LSIG  LH R GS EDETR T+  N+QIPAWM
Sbjct: 181 AERGHC-DLPTLVQNQPIFAMPPQL--PLSIGGTLHERGGSGEDETRPTSA-NVQIPAWM 240

[Close]

BLAST of Lsi07G009590 vs. ExPASy TrEMBL
Match: A0A6J1KHN7 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN=LOC111493332 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.8e-95
Identity = 200/253 (79.05%), Postives = 214/253 (84.58%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLC+ADVALIVFSTKGKLFEYS+ 
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSTH 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           +SMEKILEKYER SYAERPLA N DS+LQVSWC+EYPK+A R+EIIQ N+R YLGEEL+P
Sbjct: 61  ASMEKILEKYERCSYAERPLATNADSDLQVSWCEEYPKIAARMEIIQNNIRRYLGEELEP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLD+SLKRIR+R              KERELQEENRQLANKVKENEK L
Sbjct: 121 LNLRELQSLEQQLDSSLKRIRARKNQLMQESISLLHKKERELQEENRQLANKVKENEKAL 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLH-GR---GSDEDETRATNVNNIQIP 236
           VERGHC +LPNL   QPI AMPPP IPSL IG NLH GR   GSDEDETR T+  NIQIP
Sbjct: 181 VERGHC-ELPNLAPYQPILAMPPP-IPSLFIGENLHDGRGSTGSDEDETRPTS-TNIQIP 240

[Close]

BLAST of Lsi07G009590 vs. NCBI nr
Match: XP_038900501.1 (truncated transcription factor CAULIFLOWER A-like [Benincasa hispida])

HSP 1 Score: 411.4 bits (1056), Expect = 5.3e-111
Identity = 222/252 (88.10%), Postives = 226/252 (89.68%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLC+ADVALIVFSTKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSSD 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSMEKILEKYERYSYAERP+APNGDSE QVSWCQEYPKL  RLEI+QKNLRHYLGE+LDP
Sbjct: 61  SSMEKILEKYERYSYAERPVAPNGDSESQVSWCQEYPKLTARLEIVQKNLRHYLGEDLDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLDTSLKRIRSR              KERELQEENRQLANKVKENEKVL
Sbjct: 121 LNLRELQSLEQQLDTSLKRIRSRKNQLMQESISKLHKKERELQEENRQLANKVKENEKVL 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHG---RGSDEDETRATNVNNIQIPA 236
           VERG C DLPNLVHNQPIFAMPPP IPSLSIGVNL G   RGSDEDETR TN NNIQIPA
Sbjct: 181 VERGQC-DLPNLVHNQPIFAMPPP-IPSLSIGVNLRGRGSRGSDEDETRPTNDNNIQIPA 240

[Close]

BLAST of Lsi07G009590 vs. NCBI nr
Match: XP_004137262.1 (truncated transcription factor CAULIFLOWER A [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 212/253 (83.79%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSMEKILEKYERYSYAERPLAPNGDSELQ SWCQEYPKL  RLEI+QKNLRHYLGE+LDP
Sbjct: 61  SSMEKILEKYERYSYAERPLAPNGDSELQTSWCQEYPKLTARLEIVQKNLRHYLGEDLDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLDTSLKRIRSR              KE++LQEENRQLANKVKENEK L
Sbjct: 121 LNLRELQSLEQQLDTSLKRIRSRKNQLMQESISILHKKEKDLQEENRQLANKVKENEKAL 180

Query: 181 VERGHCDDLPNLVH-NQPIFAMPPPIIPSLSIGVNLHG---RGSDEDETRATNVNNIQIP 236
           VERG C D+PNLVH NQPIF M PP IPSLS G NL+G   RGSDEDETR T++NNIQIP
Sbjct: 181 VERGQC-DVPNLVHNNQPIFGMTPP-IPSLSFGANLNGRGSRGSDEDETRPTSINNIQIP 240

[Close]

BLAST of Lsi07G009590 vs. NCBI nr
Match: XP_023526590.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.4 bits (999), Expect = 2.2e-104
Identity = 208/249 (83.53%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLC+ADVALIVFSTKGKLFEYSS 
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSSH 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSMEKILEKYERYSYAERPLAPN DSE Q SWCQEYPKLA RLEI+QKNLRHYLGEELDP
Sbjct: 61  SSMEKILEKYERYSYAERPLAPNSDSESQASWCQEYPKLAARLEIVQKNLRHYLGEELDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLD+SLKRIR+R              KE+ELQEENR+LANKVKENE V 
Sbjct: 121 LNLRELQSLEQQLDSSLKRIRARKNQLMQESISKLHKKEKELQEENRKLANKVKENETVW 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHGRGSDEDETRATNVNNIQIPAWML 236
           VERGHC +L NL HN  I A PPP +PSLSIGVN HGRGSDEDETR T+ NNIQIPAWML
Sbjct: 181 VERGHC-ELTNLDHNHHILATPPP-LPSLSIGVNCHGRGSDEDETRPTSTNNIQIPAWML 240

[Close]

BLAST of Lsi07G009590 vs. NCBI nr
Match: XP_022955438.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata])

HSP 1 Score: 388.7 bits (997), Expect = 3.7e-104
Identity = 208/249 (83.53%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLC+ADVALIVFSTKGKLFEYSS 
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSSH 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSMEKILEKYERYSYAERPLAPN DSE Q SWCQEYPKLA RLEI+QKNLRHYLGEELDP
Sbjct: 61  SSMEKILEKYERYSYAERPLAPNRDSESQASWCQEYPKLAARLEIVQKNLRHYLGEELDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLD+SLKRIR+R              KE+ELQEENR+LANKVKENE V 
Sbjct: 121 LNLRELQSLEQQLDSSLKRIRARKNQLMQESISKLHKKEKELQEENRKLANKVKENETVW 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHGRGSDEDETRATNVNNIQIPAWML 236
           VERGHC +L NL HN  I A PPP +PSLSIGVN HGRGSDEDETR T+ NNIQIPAWML
Sbjct: 181 VERGHC-ELTNLDHNHHILATPPP-LPSLSIGVNCHGRGSDEDETRPTSTNNIQIPAWML 240

[Close]

BLAST of Lsi07G009590 vs. NCBI nr
Match: XP_022980709.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima])

HSP 1 Score: 387.1 bits (993), Expect = 1.1e-103
Identity = 208/249 (83.53%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLC+ADVALIVFSTKGKLFEYSS 
Sbjct: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSSH 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           SSMEKILEKYERYSYAERPLA N DSE QVSWCQEYPKLA RLEI+QKNLRHYLGEELDP
Sbjct: 61  SSMEKILEKYERYSYAERPLASNRDSESQVSWCQEYPKLAARLEIVQKNLRHYLGEELDP 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           LNLRELQSLEQQLD+SLKRIR+R              KE+ELQEENR+LANKVKENE V 
Sbjct: 121 LNLRELQSLEQQLDSSLKRIRARKNQLMQESISKLHKKEKELQEENRKLANKVKENETVW 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHGRGSDEDETRATNVNNIQIPAWML 236
           VERGHC +L NL HN  I A PPP +PSLSIGVN HGRGSDEDETR T+ NNIQIPAWML
Sbjct: 181 VERGHC-ELTNLDHNHHILATPPP-LPSLSIGVNCHGRGSDEDETRPTSTNNIQIPAWML 240

[Close]

BLAST of Lsi07G009590 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-56
Identity = 128/245 (52.24%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRV+LKRIENKI+RQVTFSKRR GLLKKA EISVLC+A+V+LIVFS KGKLFEYSS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  SSMEKILEKYERYSYAERPL-APNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELD 120
           S MEK+LE+YERYSYAER L AP+     Q +W  EY +L  ++E++++N RHYLGEEL+
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 PLNLRELQSLEQQLDTSLKRIRS--------------RKERELQEENRQLANKVKENEKV 180
           P++L++LQ+LEQQL+T+LK IRS              RKE+E+QEEN  L  ++KE E +
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

Query: 181 L-VERGHCDDLPNLVHNQPIFAMPPP--------IIPSLSIGVNLHGRGSDEDETRATNV 222
           L  ++  C+ L   V + P    P P        I    S  +N+ G   +ED+T A   
Sbjct: 181 LRTKQTQCEQLNRSVDDVP---QPQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQT-AMRR 240

[Close]

BLAST of Lsi07G009590 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 215.7 bits (548), Expect = 4.0e-56
Identity = 122/208 (58.65%), Postives = 155/208 (74.52%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKI+RQVTFSKRRAGLLKKAHEISVLC+A+VAL+VFS KGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  SSMEKILEKYERYSYAERPL-APNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELD 120
           S MEKILE+YERYSYAER L AP  +S++  +W  EY +L  ++E++++N RHYLGE+L 
Sbjct: 61  SCMEKILERYERYSYAERQLIAP--ESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQ 120

Query: 121 PLNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKV 180
            ++ +ELQ+LEQQLDT+LK IR+R              KE+ +QE+N  L+ ++KE EK+
Sbjct: 121 AMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKI 180

Query: 181 LVERGHCDDLPNLVHNQPIFAMPPPIIP 194
           L  +    D  N  HN     MPPP+ P
Sbjct: 181 LRAQQEQWDQQNQGHN-----MPPPLPP 201

[Close]

BLAST of Lsi07G009590 vs. TAIR 10
Match: AT5G60910.1 (AGAMOUS-like 8 )

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-51
Identity = 120/246 (48.78%), Postives = 161/246 (65.45%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQLKRIENKI+RQVTFSKRR+GLLKKAHEISVLC+A+VALIVFS+KGKLFEYS+D
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60

Query: 61  SSMEKILEKYERYSYAERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELDP 120
           S ME+ILE+Y+RY Y+++ L     S+ + +W  E+ KL  R+E+++KN R+++GE+LD 
Sbjct: 61  SCMERILERYDRYLYSDKQLVGRDVSQSE-NWVLEHAKLKARVEVLEKNKRNFMGEDLDS 120

Query: 121 LNLRELQSLEQQLDTSLKRIRSR--------------KERELQEENRQLANKVKENEKVL 180
           L+L+ELQSLE QLD ++K IRSR              K++ LQ+ N  L  K+KE EK  
Sbjct: 121 LSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK-- 180

Query: 181 VERGHCDDLPNLVHNQPIFAMPPPIIPSLSIGVNLHGRGSDEDETRATNVNNIQIPAWML 233
            + G  +       N     +P   + S   G      G +   +  T  N++ +PAWML
Sbjct: 181 -KTGQQEGQLVQCSNSSSVLLPQYCVTSSRDGFVERVGGENGGASSLTEPNSL-LPAWML 240

[Close]

BLAST of Lsi07G009590 vs. TAIR 10
Match: AT3G30260.1 (AGAMOUS-like 79 )

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-43
Identity = 106/196 (54.08%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRVQL+RIENKI RQVTFSKRR GL+KKA EISVLC+A+VALIVFS KGKLFEYS+ 
Sbjct: 1   MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAG 60

Query: 61  SSMEKILEKYERYSYAERPL-APNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELD 120
           SSME+IL++YER +YA + +  PN DS+ + S   E  KL   ++++Q++LRH  GEE+D
Sbjct: 61  SSMERILDRYERSAYAGQDIPTPNLDSQGECS--TECSKLLRMIDVLQRSLRHLRGEEVD 120

Query: 121 PLNLRELQSLEQQLDTSLKRIRSRKERELQEENRQLANKVKE----NEKVLVERGHCDDL 180
            L++R+LQ +E QLDT+LK+ RSRK + + E   QL  K KE     +++  + G  +D 
Sbjct: 121 GLSIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGEREDF 180

Query: 181 --PNLVHNQPIFAMPP 190
              NL H+    A PP
Sbjct: 181 QTQNLSHDLASLATPP 194

[Close]

BLAST of Lsi07G009590 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-38
Identity = 87/169 (51.48%), Postives = 129/169 (76.33%), Query Frame = 0


Query: 1   MGRGRVQLKRIENKISRQVTFSKRRAGLLKKAHEISVLCEADVALIVFSTKGKLFEYSSD 60
           MGRGRV+LKRIENKI+RQVTF+KRR GLLKKA+E+SVLC+A+VALI+FS +GKL+E+ S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SSMEKILEKYERYSY-AERPLAPNGDSELQVSWCQEYPKLAVRLEIIQKNLRHYLGEELD 120
           SSM + LE+Y++ +Y A  P  P+ ++  ++S  QEY KL  R + +Q+  R+ LGE+L 
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRNLLGEDLG 120

Query: 121 PLNLRELQSLEQQLDTSLKRIRSRKERELQEENRQLANKVKENEKVLVE 169
           PL+ +EL+SLE+QLD+SLK+IR+ + + + ++     N ++  E++L E
Sbjct: 121 PLSTKELESLERQLDSSLKQIRALRTQFMLDQ----LNDLQSKERMLTE 165

The following BLAST results are available for this feature:

BLAST of Lsi07G009590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D7SMN6	1.2e-68	59.68	Agamous-like MADS-box protein FUL-L OS=Vitis vinifera OX=29760 GN=FULL PE=2 SV=1	[more]
Q42429	1.0e-56	52.00	Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum OX=4113 PE=2 SV=...	[more]
Q6E6S7	3.0e-56	58.06	Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1	[more]
D7KQR8	1.5e-55	53.69	Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN...	[more]
Q39081	1.5e-55	52.24	Transcription factor CAULIFLOWER OS=Arabidopsis thaliana OX=3702 GN=CAL PE=1 SV=...	[more]

BLAST of Lsi07G009590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GTY2	1.8e-104	83.53	truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1J006	5.2e-104	83.53	truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1GBW9	1.0e-96	79.84	truncated transcription factor CAULIFLOWER A-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1DNA2	3.1e-96	79.20	truncated transcription factor CAULIFLOWER A-like OS=Momordica charantia OX=3673...	[more]
A0A6J1KHN7	9.8e-95	79.05	truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Lsi07G009590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900501.1	5.3e-111	88.10	truncated transcription factor CAULIFLOWER A-like [Benincasa hispida]	[more]
XP_004137262.1	1.3e-104	83.79	truncated transcription factor CAULIFLOWER A [Cucumis sativus]	[more]
XP_023526590.1	2.2e-104	83.53	truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955438.1	3.7e-104	83.53	truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata]	[more]
XP_022980709.1	1.1e-103	83.53	truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima]	[more]

BLAST of Lsi07G009590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26310.1	1.0e-56	52.24	K-box region and MADS-box transcription factor family protein	[more]
AT1G69120.1	4.0e-56	58.65	K-box region and MADS-box transcription factor family protein	[more]
AT5G60910.1	1.3e-51	48.78	AGAMOUS-like 8	[more]
AT3G30260.1	1.0e-43	54.08	AGAMOUS-like 79	[more]
AT1G24260.1	3.7e-38	51.48	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..168
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..210
None	No IPR available	PANTHER	PTHR48019:SF44	BNAA09G02740D PROTEIN	coord: 1..210
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 77.18 coord: 38..59 score: 58.54 coord: 3..23 score: 67.35
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.6E-38 score: 144.0
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 3.5E-24 score: 84.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 31.314432
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..83 e-value: 2.1E-26 score: 93.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..80
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 89..164 e-value: 1.8E-19 score: 69.7
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 89..178 score: 12.913114
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 2.19103E-42 score: 136.528

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G009590.1	Lsi07G009590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding