Lsi07G009310 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTATTGTCAATAACAAGTCTCTGTGTTTTGGTGGCGGTGGCGGCGACGATGGTGCTTCTGACTGGAGCTCGTTTGGCCGATGCGGCGGACTGCAATCCTTCGGAGCTGAGCCCATGTCTTGATGCAATTAGGTCGTCGTCGGTGGCACCGTCGAGCAGTTGCTGCGTTAAGATGGAAGAGCAGGGGCCGTGCCTCTGCCAATACGCTAAGATTCCAAAGTTGGAGCCTTTCGTTGCCGGCGGGCAACGGGTTGCCGCTGCTTGCGGCGTCACGCTTCCTGTGTGTTAG ATGAAGTTATTGTCAATAACAAGTCTCTGTGTTTTGGTGGCGGTGGCGGCGACGATGGTGCTTCTGACTGGAGCTCGTTTGGCCGATGCGGCGGACTGCAATCCTTCGGAGCTGAGCCCATGTCTTGATGCAATTAGGTCGTCGTCGGTGGCACCGTCGAGCAGTTGCTGCGTTAAGATGGAAGAGCAGGGGCCGTGCCTCTGCCAATACGCTAAGATTCCAAAGTTGGAGCCTTTCGTTGCCGGCGGGCAACGGGTTGCCGCTGCTTGCGGCGTCACGCTTCCTGTGTGTTAG ATGAAGTTATTGTCAATAACAAGTCTCTGTGTTTTGGTGGCGGTGGCGGCGACGATGGTGCTTCTGACTGGAGCTCGTTTGGCCGATGCGGCGGACTGCAATCCTTCGGAGCTGAGCCCATGTCTTGATGCAATTAGGTCGTCGTCGGTGGCACCGTCGAGCAGTTGCTGCGTTAAGATGGAAGAGCAGGGGCCGTGCCTCTGCCAATACGCTAAGATTCCAAAGTTGGAGCCTTTCGTTGCCGGCGGGCAACGGGTTGCCGCTGCTTGCGGCGTCACGCTTCCTGTGTGTTAG MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC Homology
BLAST of Lsi07G009310 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 9.2e-12 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lsi07G009310 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.3e-09 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of Lsi07G009310 vs. ExPASy TrEMBL
Match: A0A0A0L0Z5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G135200 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 5.4e-31 Identity = 72/97 (74.23%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Lsi07G009310 vs. ExPASy TrEMBL
Match: A0A6J1GV37 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457740 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26 Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Lsi07G009310 vs. ExPASy TrEMBL
Match: A0A5A7VA95 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3068G00070 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 7.5e-25 Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of Lsi07G009310 vs. ExPASy TrEMBL
Match: A0A6J1E135 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111024980 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.1e-15 Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of Lsi07G009310 vs. ExPASy TrEMBL
Match: A0A6J1CQB8 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111013188 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14 Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 0
BLAST of Lsi07G009310 vs. NCBI nr
Match: KAG6581743.1 (hypothetical protein SDJN03_21745, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 128.3 bits (321), Expect = 3.7e-26 Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Lsi07G009310 vs. NCBI nr
Match: XP_022955891.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata]) HSP 1 Score: 128.3 bits (321), Expect = 3.7e-26 Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Lsi07G009310 vs. NCBI nr
Match: XP_023527040.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.2 bits (313), Expect = 3.1e-25 Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of Lsi07G009310 vs. NCBI nr
Match: KAA0064150.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK16011.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 122.9 bits (307), Expect = 1.6e-24 Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of Lsi07G009310 vs. NCBI nr
Match: KAE8648023.1 (hypothetical protein Csa_005844, partial [Cucumis sativus]) HSP 1 Score: 107.8 bits (268), Expect = 5.2e-20 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Lsi07G009310 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 7.5e-09 Identity = 30/74 (40.54%), Postives = 41/74 (55.41%), Query Frame = 0
BLAST of Lsi07G009310 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 1.3e-08 Identity = 29/86 (33.72%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of Lsi07G009310 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08 Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of Lsi07G009310 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 6.3e-08 Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 0
BLAST of Lsi07G009310 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06 Identity = 32/103 (31.07%), Postives = 48/103 (46.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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