Lsi07G009300 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAAACTTCATGGCACAGGCCTTTGCCTTCTTGTGGTGGTGGCGATTCTCACCGGAGTTCGTCTCGGCAATGCGGTGACTTGCAATCCCATGGAGCTGAGCCCTTGTGTTGCTGCAATCACATCATCAGCAGCGCCTACAGCTGCTTGCTGTCAGAAGTTGAAGCAGCAAGAATCTTGCTATTGTGGGTATCTAAAAGATCCAAAGTTCAAACCTTATGTACAATCTCCTCGCGTTAGAGCCGTTGCTTCCATCTGTCATGTCCATGTCCCTAGATGCTAG ATGAGGAAACTTCATGGCACAGGCCTTTGCCTTCTTGTGGTGGTGGCGATTCTCACCGGAGTTCGTCTCGGCAATGCGGTGACTTGCAATCCCATGGAGCTGAGCCCTTGTGTTGCTGCAATCACATCATCAGCAGCGCCTACAGCTGCTTGCTGTCAGAAGTTGAAGCAGCAAGAATCTTGCTATTGTGGGTATCTAAAAGATCCAAAGTTCAAACCTTATGTACAATCTCCTCGCGTTAGAGCCGTTGCTTCCATCTGTCATGTCCATGTCCCTAGATGCTAG ATGAGGAAACTTCATGGCACAGGCCTTTGCCTTCTTGTGGTGGTGGCGATTCTCACCGGAGTTCGTCTCGGCAATGCGGTGACTTGCAATCCCATGGAGCTGAGCCCTTGTGTTGCTGCAATCACATCATCAGCAGCGCCTACAGCTGCTTGCTGTCAGAAGTTGAAGCAGCAAGAATCTTGCTATTGTGGGTATCTAAAAGATCCAAAGTTCAAACCTTATGTACAATCTCCTCGCGTTAGAGCCGTTGCTTCCATCTGTCATGTCCATGTCCCTAGATGCTAG MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC Homology
BLAST of Lsi07G009300 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.0e-16 Identity = 44/94 (46.81%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-15 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-15 Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.7e-13 Identity = 33/94 (35.11%), Postives = 49/94 (52.13%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 2.3e-12 Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy TrEMBL
Match: A0A0A0KW80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141210 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32 Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy TrEMBL
Match: A0A5D3BT00 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00780 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.6e-32 Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy TrEMBL
Match: A0A6J1E135 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111024980 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 6.2e-24 Identity = 60/98 (61.22%), Postives = 71/98 (72.45%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy TrEMBL
Match: A0A2C9WJN9 (AAI domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G112700 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.9e-20 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of Lsi07G009300 vs. ExPASy TrEMBL
Match: A0A0A0KW09 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141230 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20 Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of Lsi07G009300 vs. NCBI nr
Match: KAG6581741.1 (hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581744.1 hypothetical protein SDJN03_21746, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32 Identity = 69/95 (72.63%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Lsi07G009300 vs. NCBI nr
Match: KGN53813.1 (hypothetical protein Csa_015036 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 2.6e-32 Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Lsi07G009300 vs. NCBI nr
Match: KAA0064158.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02871.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 148.3 bits (373), Expect = 3.4e-32 Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of Lsi07G009300 vs. NCBI nr
Match: XP_022158506.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23 Identity = 60/98 (61.22%), Postives = 71/98 (72.45%), Query Frame = 0
BLAST of Lsi07G009300 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida]) HSP 1 Score: 112.1 bits (279), Expect = 2.7e-21 Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Lsi07G009300 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 88.2 bits (217), Expect = 3.8e-18 Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Lsi07G009300 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 84.7 bits (208), Expect = 4.2e-17 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 0
BLAST of Lsi07G009300 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 77.8 bits (190), Expect = 5.2e-15 Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of Lsi07G009300 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14 Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 0
BLAST of Lsi07G009300 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12 Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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