Lsi07G007330 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAGTCACGTGGATATCATATGCTCATAGTCATCAATCTTCTCCATTTGTCAAACCTTCGCAACTAAGCAAATCAATGGCTGAATTTCCCCTTACAACTCTCAGCCCTTTCTAGAATGAATCCCTTTCCCATTCCCTTCCCACAGTTTGAATGAATAAACCTTCCCCATATATCTCTCTCTCTTTCCATTTGATTACGCGTCTTTCCAATTGGATTACTCACTTTCTCATTTCCTCTCAACCACTGTACCCTTCTTTCTTTAATCAATTTCTTGTTTTTCTATTCCTTTTTCTTCCTTTCAATTCAGCCTTTTTCATCTTCAACACGCAATCTCCTCTTCCTTTCTTCGAAATTTCCTTTCCTTTACCTAATACCCATCTTATTTAACTCCATCTCTCTCTTCCCCACTTCTTCATTTCTCCCTTCTACTGTCTGCAACTCTTTTGTTCATTTTTCCTATCTGGGTTTTTATTTTTTTTATTTTTCTGACTTCTGAGGTGGGTTTGTTCAGAAATGGAGAGTAACCCTCAATCGTTTAGGCAATTCAGCGACCAGCTTCGGGTGCAAACTGGGAATCTTGCCAATCTGTCGCTCAACGATTCTATCTGGAGTAACTCGTATGTCTCGAAGAGGCCTGAGGAGAGGAGGAATTTCGATGTAAGAAATGGTGGAGAGGTAAATTCGTTGAATAATTTTAAGCCTAAACTGTCTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGTGTTGCTTCTGATCTTAATAATTGGACCAACACCAGCAGTAGTAGTAATTTGAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTCAAGCCAAAGGGTTCTGATTTTAATGCCTTCAATGATGGGTGGAAGCTTAATTCTGCTAATATGGGGGTGGATCCTGTGATTGGAGGAGCCCAAAAGGGTATTAATGGAGGGTTTAACAAAGGGATTTACTCCAAAATTGGGAATTTTAACAATAACAATTTTGTAAATCTGAAGAACTACAAGAACACTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGACTGGGAAGAAGAACAGTAACAAGAAGAACAGTGGTGAAAATATCAATGATAATAAGGAAACTAATAAGAATGCTTTGGACAAGAGGTTCAAGACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACTATGCAAGAGAATCTCAAGAGGCAGCTTTTTGGTAAGTTTCCCCTTCCCTTTCTTCAATTTTTATGATCCGACTGCTTTCCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCATAGCTTTGATGTATGTTTGCCTTCTCCCTTGTCTAGGAAGTTCTAAGATTTTCTATTGTTTAATCACTGTTTTAGGTTTGCCTCCAAGATACAGAGATTCAGTCAGGGCCATAACTCCTGGGTTGCCTATTTTCCTTTACAACTATTCTACTCACCAACTCCATGGAATCTTTGAGGTGCGACTCCTTTCCATTAGATTCAATTCAATTCTGCTAGATCCATGGCTTCAATAGGGAGCTTTAATCTGTTAATATCAATACCTGTTTGTTTTGTTTACTTATTTTGAAACTGTGAATCATCTTTCCAGGCTGCAAGCTTTGGAGGAACAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTGCCGGCGAATCTCGTTTCCCGGCGCAGGTAACGTTCATGTTCTTGTTGGCTGAAACCTACTTTATCAAAATTTTCACTTCCATAGATCTAACCTGAAAGTCAACTCTTTGAAACAGGTAAGAATTGTGACTAGGAAGATATGCGATCCACTGGAAGAGGACTCTTTCAGACCAATTCTTCACCATTATGATGGCCCCAAGTTTCGCCTTGAACTCAACATTCCAGAGGTAATTACAGACAGTTCAAACAATTTGATCTTGATCCTCCAAGTTCATTATAGCTGGATTAACCAAACAAAACTATCAATTCTGTAGCTAAATGAAGAACTCAACAAATCTAATATTGATTCTGAAAATTTTGCAGGCACTTTCTCTGCTGGATATATTTGGAGAACAATCCTCTTGAACAGCAGAACATATGCAGTCATACACTAGACAGAGACGTATACAGCACACGTACACAAATCAATCGCTAGTATTGCCAACGTATGACGACAACGACAACGACGGTCGAAAGAATGCATTGGTGAGTTTTGGGAGTTTGGAAGAATTGTCATCATGTCCTCTTTAAGTTATAAATATGTTTGCTCTTTGTCTGGTGTTGGCTAGTTGAGTTGTGTATGAAAAAGTTCACAAACAGTATGGAAAAACTTTTAACAGTAATGTAACAATAAATATGTATTGTATTGTTTAAGTTCTGGAAACTGTATGGTTATTATATTATAGGAGATGAACTTGTGTTCGTCCTAAAGTTGTAATTTGATCTGTAATGTTTCAAAAAGGGTCAATTAAATCCTTGTTTCAGAAAGCTTCTGAAATGGAATAACAGAACAATGAAGAGAGTATTGAATTGTGTTACATATTATGATGCAGCAGTCTTTTAAGGATTTTTCATTTTTGGGAGAATTGATATTGGAGTATTTTGGTATTATATAATGATTATCATAGGTGTTCTTGGATCTCTATTATTTGGATTATCTACTGTTTATCATTTCTTAAGGTATCTAATATGACATGCTTTGCACTAATAGCTAGCAAAATGTCATTGTCAATTAGTGATAGACAGTGATAGAAACGGATAGACTATTATCATTCATTACAGTTAAAAAATATTTTCAATAGTATTGTCATTTAAAACTATTTTTTTTTCCAAGATCATCTCATTATTTCGTTCATTAATATCAAATGGTATTATTTTAAAAATCTTAGTCAACCGTTGTTGTTCTCGCCTTCTTTGATATTGATAGAAATGGTTGGGATTTTTTCCCCAAAATTTGATTTTTCCCTATCGAAATATGTGGCAGACAATTGTTGGTTTGAATGGGTTTGATTTCTGAGCAATTTTATTTATTTATTTATTTTAAATTACAAGTTGA GGGAGTCACGTGGATATCATATGCTCATAGTCATCAATCTTCTCCATTTGTCAAACCTTCGCAACTAAGCAAATCAATGGCTGAATTTCCCCTTACAACTCTCAGCCCTTTCTAGAATGAATCCCTTTCCCATTCCCTTCCCACAGTTTGAATGAATAAACCTTCCCCATATATCTCTCTCTCTTTCCATTTGATTACGCGTCTTTCCAATTGGATTACTCACTTTCTCATTTCCTCTCAACCACTGTACCCTTCTTTCTTTAATCAATTTCTTGTTTTTCTATTCCTTTTTCTTCCTTTCAATTCAGCCTTTTTCATCTTCAACACGCAATCTCCTCTTCCTTTCTTCGAAATTTCCTTTCCTTTACCTAATACCCATCTTATTTAACTCCATCTCTCTCTTCCCCACTTCTTCATTTCTCCCTTCTACTGTCTGCAACTCTTTTGTTCATTTTTCCTATCTGGGTTTTTATTTTTTTTATTTTTCTGACTTCTGAGGTGGGTTTGTTCAGAAATGGAGAGTAACCCTCAATCGTTTAGGCAATTCAGCGACCAGCTTCGGGTGCAAACTGGGAATCTTGCCAATCTGTCGCTCAACGATTCTATCTGGAGTAACTCGTATGTCTCGAAGAGGCCTGAGGAGAGGAGGAATTTCGATGTAAGAAATGGTGGAGAGGTAAATTCGTTGAATAATTTTAAGCCTAAACTGTCTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGTGTTGCTTCTGATCTTAATAATTGGACCAACACCAGCAGTAGTAGTAATTTGAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTCAAGCCAAAGGGTTCTGATTTTAATGCCTTCAATGATGGGTGGAAGCTTAATTCTGCTAATATGGGGGTGGATCCTGTGATTGGAGGAGCCCAAAAGGGTATTAATGGAGGGTTTAACAAAGGGATTTACTCCAAAATTGGGAATTTTAACAATAACAATTTTGTAAATCTGAAGAACTACAAGAACACTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGACTGGGAAGAAGAACAGTAACAAGAAGAACAGTGGTGAAAATATCAATGATAATAAGGAAACTAATAAGAATGCTTTGGACAAGAGGTTCAAGACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACTATGCAAGAGAATCTCAAGAGGCAGCTTTTTGGTTTGCCTCCAAGATACAGAGATTCAGTCAGGGCCATAACTCCTGGGTTGCCTATTTTCCTTTACAACTATTCTACTCACCAACTCCATGGAATCTTTGAGGCTGCAAGCTTTGGAGGAACAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTGCCGGCGAATCTCGTTTCCCGGCGCAGGTAAGAATTGTGACTAGGAAGATATGCGATCCACTGGAAGAGGACTCTTTCAGACCAATTCTTCACCATTATGATGGCCCCAAGTTTCGCCTTGAACTCAACATTCCAGAGGCACTTTCTCTGCTGGATATATTTGGAGAACAATCCTCTTGAACAGCAGAACATATGCAGTCATACACTAGACAGAGACGTATACAGCACACGTACACAAATCAATCGCTAGTATTGCCAACGTATGACGACAACGACAACGACGGTCGAAAGAATGCATTGGTGAGTTTTGGGAGTTTGGAAGAATTGTCATCATGTCCTCTTTAAGTTATAAATATGTTTGCTCTTTGTCTGGTGTTGGCTAGTTGAGTTGTGTATGAAAAAGTTCACAAACAGTATGGAAAAACTTTTAACAGTAATGTAACAATAAATATGTATTGTATTGTTTAAGTTCTGGAAACTGTATGGTTATTATATTATAGGAGATGAACTTGTGTTCGTCCTAAAGTTGTAATTTGATCTGTAATGTTTCAAAAAGGGTCAATTAAATCCTTGTTTCAGAAAGCTTCTGAAATGGAATAACAGAACAATGAAGAGAGTATTGAATTGTGTTACATATTATGATGCAGCAGTCTTTTAAGGATTTTTCATTTTTGGGAGAATTGATATTGGAGTATTTTGGTATTATATAATGATTATCATAGGTGTTCTTGGATCTCTATTATTTGGATTATCTACTGTTTATCATTTCTTAAGGTATCTAATATGACATGCTTTGCACTAATAGCTAGCAAAATGTCATTGTCAATTAGTGATAGACAGTGATAGAAACGGATAGACTATTATCATTCATTACAGTTAAAAAATATTTTCAATAGTATTGTCATTTAAAACTATTTTTTTTTCCAAGATCATCTCATTATTTCGTTCATTAATATCAAATGGTATTATTTTAAAAATCTTAGTCAACCGTTGTTGTTCTCGCCTTCTTTGATATTGATAGAAATGGTTGGGATTTTTTCCCCAAAATTTGATTTTTCCCTATCGAAATATGTGGCAGACAATTGTTGGTTTGAATGGGTTTGATTTCTGAGCAATTTTATTTATTTATTTATTTTAAATTACAAGTTGA ATGGAGAGTAACCCTCAATCGTTTAGGCAATTCAGCGACCAGCTTCGGGTGCAAACTGGGAATCTTGCCAATCTGTCGCTCAACGATTCTATCTGGAGTAACTCGTATGTCTCGAAGAGGCCTGAGGAGAGGAGGAATTTCGATGTAAGAAATGGTGGAGAGGTAAATTCGTTGAATAATTTTAAGCCTAAACTGTCTGATTCTGATGTCAATCGGTTCAATGATGGATGGAATAGTTTTAAGCCGAGTGTTGCTTCTGATCTTAATAATTGGACCAACACCAGCAGTAGTAGTAATTTGAGTTCAACTGGGTATGAAAAGAATGCACTCAATGTGTTTGATAATGGGTGGAATAGTTTCAAGCCAAAGGGTTCTGATTTTAATGCCTTCAATGATGGGTGGAAGCTTAATTCTGCTAATATGGGGGTGGATCCTGTGATTGGAGGAGCCCAAAAGGGTATTAATGGAGGGTTTAACAAAGGGATTTACTCCAAAATTGGGAATTTTAACAATAACAATTTTGTAAATCTGAAGAACTACAAGAACACTGGGAAGGTTGAAGAAGAAAATGGAGGAAAGACTGGGAAGAAGAACAGTAACAAGAAGAACAGTGGTGAAAATATCAATGATAATAAGGAAACTAATAAGAATGCTTTGGACAAGAGGTTCAAGACCCTTCCCCCATCTGAGTCTTTGCCCAGAAATGAAACAATTGGTGGATATATCTTTGTCTGCAACAATGATACTATGCAAGAGAATCTCAAGAGGCAGCTTTTTGGTTTGCCTCCAAGATACAGAGATTCAGTCAGGGCCATAACTCCTGGGTTGCCTATTTTCCTTTACAACTATTCTACTCACCAACTCCATGGAATCTTTGAGGCTGCAAGCTTTGGAGGAACAAACATTGATCCAACTGCCTGGGAAGACAAGAAAACTGCCGGCGAATCTCGTTTCCCGGCGCAGGTAAGAATTGTGACTAGGAAGATATGCGATCCACTGGAAGAGGACTCTTTCAGACCAATTCTTCACCATTATGATGGCCCCAAGTTTCGCCTTGAACTCAACATTCCAGAGGCACTTTCTCTGCTGGATATATTTGGAGAACAATCCTCTTGA MESNPQSFRQFSDQLRVQTGNLANLSLNDSIWSNSYVSKRPEERRNFDVRNGGEVNSLNNFKPKLSDSDVNRFNDGWNSFKPSVASDLNNWTNTSSSSNLSSTGYEKNALNVFDNGWNSFKPKGSDFNAFNDGWKLNSANMGVDPVIGGAQKGINGGFNKGIYSKIGNFNNNNFVNLKNYKNTGKVEEENGGKTGKKNSNKKNSGENINDNKETNKNALDKRFKTLPPSESLPRNETIGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPIFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKTAGESRFPAQVRIVTRKICDPLEEDSFRPILHHYDGPKFRLELNIPEALSLLDIFGEQSS Homology
BLAST of Lsi07G007330 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 3.3e-110 Identity = 227/377 (60.21%), Postives = 261/377 (69.23%), Query Frame = 0
BLAST of Lsi07G007330 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 2.2e-101 Identity = 226/394 (57.36%), Postives = 264/394 (67.01%), Query Frame = 0
BLAST of Lsi07G007330 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 9.0e-100 Identity = 215/372 (57.80%), Postives = 256/372 (68.82%), Query Frame = 0
BLAST of Lsi07G007330 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 3.1e-84 Identity = 151/184 (82.07%), Postives = 167/184 (90.76%), Query Frame = 0
BLAST of Lsi07G007330 vs. ExPASy TrEMBL
Match: A0A5D3CZ33 (Putative cyclin-dependent serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003540 PE=4 SV=1) HSP 1 Score: 715.3 bits (1845), Expect = 1.3e-202 Identity = 353/371 (95.15%), Postives = 363/371 (97.84%), Query Frame = 0
BLAST of Lsi07G007330 vs. ExPASy TrEMBL
Match: A0A1S3BTF4 (DCD domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103493079 PE=4 SV=1) HSP 1 Score: 715.3 bits (1845), Expect = 1.3e-202 Identity = 353/371 (95.15%), Postives = 363/371 (97.84%), Query Frame = 0
BLAST of Lsi07G007330 vs. ExPASy TrEMBL
Match: A0A6J1FQF7 (DCD domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111447293 PE=4 SV=1) HSP 1 Score: 679.9 bits (1753), Expect = 6.1e-192 Identity = 334/372 (89.78%), Postives = 359/372 (96.51%), Query Frame = 0
BLAST of Lsi07G007330 vs. ExPASy TrEMBL
Match: A0A6J1JD73 (uncharacterized protein MAL13P1.336-like OS=Cucurbita maxima OX=3661 GN=LOC111483419 PE=4 SV=1) HSP 1 Score: 673.7 bits (1737), Expect = 4.4e-190 Identity = 334/370 (90.27%), Postives = 348/370 (94.05%), Query Frame = 0
BLAST of Lsi07G007330 vs. ExPASy TrEMBL
Match: A0A6J1C493 (B2 protein OS=Momordica charantia OX=3673 GN=LOC111008353 PE=4 SV=1) HSP 1 Score: 672.5 bits (1734), Expect = 9.8e-190 Identity = 339/373 (90.88%), Postives = 357/373 (95.71%), Query Frame = 0
BLAST of Lsi07G007330 vs. NCBI nr
Match: XP_038900602.1 (DCD domain-containing protein NRP-B [Benincasa hispida]) HSP 1 Score: 723.4 bits (1866), Expect = 1.0e-204 Identity = 358/371 (96.50%), Postives = 364/371 (98.11%), Query Frame = 0
BLAST of Lsi07G007330 vs. NCBI nr
Match: XP_004148988.1 (uncharacterized protein DDB_G0283357 [Cucumis sativus] >KGN53433.2 hypothetical protein Csa_015083 [Cucumis sativus]) HSP 1 Score: 718.8 bits (1854), Expect = 2.5e-203 Identity = 356/371 (95.96%), Postives = 364/371 (98.11%), Query Frame = 0
BLAST of Lsi07G007330 vs. NCBI nr
Match: XP_008451926.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0044932.1 putative cyclin-dependent serine/threonine-protein kinase [Cucumis melo var. makuwa] >TYK16538.1 putative cyclin-dependent serine/threonine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 715.3 bits (1845), Expect = 2.7e-202 Identity = 353/371 (95.15%), Postives = 363/371 (97.84%), Query Frame = 0
BLAST of Lsi07G007330 vs. NCBI nr
Match: KAG7031145.1 (hypothetical protein SDJN02_05184 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 681.0 bits (1756), Expect = 5.7e-192 Identity = 335/372 (90.05%), Postives = 359/372 (96.51%), Query Frame = 0
BLAST of Lsi07G007330 vs. NCBI nr
Match: XP_023527841.1 (uncharacterized protein DDB_G0283357 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 680.2 bits (1754), Expect = 9.7e-192 Identity = 334/372 (89.78%), Postives = 360/372 (96.77%), Query Frame = 0
BLAST of Lsi07G007330 vs. TAIR 10
Match: AT5G42050.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 365.2 bits (936), Expect = 6.4e-101 Identity = 215/372 (57.80%), Postives = 256/372 (68.82%), Query Frame = 0
BLAST of Lsi07G007330 vs. TAIR 10
Match: AT3G27090.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 270.0 bits (689), Expect = 2.8e-72 Identity = 159/295 (53.90%), Postives = 189/295 (64.07%), Query Frame = 0
BLAST of Lsi07G007330 vs. TAIR 10
Match: AT5G01660.1 (CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). ) HSP 1 Score: 106.7 bits (265), Expect = 4.1e-23 Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = 0
BLAST of Lsi07G007330 vs. TAIR 10
Match: AT3G11000.1 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-22 Identity = 55/129 (42.64%), Postives = 75/129 (58.14%), Query Frame = 0
BLAST of Lsi07G007330 vs. TAIR 10
Match: AT3G11000.2 (DCD (Development and Cell Death) domain protein ) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-22 Identity = 55/129 (42.64%), Postives = 75/129 (58.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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