Lsi07G007320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G007320
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr07: 7902257 .. 7902844 (+)
RNA-Seq Expression	Lsi07G007320
Synteny	Lsi07G007320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAAAAGCCCATCAGAATTTTAACCGATTCCGGCAACATAATCAGCTTCCATGGCCCTAAACAAGTCCATCAAATCCTCAACAACTATCCTCCCGGCGTCTATGGCGTTTTCCGCCGCCCCAATCTCTCTTCTCCCTTACCCATCTCCGAGCCCCTCGACGCCGGAAAATCCTACTTTCTCCTCCCTCTTTCCAGAGCCGCCGATAAAGTTCAGAGCGACGATGGAGAGCAGCCGCCGTCGAAGGATCTGGGAAGTGGGTCGGGTCTGGAAGTGCTTCCGGCGGGTGGGAACGGCGTTTGGAGAGTCAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGAAGGGAACACAGAGGCCTTGATTGAGAGGATAAGGGCGGCGGCGGCGGTGCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGACGTGGGGGAATTGGTTCAAGTTTTTTCCAATTGATGTTGGAAACAATAATAATAAAGCACAAATCAAGGATTTTGATTCTGGAAATGGTTGTTTATATGCAACATAA

mRNA sequence

ATGGGGAACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAAAAGCCCATCAGAATTTTAACCGATTCCGGCAACATAATCAGCTTCCATGGCCCTAAACAAGTCCATCAAATCCTCAACAACTATCCTCCCGGCGTCTATGGCGTTTTCCGCCGCCCCAATCTCTCTTCTCCCTTACCCATCTCCGAGCCCCTCGACGCCGGAAAATCCTACTTTCTCCTCCCTCTTTCCAGAGCCGCCGATAAAGTTCAGAGCGACGATGGAGAGCAGCCGCCGTCGAAGGATCTGGGAAGTGGGTCGGGTCTGGAAGTGCTTCCGGCGGGTGGGAACGGCGTTTGGAGAGTCAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGAAGGGAACACAGAGGCCTTGATTGAGAGGATAAGGGCGGCGGCGGCGGTGCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGACGTGGGGGAATTGGTTCAAGTTTTTTCCAATTGATGTTGGAAACAATAATAATAAAGCACAAATCAAGGATTTTGATTCTGGAAATGGTTGTTTATATGCAACATAA

Coding sequence (CDS)

ATGGGGAACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAAAAGCCCATCAGAATTTTAACCGATTCCGGCAACATAATCAGCTTCCATGGCCCTAAACAAGTCCATCAAATCCTCAACAACTATCCTCCCGGCGTCTATGGCGTTTTCCGCCGCCCCAATCTCTCTTCTCCCTTACCCATCTCCGAGCCCCTCGACGCCGGAAAATCCTACTTTCTCCTCCCTCTTTCCAGAGCCGCCGATAAAGTTCAGAGCGACGATGGAGAGCAGCCGCCGTCGAAGGATCTGGGAAGTGGGTCGGGTCTGGAAGTGCTTCCGGCGGGTGGGAACGGCGTTTGGAGAGTCAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGAAGGGAACACAGAGGCCTTGATTGAGAGGATAAGGGCGGCGGCGGCGGTGCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGACGTGGGGGAATTGGTTCAAGTTTTTTCCAATTGATGTTGGAAACAATAATAATAAAGCACAAATCAAGGATTTTGATTCTGGAAATGGTTGTTTATATGCAACATAA

Protein sequence

MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAAAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNKAQIKDFDSGNGCLYAT

Homology

[Close]

BLAST of Lsi07G007320 vs. ExPASy TrEMBL
Match: A0A6J1J4V0 (uncharacterized protein LOC111483432 OS=Cucurbita maxima OX=3661 GN=LOC111483432 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.1e-89
Identity = 167/198 (84.34%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
           ISEPLDAGKSYFLLPLSRAA+K +SD      + DL +GSGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISEPLDAGKSYFLLPLSRAAEKERSD-----AAGDLRTGSGLEVLPTGGDGIWRVKLVID 120

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAE+GNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KFFPIDVG NN
Sbjct: 121 TKQLGEILAEDGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFFPIDVG-NN 180

Query: 181 NKAQIKDFDSGNGCLYAT 196
           NKAQ+KDF SGNGCLYAT
Sbjct: 181 NKAQMKDFHSGNGCLYAT 192

[Close]

BLAST of Lsi07G007320 vs. ExPASy TrEMBL
Match: A0A6J1EZE8 (uncharacterized protein LOC111437614 OS=Cucurbita moschata OX=3662 GN=LOC111437614 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.5e-88
Identity = 168/198 (84.85%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
           ISE LDAGKSYFLLPLSRA +K +SD  E     DL SGSGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISELLDAGKSYFLLPLSRAVEKERSDAAE-----DLRSGSGLEVLPTGGDGIWRVKLVID 120

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAEEGNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KF PIDVG NN
Sbjct: 121 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVG-NN 180

Query: 181 NKAQIKDFDSGNGCLYAT 196
           NKAQIKDF SGNGCLYAT
Sbjct: 181 NKAQIKDFHSGNGCLYAT 192

[Close]

BLAST of Lsi07G007320 vs. ExPASy TrEMBL
Match: A0A0A0KYF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052720 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.2e-87
Identity = 161/189 (85.19%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKGMAVDCEKPIRILTDSG+II+FHGPKQVHQILNNYPPG+YGVFRRPNLSSPLP
Sbjct: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
           +SEPLDAGKSYFLLPLS++ +  +S     PPSKD+GS SGLEVLPAGGNGVWRVKLVID
Sbjct: 77  VSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVID 136

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAEEGNTEALIER+RAA   AAVQSPRRGKIGGWKP WGNWFKFFPIDVG N+
Sbjct: 137 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVG-NS 196

Query: 181 NKAQIKDFD 187
           NKAQ+K F+
Sbjct: 197 NKAQMKVFN 204

[Close]

BLAST of Lsi07G007320 vs. ExPASy TrEMBL
Match: A0A5A7TTS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003550 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 159/190 (83.68%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKGMAVDC KPIRILTDSG+II+FHGPKQVHQILNNYPPG+YGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGMAVDCVKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
            SEPLDAGKSYFLLPLS+  +  +S      PSKDLGS SGLEVLPA GNGVWRVKLVID
Sbjct: 61  FSEPLDAGKSYFLLPLSQPTNDTESSP-PPLPSKDLGSESGLEVLPASGNGVWRVKLVID 120

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAEEGNTEALIERIRAA   AAVQSPRRGKI GWKP WGNW KFFP+D G NN
Sbjct: 121 TKQLGEILAEEGNTEALIERIRAAAATAAVQSPRRGKIVGWKPMWGNWLKFFPMDFG-NN 180

Query: 181 NKAQIKDFDS 188
           NKAQIK+F+S
Sbjct: 181 NKAQIKEFNS 188

[Close]

BLAST of Lsi07G007320 vs. ExPASy TrEMBL
Match: A0A1S3BTS2 (uncharacterized protein LOC103493080 OS=Cucumis melo OX=3656 GN=LOC103493080 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 159/190 (83.68%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKGMAVDC KPIRILTDSG+II+FHGPKQVHQILNNYPPG+YGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGMAVDCVKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
            SEPLDAGKSYFLLPLS+  +  +S      PSKDLGS SGLEVLPA GNGVWRVKLVID
Sbjct: 61  FSEPLDAGKSYFLLPLSQPTNDTESSP-PPLPSKDLGSESGLEVLPASGNGVWRVKLVID 120

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAEEGNTEALIERIRAA   AAVQSPRRGKI GWKP WGNW KFFP+D G NN
Sbjct: 121 TKQLGEILAEEGNTEALIERIRAAAATAAVQSPRRGKIVGWKPMWGNWLKFFPMDFG-NN 180

Query: 181 NKAQIKDFDS 188
           NKAQIK+F+S
Sbjct: 181 NKAQIKEFNS 188

[Close]

BLAST of Lsi07G007320 vs. NCBI nr
Match: XP_038907067.1 (uncharacterized protein LOC120092893 [Benincasa hispida])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 177/194 (91.24%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKGM VDCEKPIRILTDSGNII+FHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGMTVDCEKPIRILTDSGNIINFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGE-QPPSKDLGSGSGLEVLPAGGNGVWRVKLVI 120
           ISEPLDAGKSYFLLPLSR ADKVQ+DDGE  PP K+LGSGSGLEVLPAGGNGVWRVKLVI
Sbjct: 61  ISEPLDAGKSYFLLPLSRPADKVQADDGEPPPPPKNLGSGSGLEVLPAGGNGVWRVKLVI 120

Query: 121 DTKQLGEILAEEGNTEALIERIRAAAAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNNNK 180
           DTKQLGEILAEEGNTEALIER+RAAAA +SP+RGKIGGWK TWGN  KFFPIDVG NNNK
Sbjct: 121 DTKQLGEILAEEGNTEALIERMRAAAA-ESPQRGKIGGWKATWGNLLKFFPIDVG-NNNK 180

Query: 181 AQIKDFDSGNGCLY 194
           AQIKDFD+GNGCLY
Sbjct: 181 AQIKDFDAGNGCLY 192

[Close]

BLAST of Lsi07G007320 vs. NCBI nr
Match: XP_023522023.1 (uncharacterized protein LOC111785895 [Cucurbita pepo subsp. pepo] >XP_023552871.1 uncharacterized protein LOC111810396 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 168/198 (84.85%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
           ISEPLDAGKSYFLLPLSRAA+K +SD  E     DL +GSGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISEPLDAGKSYFLLPLSRAAEKERSDAAE-----DLRTGSGLEVLPTGGDGIWRVKLVID 120

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAEEGNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KF PIDVG N+
Sbjct: 121 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVG-NH 180

Query: 181 NKAQIKDFDSGNGCLYAT 196
           NKAQIKDF SGNGCLYAT
Sbjct: 181 NKAQIKDFHSGNGCLYAT 192

[Close]

BLAST of Lsi07G007320 vs. NCBI nr
Match: XP_022985422.1 (uncharacterized protein LOC111483432 [Cucurbita maxima])

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 167/198 (84.34%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
           ISEPLDAGKSYFLLPLSRAA+K +SD      + DL +GSGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISEPLDAGKSYFLLPLSRAAEKERSD-----AAGDLRTGSGLEVLPTGGDGIWRVKLVID 120

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAE+GNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KFFPIDVG NN
Sbjct: 121 TKQLGEILAEDGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFFPIDVG-NN 180

Query: 181 NKAQIKDFDSGNGCLYAT 196
           NKAQ+KDF SGNGCLYAT
Sbjct: 181 NKAQMKDFHSGNGCLYAT 192

[Close]

BLAST of Lsi07G007320 vs. NCBI nr
Match: KAG6577133.1 (hypothetical protein SDJN03_24707, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015129.1 hypothetical protein SDJN02_22762, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88
Identity = 169/198 (85.35%), Postives = 176/198 (88.89%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
           ISE LDAGKSYFLLPLSRAA+K +SD  E     DL SGSGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISELLDAGKSYFLLPLSRAAEKERSDAAE-----DLRSGSGLEVLPTGGDGIWRVKLVID 120

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAEEGNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KF PIDVG NN
Sbjct: 121 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVG-NN 180

Query: 181 NKAQIKDFDSGNGCLYAT 196
           NKAQIKDF SGNGCLYAT
Sbjct: 181 NKAQIKDFHSGNGCLYAT 192

[Close]

BLAST of Lsi07G007320 vs. NCBI nr
Match: XP_022931435.1 (uncharacterized protein LOC111437614 [Cucurbita moschata])

HSP 1 Score: 334.7 bits (857), Expect = 5.2e-88
Identity = 168/198 (84.85%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MGNCSLKGMAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGVYGVFRRPNLSSPLP 60
           MGNCSLKG+A DCEKPIRILTDSGNII+FHGPKQV QIL NYPPGVYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 61  ISEPLDAGKSYFLLPLSRAADKVQSDDGEQPPSKDLGSGSGLEVLPAGGNGVWRVKLVID 120
           ISE LDAGKSYFLLPLSRA +K +SD  E     DL SGSGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISELLDAGKSYFLLPLSRAVEKERSDAAE-----DLRSGSGLEVLPTGGDGIWRVKLVID 120

Query: 121 TKQLGEILAEEGNTEALIERIRAA---AAVQSPRRGKIGGWKPTWGNWFKFFPIDVGNNN 180
           TKQLGEILAEEGNTEALIER+RAA   AAVQSPRR KIGGWKPTWGNW KF PIDVG NN
Sbjct: 121 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVG-NN 180

Query: 181 NKAQIKDFDSGNGCLYAT 196
           NKAQIKDF SGNGCLYAT
Sbjct: 181 NKAQIKDFHSGNGCLYAT 192

[Close]

BLAST of Lsi07G007320 vs. TAIR 10
Match: AT3G61920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 5.2e-17
Identity = 58/156 (37.18%), Postives = 78/156 (50.00%), Query Frame = 0


Query: 1   MGNCSLKG------MAVDCEKPIRILTDSGNIISFHGPKQVHQILNNYPPGV-YGVFRRP 60
           MGNC  KG      +    +  I+++T +G ++  H P     I N +P  V +      
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 61  NLSSPLPISEPLDAGKSYFLLPL-SRAADKVQSDDGEQ---PPSKDLGSGSGLEVLPAGG 120
           + S PL   E L  G  Y+LLPL S AA   Q D  +Q   P     G    +  L  GG
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLSSSAAATAQLDSSDQLSTPYRMSFGKTPIMAALSGGG 120

Query: 121 NGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAA 146
            GVW+V+LVI  +QL EILAE+  TEAL+E +R  A
Sbjct: 121 CGVWKVRLVISPEQLAEILAEDVETEALVESVRTVA 156

[Close]

BLAST of Lsi07G007320 vs. TAIR 10
Match: AT4G10910.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 99  GSGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERIRAAAA 147
           G  ++V P   NGVW+ K+VI +KQL EILA EGNT ALI+++R AAA
Sbjct: 63  GPRIQVSPQRRNGVWKAKVVIGSKQLEEILAVEGNTHALIDQLRFAAA 110

[Close]

BLAST of Lsi07G007320 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 6.5e-04
Identity = 17/34 (50.00%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 112 VWRVKLVIDTKQLGEILAEEGNTEALIERIRAAA 146
           +W+V L+I+T++L +IL+E+G T  LIE +RA A
Sbjct: 149 IWKVNLIINTEELLQILSEDGRTNELIESVRAVA 182

The following BLAST results are available for this feature:

BLAST of Lsi07G007320 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi07G007320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J4V0	5.1e-89	84.34	uncharacterized protein LOC111483432 OS=Cucurbita maxima OX=3661 GN=LOC111483432...	[more]
A0A6J1EZE8	2.5e-88	84.85	uncharacterized protein LOC111437614 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A0A0KYF7	8.2e-87	85.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052720 PE=4 SV=1	[more]
A0A5A7TTS6	1.9e-83	83.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BTS2	1.9e-83	83.68	uncharacterized protein LOC103493080 OS=Cucumis melo OX=3656 GN=LOC103493080 PE=...	[more]

BLAST of Lsi07G007320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907067.1	1.2e-95	91.24	uncharacterized protein LOC120092893 [Benincasa hispida]	[more]
XP_023522023.1	1.1e-88	84.85	uncharacterized protein LOC111785895 [Cucurbita pepo subsp. pepo] >XP_023552871....	[more]
XP_022985422.1	1.1e-88	84.34	uncharacterized protein LOC111483432 [Cucurbita maxima]	[more]
KAG6577133.1	1.8e-88	85.35	hypothetical protein SDJN03_24707, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022931435.1	5.2e-88	84.85	uncharacterized protein LOC111437614 [Cucurbita moschata]	[more]

BLAST of Lsi07G007320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61920.1	5.2e-17	37.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G10910.1	2.6e-08	58.33	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G64700.1	6.5e-04	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..160 e-value: 1.4E-12 score: 48.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..101
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..166
None	No IPR available	PANTHER	PTHR33148:SF33	DUF4228 DOMAIN PROTEIN	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G007320.1	Lsi07G007320.1	mRNA