Lsi07G007030 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G007030
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr07: 7557085 .. 7557788 (-)
RNA-Seq Expression	Lsi07G007030
Synteny	Lsi07G007030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTGGAAGAGAAAATTAAATTAATTCTCAAAAAGAGAAAGAGAGAGAGAGAGAAAACAATGAATTAGTTTCCAGTACTTTATTATTATTACTAAATCTCGGAATATAATTTTCAATAAAGACAAAATCTACTATGGTCTAGTAATTCACCTGAAAATTTCACTTTACTCTTCCTCCGTCTTCCTCATTGCGGTTCAACCAAAAATGATATTTCTGGATCCGGAACCTTGACACGGAGAAACAAGAATCAATTACAGAAGAAAATAAGCACAAAACTCCAATCAACTGTAACAAAATTACCAAAACCAAAAAAGAGTGTTGCGAAACCTCGTTTTCCATTGATTCATACAGAAATTATCGCACAATTAGATTCGCTAAAAAATGGGAGCAGTAATCGCTTCAACACAATAAACAAACGTATGTCCATCCGCAATCCAAATTTAAGCTCAACAGAAGATCCAATCAAACCAAACAAACATCGAAAAGCCAAAAAAACAAAAATAAAAAAAATAATCCGAAAATCCATTCCGAGCTCAAGCAATCATGAACCTCGATCCATCCATACACAACGATCCGATCAATCCGAAGATTCCAGAAACAAGAAGGGAAAAAACGGATGTAAAGAGAAGAAACACCAAAAAATTGAATCCCAAATTCCAACATCAAGTTATGGGGGAAATTTCAAAGAAATCATAAGATAA

mRNA sequence

ATGAAACAAAATCTACTATGGTCTAGTAATTCACCTGAAAATTTCACTTTACTCTTCCTCCGTCTTCCTCATTGCGGTTCAACCAAAAATGATATTTCTGGATCCGGAACCTTGACACGGAGAAACAAGAATCAATTACAGAAGAAAATAAGCACAAAACTCCAATCAACTGTAACAAAATTACCAAAACCAAAAAAGAGTGTTGCGAAACCTCGTTTTCCATTGATTCATACAGAAATTATCGCACAATTAGATTCGCTAAAAAATGGGAGCAGTAATCGCTTCAACACAATAAACAAACGTATGTCCATCCGCAATCCAAATTTAAGCTCAACAGAAGATCCAATCAAACCAAACAAACATCGAAAAGCCAAAAAAACAAAAATAAAAAAAATAATCCGAAAATCCATTCCGAGCTCAAGCAATCATGAACCTCGATCCATCCATACACAACGATCCGATCAATCCGAAGATTCCAGAAACAAGAAGGGAAAAAACGGATGTAAAGAGAAGAAACACCAAAAAATTGAATCCCAAATTCCAACATCAAGTTATGGGGGAAATTTCAAAGAAATCATAAGATAA

Coding sequence (CDS)

ATGAAACAAAATCTACTATGGTCTAGTAATTCACCTGAAAATTTCACTTTACTCTTCCTCCGTCTTCCTCATTGCGGTTCAACCAAAAATGATATTTCTGGATCCGGAACCTTGACACGGAGAAACAAGAATCAATTACAGAAGAAAATAAGCACAAAACTCCAATCAACTGTAACAAAATTACCAAAACCAAAAAAGAGTGTTGCGAAACCTCGTTTTCCATTGATTCATACAGAAATTATCGCACAATTAGATTCGCTAAAAAATGGGAGCAGTAATCGCTTCAACACAATAAACAAACGTATGTCCATCCGCAATCCAAATTTAAGCTCAACAGAAGATCCAATCAAACCAAACAAACATCGAAAAGCCAAAAAAACAAAAATAAAAAAAATAATCCGAAAATCCATTCCGAGCTCAAGCAATCATGAACCTCGATCCATCCATACACAACGATCCGATCAATCCGAAGATTCCAGAAACAAGAAGGGAAAAAACGGATGTAAAGAGAAGAAACACCAAAAAATTGAATCCCAAATTCCAACATCAAGTTATGGGGGAAATTTCAAAGAAATCATAAGATAA

Protein sequence

MKQNLLWSSNSPENFTLLFLRLPHCGSTKNDISGSGTLTRRNKNQLQKKISTKLQSTVTKLPKPKKSVAKPRFPLIHTEIIAQLDSLKNGSSNRFNTINKRMSIRNPNLSSTEDPIKPNKHRKAKKTKIKKIIRKSIPSSSNHEPRSIHTQRSDQSEDSRNKKGKNGCKEKKHQKIESQIPTSSYGGNFKEIIR

Homology

The following BLAST results are available for this feature:

BLAST of Lsi07G007030 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi07G007030 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi07G007030 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi07G007030 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G007030.1	Lsi07G007030.1	mRNA