Lsi07G006660 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGCAATCATAATCACAGAACTAATAACGGCTATATCAGTGCCAGTTCCGGAAAATACGGCGGCGGCGGTGCTGATTGGACAAATGGAAGTTGAATTTGCGAAGTGCGAGTGTTGTGGGCTGACAGAGGAGTGTACACGGGCCTACATCGAGGGAATCCGCCGCCGATTTGACGGAAAATGGATTTGCGGTCTGTGTTCGGAGGCGGTTCAAGATGAGATTCTCAAGTCCGACGTACTCATTACCACCGAAGAAGCCATAGCAAAGCACATGAGCTTCTGCAAGAAATTCACCGCCGCCGTTGGACCACCGCCGGACCCGACGCCTCATCTCATCACGGCTATGAGACAGATCCTTCGCCGCAGTTTAGATTCCCCAAGAGCGTTAAGGTCCAGGCCGACCACTCCAACCACCGCTGCCGCTGACCAAATCCGCCGCCGGGCTCTTGCTTGA ATGTCAGCAATCATAATCACAGAACTAATAACGGCTATATCAGTGCCAGTTCCGGAAAATACGGCGGCGGCGGTGCTGATTGGACAAATGGAAGTTGAATTTGCGAAGTGCGAGTGTTGTGGGCTGACAGAGGAGTGTACACGGGCCTACATCGAGGGAATCCGCCGCCGATTTGACGGAAAATGGATTTGCGGTCTGTGTTCGGAGGCGGTTCAAGATGAGATTCTCAAGTCCGACGTACTCATTACCACCGAAGAAGCCATAGCAAAGCACATGAGCTTCTGCAAGAAATTCACCGCCGCCGTTGGACCACCGCCGGACCCGACGCCTCATCTCATCACGGCTATGAGACAGATCCTTCGCCGCAGTTTAGATTCCCCAAGAGCGTTAAGGTCCAGGCCGACCACTCCAACCACCGCTGCCGCTGACCAAATCCGCCGCCGGGCTCTTGCTTGA ATGTCAGCAATCATAATCACAGAACTAATAACGGCTATATCAGTGCCAGTTCCGGAAAATACGGCGGCGGCGGTGCTGATTGGACAAATGGAAGTTGAATTTGCGAAGTGCGAGTGTTGTGGGCTGACAGAGGAGTGTACACGGGCCTACATCGAGGGAATCCGCCGCCGATTTGACGGAAAATGGATTTGCGGTCTGTGTTCGGAGGCGGTTCAAGATGAGATTCTCAAGTCCGACGTACTCATTACCACCGAAGAAGCCATAGCAAAGCACATGAGCTTCTGCAAGAAATTCACCGCCGCCGTTGGACCACCGCCGGACCCGACGCCTCATCTCATCACGGCTATGAGACAGATCCTTCGCCGCAGTTTAGATTCCCCAAGAGCGTTAAGGTCCAGGCCGACCACTCCAACCACCGCTGCCGCTGACCAAATCCGCCGCCGGGCTCTTGCTTGA MSAIIITELITAISVPVPENTAAAVLIGQMEVEFAKCECCGLTEECTRAYIEGIRRRFDGKWICGLCSEAVQDEILKSDVLITTEEAIAKHMSFCKKFTAAVGPPPDPTPHLITAMRQILRRSLDSPRALRSRPTTPTTAAADQIRRRALA Homology
BLAST of Lsi07G006660 vs. ExPASy TrEMBL
Match: A0A5A7UJ52 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00380 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67 Identity = 135/151 (89.40%), Postives = 140/151 (92.72%), Query Frame = 0
BLAST of Lsi07G006660 vs. ExPASy TrEMBL
Match: A0A0A0L915 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644790 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.4e-62 Identity = 124/142 (87.32%), Postives = 131/142 (92.25%), Query Frame = 0
BLAST of Lsi07G006660 vs. ExPASy TrEMBL
Match: A0A6P6BJJ7 (uncharacterized protein LOC111318623 OS=Durio zibethinus OX=66656 GN=LOC111318623 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 3.0e-44 Identity = 94/139 (67.63%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of Lsi07G006660 vs. ExPASy TrEMBL
Match: A0A061GBP7 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029159 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 5.1e-44 Identity = 94/139 (67.63%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of Lsi07G006660 vs. ExPASy TrEMBL
Match: A0A6J1B5C7 (uncharacterized protein LOC110424195 OS=Herrania umbratica OX=108875 GN=LOC110424195 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43 Identity = 93/139 (66.91%), Postives = 114/139 (82.01%), Query Frame = 0
BLAST of Lsi07G006660 vs. NCBI nr
Match: KAA0053489.1 (hypothetical protein E6C27_scaffold190G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 265.4 bits (677), Expect = 3.0e-67 Identity = 135/151 (89.40%), Postives = 140/151 (92.72%), Query Frame = 0
BLAST of Lsi07G006660 vs. NCBI nr
Match: XP_038901315.1 (uncharacterized protein LOC120088232 [Benincasa hispida]) HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65 Identity = 129/142 (90.85%), Postives = 132/142 (92.96%), Query Frame = 0
BLAST of Lsi07G006660 vs. NCBI nr
Match: KGN58440.1 (hypothetical protein Csa_001716 [Cucumis sativus]) HSP 1 Score: 248.1 bits (632), Expect = 5.0e-62 Identity = 124/142 (87.32%), Postives = 131/142 (92.25%), Query Frame = 0
BLAST of Lsi07G006660 vs. NCBI nr
Match: KAG7036389.1 (Exocyst complex component EXO70A1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 235.7 bits (600), Expect = 2.6e-58 Identity = 124/152 (81.58%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of Lsi07G006660 vs. NCBI nr
Match: KAG6606667.1 (hypothetical protein SDJN03_00009, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 211.8 bits (538), Expect = 4.0e-51 Identity = 108/128 (84.38%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of Lsi07G006660 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36 Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Lsi07G006660 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) ) HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36 Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Lsi07G006660 vs. TAIR 10
Match: AT2G09970.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 126.3 bits (316), Expect = 2.0e-29 Identity = 67/141 (47.52%), Postives = 96/141 (68.09%), Query Frame = 0
BLAST of Lsi07G006660 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 100.9 bits (250), Expect = 9.2e-22 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of Lsi07G006660 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21 Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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