Lsi07G006600 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G006600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	oligouridylate-binding protein 1B-like
Location	chr07: 7051717 .. 7066807 (-)
RNA-Seq Expression	Lsi07G006600
Synteny	Lsi07G006600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTAAGAGCCACTCAAAAATTTCGTCGACGCCTCTCTCTTCTCCCATTTTTTCGAGGTCGTTGACACGAGCCTCGCTGCAGACCAGTGCCCTAATCTATCGCTTTGTCGGAAAATTACTGCAATTTAACACCATAAATCCGAGCGACAAAAAAAAAAAAAAATGCAGCATCAGAGGCTGAAGCAGCAGCAAGCTTTGATGCAGCAAGCTCTTCTTCAGCAGCAGTCTCTCTATCATCCTGGCCTCTTAGCTCCTCCTCAGGTTCCAGCTTCTTCCAATCTATCCTTTCTTCTTTCTTTACCACTGATTTATATTCTTTCATTTGATTCTTCCTTGATTTTGAGCTCGATTGCTTCTTGTTCGAACATCGGGGGGAGGAGGGTTAGTTTTTGTTTTTGTTTTTGTTTTTTTGTTTTTTGTTTTTTTCCCCCTTACAACGAGCTTGATTCGAGCCTTAGTGGGGAGCTTTACATTCTCATTTTTGTTGGAATTATTGACAAATTTAAGGGGATCCTGCATTTGTAAGATATGTCGCATTAAGTTTCATTTCCACTTGACATTGACATGTGCGGTATCATATCAATCAGTGGCGGAGCTAAGAATTTCCATAGAAGAGGGCAAAACTATTATAGTCTTATATTCTTCTTTCGTTTTTGTTTCCCTAAGGTTTGGCAAATTGTTAATTTCTTATCGATATCTGGATGTTTGATAATAGTTTAAATTCTAATAAAATCAATTCTCCTGGTTAGTTCTAAGTTCGAGATAACATCTGAATTATGATACGGTTCATTTCCGATTATGTTATTAGCAGTTGTCATCCTACGAGTATCTTTGACACCCAAATGTCATAGAGTTAGGTGAATTGTTCCTTGTGATTAGTGGAAGTGCACGCAAGGTAGCTTGAACACTCAAGTATATTATAAAAAAGAAATGTTATTAGCAGTTGTCATAGGAACGACGATTAGACTGCTTCCCTGTGCAGTGTTCCAAACAATATGTATGAGATTTTTATTTTATATTCCGATCTTTCTATCATGGATGTGAGTCCTCAGTGTAATCACCTTTTGGTCTGGAAAGTGCCATGAAAGGAATTTTGGAAACTTGAGAACAACAATAGGATAGAATCCTGGGTTTAATTAGCCATACAACAATTCAAGTTGGTTGTTTTTAATTGTATTTTGTTAGATGGTTAAACAATCACAGCTTTCTTCTCTACAAATAGGAAGCTTGTATTGTCAGTAGTTAACTCAACAAATATATTCTTTGAAAAGTTATAGAGGTATCAAACAAAGAAGGATGAAATAAATTCAATTTATTCTAATTTTGTTAAATATTATGTTATGAACACCTACATCCTGTTCACTGAATAAGATAAATATATCTGTCTCTTCTGCATATTATTTTAGTGATTCGTTTATCTAAGCTTATAATTTTCAATTATTTGAATGAATGGTTTGAAAATTGGAAGTGCATTTACTTGGACTAGTTTGGATTGTTTATTATAATCTCTCATAGGCTAGTAAGAGTTCTTCTCAATAAAATAATCTTCAGAATAAAAGACTATTTAAAGAGAAAAAGTAACAATCTACTTAACAACAAAATAAGAACTAATAACAAAACATAAATAATACAGAGATTAGTTATTATTGTTCACCCTTCCAAAATTTGTGAAAAATAGATATTTACAGTTAAAACTTAAAAATGCAATTCAGTTTGCTTTACATCAGGTTATTTTTCTTGCGTACAAGCATCAGCGTCTGTTAACCTCTCAGGATTAGTCAAGAAAACCTCATGGAACCATTTTGAAATCCTTCAGCTCCAGGTCGTTTTCTGCCGTGACATTTTTCTCATTTTTCTTTTACCCTTTCTTTTTGCAGATTGAGCCAATTCCTAGTGGAAATCTACCTCCTGGTTTTGATGCAAGCACTTGCCGCAGTGTGTGAGTATTTGGATATTACCATAATTTTTTTTTTCTTTTTTAAATTTTTATTATATTTTTCATTCTATTTTAATGTAATTTAATTTATTTCTTTTGCTTTTAGTTAGATTTCTTGCTGAGTCTTATAAAGCTGCGTTACCAGTCTCTTTGTTTCTATGCCATTGAAAATACTTCTTAGATTGCTTTGACAATATTAGTTTCACTAGTTTCCCTTTTGCAATTAAATCCTATTCTTGTTATTCCGTGAATCATTTCAATGATGATAATAATTAATAGGTATAGTTTGTGCACTTTAACTAAATTTATGAGGTATATTGTTGAATTTTTGATTATCTTCTCTTGTTGCATCTCTGAACCTTCTTTCTCACGTCCATTTGATTTATTGGATAATTGCTTTTGGATAATTCAGATATGTTGGAAACATCCATATACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCCCGTTGAAGGTTGTAAGCTTGTAAGAAAGGAGAAGGTTTGTCTTTTGCAGTGCATATTATCCTTCTTCAAACTCGAGTATTGGACTTGTTGGAAACTGCTTATCATGTTCTATGTTTTAAGCTCATTTGTCAGTTCAGTTATTATCATACTGACCTACACCTGTGTTGCCTCTGCTTTTTGTAGTCATCCTATGGATTTGTCCACTACTTTGATCGCAGATCAGCTGCACTGGCTATTTTGTCACTCAATGGGAGGCATTTGTGAGTAGAACGAGAAGATATGTATATATTTTTGTTAAGTCTTCTTATTCTTATTTTGTAGTATTAATGGGTTGTTATGTATGTTGCAGGTTTGGGCAGCCGATCAAAGTTAACTGGGCATATGCTAGTAGCCAGAGGGAAGACACATCAGGTTGGACTTTAAATTATTATTTATCCCATTTACCGATTTTATGATGGTTTTTTTTTATCAAAACAAAAATTCAACAATCATTTAAAGATTTTGTTTCTTTGTGCAGGTCATTTCAACATTTTTGTTGGCGATCTTAGCCCTGAAGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGGTTACTCCAGTTGCTCGTAAGCATCATCTCTTTGAATATTAAAAATCGTTTCTCATCTTCCTTTTTGAGCTATTCATTTAATGGATCCCTACTTCCTTCTTGAACTATTCATTTAATGGCTCACTTAGTATGAGAAAAACATGTGGCTCACTAACTATTAGGCTTTTTTAATAAAAAATTATATACATGCATGCACGCACATATATATATATGGTAACTTAAATTTTCACTGGAATTAAGGAAACTGGAAAGATTACAAACAAGGTAAGCTTCCTCTTGGAGTATGTAGAAAAACAGTTTCCCCAATAAAAACCAATAATAGAACACCTAAACTCAACAAAATTGAAAAAACTCAATCCTGACTTGGGTAGCTGACAAACAAGAAACCATAACTTTCTTTCCTCTTAGGATCTCAATGGCCTTTTGAACATGATGGATTCTGGCCAACCCTTTCAATGAAGCGTTAAATTAGATGAACCAAAGACTTCTTCCAATCCTTGAAAATCTAGAATGCCAACAATTCCAAAATTTCTTATTGGAAAATCTACTGCAAGTACAAATATAAAGTTGACTCATAGTTACCCCAAAGCTGGAAGGAAAGTCTAAAGAAACAAAAGGATGGCAGTTTCCTTTCCACCAAATCTTGAAATAACCTGTTTGATCAACCCCAAAAATGAAACTTTTATCTCTACCAAACTAATGCCTCTCATTCTTCCTGACAAACGTATTTTCTTATACCAGTGAAAATGTCATCCTTTCCAATTCATCAATAGACTAAAATGATTATTTCAATCAATCTCATGGAGAAGTGCATCTTTACCACACTGTTTTGCTAATTTCAGAGATGCAAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGATTTGTTTCCTTCCGAAACCAGCAGGTTTTGAATTTCTTCTCAGTGTCCCCTGCTAAATGTTCGTTCTTTAATTTTGTTCTGAAGAGTGAACATTTTGATGCACCTCTTTCAGGAAGCTCAAAATGCCATAAATGACTTAACTGGTATGTTCTCGTTCTTATCTTTTTCCTTAATGGTTGTCAGCCAACCCTCGTATTGTCTCTTGGGATTTAGTAAATGTGATGGATTCATGCTTGCAACTTATTAATCTAACCACTTATTGGTCTTGTATATTTTTTCCACTCAGGTAAGTGGCTTGGGAGTAGACAGATCCGTTGTAACTGGGCAGCCAAAGGTGCTGGAGTAAACGAAGATAAACAGAGCTCAGATTCCAAAAGTGTGGTAGAACTATCAAATGGCTCATCTGGTGAGTTTTGTACAGAACCTAGACCAAATATCATGCATATGGCTTTTTTTTATTTCACCAGTTACTACAGAGATTCCTACTTATGCTATTTTTTTTTGAAACGGAAACAAGATTTTCATTGATTTAATGAAATGAAACTAATACTAAAAGTACAGAAGAGGAAACAAAGCATAAAACTCAAACTTGCCCATAAGAACAAGAAATTTAAGACAAAACCCTCTAAAATCTGGATATTAATGGAATTAAAAACAACACTTGAAGCACAATGAAGATGGAAAAAAAAGTAGAAAAGCTGCCTCCAACAATCTAATGAGAATCATCATTCAAAGAAAAAATGTGGAGACTGAAGGAAACCATGTTTTGAACAGCAAGAAATTCTTCTTCCAATGTCGAGAATGAAGGAAACCAAAAATCTATCAACTTGAAAACGATCTTGAGCCCAGCGCAAAATGTAAAAATCTCCTCCCAAGCAACCAGGAACGGAAAAAGTAAAGTATGGAGGGAAAAACAAATCTAGTTGGAAACTTCTTTCTGAAATAGTGCCAAGACTGAGTTGTGGAATTTGAAGGGCAACTTAGAGCATTTCCGATGAAAATATCCCCAATCCTTCTGATAAACATGAAGAAGAGAATAAAAGGGCCTTCACTTCACCAAATGAGGCGGCTGAGAAGAAACTTGACCCAATTGAATTCTACACACTTCCACAATTGACTTTAAGCCGGAAGGGATTTGTGAAGGAGACAAAGGGATGAAACTTACTTGATTTGGCTGAGCAATAGACCTGTCTTCAGAATTTTGGAATAAACTCTAATACTTCCCCATATTGATCTTCTGAAAACTGAGATTCTGGAACTGGAGTTAGAGAATGAAAATCTTCTTCCTCACGACTCACACTCGCTGTTGAATCATCATCTAAGTCTATTGGAGACGAGGGGCTTTTCGGAGGAGAATAACAAAGAGTGCTCCTTTGAATTGCACAGAAGAGCCCGGTAGAGTGACTGTTGAGTGTTTGAAGCTGTGAGAAGGATGGACGACTTTAGAAGAGCCCAAGTGTTTTGAGGATAAACCTGAGACCTGAGCATTTACACAACTAATTTCCCCTGCATCATTGTTGATCCTTTGAAGCTTCGAGAAAACAGGAGAAGCTTTTTGTCTTGCATAATGAAATGGGAGGTCTGGGATTAAATTTCCAGAATCTATTCTTTCATTCAAAGCAAGGCCGAAATCTAACTTTTCACCTTCCAAATCAAAATTTAAGACTGACTTTTCCTCTTCCAAATAGTGTGAAAAACTGCCTTTCTTATTGAGTAAAGGAGGAGAGAAAGAGTTATTGACTGTTGTCTGTTGGACTTCCAAAATTTTGTCTTTGCCTTTATCAATAACCGATAAGGAAGGAGAGAGACTGTTGGGTTCCATGTGAACTGAAGAAAGAGGATGAACCTGGTTGCCAATTAAGTCATTCCCATCTTTGGAGATATTCCCACCAACGAATTTATTACCTTTTTCATTTATTGAAGCACTGGCTGGATTACCCATTTCATTTAATAAAGCACCGGTTGGATTATCAATCTTAAAATCATGAGAGAGAAAATCGGATGACTCTTCGAGTACTGCATGTCCAAAACCCTCTTCATCTTTTAACACTTGTAAAACTCGAACTTGATCAATGGAATTTGAAGAGACACAATCCAGCAAACTCTCCTCTCTCAAAGGCTTCATGTTCTGAGGAATCCAAGAGTTAATTGCTTCAAACCGAATTGAAAAATCTCTAAGAATTAAAGTCCTTGATTTTCAAAAAAGCTGGGATGAAGCCACAAGAATTTCTTTTCACTTTGATAATAGCTGAAGAACAATCCAAACAATTAAGTGTTTGAGAAGAGATACTTAATAAACCACCTAATTGCTGTCCAATTGCATAGAAAACAGAGCTCTTCCAATAAGCTAATGGTAGGTTTTTTATATGAATCGAACCTCCATAGCACCTTAAAAATTCTGGTTTAGAATGAGCTCGATTAGACCGTTGATCCAATCTCAAATGTATTTTTCCAAAGAGCTTCCTTTTTCCAAAAATCAAATTGGAAGATGAAACCTTTTCCAATTTCAAATGCATTTTTCCAAAGAGCTTCCACTTTTGCTATTATTTTAACGCCCTAAAAATTATATTGTGATTTTTTTATTTGACTTACAAGCAGAAGAAAACTGTTTCTGTGCAAGTGTGAAATTTTGGTTCTCTGTGACCTTGTTATTAGAGTAAGATCTGAAAAGCTTATTCATCGCTGTGATTGTGCAGAAGATGGTAAAGAGTCCGTAAATAATGAGGCTCCTGAGAACAACCTTCAATATACTACTGTATATGTGGGCAATCTCGCTCCAGAGGTAAAACTACTTTCATTATTGCATGATCTAACCGTTTAGCTCTTTAACATGCACTTAGAATGTGCACTAGCATGAAGGGCTCTTTAGAAGACTCCACATATACGGGAAAAGATGTTTGGGGGTGTTATCCTATTTCGTGTGGAGGATGTTTGATAAAATTCTCCTAAATATCGTAGTTCGCATAGCTATCTCATTTGGAATCAATAATTTTTCATGTCTGCAGGTCACTCAACTTGATCTACACCACCATTTTCATTCTCTTGGTGCTGGGGTCATTGAGGAAGTTCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTATAATACTCATGCCGAGGCAGCTCTGGCGATTCAGATGGGAAATACCCGGTCTTTTCTTTGTGGTAGACAAATAAAGGTATGGTTCTGCTTTATATGGTGAAGCTACTCTCTTATGGCTAATCATTATATTGTCCGTCAGGAAGACTAATAAAATATGGACCACATGTCACTTTTCCATTGCTACTAGTTGACAGTACTGAGTCTTGGTATTGGACAGTTGGCTCCGTTTTGGGTGCATAATCACTGCTTTTCTGTTTACACATAATTAAAAATACATAAAATGCAGAGTCGTCCACTGAGGGAGAAAAGTTAACAAGTTTAGTCATCAAAGGTCGAGCATACTTCACTTGCTCTCTTTTCATTTTCGATTACAACTTTCGAATTTTCAAGTTATTAATATATCTACAATCTTCTATGATCCCCTGGAAATTTCAGGCAGAAATTATGTGGTTCATAATTGTACTAATGGTGACCATCCTTCCTCCATTGGCTCACTTGACGGACCCCCCCTGCCCCCCATCCCTCTGGTCTTCTCTGCGACCTTCCTCTTCCCCTATTCCCCCAAGATTCCTTACAATGTTCTTCATTTCCTCTGAGGTCCTGGTTTTTTGCATTGAATGGAAATCTCTCATTATGCAGTGAAGTTGATAAAGCCCAATAAGGTGGCAACGCCAAGTTCTCTAAACTGAGTAAAGATAACACATACTGATTGCCCAATCATTGGATTGCACTCTCCCACTTGTATTAGTAACTGACATGATACAATATTAAATTGCTTTTGGATCAATTGGTGTGTTAATAGTAACTGTTCTCCCCCCGTCAACCAGAAGTTGTTTAGAGAGTTCCATTATGATTACTATGTTTTGTGGGTTGAAAAAACATCTAATCAAAAAGGCTCTCTCACTGAGATTATAAAGAACGATTCTTCTGCCTCACCCATCGGTTGATTGTCCAAGGTGGAGGGTCAAATCATGGTTTGGCCTCCTGCCCTGCCTAGAGCTCCTTCTCAGCTACCTTGCTCCCCTTCCCACTCCTTTTTCATCCCTAAACAGCCCTTTCCTTCCATATCTCTTTGTTAAAATGAATAACTTCATCCCATTACCCATTCTCTTAAGTGCAGGCAGTATAAATTAGGCAATTTATGGTTGAATCATGAGGATTTTCTTCCCCGCGTAGATCAAATGTGGAAATCTCTCCCAGATTCTTACTGTTCCGGGCACTTCTTTATGATGGGGCTGAAACATCACAAGGACCATCTTAGAAAATACAACTTAACCTTTGGCAATGTTCAAAAGAGAACTTGGTCTTCTCAGCAAAATCAGTGCCATAGCCTCTCAAGAACTCTTCCCCTAGTACATTTCTCAAAAAATTCAGAATATCCCTTAAAGCCCAGAACTCTTTCCTTGATTCTTTGACTTGGTCTTTTGCTCCATCTCACATTATTCTGTTAAGTTGCGTATGGAGGATTTGGTGGGAACTGCGAATCCTCTTTTGAAAGATCTTTATATGATGATTTAGAAGGATCACTATCTAATGAAAATTAAATTTTTTCTTTAGGAACTTAGTCTTGGAGCCATTAATACAGTTGATAGGCTAGTCTTGGATACTACTACTACTACCTTCTCTAAAAACTGTGAAACTAGGAGTTAAAAGAGGTTTATGGATGAGACAAATTTTCTGTTGATAAGCATGCGGATTATGAGTGGCTTAGACTATCGGTTGTATTTTTAATTATGTTTATTTCTGTTTAAGTCATCCTTACTGGGGAAGGACTCAACTCATAATGGCTGGTTGTTTAGTAAGGTTCACAGTGTTTACTGAGGTTGAAACATGCATTTGGTTGGTTCTTTGTCTTTCAATGTATTTCCAAATTTTGACTTTGATCAATCTCCATTGCTGATATGTGTTGAGGCCTCAAATTGACCTTTTGTAATAAAAAAAAAAAGTTGATAGGTTGCAATGGCGAATGCCTTATAAGCACTCGTCTCCTTGGTGCATTATGTATGAAGCTAGCATTGAGTTTTTTGGCCACCTTTTTATAAATTACCCATTTGCATCTTGTTTTTTGGCTCATTGTTTCGGAAGCTTTTGGTTAGTCTTTGCTGCTCCCTAACAATGTTTTTGATTTACTTGCCTATTTTTTGGTGGGTCATCTTTTCTTGATTCTCGAAAGGTGTTATGGTTAGCTCTCACTTGGGTGTTTTTCTAGCATCTATGATATGAATGGAATGGTCGTCTTTTCAAAGATACTTCCTCCTGTTTTTATCGTTTTGTAGACATGTGCTTTCTTTTAGTGTAAAAGTAAGCAGTCTTTTGTTCACAATAACTTATCTTATTCGATTTCAAATAGGAGAGCTTTGTTGTAATTCACCCATAGGTGTGTGGAGGTTTTACTCCCTTAATTAATCAATCAGTGAAATTGTTTCTTCTTAAAAAAAAAATCCTTAAAACTCAGTTGAAGAGACGACGTGTAGTGTGGAAATCTTCAGGAGGCAAAGGAGAATCTTAAGTCTCAAACTTTCCAGATACATATTTGATGGCTTTTTTTCCCCCTCTCTATATGTGTGTGTGTATGTAAAATATATATTGAATACGCGTGACCCCTTCTAGATACGGAAAGGGGACACGCTTGACCTTTGTCTTTGAAAAAAAAAAAGACAACTCATCTAATCTTCTCCAACCCTAAACTAAGCAACCTATTTAAAAAGCCTACTGCCCAACCCAAAACTTGGAAAAAAGAAACAAAAATTCAAACCCTAGAATCATCCAATTTTCATTTTTACGCTTGGGTCCTCACAAAGTCACGCAAAAAAGAAAAAAAAAATGAAGAAAAAAAAGGAATATCTTCAACAATTCAACGAAGAAGTTCGTTTATCTTTGTACCTTTCCCTCAAATCATCTTCTTCTCTGATCGATTTGACTTTAGCACGCCACCAACCTTGTCTATTGTTGTATTTCAATTGTCTTTGATGTTGCCTTTTGTATTGTATTTGTACTGTTGTTATTAACTTGAAATTTTATGGTTTTTAGTGGATTACATTTGGTAACTTTATGTTAAATTTACATATATCCTAGAACTATTTTTTTAATAAAAAAAATGTACCTCAGCGTATCGCATCCTAGTTTTTTAGAAATTGATGTATTGTTGTATCTTATTGCATCCGTATTTGTGTTTGCGCTTCATAGATTAGAGGTTTTTTCTTGAGCTCCGCTTCATTGAAGATGAAATTCTGGCAGCTAAGGCCCCTAGATGATATGGTTTTTCCATGATATTCTTTGTTACGTGTTGGAATACTCTCAAATCAGATATGATGAAGGCATTCTAGGACTTCTTTTTCCTTTATAGAATGGCATTAATTATTCTTAGTGTCAGCAAAGCAAAGCCTAAATAATGCCTTATTCCCAAAAGAGTTGGAAGCCTAGAGTGTGAAAGACTATACAAACCCATCATGTCACCACTAGTCTTACTAGTCTTACCTCTAGTCATCACCGAGTATCAGTTCACCTGATGATTGATGGCTGAGAATCCTAGAGTCCTGGCTTACAGCAGTGAATTAATTGAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTGGGTAAAAGAAACATTCATTGATAAAAGCAGGGGCTTTGTTTACTTTTGGTAAAAGAACCCCAGATAATACAAGAGTTACAGTAGGAATAGCCAATTATTGACTAAAAATGATAAATTGTAATGAGTGAAAGGGTGCTTCGTTTTATACCAAGAAAAAACAATAGATAAAACGAGTTAATTGAAGGTTTAGTACTAACTCCGACATGGAGAAGTCTTTCGAGGAAAAAGAGTGGTTTTTTCTGGATTTTATCAAATCTCTGAAAGGTTTTTGCCTTTTTGGTTATAGACGAAAATCTTGGTCTTGGGTTGCCTTTGAATGCCAACTATTCCATTCTATTATCATCTGTGGCCGTCGTCCAAGGGGAAAAATTCAGGCCACAACAGGTAGTAGACAAAGTTGGTCTCTGTTCCTCTTCATCTTTAGTTTCATGATGTTTTTTTTTCCTTGTTTTTGTTTTTTGGCCGGCTCATTCTCAAAGGTCAATCTCTCTGGTTTCCCAGATGGCTTTTCTGTGGGCAGCAACGCTCTCTCCATTAACCAACCACAACATGCTGATAGCACCATTATTCACTCCTAAGGACTTAATTAGGTTGAGCGTTGGTATGGAAACGTACTAAGTGAGAACTTTCAAATTCAGAGGAACCCTTGAAAATGGGCAGTATCCTTCCGTTAAAACGTGACTATTCTTCTCAAGGCCATAAAATACTTTGAAGCCTTCTCCGACTTAGACGTAAACCTTTCCAGATTGAAGGTCTTGGGTCTCGTTCCGCCAATGTCCTCCAAAATAGTGCCAACATCATCCAATGTTCTTCAGTGACTTAGCCCTCAGATTATCTTGGTCTCAACTTAAATGGCCCTCAAATACATTTTCTTTTGGAAACCAATCATTGATTTAGGTTGGTGGTAGGTACACCCTTATTTTCCCTTCTAAAATCTACTACATATTCCTCTCCAAGGTGCCGAGAAAAGTCATCTCCACTGTTGGGAAATTTCATCAGAGCTTCTAGGATGGGGACAATCCCATCACAATCCACCATATAGTCAACTGGGAAAATGCCTCTTTCCCTATCCTCCCACGTGGCATAGGTTTTAGAGATTTTTTCCAAAGTAGCCAAGATGGCATTTTTCTGTAGAAAAGGTAGCTCTTTGGAGAAAATATTTTTGGCCAAATATTACCTCAATAGTCAACCCTGCAGATTGGTGGCCTAATTTCATTTTAATAGTCGGGCTAAAGATTCTTGAGTTGGTGCTTCCCAAAGACCACTTGTAGTTCTGTTCTCCAACTGCTACGAGGGCTCCATCTCAGTGGTCAGCTAGAATTATTCGAACTAATGCGGTGTACGCTATTCTCTGAAATGTTTTGTTCTTATAATATCTACGATAGTTTCTCTAATTGGAGGAATTTTTTAAGCCTCCCTTTGCTGGTTTGGAGCTTTCCTTCTCTCTTTTGTCTATTTCACACATCATGAAACTCTGTTTCTTTTCAGGCTTACTAGTTACTACTGGTATCTCCTCGTTATCTACTCCCACTGTTTATTATAAAAGCGTGTATCACACTCAGTTTTTATAATATGGAAAACATTTTTGCAGTTTGTACTTGAGATTCAAAATAAAAAAGAAACTTGAGTGGTAAAGAGTCTAGGAACTCATGAGTTCATTTGAGGAATAACCCAATTGGTTTTTGATCCTTATTGCAGTGCTCTTGGGGTAGCAAACCCACACCACCAGGAACAACATCCAATCCACTCCCACTACCTGCAGTTGGTTCCACTCCTGGCCTTTCAGCAACTGACCTTTTGGCTTATGAGCGGCAACTAGCAATAAGCAAGATGGGTGGTGTCCATGCAGCACTTATGCACCCTCAGGGGCATCTTCCTTTGAAACAGGCACCAATGGGAATGGGTGCAGCTGCAGCTAGCCAGGCTTTATATGATGGTGGCTTCCAGAACATTGCAGCACAGCAACTTATGTACTACCAGTAGTAAATATGGCTTAGCTTTTGCTTTTGTTTGATGAAATCTATTTATATCCACCAACCTTTTTCTGAGATTATGAGCCTTCAGTGAGCCCTCTATATCTGAGTTTTTCCTTCTTTTTGGTGATCGGATTCTTTTGCACCTACAAATGGAAAGTATGTTTGTTACACCTGTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTCTTTTTAGTGTTATTAGGGCCAGGGGCAGTGGCTATGGGCATTAGAGGAAGCTTGTTGATCATTCACAAAGTAATTTGATACTTTGTTTTCTTTCTGAAAGACAATCTTGTTGTTACATACAATATAATATAGAACATATTCAACTGATTAACCCACCACAACCTTCTGCTCCCAATAAAAGAGTGAACAAAAAGAGCTAGAAGGGAAAGCAGAGTGTACTGCGAAGATTGGGCTCTTAATTCATTGGCGTTTCTGATTTTTGTGCTTATATATATTTGATTGTGTATATTATGTTTTTAATGTTTGACCTCGAAATGGATTAATGAACGATTTTTTGTTCAATAATATTCCTTTTAGGTAACAAATTTCTTGAAATAATCCTTCAATTTTTTTTTGACATCCGTGAGTGTCTGGGCAACTTATGCGCACCTCAACTAATTTCACGGGACAACTCGTTTAACCCTACAACATTTGAGTGTCAAAGAAACTCATAAGAAATTAATTCTTAG

mRNA sequence

TTCTTAAGAGCCACTCAAAAATTTCGTCGACGCCTCTCTCTTCTCCCATTTTTTCGAGGTCGTTGACACGAGCCTCGCTGCAGACCAGTGCCCTAATCTATCGCTTTGTCGGAAAATTACTGCAATTTAACACCATAAATCCGAGCGACAAAAAAAAAAAAAAATGCAGCATCAGAGGCTGAAGCAGCAGCAAGCTTTGATGCAGCAAGCTCTTCTTCAGCAGCAGTCTCTCTATCATCCTGGCCTCTTAGCTCCTCCTCAGATTGAGCCAATTCCTAGTGGAAATCTACCTCCTGGTTTTGATGCAAGCACTTGCCGCAGTGTATATGTTGGAAACATCCATATACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCCCGTTGAAGGTTGTAAGCTTGTAAGAAAGGAGAAGTCATCCTATGGATTTGTCCACTACTTTGATCGCAGATCAGCTGCACTGGCTATTTTGTCACTCAATGGGAGGCATTTGTTTGGGCAGCCGATCAAAGTTAACTGGGCATATGCTAGTAGCCAGAGGGAAGACACATCAGGTCATTTCAACATTTTTGTTGGCGATCTTAGCCCTGAAGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGGTTACTCCAGTTGCTCAGATGCAAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGATTTGTTTCCTTCCGAAACCAGCAGGAAGCTCAAAATGCCATAAATGACTTAACTGGTAAGTGGCTTGGGAGTAGACAGATCCGTTGTAACTGGGCAGCCAAAGGTGCTGGAGTAAACGAAGATAAACAGAGCTCAGATTCCAAAAGTGTGGTAGAACTATCAAATGGCTCATCTGAAGATGGTAAAGAGTCCGTAAATAATGAGGCTCCTGAGAACAACCTTCAATATACTACTGTATATGTGGGCAATCTCGCTCCAGAGGTCACTCAACTTGATCTACACCACCATTTTCATTCTCTTGGTGCTGGGGTCATTGAGGAAGTTCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTATAATACTCATGCCGAGGCAGCTCTGGCGATTCAGATGGGAAATACCCGTCATCCTTACTGGGGAAGGACTCAACTCATAATGGCTGACGAAAATCTTGGTCTTGGGTTGCCTTTGAATGCCAACTATTCCATTCTATTATCATCTGTGGCCGTCGTCCAAGGGGAAAAATTCAGGCCACAACAGTGCTCTTGGGGTAGCAAACCCACACCACCAGGAACAACATCCAATCCACTCCCACTACCTGCAGTTGGTTCCACTCCTGGCCTTTCAGCAACTGACCTTTTGGCTTATGAGCGGCAACTAGCAATAAGCAAGATGGGTGGTGTCCATGCAGCACTTATGCACCCTCAGGGGCATCTTCCTTTGAAACAGGCACCAATGGGAATGGGTGCAGCTGCAGCTAGCCAGGCTTTATATGATGGTGGCTTCCAGAACATTGCAGCACAGCAACTTATGTACTACCAGTAGTAAATATGGCTTAGCTTTTGCTTTTGTTTGATGAAATCTATTTATATCCACCAACCTTTTTCTGAGATTATGAGCCTTCATGTTATTAGGGCCAGGGGCAGTGGCTATGGGCATTAGAGGAAGCTTGTTGATCATTCACAAAGTAATTTGATACTTTGTTTTCTTTCTGAAAGACAATCTTGTTGTTACATACAATATAATATAGAACATATTCAACTGATTAACCCACCACAACCTTCTGCTCCCAATAAAAGAGTGAACAAAAAGAGCTAGAAGGGAAAGCAGAGTGTACTGCGAAGATTGGGCTCTTAATTCATTGGCGTTTCTGATTTTTGTGCTTATATATATTTGATTGTGTATATTATGTTTTTAATGTTTGACCTCGAAATGGATTAATGAACGATTTTTTGTTCAATAATATTCCTTTTAGGTAACAAATTTCTTGAAATAATCCTTCAATTTTTTTTTGACATCCGTGAGTGTCTGGGCAACTTATGCGCACCTCAACTAATTTCACGGGACAACTCGTTTAACCCTACAACATTTGAGTGTCAAAGAAACTCATAAGAAATTAATTCTTAG

Coding sequence (CDS)

ATGCAGCATCAGAGGCTGAAGCAGCAGCAAGCTTTGATGCAGCAAGCTCTTCTTCAGCAGCAGTCTCTCTATCATCCTGGCCTCTTAGCTCCTCCTCAGATTGAGCCAATTCCTAGTGGAAATCTACCTCCTGGTTTTGATGCAAGCACTTGCCGCAGTGTATATGTTGGAAACATCCATATACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCCCGTTGAAGGTTGTAAGCTTGTAAGAAAGGAGAAGTCATCCTATGGATTTGTCCACTACTTTGATCGCAGATCAGCTGCACTGGCTATTTTGTCACTCAATGGGAGGCATTTGTTTGGGCAGCCGATCAAAGTTAACTGGGCATATGCTAGTAGCCAGAGGGAAGACACATCAGGTCATTTCAACATTTTTGTTGGCGATCTTAGCCCTGAAGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGGTTACTCCAGTTGCTCAGATGCAAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGATTTGTTTCCTTCCGAAACCAGCAGGAAGCTCAAAATGCCATAAATGACTTAACTGGTAAGTGGCTTGGGAGTAGACAGATCCGTTGTAACTGGGCAGCCAAAGGTGCTGGAGTAAACGAAGATAAACAGAGCTCAGATTCCAAAAGTGTGGTAGAACTATCAAATGGCTCATCTGAAGATGGTAAAGAGTCCGTAAATAATGAGGCTCCTGAGAACAACCTTCAATATACTACTGTATATGTGGGCAATCTCGCTCCAGAGGTCACTCAACTTGATCTACACCACCATTTTCATTCTCTTGGTGCTGGGGTCATTGAGGAAGTTCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTATAATACTCATGCCGAGGCAGCTCTGGCGATTCAGATGGGAAATACCCGTCATCCTTACTGGGGAAGGACTCAACTCATAATGGCTGACGAAAATCTTGGTCTTGGGTTGCCTTTGAATGCCAACTATTCCATTCTATTATCATCTGTGGCCGTCGTCCAAGGGGAAAAATTCAGGCCACAACAGTGCTCTTGGGGTAGCAAACCCACACCACCAGGAACAACATCCAATCCACTCCCACTACCTGCAGTTGGTTCCACTCCTGGCCTTTCAGCAACTGACCTTTTGGCTTATGAGCGGCAACTAGCAATAAGCAAGATGGGTGGTGTCCATGCAGCACTTATGCACCCTCAGGGGCATCTTCCTTTGAAACAGGCACCAATGGGAATGGGTGCAGCTGCAGCTAGCCAGGCTTTATATGATGGTGGCTTCCAGAACATTGCAGCACAGCAACTTATGTACTACCAGTAG

Protein sequence

MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSEDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFRPQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQGHLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ

Homology

[Close]

BLAST of Lsi07G006600 vs. ExPASy Swiss-Prot
Match: Q9LQI9 (Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 8.3e-188
Identity = 337/454 (74.23%), Postives = 366/454 (80.62%), Query Frame = 0


Query: 4   QRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQV 63
           Q+ +QQQ +MQQAL+QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNIHIQV
Sbjct: 6   QQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQV 65

Query: 64  TEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNW 123
           TEPLLQEVF   GPVE CKL+RKEKSSYGFVHYFDRRSA LAILSLNGRHLFGQPIKVNW
Sbjct: 66  TEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNW 125

Query: 124 AYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGFGFV 183
           AYAS QREDTS HFNIFVGDLSPEVTDAMLF CFS Y +CSDARVMWDQKTGRSRGFGFV
Sbjct: 126 AYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFV 185

Query: 184 SFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSEDGK 243
           SFRNQQ+AQ AI+++TGKWLGSRQIRCNWA KGA   EDKQSSDSKSVVEL++G SEDGK
Sbjct: 186 SFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGK 245

Query: 244 ESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYN 303
           ++ N EAPENN QYTTVYVGNLAPEV+Q+DLH HFHSLGAGVIEEVR+QRDKGFGFVRY+
Sbjct: 246 DTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 305

Query: 304 THAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFRPQQ 363
           TH EAALAIQMGNT H Y    Q+                                   +
Sbjct: 306 THVEAALAIQMGNT-HSYLSGRQM-----------------------------------K 365

Query: 364 CSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQGHLP 423
           CSWGSKPTP GT SNPLP PA    PG SA+DLLAYERQLA+SKM G++  + HPQG   
Sbjct: 366 CSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHA 419

Query: 424 LKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
            KQA   MGA  ++QA+YDGG+QN  AQQLMYYQ
Sbjct: 426 FKQA--AMGATGSNQAIYDGGYQN--AQQLMYYQ 419

[Close]

BLAST of Lsi07G006600 vs. ExPASy Swiss-Prot
Match: Q9LJH8 (Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 1.8e-182
Identity = 333/458 (72.71%), Postives = 368/458 (80.35%), Query Frame = 0


Query: 2   QHQRLKQQQALM-QQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 61
           QHQ+ +QQQA+M QQAL+QQ SLYHPG+LAPPQ+EP+PSGNLPPGFD STCRSVYVGNIH
Sbjct: 8   QHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIH 67

Query: 62  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 121
            QVTEPLLQE+F S GPVE  KL+RK+KSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 68  TQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 127

Query: 122 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 181
           VNWAYA+ QREDTS HFNIFVGDLSPEVTDA L+  FS +SSCSDARVMWDQKTGRSRGF
Sbjct: 128 VNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGF 187

Query: 182 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 241
           GFVSFRNQQ+AQ AIN++ GKWL SRQIRCNWA KGA   +DK SSD KSVVEL+ GSSE
Sbjct: 188 GFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSE 247

Query: 242 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 301
           DGKE++N E PENN Q+TTVYVGNLAPEVTQLDLH +FH+LGAGVIEEVR+QRDKGFGFV
Sbjct: 248 DGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFV 307

Query: 302 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 361
           RYNTH EAALAIQMGNT+ PY    Q+                                 
Sbjct: 308 RYNTHPEAALAIQMGNTQ-PYLFNRQI--------------------------------- 367

Query: 362 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 421
             +CSWG+KPTPPGT SNPLP PA    PGLSA DLL YERQLA+SKM  V+ ALMH QG
Sbjct: 368 --KCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHQQG 427

Query: 422 HLPLKQAPMGMGAAAASQALYDGGFQNI-AAQQLMYYQ 458
             PL+QA  G+ AA A+ A+YDGGFQN+ AAQQLMYYQ
Sbjct: 428 QHPLRQA-HGINAAGATAAMYDGGFQNVAAAQQLMYYQ 427

[Close]

BLAST of Lsi07G006600 vs. ExPASy Swiss-Prot
Match: Q9M427 (Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE=2 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 2.1e-170
Identity = 318/457 (69.58%), Postives = 356/457 (77.90%), Query Frame = 0


Query: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60
           MQ QRLKQQQ   QQAL+ QQSLYHPGLLAPPQIEPI SGNLPPGFD+STCRSVYVGNIH
Sbjct: 2   MQQQRLKQQQ---QQALM-QQSLYHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIH 61

Query: 61  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120
            QVTEPLLQEVF S GP+EGCKL+RK+KSSYGFV YFDRRSAALAI++LNGRHLFGQPIK
Sbjct: 62  PQVTEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIK 121

Query: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 180
           VNWAYAS+QREDTS H+NIFVGDLSPEVTDA LFACFS Y+SCSDARVMWDQKTGRSRGF
Sbjct: 122 VNWAYASAQREDTSNHYNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGF 181

Query: 181 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 240
           GFVSFRNQQEAQ+AINDL GKWLGSRQIRCNWAAKGAG    +Q+SD+KSVVEL++G+S+
Sbjct: 182 GFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGA-VGEQNSDAKSVVELTSGTSD 241

Query: 241 DGKES-VNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGF 300
           DG+E  VN +APENN QYTTVYVGNLAPEVT +DLH HFH+LGAGVIE+VRIQRDKGFGF
Sbjct: 242 DGQEKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGF 301

Query: 301 VRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKF 360
           VRY++HAEAA AIQ+GN R                            LL           
Sbjct: 302 VRYSSHAEAARAIQLGNAR----------------------------LLFG--------- 361

Query: 361 RPQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQ 420
           +P +CSWGSKPTPPG++SNPLP PA+G  PGLSA DL AY+RQLA++KM G  A +    
Sbjct: 362 KPVKCSWGSKPTPPGSSSNPLPPPAIGQIPGLSAMDLAAYQRQLALAKMAGAQAFMQ--- 405

Query: 421 GHLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYY 457
                   P G    A  Q +YDGG+  IA+ Q   Y
Sbjct: 422 --------PQGQRIGAPGQGIYDGGYGGIASTQPPMY 405

[Close]

BLAST of Lsi07G006600 vs. ExPASy Swiss-Prot
Match: Q9SYG4 (Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 6.0e-170
Identity = 305/459 (66.45%), Postives = 355/459 (77.34%), Query Frame = 0


Query: 2   QHQRLKQQQALMQQALLQQQ-SLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 61
           Q Q+ + QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNIH
Sbjct: 12  QQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIH 71

Query: 62  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 121
            QVTE LLQE+F S GP+E CKL+RK+KSSYGFVHYFDRR A++AI++LNGRH+FGQP+K
Sbjct: 72  TQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMK 131

Query: 122 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 181
           VNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FS ++SCSDARVMWDQKTGRSRGF
Sbjct: 132 VNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGF 191

Query: 182 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 241
           GFVSFRNQQ+AQ AIN++ GKW+ SRQIRCNWA KGA   EDK SSD KSVVEL+NGSSE
Sbjct: 192 GFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSE 251

Query: 242 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 301
           DG+E  N +APENN Q+TTVYVGNL+PEVTQLDLH  F++LGAGVIEEVR+QRDKGFGFV
Sbjct: 252 DGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFV 311

Query: 302 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 361
           RYNTH EAALAIQMGN + P+    Q+                                 
Sbjct: 312 RYNTHDEAALAIQMGNAQ-PFLFSRQI--------------------------------- 371

Query: 362 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 421
             +CSWG+KPTP GT SNPLP PA  S P LSA DLLAYERQLA++K        MHPQ 
Sbjct: 372 --RCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQA 426

Query: 422 HLPLKQAPMGMGAAAASQALYDGGFQNIAA--QQLMYYQ 458
              L+QA +G+  A  + A+YDGG+QN+AA  QQLMYYQ
Sbjct: 432 QHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQLMYYQ 426

[Close]

BLAST of Lsi07G006600 vs. ExPASy Swiss-Prot
Match: Q6YZW2 (RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 1.2e-133
Identity = 273/477 (57.23%), Postives = 323/477 (67.71%), Query Frame = 0


Query: 2   QHQRLK---QQQALMQQALLQQQSLYHPGLLAP------PQIEPIPSGNLPPGFDASTCR 61
           Q QRL+   QQQAL+ Q  LQQQ  Y  G+LA        Q+EPI +GNLPPGFD STCR
Sbjct: 14  QQQRLRQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISNGNLPPGFDPSTCR 73

Query: 62  SVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGR 121
           SVYVGN+H  VTE LL EVF S G VE CKL+RKEKSS+GFV Y+DRRSAALAI++L+GR
Sbjct: 74  SVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 133

Query: 122 HLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQ 181
           H+ GQ IKVNWAYAS+QREDTSGHF+IFVGDLS EV DA L+ACFS Y SCSDARVMWD 
Sbjct: 134 HICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDN 193

Query: 182 KTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVV 241
           KTGRSRG+GFVSFRNQQEA+ AI ++TGKWLGSRQIRCNWA K     E+KQ +D+ + V
Sbjct: 194 KTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNA--EEKQETDNHNAV 253

Query: 242 ELSNGSS-----EDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIE 301
            L+NGSS     E  +++ + E PENN   TTVYVGNL  EV + +LH HF++LG G IE
Sbjct: 254 VLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIE 313

Query: 302 EVRIQRDKGFGFVRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSIL 361
           EVR+Q+DKGFGFVRY+ H EAALAIQM N                    GL         
Sbjct: 314 EVRVQQDKGFGFVRYSNHGEAALAIQMAN--------------------GL--------- 373

Query: 362 LSSVAVVQGEKFRPQQCSWGSKPTPPGTTSNPL--------PLPAVGSTPGLSATDLLAY 421
                VV+G   +P +CSWG+KPTPPGT+S PL        P+P  G   G SA D++AY
Sbjct: 374 -----VVRG---KPIKCSWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAY 433

Query: 422 ERQLAISKMGGVHAALMHPQGHLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYY 457
           +RQL +S++     A  H        Q   G+  AA SQALYDG     +AQQLMYY
Sbjct: 434 QRQLTLSQVAAGQIAGQHGLA----GQVSAGL-LAAGSQALYDGYPNQSSAQQLMYY 446

[Close]

BLAST of Lsi07G006600 vs. ExPASy TrEMBL
Match: A0A1S3CDG5 (oligouridylate-binding protein 1B-like OS=Cucumis melo OX=3656 GN=LOC103499180 PE=4 SV=1)

HSP 1 Score: 781.2 bits (2016), Expect = 2.4e-222
Identity = 403/458 (87.99%), Postives = 409/458 (89.30%), Query Frame = 0


Query: 1   MQHQRLK-QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLK QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQ SD+KSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNN+APENNLQYTTVYVGNLAPEV+QLDLH HFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKF 360
           VRYNTHAEAALAIQMGNTR    G                                    
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCG------------------------------------ 360

Query: 361 RPQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQ 420
           R  +CSWGSKPTPPGTTSNPLPLPAV STPGLSATDLLAYERQLAI+KMGGVHAALMHPQ
Sbjct: 361 RQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSATDLLAYERQLAITKMGGVHAALMHPQ 420

Query: 421 GHLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           G  P+KQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 421 GPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 422

[Close]

BLAST of Lsi07G006600 vs. ExPASy TrEMBL
Match: A0A0A0LCP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645950 PE=4 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 9.1e-222
Identity = 402/458 (87.77%), Postives = 408/458 (89.08%), Query Frame = 0


Query: 1   MQHQRLK-QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLK QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQ SD+KSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNN+APENNLQYTTVYVGNLAPEV+QLDLH HFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKF 360
           VRYNTHAEAALAIQMGNTR    G                                    
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCG------------------------------------ 360

Query: 361 RPQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQ 420
           R  +CSWGSKPTPPGTTSNPLPLPAV STPGLSA DLLAYERQLAI+KMGGVHAALMHPQ
Sbjct: 361 RQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQ 420

Query: 421 GHLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           G  P+KQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 421 GPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 422

[Close]

BLAST of Lsi07G006600 vs. ExPASy TrEMBL
Match: A0A6J1IZV8 (oligouridylate-binding protein 1B-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479942 PE=4 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 3.2e-219
Identity = 395/457 (86.43%), Postives = 408/457 (89.28%), Query Frame = 0


Query: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60
           MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH
Sbjct: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60

Query: 61  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120
           +QVTEPLLQEVFGSIG VEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 61  VQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120

Query: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 180
           VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSRGF
Sbjct: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGF 180

Query: 181 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 240
           GFVSFRNQQEAQ+AINDL+GKWLGS+QIRCNWAAKGAGVNEDKQSSD+KSVVELSNGSSE
Sbjct: 181 GFVSFRNQQEAQSAINDLSGKWLGSKQIRCNWAAKGAGVNEDKQSSDTKSVVELSNGSSE 240

Query: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 300
           DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLH HFHSLGAGVIEEVR QRDKGFGFV
Sbjct: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRTQRDKGFGFV 300

Query: 301 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 360
           RY+THAEAALAIQMGNTR    G                                    R
Sbjct: 301 RYSTHAEAALAIQMGNTRSFLCG------------------------------------R 360

Query: 361 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 420
             +CSWGSKPTPPGT SNPLPLPA+ STPGLSATDLLAYERQL++SKMGGVHAALMHPQG
Sbjct: 361 QIKCSWGSKPTPPGTASNPLPLPAMASTPGLSATDLLAYERQLSLSKMGGVHAALMHPQG 420

Query: 421 HLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           H PLKQAPMG+GAAAASQALYDGGFQNI++QQLMYYQ
Sbjct: 421 H-PLKQAPMGIGAAAASQALYDGGFQNISSQQLMYYQ 420

[Close]

BLAST of Lsi07G006600 vs. ExPASy TrEMBL
Match: A0A6J1GUK1 (oligouridylate-binding protein 1B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457671 PE=4 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 3.2e-219
Identity = 396/457 (86.65%), Postives = 407/457 (89.06%), Query Frame = 0


Query: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60
           MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH
Sbjct: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60

Query: 61  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120
           +QVTEPLLQEVFGSIG VEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 61  VQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120

Query: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 180
           VNWAYASSQREDTSGHFNIFVGDLS EVTDAMLFACFS YSSCSDARVMWDQKTGRSRGF
Sbjct: 121 VNWAYASSQREDTSGHFNIFVGDLSAEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGF 180

Query: 181 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 240
           GFVSFRNQQEAQ+AINDL+GKWLGS+QIRCNWAAKGAGVNEDKQSSD+KSVVELSNGSSE
Sbjct: 181 GFVSFRNQQEAQSAINDLSGKWLGSKQIRCNWAAKGAGVNEDKQSSDTKSVVELSNGSSE 240

Query: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 300
           DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLH HFHSLGAGVIEEVR QRDKGFGFV
Sbjct: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRTQRDKGFGFV 300

Query: 301 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 360
           RYNTHAEAALAIQMGNTR    G                                    R
Sbjct: 301 RYNTHAEAALAIQMGNTRSFLCG------------------------------------R 360

Query: 361 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 420
             +CSWGSKPTPPGT SNPLPLPA+ STPGLSATDLLAYERQLA+SKMGGVHAALMHPQG
Sbjct: 361 QIKCSWGSKPTPPGTASNPLPLPAMASTPGLSATDLLAYERQLALSKMGGVHAALMHPQG 420

Query: 421 HLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           H PLKQAPMG+GAAAASQALYDGGFQNI++QQLMYYQ
Sbjct: 421 H-PLKQAPMGIGAAAASQALYDGGFQNISSQQLMYYQ 420

[Close]

BLAST of Lsi07G006600 vs. ExPASy TrEMBL
Match: A0A6J1D4M7 (oligouridylate-binding protein 1B-like OS=Momordica charantia OX=3673 GN=LOC111016923 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 4.7e-218
Identity = 396/459 (86.27%), Postives = 405/459 (88.24%), Query Frame = 0


Query: 1   MQHQRLK--QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGN 60
           MQHQRLK  QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGN 60

Query: 61  IHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQP 120
           IH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQP
Sbjct: 61  IHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSR 180
           IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYSSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGS 240
           GFGFVSFRNQQEAQ+AINDLTGKWLGSRQIRCNWA KGAGVNEDKQ SD+KSVVEL+N S
Sbjct: 181 GFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGAGVNEDKQGSDTKSVVELTNCS 240

Query: 241 SEDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFG 300
           SEDGKESVNNEAPENN Q+TTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFG
Sbjct: 241 SEDGKESVNNEAPENNPQFTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFG 300

Query: 301 FVRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEK 360
           FVRYNTHAEAALAIQMGNTR    G                                   
Sbjct: 301 FVRYNTHAEAALAIQMGNTRSFLCG----------------------------------- 360

Query: 361 FRPQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHP 420
            R  +CSWG+KPTPPGT SNPLPLPA+ STPGLSATDLLAYERQLAI+KMGGVHAALMHP
Sbjct: 361 -RQIKCSWGNKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHP 420

Query: 421 QGHLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           QGH PLKQAPMG+GAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 421 QGHHPLKQAPMGIGAAAASQALYDGGFQNIAAQQLMYYQ 423

[Close]

BLAST of Lsi07G006600 vs. NCBI nr
Match: XP_038896645.1 (oligouridylate-binding protein 1B-like isoform X1 [Benincasa hispida])

HSP 1 Score: 792.7 bits (2046), Expect = 1.6e-225
Identity = 406/457 (88.84%), Postives = 410/457 (89.72%), Query Frame = 0


Query: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60
           MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH
Sbjct: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60

Query: 61  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120
           IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 61  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120

Query: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 180
           VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSRGF
Sbjct: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGF 180

Query: 181 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 240
           GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSD+KSVVELSNGSSE
Sbjct: 181 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDTKSVVELSNGSSE 240

Query: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 300
           DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLH HFHSLGAGVIEEVRIQRDKGFGFV
Sbjct: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRIQRDKGFGFV 300

Query: 301 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 360
           RYNTHAEAALAIQMGNTR    G                                    R
Sbjct: 301 RYNTHAEAALAIQMGNTRSFLCG------------------------------------R 360

Query: 361 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 420
             +CSWGSKPTPPGT SNPLPLPAV STPGLSATDLLAYERQLAISKMGGVHAALMHPQG
Sbjct: 361 QIKCSWGSKPTPPGTASNPLPLPAVASTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 420

Query: 421 HLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           H P+KQAPMGMGAAAASQALYDGGFQN+AAQQLMYYQ
Sbjct: 421 HHPMKQAPMGMGAAAASQALYDGGFQNVAAQQLMYYQ 421

[Close]

BLAST of Lsi07G006600 vs. NCBI nr
Match: XP_038896649.1 (oligouridylate-binding protein 1B-like isoform X2 [Benincasa hispida])

HSP 1 Score: 786.6 bits (2030), Expect = 1.2e-223
Identity = 405/457 (88.62%), Postives = 409/457 (89.50%), Query Frame = 0


Query: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60
           MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH
Sbjct: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60

Query: 61  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120
           IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 61  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120

Query: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 180
           VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSRGF
Sbjct: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGF 180

Query: 181 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 240
           GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSD+KSVVELSNGSS 
Sbjct: 181 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDTKSVVELSNGSS- 240

Query: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 300
           DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLH HFHSLGAGVIEEVRIQRDKGFGFV
Sbjct: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRIQRDKGFGFV 300

Query: 301 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 360
           RYNTHAEAALAIQMGNTR    G                                    R
Sbjct: 301 RYNTHAEAALAIQMGNTRSFLCG------------------------------------R 360

Query: 361 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 420
             +CSWGSKPTPPGT SNPLPLPAV STPGLSATDLLAYERQLAISKMGGVHAALMHPQG
Sbjct: 361 QIKCSWGSKPTPPGTASNPLPLPAVASTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 420

Query: 421 HLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           H P+KQAPMGMGAAAASQALYDGGFQN+AAQQLMYYQ
Sbjct: 421 HHPMKQAPMGMGAAAASQALYDGGFQNVAAQQLMYYQ 420

[Close]

BLAST of Lsi07G006600 vs. NCBI nr
Match: XP_008460320.1 (PREDICTED: oligouridylate-binding protein 1B-like [Cucumis melo])

HSP 1 Score: 781.2 bits (2016), Expect = 5.0e-222
Identity = 403/458 (87.99%), Postives = 409/458 (89.30%), Query Frame = 0


Query: 1   MQHQRLK-QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLK QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQ SD+KSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNN+APENNLQYTTVYVGNLAPEV+QLDLH HFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKF 360
           VRYNTHAEAALAIQMGNTR    G                                    
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCG------------------------------------ 360

Query: 361 RPQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQ 420
           R  +CSWGSKPTPPGTTSNPLPLPAV STPGLSATDLLAYERQLAI+KMGGVHAALMHPQ
Sbjct: 361 RQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSATDLLAYERQLAITKMGGVHAALMHPQ 420

Query: 421 GHLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           G  P+KQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 421 GPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 422

[Close]

BLAST of Lsi07G006600 vs. NCBI nr
Match: XP_004144435.1 (oligouridylate-binding protein 1B [Cucumis sativus] >KGN58457.1 hypothetical protein Csa_001287 [Cucumis sativus])

HSP 1 Score: 779.2 bits (2011), Expect = 1.9e-221
Identity = 402/458 (87.77%), Postives = 408/458 (89.08%), Query Frame = 0


Query: 1   MQHQRLK-QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLK QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQ SD+KSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNN+APENNLQYTTVYVGNLAPEV+QLDLH HFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKF 360
           VRYNTHAEAALAIQMGNTR    G                                    
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCG------------------------------------ 360

Query: 361 RPQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQ 420
           R  +CSWGSKPTPPGTTSNPLPLPAV STPGLSA DLLAYERQLAI+KMGGVHAALMHPQ
Sbjct: 361 RQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQ 420

Query: 421 GHLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           G  P+KQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 421 GPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 422

[Close]

BLAST of Lsi07G006600 vs. NCBI nr
Match: XP_022980633.1 (oligouridylate-binding protein 1B-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 770.8 bits (1989), Expect = 6.7e-219
Identity = 395/457 (86.43%), Postives = 408/457 (89.28%), Query Frame = 0


Query: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60
           MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH
Sbjct: 1   MQHQRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 60

Query: 61  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120
           +QVTEPLLQEVFGSIG VEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 61  VQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 120

Query: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 180
           VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSRGF
Sbjct: 121 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGF 180

Query: 181 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 240
           GFVSFRNQQEAQ+AINDL+GKWLGS+QIRCNWAAKGAGVNEDKQSSD+KSVVELSNGSSE
Sbjct: 181 GFVSFRNQQEAQSAINDLSGKWLGSKQIRCNWAAKGAGVNEDKQSSDTKSVVELSNGSSE 240

Query: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 300
           DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLH HFHSLGAGVIEEVR QRDKGFGFV
Sbjct: 241 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRTQRDKGFGFV 300

Query: 301 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 360
           RY+THAEAALAIQMGNTR    G                                    R
Sbjct: 301 RYSTHAEAALAIQMGNTRSFLCG------------------------------------R 360

Query: 361 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 420
             +CSWGSKPTPPGT SNPLPLPA+ STPGLSATDLLAYERQL++SKMGGVHAALMHPQG
Sbjct: 361 QIKCSWGSKPTPPGTASNPLPLPAMASTPGLSATDLLAYERQLSLSKMGGVHAALMHPQG 420

Query: 421 HLPLKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
           H PLKQAPMG+GAAAASQALYDGGFQNI++QQLMYYQ
Sbjct: 421 H-PLKQAPMGIGAAAASQALYDGGFQNISSQQLMYYQ 420

[Close]

BLAST of Lsi07G006600 vs. TAIR 10
Match: AT1G17370.1 (oligouridylate binding protein 1B )

HSP 1 Score: 657.9 bits (1696), Expect = 5.9e-189
Identity = 337/454 (74.23%), Postives = 366/454 (80.62%), Query Frame = 0


Query: 4   QRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQV 63
           Q+ +QQQ +MQQAL+QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNIHIQV
Sbjct: 6   QQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQV 65

Query: 64  TEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNW 123
           TEPLLQEVF   GPVE CKL+RKEKSSYGFVHYFDRRSA LAILSLNGRHLFGQPIKVNW
Sbjct: 66  TEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNW 125

Query: 124 AYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGFGFV 183
           AYAS QREDTS HFNIFVGDLSPEVTDAMLF CFS Y +CSDARVMWDQKTGRSRGFGFV
Sbjct: 126 AYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFV 185

Query: 184 SFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSEDGK 243
           SFRNQQ+AQ AI+++TGKWLGSRQIRCNWA KGA   EDKQSSDSKSVVEL++G SEDGK
Sbjct: 186 SFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGK 245

Query: 244 ESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYN 303
           ++ N EAPENN QYTTVYVGNLAPEV+Q+DLH HFHSLGAGVIEEVR+QRDKGFGFVRY+
Sbjct: 246 DTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 305

Query: 304 THAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFRPQQ 363
           TH EAALAIQMGNT H Y    Q+                                   +
Sbjct: 306 THVEAALAIQMGNT-HSYLSGRQM-----------------------------------K 365

Query: 364 CSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQGHLP 423
           CSWGSKPTP GT SNPLP PA    PG SA+DLLAYERQLA+SKM G++  + HPQG   
Sbjct: 366 CSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHA 419

Query: 424 LKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
            KQA   MGA  ++QA+YDGG+QN  AQQLMYYQ
Sbjct: 426 FKQA--AMGATGSNQAIYDGGYQN--AQQLMYYQ 419

[Close]

BLAST of Lsi07G006600 vs. TAIR 10
Match: AT1G17370.2 (oligouridylate binding protein 1B )

HSP 1 Score: 650.6 bits (1677), Expect = 9.4e-187
Identity = 335/454 (73.79%), Postives = 364/454 (80.18%), Query Frame = 0


Query: 4   QRLKQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQV 63
           Q+ +QQQ +MQQAL+QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNIHIQV
Sbjct: 6   QQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQV 65

Query: 64  TEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNW 123
           TEPLLQEVF   GPVE CKL+RKEKSSYGFVHYFDRRSA LAILSLNGRHLFGQPIKVNW
Sbjct: 66  TEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNW 125

Query: 124 AYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGFGFV 183
           AYAS QREDTS HFNIFVGDLSPEVTDAMLF CFS Y +CSDARVMWDQKTGRSRGFGFV
Sbjct: 126 AYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFV 185

Query: 184 SFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSEDGK 243
           SFRNQQ+AQ AI+++TGKWLGSRQIRCNWA KGA   EDKQSSDSKSVVEL++G   DGK
Sbjct: 186 SFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG---DGK 245

Query: 244 ESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYN 303
           ++ N EAPENN QYTTVYVGNLAPEV+Q+DLH HFHSLGAGVIEEVR+QRDKGFGFVRY+
Sbjct: 246 DTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYS 305

Query: 304 THAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFRPQQ 363
           TH EAALAIQMGNT H Y    Q+                                   +
Sbjct: 306 THVEAALAIQMGNT-HSYLSGRQM-----------------------------------K 365

Query: 364 CSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQGHLP 423
           CSWGSKPTP GT SNPLP PA    PG SA+DLLAYERQLA+SKM G++  + HPQG   
Sbjct: 366 CSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHA 416

Query: 424 LKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 458
            KQA   MGA  ++QA+YDGG+QN  AQQLMYYQ
Sbjct: 426 FKQA--AMGATGSNQAIYDGGYQN--AQQLMYYQ 416

[Close]

BLAST of Lsi07G006600 vs. TAIR 10
Match: AT3G14100.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 640.2 bits (1650), Expect = 1.3e-183
Identity = 333/458 (72.71%), Postives = 368/458 (80.35%), Query Frame = 0


Query: 2   QHQRLKQQQALM-QQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 61
           QHQ+ +QQQA+M QQAL+QQ SLYHPG+LAPPQ+EP+PSGNLPPGFD STCRSVYVGNIH
Sbjct: 8   QHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIH 67

Query: 62  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 121
            QVTEPLLQE+F S GPVE  KL+RK+KSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 68  TQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 127

Query: 122 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 181
           VNWAYA+ QREDTS HFNIFVGDLSPEVTDA L+  FS +SSCSDARVMWDQKTGRSRGF
Sbjct: 128 VNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGF 187

Query: 182 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 241
           GFVSFRNQQ+AQ AIN++ GKWL SRQIRCNWA KGA   +DK SSD KSVVEL+ GSSE
Sbjct: 188 GFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSE 247

Query: 242 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 301
           DGKE++N E PENN Q+TTVYVGNLAPEVTQLDLH +FH+LGAGVIEEVR+QRDKGFGFV
Sbjct: 248 DGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFV 307

Query: 302 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 361
           RYNTH EAALAIQMGNT+ PY    Q+                                 
Sbjct: 308 RYNTHPEAALAIQMGNTQ-PYLFNRQI--------------------------------- 367

Query: 362 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 421
             +CSWG+KPTPPGT SNPLP PA    PGLSA DLL YERQLA+SKM  V+ ALMH QG
Sbjct: 368 --KCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHQQG 427

Query: 422 HLPLKQAPMGMGAAAASQALYDGGFQNI-AAQQLMYYQ 458
             PL+QA  G+ AA A+ A+YDGGFQN+ AAQQLMYYQ
Sbjct: 428 QHPLRQA-HGINAAGATAAMYDGGFQNVAAAQQLMYYQ 427

[Close]

BLAST of Lsi07G006600 vs. TAIR 10
Match: AT1G54080.1 (oligouridylate-binding protein 1A )

HSP 1 Score: 598.6 bits (1542), Expect = 4.3e-171
Identity = 305/459 (66.45%), Postives = 355/459 (77.34%), Query Frame = 0


Query: 2   QHQRLKQQQALMQQALLQQQ-SLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 61
           Q Q+ + QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNIH
Sbjct: 12  QQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIH 71

Query: 62  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 121
            QVTE LLQE+F S GP+E CKL+RK+KSSYGFVHYFDRR A++AI++LNGRH+FGQP+K
Sbjct: 72  TQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMK 131

Query: 122 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCSDARVMWDQKTGRSRGF 181
           VNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FS ++SCSDARVMWDQKTGRSRGF
Sbjct: 132 VNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGF 191

Query: 182 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSNGSSE 241
           GFVSFRNQQ+AQ AIN++ GKW+ SRQIRCNWA KGA   EDK SSD KSVVEL+NGSSE
Sbjct: 192 GFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSE 251

Query: 242 DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFV 301
           DG+E  N +APENN Q+TTVYVGNL+PEVTQLDLH  F++LGAGVIEEVR+QRDKGFGFV
Sbjct: 252 DGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFV 311

Query: 302 RYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQGEKFR 361
           RYNTH EAALAIQMGN + P+    Q+                                 
Sbjct: 312 RYNTHDEAALAIQMGNAQ-PFLFSRQI--------------------------------- 371

Query: 362 PQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALMHPQG 421
             +CSWG+KPTP GT SNPLP PA  S P LSA DLLAYERQLA++K        MHPQ 
Sbjct: 372 --RCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQA 426

Query: 422 HLPLKQAPMGMGAAAASQALYDGGFQNIAA--QQLMYYQ 458
              L+QA +G+  A  + A+YDGG+QN+AA  QQLMYYQ
Sbjct: 432 QHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQLMYYQ 426

[Close]

BLAST of Lsi07G006600 vs. TAIR 10
Match: AT1G54080.2 (oligouridylate-binding protein 1A )

HSP 1 Score: 592.8 bits (1527), Expect = 2.3e-169
Identity = 305/463 (65.87%), Postives = 355/463 (76.67%), Query Frame = 0


Query: 2   QHQRLKQQQALMQQALLQQQ-SLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 61
           Q Q+ + QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNIH
Sbjct: 12  QQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIH 71

Query: 62  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 121
            QVTE LLQE+F S GP+E CKL+RK+KSSYGFVHYFDRR A++AI++LNGRH+FGQP+K
Sbjct: 72  TQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMK 131

Query: 122 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSGYSSCS----DARVMWDQKTGR 181
           VNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FS ++SCS    DARVMWDQKTGR
Sbjct: 132 VNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGR 191

Query: 182 SRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDSKSVVELSN 241
           SRGFGFVSFRNQQ+AQ AIN++ GKW+ SRQIRCNWA KGA   EDK SSD KSVVEL+N
Sbjct: 192 SRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTN 251

Query: 242 GSSEDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKG 301
           GSSEDG+E  N +APENN Q+TTVYVGNL+PEVTQLDLH  F++LGAGVIEEVR+QRDKG
Sbjct: 252 GSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKG 311

Query: 302 FGFVRYNTHAEAALAIQMGNTRHPYWGRTQLIMADENLGLGLPLNANYSILLSSVAVVQG 361
           FGFVRYNTH EAALAIQMGN + P+    Q+                             
Sbjct: 312 FGFVRYNTHDEAALAIQMGNAQ-PFLFSRQI----------------------------- 371

Query: 362 EKFRPQQCSWGSKPTPPGTTSNPLPLPAVGSTPGLSATDLLAYERQLAISKMGGVHAALM 421
                 +CSWG+KPTP GT SNPLP PA  S P LSA DLLAYERQLA++K        M
Sbjct: 372 ------RCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------M 430

Query: 422 HPQGHLPLKQAPMGMGAAAASQALYDGGFQNIAA--QQLMYYQ 458
           HPQ    L+QA +G+  A  + A+YDGG+QN+AA  QQLMYYQ
Sbjct: 432 HPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQLMYYQ 430

The following BLAST results are available for this feature:

BLAST of Lsi07G006600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQI9	8.3e-188	74.23	Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 ...	[more]
Q9LJH8	1.8e-182	72.71	Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 ...	[more]
Q9M427	2.1e-170	69.58	Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE...	[more]
Q9SYG4	6.0e-170	66.45	Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 ...	[more]
Q6YZW2	1.2e-133	57.23	RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1...	[more]

BLAST of Lsi07G006600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDG5	2.4e-222	87.99	oligouridylate-binding protein 1B-like OS=Cucumis melo OX=3656 GN=LOC103499180 P...	[more]
A0A0A0LCP1	9.1e-222	87.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645950 PE=4 SV=1	[more]
A0A6J1IZV8	3.2e-219	86.43	oligouridylate-binding protein 1B-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1GUK1	3.2e-219	86.65	oligouridylate-binding protein 1B-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1D4M7	4.7e-218	86.27	oligouridylate-binding protein 1B-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Lsi07G006600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896645.1	1.6e-225	88.84	oligouridylate-binding protein 1B-like isoform X1 [Benincasa hispida]	[more]
XP_038896649.1	1.2e-223	88.62	oligouridylate-binding protein 1B-like isoform X2 [Benincasa hispida]	[more]
XP_008460320.1	5.0e-222	87.99	PREDICTED: oligouridylate-binding protein 1B-like [Cucumis melo]	[more]
XP_004144435.1	1.9e-221	87.77	oligouridylate-binding protein 1B [Cucumis sativus] >KGN58457.1 hypothetical pro...	[more]
XP_022980633.1	6.7e-219	86.43	oligouridylate-binding protein 1B-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Lsi07G006600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17370.1	5.9e-189	74.23	oligouridylate binding protein 1B	[more]
AT1G17370.2	9.4e-187	73.79	oligouridylate binding protein 1B	[more]
AT3G14100.1	1.3e-183	72.71	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G54080.1	4.3e-171	66.45	oligouridylate-binding protein 1A	[more]
AT1G54080.2	2.3e-169	65.87	oligouridylate-binding protein 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 138..211 e-value: 6.9E-24 score: 95.4 coord: 53..122 e-value: 4.8E-17 score: 72.6 coord: 259..329 e-value: 3.2E-11 score: 53.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 54..120 e-value: 5.8E-13 score: 48.5 coord: 260..314 e-value: 1.2E-10 score: 41.0 coord: 139..209 e-value: 7.0E-18 score: 64.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 137..215 score: 17.216459
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 258..347 score: 12.98672
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 52..126 score: 15.101589
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..135 e-value: 6.3E-23 score: 83.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 136..214 e-value: 3.3E-24 score: 87.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 215..329 e-value: 4.3E-17 score: 64.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..250
None	No IPR available	PANTHER	PTHR47640:SF34	OLIGOURIDYLATE-BINDING PROTEIN 1B-LIKE ISOFORM X1	coord: 2..324
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 2..324
None	No IPR available	PANTHER	PTHR47640:SF34	OLIGOURIDYLATE-BINDING PROTEIN 1B-LIKE ISOFORM X1	coord: 360..457
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 360..457
None	No IPR available	CDD	cd12352	RRM1_TIA1_like	coord: 54..124 e-value: 2.84728E-36 score: 126.263
None	No IPR available	CDD	cd12619	RRM2_PUB1	coord: 138..212 e-value: 6.23298E-51 score: 164.988
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 51..215
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 245..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G006600.1	Lsi07G006600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding