Lsi07G005920 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G005920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Eukaryotic initiation factor 4A
Location	chr07: 6285937 .. 6296070 (+)
RNA-Seq Expression	Lsi07G005920
Synteny	Lsi07G005920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAGAGGCCGAAGAATAGCTTGCTCTTCCTCCTCCTCTCTTCTTCTTCTTGTTGAAAGTATTAAACCCCAAAGAAGGCGAACTCTTCTTCACGAAGTGATCTTCAGATAAACCATAACGGCGAATCAGAATGGGAAACCAGAAGCAAAAGTGGACGTCAGAGGAGGAAGACGCACTTTTGGCGGGCGTCAATAAGCACGGTCCTGGAAAGTGGAAGAACATTCTCAAAGATCCTGATTTCGCTCCGTCTCTCACTCATCGCTCTAACATTGATCTCAAGGTCCCTATTCAACTATCTATTCCTTTCAATTCCCTATATGTGTGTTTTTTGCACTTGGGTTACCTGTTTGGATTGATATTTAGGGTTTTAATTAAGAAACTCGAGGGGGGACTGACTGAAATATTGCGGGATTTTTGTTCAAGTTTAGCTTTGGTTTGTTTAGAATCAAATGGTATTCGCCTGGTTTACTTGCAATTTCTATAGCTAAACTCAGTTGGTTGAGTGGTTTAACATGGAAGAAATTGGGTTTATTCTTAAATTTTCAAACAAATATATATATTTCTCCGATGCTCTCCAACAGTTTTCTACGTTGATTTTTGGACTGAACTTTACTTTATGGTTTGCCCGTAGTTTTGCTTTTGATCAACTGAGTAATGTAAGAAGATTTTCTTCAGAAAGTGGAACTTGAGGTGGTATTTAAATATTAAATATATGATGGCGCGTTTTTTAGCTTGCTTCAATGGAAGCCATGTACTTGGTTGGTTGACACTTGCTGCCATCTAGGGGCGATAATAAATTCATAGGGTAGGGTTGGCTTGTGAGGGGAGATTCATGGCAATGGCCATTGATTACCCTAAGGCTTAAAGTTATGTCTGGATAACGCTATTCTAGTGGACCCCAAGTAACTGTGGCCTTGGATGAACTGTATAAGACCTTCTTCGAGTCTGTTCCTAGATGCATCTTTGAGATTACTTATGTTCCAGTATTACTTGAAACAATGATGATATGGGTTTTATTCGCCTCAAATTTAAGGTTTGGATATAAGTAAATCCCCTTGATTAAAAATCTTATGTCTTTCCTGTAACTTTAAAATAATGTGTACTCGTAACAGCATGACTATCTAACTAATAATTTCTGCAACTATTTATCTCTCTCGTGTTGCTTATGTACCCAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGTTCCTAAAGCAAAAGCTATTGTTGCTGCTATTTCTAACAACCAAAGCTCTGCTCCTGCTAAGCTTAATGCATCTGCTGATACTGCAGGGGATGATACACCAAACAACAGCACACAAGATGGGAAAAATGTTCCAAGGTCTGTCTCTCTAACTGTTTAGGTATTTTACATTTGTAGCATAGAAGTCATCTGTTTATTATTGTTAGTATTATTTTCTTGGACCTCATGGGAGAGGGGGGAGCGTGTTTATAAAACCAGCTTTCCCCCTCCCTCCACTCACCACCACCTACCCCACCTCAGTCCACAAGCGAAGGAAAGATAAAAGAGTAGTTTATAAACACGTTGATGGAAAATGGAATATCTGATGAAATAATTTTAGATAGAAATGGAATAGAAACCCAAATCATATTAATCTTATAGTATTTTATTCGTCAACAAAATATTATAGTACATTTTGTTTGCTCTATTATAAATTATGATTGGGTCTGTGGAATGTTGTTTTTCTTTACTATTGACAATTGTAGACAGTGGAGTCTTGTGACTTTTTTTTACACATGAGAAAATTCATCTTTTATTTATTTTTTTTCCACCTTTTTTTCCCTCTCTTTCCCTGATTGAGAAAATTCACCTTTTACTTTTGTAATTGAAAGGAACGAATTGTATTTAATCTACCTCAAGAGAAATTTTGCCAGTAGAGAAATCCCTGAAGGGTGTTGTGATTGACCTTCTTTTCATATTCATTTATTATTTCGTTGAAGTCTCATCATTGGTCTTATAATGATCTGTTGACCAGGTATTATTCAATGATTTTTGAAGCCCTTTCAACTATAAAAGATTCTAATGGATGTGACATAGGTACAATTGTTAACTTTATTGAGGTAAGATGGCAGTGTCTTTTCGTTTCTTCTCTTCTTTTCTTTTATTTTTATTAAAGGAGCGATGGCAGTACTCTTATTTGAGACAATGATCTGCATGGAGATCATGATTATATTTTTACTCTGGCCAAACACTCAGTTTTCCGAGAAGGTTATTTTAACCTACCATTTCCACACTTTCGTTATGTATTTGTGAAATATGGGGTTGCTTCTTGCTTTCTTAGCTTCTTTGAACTATTTTCGTTATTCATTAACATCATTGATCAATGTTTATGTTCGTATCACATGATATTTCAACCGTTGATTTCACATGATGCAGCAAAGGCATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCGAAGTTGAGGAGGCTTGTTTCACAAGGGAAGCTTGAAAAGGTGAACGATCTCTTCATTTTCATACCGAATCAGTTCAGAAGGCAATTTGTTGGTTCTATGTTATTTTATATGCTTTACTAAGTTATGTAGTTTGACTCTTATATATGCTTCTCTTATACGTATATCCCCTTCCCCCACTAAAAGAAAACCTTGTATCCTTATGGGAAAATTTAAGTGCGTGTTTGGGATAAGGAGTAGAATAGTGAGGAGTAAGGATTTATGAAGTTTAGAGAGTTCTGAACTCTTGTAAGGAGTGGATAAGATATCAAATTGATGTTTCTTAGTAGTGAGACCCACTAACTTCTTGGATCAAACAAGGAGTGGAGTTCACAACTCCTACTTCCTAACATCTTGGGCCAAACATACCCTAAGATGTTACACATACATTTGAGGAAAAGTTACGCTTTTGGTCCCTAAGGTTTGGGACTTAGGTTAGGTAGCATTTTGGTCCATGCAGTCAATTTTCTGTTACTATAGTTTATAGCTTTAATGAAAGATGATTCGGCACTTTTTTAAAATAAATTAAAATAAAGTTCTTTTTCCTTCTCTTTTCTCTTTCTCCCTCTTCCCATCCTCTTCCCTCCCCCATCCATGGCCACTGCCACTGCTCCCACCGTTGTCCATTGTCCCTTTTTTTTCCCTCTTCCTTTCATTTTCTTCTCTTATCTTTTCCATTTCTTCTTTCCTCGTCTTCTCTCTCCTTCCTCCTCATTCCTCCCCTTCCCACGTCTAATGTAAGGAAAGGAAAAGGAAATCCCGTTTCAGATGAAACAGAGGAGTTTCAAGCATCTCCCTCGTTTCTGTGGCGAGGATGTCCCTTTTTTTTTTGGTTAAAATAATTTCTCTTTTATTTAAAATAATAATAATAAATGTGAGGAGAGAAGGGAAAGAGAAAGAAGAAGAAGACAGTAAGAAGAGGAAAGGAGAGAAAAGAACAAAGAAGAAAAGCGAAGATAAAAGAAAGAGGTGAGGGCAGTGGCGGTAATGCCCATGGATGGGAGGAGGGAGAAAGAAGAGATAGAAAAAAAGAAAATATTATTTTTATTTAAAAATGTAAAAAATAATTTTAATTAAAAAAAAGTCCCATGTCGCTTTTGTTATTATACTTATGTTTGAACTACATTGTGCTTCCACTTTTCAACCAATCACGAGGAGTTTCTTGACCTTTTTCATTGTTAACAATCGATATTAACAACTTGGGGATTAGCTGGTCTTTATATTATTGATAAGTAGGAGTTATGTGATGACATGGGATTGCGGTTGTGAACAGCTTTGTAGGAGTTTAAATATTTGTTTGAAATTTTTATGCGTGTGTTTCGTTGTTATCTCTCTGCCACATTACAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCGTTGGCAGTTAAAACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACTACGGGAGCGGTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAAGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCGATGCTACAGATTATAAAAGAGATGTATGAAAAATGTAAGTGAAGTGTTCATTCTATTCCTCATGAAGTACTGCCGCTTTGGAACTCTTCTAAAACAACCTCTCTTTTTCTTTGTGTAATGTCACAGGTTCTCGTGGTGAAATTATTCTCTTGGCTTAGATCACTTGTAAGTTCAATGGCCAATCCTTTGTTGTTTTTGGAATTCGCATGTAAATTCTTCAATCCAGTGGAATTTTCAGCCTTCTCTATGCCTCCAAATTCCACGTTGCCTTTTTTTTGTTTTCCTTTCTCGGGACGAAATCGAATTAATTTATAGTTAGGTATACAAATATTTATCAAGATGTTCTTCAAATGAACTTGTGTTTGAGTTGGAATTTGGTTAGACAGAGTTACAACAAACCCAAATTCCCTAAGAAGTGGTTAGTCGTTTTTGGTTTGGTAGTTTCCTCCCAGGATATTAAGGTCATAATTGATTCATTTTTCCAAAAATAGTTTTTTTTTTTTCAAAACAAAAAACAAATAAGAAACACAATAACGTTGGAAACAACAATTATTCGTTGCATTTAAAACAAAGTAAGAAATTTGGGTGTAATGTTGGATATTTTTGGCTAATTTGATTAACTTCTCCTTGAATTTTGCATGATTTGTCAACTCTTTTCAATCAGCCTATCCTTTTCAACTGCTGAGGTGAAGTTGCAAGATCTTTTAATTTTGAGTTAATAAGCAGAAATTACAACCTCGATTACTGCTTTATTAAATTCGTTAAATTCGAGAACTTAAAACAACATATCAAGCCATTTTGCTAAATATTAATAATAATAAACTAAGCGAAAATCCAAAGCAAGCTATTTTCTTGTGGGACTTTATGTTAATCTAACTATGAAGACAATTTAGAGCTATTGCTATTAAAAAAAAAAAACAAAGAAAATTTTCCCCATCACTATTGTTTTATGTGCTAGAAAAGTCTTAACTTGGGTGGTTTTTTAGTAAAATAAGTTTGGAAAAGTAAATAATGTCGTCACCTTGTTAATAGTGGAATGAAAAAAAATACATACGTAACACTTTAATGAAGAAAGTTTGCTTTATCAATTTTATTTTTTTAAAAAATATTTAACACTCAAAGGGCACATAAGAGGTTTGAAATGCTAGTTAGTTGAAATATATTCATAAATTCAAAAAGTTATATTTGTATATGTTAAAAATAATATAAACTATTAGGGTATTGTTTTTTTTTTTGTTAAAACTATTAATATACATAGAATGTAATTTATAGATATTATAAATTATCAATTAGGTGTTTAAAATTAAAGTTAAGATTTAAAAAATGTGATGTATATTCCACAGATGTATTATAATTTATTATTATTGAAATAGTAATTTAATAATTATAATTTAAATTAACGAAATGACATTTTTTAAACTATAATGATAGCCCAAAAACGTAGATATGAAAAAAAAGAAGGACATGCACACGTTCAATCACACGCAAGTCACGTGACTAATGATTACAAAGTCCATATTCCAAGGGTATTAAAGTAATAAAAAATAAAGTAAGGGTAAAGATGTAATTTGATACCGCAGATTTGGAGCAGAAGCCGAAAGGCCAGAGGGCCGCCTTAGAAAACCTAACGCCCTCGCATTATAACTTCAGTCCTTAAGCATCAGCCTCCTTTTCAACTCCACGGCGCAGATCCGAGGAGTTTGTGAATCTCTCGCTATCTTCCAACGCTTTCTAATCTTCTTCCAATCTTTCGTCTCTCACTGATCTACAGGTTTCTCTCTACCTCCTTTCTTATATCTATTGTTGATATCGATTTCTATTGATTCACCGTGAATGCTCTGTTTTTACTTTTCTTAATCTTCCCGGTGACCTCTTGCTTGGATTTAGTCAGTTTTTGTCTTGTTGTAATCTCTGAAATCGATTTCTGCTGGATCTGGTATCGGTTTCTACGTTTTTTTTGTCGAGCTTTTTGTTATTGTTTTTTTGTTTGAACGTCGATCGTCTCTGTGTGTTTTTTGTTTGAGAAATCTGCTGCTTGTGAGATATGAATAGGTTTTAGATGATTATTAAAGCGTTTTTTAAGTGTATATTAAGATTAGTTGATGTTTTGGACATGCGCTGTGAGATTATGTGGTATGGAGTTTAGAAACTTGACTTACTTGGCTAATCTTTTTCTCTAATGCCTCTCGGGAGGTGGATGATGCGGACGTAGCAGTATCGGAGGAGATTTTCTTCTCTGAGGTGCTTCTGTTGTAATAATTTGTTCGATTGCTCATATGACACACTCGCGCTGCTTTGTATATTGTTTTAACGTTTCATTTTGATAATATCTCCACGCGAAATATCCAATGAGTCTTTTCCCCTTAGTTTTCTTCTAATATTTTTTTCTTTATTATTTGATTCTAATCCAAGCGGAAACTTTCCATGCTTTCTGTACGTTCCACCATTTATTCATGAAGTTTGGGGAGCGGTGAAGTGGCTTCTGATGCCGGAAGATTTTACTGATACATCAGCTAGCCATTCTCATTTTTTATTAACATCTCCCGAAAAAAATAGACAGAATTTTAATGCTTGCACTCTTCTTTGTCTGGTGTGCAAGTTTGGCTTTCTGTTACATTTTCTCGTCCACCTTTTTACCCTCCGATTCGGGTCAAGAAAGTTAAAAGTTAATTTCTTCATCTTGTTTGGAACCAGAAAGTTCTGTAATGGATGTACATTAAACTTTGTGTTTTGATGTTTGCTAGAAAAGAAATTTACAAATATAGGCTTTTTATTATTAATTTATCAGCAGCAAATTGAAATATGACAGGGTTATATAAGTAATTAGCCTCCAAATTCTATGAAATCCTGCAAACCATTCTTTCTTCTCATATAATAACAAATAACAGAGTTCGTTTGTACTCTATGATGAATTTGGAATCCCTCAAGACCAGGAAGAACCTAATAGATCATCAGGGTTTGATATCATTGGAAATTTCCACGGATCAAACATGTTTAATCCTTGTTTTATTTTATTTTTTCCACGTGGCATGTGTTCAGAATTTTGTGCAGTCTTCTTTTCCTCTATTAACGTTTACATTTGGCAATGCTGAAATTAAAGGTCGTGTGAGCTTGAGTGAGCTTCTTGTTACTGTCTTTGTAACAATTTTTTAACCACAAAGTACCCCCATGTTGTATATGTTGTCTGTATACAGATATGGCTGGTTTGGCTCCAGAAGGTTCTCAATTTGATGCTCGTCAGTATGACACGAAAATGAACGAGTTGTAAGTTTTCTGTTTTAACTTTTCTGGACATCCTAGACGATGTGTATGCAATATTATTAAGATTCATTGTATTTTATCATCTTGATTTTTTTGTAACCTCCTAATCCTAGTTTCCTTCTTATTTGTTATTATCTCTTGGTCAATGTAGACTTTCGGCTGATGGACAAGATTTCTTCACATCATACGATGAAGTTTACGATAGTTTTGATTCTATGGGCCTGCAAGAAAATCTTCTCAGAGGCATCTATGCCTATGGTTGGTATATAGCACTATTTATTTTTCTCCTTAAGTTGTTTATTGTTTTGTTTTTCCTATGTAACAATTAATAATTAAGCAAACTGTATGGTTTTCTAAGTAGTAGTTGTTTACTCTGTTGCTCTGGCTGGTTTGCAATATATTCTATTGTAATTTGAATGTCGTTTTTAAAGGTTTTGAGAAGCCATCTGCAATTCAGCAAAGGGGAATTGTTCCTTTTTGCAAAGGGCTTGATGTGATCCAACAAGCCCAGTCTGGAACAGGGAAGACTGCTACTTTTTGCTCTGGCATTTTGCAGCAACTTGATTATGGTCTCGTTCAATGCCAGGCTTTGGTCCTGGCACCCACTAGGGAACTTGCACAACAGATTGAGAAGGTTATGCGAGCCCTTGGTGATTATCTTGGTGTGAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTACGTGAAGACCAACGTATTCTTCAAGCTGGTGTTCATGTAGTTGTTGGTACACCTGGTCGTGTGTTTGATATGTTACGTAGACAGTCACTTCGTCCCGACTACATTCGGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGTGGATTTAAGGATCAGGTTTGTAATTTTACTTGTACTTTCATGACTCTATCGTCCTGCATGCATGGAAGCTTTGTTTTAGTTTATTACACTGTTTTTAATTTTTCCCGTCTCTCTCTCTCTCTCTCTCTCTCTCCACTCTTTAAGATGGCAATACGTTGTTGCCTGGAGTGTGTTATAAATTTAGTTTAGCTTATGCCAATATTATTTCCACCATGATAAAGAGCATTCTGAGGAGTAAGTCATCTATACTTCTTTGGCGTTGTGATGTAAGTTGTAAGATATGAACAACAGAAGAGTTTGATCATTGGCTCGCTTTAAATTTTTTATGGTATGCTGCTTTTCTTGTTTTCCTTTATTAAAGTATTTGCTTTCTTATTTTTCATCAAGAATTTTGAAGTGAATCAGTGATTATGGATTGTCATCCTGACAGTTTGTTTGATAAGTTGTCACTTGTCAACAAGACATGTTATGAACTGTTTAAGTTCTCTGTTTTTAGTTGCATAAAAATTTCTCGAAGATGTAGAAAATGATGTAGGATGCTTCCAAATCCAATGTTCTCTCTTCAATCTTTTACTGAGAATTATTGGTAATGAAGTTTGTAGCTGTTCGCTTATTTTGCTCTCCATGTGGTGTGATTTGTTATATCTATTTTAATTCTATACTTCATCATTCTTCAGTGTACAGAATCCGTATTCAGGAATCATAGTTTTGTACTTTGCTCATTGTCTTGGAACTGTTCGCATATTTGAGTTGTGCGGTTTCAATCTTCTAACTGTCCTTATACATGTTTATCCCCATTGCAGATTTATGATATTTTCCAGCTGCTACCATCCAAGATTCAGGTTGGGGTCTTCTCTGCTACAATGCCTCCTGAAGCCCTTGAGATCACCAGGAAGTTCATGAACAAGCCCGTTAGAATTCTTGTAAAGCGTGATGAGCTGACTTTGGAAGGTATCAAGCAGTTCTATGTTAATGTTGACAAGGAAGACTGGAAGCTTGAGACTCTCTGTGATCTTTATGAGACTTTGGCCATCACCCAGAGTGTTATCTTCGTCAATACTCGACGTAAAGTTGATTGGCTCACTGATAAGATGCGGAGCCGTGACCACACTGTGTCTGCTACCCATGGTGACATGGACCAGAACACCCGAGACATTATTATGCGTGAGTTCCGTTCAGGTTCTTCAAGGGTTCTGATTACCACTGATCTATTGGCTCGTGGTATCGATGTCCAGCAGGTTTCTCTCGTTATTAACTATGATCTGCCGACACAACCGGAGAACTACCTTCATCGTATAGGAAGAAGTGGACGTTTTGGAAGAAAAGGTGTTGCGATCAACTTTGTAACGACAGAGGACGAAAGAATGCTATTCGACATTCAGAAGTTCTACAATGTGGTAATTGAAGAGCTGCCAGCCAATGTTGCTGATCTGCTGTGAGAAGAGAAGGGAAATACTGTGGTAGACTGAGGCGTGGTTTTCTCCTTGAAGTACTCAAGCTTTTTCACCTCTTTTATCTTTTTGGCTCTACTTTTTTAGTGTCTTAAATTAAAATATTCTTGAACCTATCTGACCTTGAAAATGGTGTGCCCTACACCACTGCAATATAAAAGATTGTCAAATTGCCTTTCTGGTAAATTATGGGCCTTTTTGTTTCTGTTGGGGTTTTGTATTGTATTTGAGGTTTTTTTCTGTTGCCTTATTTTTCCAAGTTATAAAAACTCGGTTGTCTTTGCAATATTAGGTCTTTGGCTAGTTTCTTCGTTCGTTCTTTTTTTTTTTGGGTACATTTGTTGTGTCTCAGCAAGCTGCCATTGTTCTTTTTTATTGACTGTTGATAAACGTTAGCACTTGCTAGATCTCAATCCTACATTACTTTCACCTGAACTTACATAAAAATGTTCTCGAGTTTCAAGC

mRNA sequence

CAAAAAGAGGCCGAAGAATAGCTTGCTCTTCCTCCTCCTCTCTTCTTCTTCTTGTTGAAAGTATTAAACCCCAAAGAAGGCGAACTCTTCTTCACGAAGTGATCTTCAGATAAACCATAACGGCGAATCAGAATGGGAAACCAGAAGCAAAAGTGGACGTCAGAGGAGGAAGACGCACTTTTGGCGGGCGTCAATAAGCACGGTCCTGGAAAGTGGAAGAACATTCTCAAAGATCCTGATTTCGCTCCGTCTCTCACTCATCGCTCTAACATTGATCTCAAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGTTCCTAAAGCAAAAGCTATTGTTGCTGCTATTTCTAACAACCAAAGCTCTGCTCCTGCTAAGCTTAATGCATCTGCTGATACTGCAGGGGATGATACACCAAACAACAGCACACAAGATGGGAAAAATGTTCCAAGGTATTATTCAATGATTTTTGAAGCCCTTTCAACTATAAAAGATTCTAATGGATGTGACATAGGTACAATTGTTAACTTTATTGAGCAAAGGCATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCGAAGTTGAGGAGGCTTGTTTCACAAGGGAAGCTTGAAAAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCGTTGGCAGTTAAAACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACTACGGGAGCGGTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAAGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCGATGCTACAGATTATAAAAGAGATGTATGAAAAATATATGGCTGGTTTGGCTCCAGAAGGTTCTCAATTTGATGCTCGTCAGTATGACACGAAAATGAACGAGTTACTTTCGGCTGATGGACAAGATTTCTTCACATCATACGATGAAGTTTACGATAGTTTTGATTCTATGGGCCTGCAAGAAAATCTTCTCAGAGGCATCTATGCCTATGGTTTTGAGAAGCCATCTGCAATTCAGCAAAGGGGAATTGTTCCTTTTTGCAAAGGGCTTGATGTGATCCAACAAGCCCAGTCTGGAACAGGGAAGACTGCTACTTTTTGCTCTGGCATTTTGCAGCAACTTGATTATGGTCTCGTTCAATGCCAGGCTTTGGTCCTGGCACCCACTAGGGAACTTGCACAACAGATTGAGAAGGTTATGCGAGCCCTTGGTGATTATCTTGGTGTGAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTACGTGAAGACCAACGTATTCTTCAAGCTGGTGTTCATGTAGTTGTTGGTACACCTGGTCGTGTGTTTGATATGTTACGTAGACAGTCACTTCGTCCCGACTACATTCGGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGTGGATTTAAGGATCAGATTTATGATATTTTCCAGCTGCTACCATCCAAGATTCAGGTTGGGGTCTTCTCTGCTACAATGCCTCCTGAAGCCCTTGAGATCACCAGGAAGTTCATGAACAAGCCCGTTAGAATTCTTGTAAAGCGTGATGAGCTGACTTTGGAAGGTATCAAGCAGTTCTATGTTAATGTTGACAAGGAAGACTGGAAGCTTGAGACTCTCTGTGATCTTTATGAGACTTTGGCCATCACCCAGAGTGTTATCTTCGTCAATACTCGACGTAAAGTTGATTGGCTCACTGATAAGATGCGGAGCCGTGACCACACTGTGTCTGCTACCCATGGTGACATGGACCAGAACACCCGAGACATTATTATGCGTGAGTTCCGTTCAGGTTCTTCAAGGGTTCTGATTACCACTGATCTATTGGCTCGTGGTATCGATGTCCAGCAGGTTTCTCTCGTTATTAACTATGATCTGCCGACACAACCGGAGAACTACCTTCATCGTATAGGAAGAAGTGGACGTTTTGGAAGAAAAGGTGTTGCGATCAACTTTGTAACGACAGAGGACGAAAGAATGCTATTCGACATTCAGAAGTTCTACAATGTGGTAATTGAAGAGCTGCCAGCCAATGTTGCTGATCTGCTGTGAGAAGAGAAGGGAAATACTGTGGTAGACTGAGGCGTGGTTTTCTCCTTGAAGTACTCAAGCTTTTTCACCTCTTTTATCTTTTTGGCTCTACTTTTTTAGTGTCTTAAATTAAAATATTCTTGAACCTATCTGACCTTGAAAATGGTGTGCCCTACACCACTGCAATATAAAAGATTGTCAAATTGCCTTTCTGGTAAATTATGGGCCTTTTTGTTTCTGTTGGGGTTTTGTATTGTATTTGAGGTTTTTTTCTGTTGCCTTATTTTTCCAAGTTATAAAAACTCGGTTGTCTTTGCAATATTAGGTCTTTGGCTAGTTTCTTCGTTCGTTCTTTTTTTTTTTGGGTACATTTGTTGTGTCTCAGCAAGCTGCCATTGTTCTTTTTTATTGACTGTTGATAAACGTTAGCACTTGCTAGATCTCAATCCTACATTACTTTCACCTGAACTTACATAAAAATGTTCTCGAGTTTCAAGC

Coding sequence (CDS)

ATGGGAAACCAGAAGCAAAAGTGGACGTCAGAGGAGGAAGACGCACTTTTGGCGGGCGTCAATAAGCACGGTCCTGGAAAGTGGAAGAACATTCTCAAAGATCCTGATTTCGCTCCGTCTCTCACTCATCGCTCTAACATTGATCTCAAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGTTCCTAAAGCAAAAGCTATTGTTGCTGCTATTTCTAACAACCAAAGCTCTGCTCCTGCTAAGCTTAATGCATCTGCTGATACTGCAGGGGATGATACACCAAACAACAGCACACAAGATGGGAAAAATGTTCCAAGGTATTATTCAATGATTTTTGAAGCCCTTTCAACTATAAAAGATTCTAATGGATGTGACATAGGTACAATTGTTAACTTTATTGAGCAAAGGCATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCGAAGTTGAGGAGGCTTGTTTCACAAGGGAAGCTTGAAAAGGTTCAGAATTGCTACAAAGTAAAGAAAGACAATTCGTTGGCAGTTAAAACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACTACGGGAGCGGTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAAGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCGATGCTACAGATTATAAAAGAGATGTATGAAAAATATATGGCTGGTTTGGCTCCAGAAGGTTCTCAATTTGATGCTCGTCAGTATGACACGAAAATGAACGAGTTACTTTCGGCTGATGGACAAGATTTCTTCACATCATACGATGAAGTTTACGATAGTTTTGATTCTATGGGCCTGCAAGAAAATCTTCTCAGAGGCATCTATGCCTATGGTTTTGAGAAGCCATCTGCAATTCAGCAAAGGGGAATTGTTCCTTTTTGCAAAGGGCTTGATGTGATCCAACAAGCCCAGTCTGGAACAGGGAAGACTGCTACTTTTTGCTCTGGCATTTTGCAGCAACTTGATTATGGTCTCGTTCAATGCCAGGCTTTGGTCCTGGCACCCACTAGGGAACTTGCACAACAGATTGAGAAGGTTATGCGAGCCCTTGGTGATTATCTTGGTGTGAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTACGTGAAGACCAACGTATTCTTCAAGCTGGTGTTCATGTAGTTGTTGGTACACCTGGTCGTGTGTTTGATATGTTACGTAGACAGTCACTTCGTCCCGACTACATTCGGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGTGGATTTAAGGATCAGATTTATGATATTTTCCAGCTGCTACCATCCAAGATTCAGGTTGGGGTCTTCTCTGCTACAATGCCTCCTGAAGCCCTTGAGATCACCAGGAAGTTCATGAACAAGCCCGTTAGAATTCTTGTAAAGCGTGATGAGCTGACTTTGGAAGGTATCAAGCAGTTCTATGTTAATGTTGACAAGGAAGACTGGAAGCTTGAGACTCTCTGTGATCTTTATGAGACTTTGGCCATCACCCAGAGTGTTATCTTCGTCAATACTCGACGTAAAGTTGATTGGCTCACTGATAAGATGCGGAGCCGTGACCACACTGTGTCTGCTACCCATGGTGACATGGACCAGAACACCCGAGACATTATTATGCGTGAGTTCCGTTCAGGTTCTTCAAGGGTTCTGATTACCACTGATCTATTGGCTCGTGGTATCGATGTCCAGCAGGTTTCTCTCGTTATTAACTATGATCTGCCGACACAACCGGAGAACTACCTTCATCGTATAGGAAGAAGTGGACGTTTTGGAAGAAAAGGTGTTGCGATCAACTTTGTAACGACAGAGGACGAAAGAATGCTATTCGACATTCAGAAGTTCTACAATGTGGTAATTGAAGAGCTGCCAGCCAATGTTGCTGATCTGCTGTGA

Protein sequence

MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVSTASQGSKEKSRVPKAKAIVAAISNNQSSAPAKLNASADTAGDDTPNNSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKVKKDNSLAVKTPTPKQKDVRQRISQYTTGAVMPSGETVEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL

Homology

[Close]

BLAST of Lsi07G005920 vs. ExPASy Swiss-Prot
Match: P41381 (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 1.7e-229
Identity = 393/413 (95.16%), Postives = 411/413 (99.52%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MA LAP+G+QFDARQYD+KMN+LL+ADG+DFFTSYDEVYDSFD+MGLQENLLRGIYAYGF
Sbjct: 1   MARLAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL AGVHV+VGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 508
           DY+RMFVLDEADEMLSRGFKDQIYDIFQ+LP+K+QVGVFSATMPPEAL+ITRKFMNKPVR
Sbjct: 181 DYLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNKPVR 240

Query: 509 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 568
           ILVKRDELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 628
           +RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 TRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

Query: 629 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           ENYLHRIGRSGRFGRKGVAINFVTT+DERMLFDIQKFYNV+IEELP+NVADLL
Sbjct: 361 ENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNVIIEELPSNVADLL 413

[Close]

BLAST of Lsi07G005920 vs. ExPASy Swiss-Prot
Match: Q40467 (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 786.2 bits (2029), Expect = 3.0e-226
Identity = 391/413 (94.67%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFDARQYD KM ELL  + ++FFTSYDEVYDSFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 508
           D+I+MFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPVR
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVR 240

Query: 509 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 568
           ILVKRD++TLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
Sbjct: 241 ILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 628
           SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

Query: 629 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           ENYLHRIGRSGRFGRKGVAINFVT +DERMLFDIQKFYNVVIEELPANVADLL
Sbjct: 361 ENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413

[Close]

BLAST of Lsi07G005920 vs. ExPASy Swiss-Prot
Match: Q40468 (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 5.1e-226
Identity = 394/413 (95.40%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAG APEGSQFDARQ+DTKMNELLSADGQDFFTSYDEVYDSFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL Y L++CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLAYELLECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKV ACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVTACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 508
           D+I+MFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFMNKPVR
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 509 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 568
           ILVKRDELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 628
           SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQP
Sbjct: 301 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQP 360

Query: 629 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           ENYLHRIGRSGRFGRKGVAINFVT +DERML DIQ+FYNVVIEELPANVADLL
Sbjct: 361 ENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQRFYNVVIEELPANVADLL 413

[Close]

BLAST of Lsi07G005920 vs. ExPASy Swiss-Prot
Match: P41382 (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 785.0 bits (2026), Expect = 6.7e-226
Identity = 391/413 (94.67%), Postives = 404/413 (97.82%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFDARQYD KM ELL  + ++FFTSYDEVYDSFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 508
           D+I+MFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFMNKPVR
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 509 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 568
           ILVKRD++TLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
Sbjct: 241 ILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 628
           SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

Query: 629 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           ENYLHRIGRSGRFGRKGVAINFVT +DERML DIQKFYNVVIEELPANVADLL
Sbjct: 361 ENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQKFYNVVIEELPANVADLL 413

[Close]

BLAST of Lsi07G005920 vs. ExPASy Swiss-Prot
Match: Q40465 (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 1.1e-225
Identity = 392/413 (94.92%), Postives = 402/413 (97.34%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFDARQYD KM ELL  + Q+FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 508
           D I+MFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFMNKPVR
Sbjct: 181 DNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 509 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 568
           ILVKRDELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 628
            RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

Query: 629 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           ENYLHRIG SGRFGRKGV+INFVT +DERMLFDIQKFYNVVIEELPANVADLL
Sbjct: 361 ENYLHRIGHSGRFGRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANVADLL 413

[Close]

BLAST of Lsi07G005920 vs. ExPASy TrEMBL
Match: M4DHR0 (MYB transcription factor OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1)

HSP 1 Score: 960.3 bits (2481), Expect = 4.3e-276
Identity = 512/727 (70.43%), Postives = 582/727 (80.06%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  LT+RSNIDLKDKWRNL V+ 
Sbjct: 1   MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFAHQLTNRSNIDLKDKWRNLCVAP 60

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
            +Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 61  GTQCSNDKSRTRKVKEEGVTLASLSPTAATATPPSYPNSSSSSPATSLPRSASSDFSVDN 120

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 121 NFAVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 180

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKT---PTPKQKDVRQRISQ-YTTGAVMPSGET 240
           +QGKL KV N       YK+   +    +T   PTPK K+   +  Q Y       S E 
Sbjct: 181 AQGKLSKVSNSKPLLNFYKLPDGSETTTRTTPAPTPKPKETNVKPRQSYINQPPSVSQEM 240

Query: 241 VEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQI----------IKEMY 300
           +++AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++          +  +Y
Sbjct: 241 IDEAAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELSWRGCGLGLSLWGLY 300

Query: 301 EK----------YMAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMG 360
            +           MAG+A EG+Q+D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M 
Sbjct: 301 RRAQQCVYIHPLVMAGMASEGTQYDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTME 360

Query: 361 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 420
           L+ +LLRGIYAYGFEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L
Sbjct: 361 LRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTL 420

Query: 421 VQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTP 480
           +QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ GVHVVVGTP
Sbjct: 421 LQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQYGVHVVVGTP 480

Query: 481 GRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPE 540
           GRVFDMLRRQSLR D I+MFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFSATMPPE
Sbjct: 481 GRVFDMLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPE 540

Query: 541 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFV 600
           ALEITRKFM+KPVRILVKRDELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFV
Sbjct: 541 ALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFV 600

Query: 601 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 660
           NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ
Sbjct: 601 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 660

Query: 661 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELP 682
           QVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF+TT+DERM+ DIQKFYNVV+EELP
Sbjct: 661 QVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTTDDERMMSDIQKFYNVVVEELP 720

[Close]

BLAST of Lsi07G005920 vs. ExPASy TrEMBL
Match: A0A6D2JQ16 (MYB transcription factor OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS30283 PE=3 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 4.6e-270
Identity = 509/731 (69.63%), Postives = 574/731 (78.52%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT+EEE+ALLAG+ KHGPGKWKNIL+DP+F+  L +RSNIDLKDKWRNLSV+ 
Sbjct: 1   MGNQKLKWTAEEEEALLAGIKKHGPGKWKNILRDPEFSDQLINRSNIDLKDKWRNLSVAP 60

Query: 61  ASQGSKEKSRVPKAK--------AIVAAISN-NQSSAP---AKLNASADTAGDDTPNNST 120
             Q SK+K R  K K        AI    SN N SS P       A +D   DD   N+ 
Sbjct: 61  GIQVSKDKPRPVKVKGEGVTQDTAITTPPSNPNPSSKPPPSLPRTAPSDLTSDD-GYNTV 120

Query: 121 QDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQG 180
            D KN PRY  MIFEAL  + D++G DI +I  FIE RH VPQNFRR L+S+LRRL SQ 
Sbjct: 121 ADSKNAPRYDGMIFEALFALADADGSDISSIYTFIESRHHVPQNFRRILTSRLRRLASQE 180

Query: 181 KLEKV------QNCYKVKK--DNSLAVKTPTPKQKDVRQRISQYTTGAVMPSGETVEDAA 240
           KL K+      QN YK+ +  +  +    P    K+   +  Q    A   S   +E+AA
Sbjct: 181 KLVKISILKPLQNFYKIPEGAETRIPPIIPPKPAKETNTKPRQSNNQASAISNVMIEEAA 240

Query: 241 KAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYE-------------- 300
             AAYK+ +AENK  ++  AV+E  ++ K+A+ ++ +L++ KEM+E              
Sbjct: 241 ITAAYKLVEAENKIGVSKAAVEELVKMNKLADLSEHLLKLAKEMHEHCSRDPRSFALCLL 300

Query: 301 ---------------KYMAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSF 360
                            MAG+A EG+Q+D RQ+D+KMN +L  +G++ F+T  DEV DSF
Sbjct: 301 LNLSFSFSLVNLLTTSVMAGMAAEGTQYDPRQFDSKMNAILGEEGEETFYTISDEVCDSF 360

Query: 361 DSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 420
           D+M L+ +LLRGIYAYGFEKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSG+LQQL
Sbjct: 361 DAMELKSDLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGVLQQL 420

Query: 421 DYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVV 480
           DY LVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ GVHVV
Sbjct: 421 DYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQTGVHVV 480

Query: 481 VGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSAT 540
           VGTPGRVFDMLRRQSLR D I+MFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFSAT
Sbjct: 481 VGTPGRVFDMLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSAT 540

Query: 541 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQS 600
           MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQS
Sbjct: 541 MPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQS 600

Query: 601 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 660
           VIFVNTRRKVDWLTD+MRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG
Sbjct: 601 VIFVNTRRKVDWLTDRMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 660

Query: 661 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVI 682
           IDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF+TT+DERML DIQKFYNVV+
Sbjct: 661 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFLTTDDERMLSDIQKFYNVVV 720

[Close]

BLAST of Lsi07G005920 vs. ExPASy TrEMBL
Match: A0A6D2HRH4 (MYB transcription factor OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS5678 PE=3 SV=1)

HSP 1 Score: 911.8 bits (2355), Expect = 1.8e-261
Identity = 492/701 (70.19%), Postives = 559/701 (79.74%), Query Frame = 0


Query: 2   GNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVSTA 61
           G +  KWT+EEE ALLAG+ KHG GKW +I+ DP  +  L  R+NI LKDKWRN  +   
Sbjct: 3   GRRNNKWTAEEESALLAGIAKHGVGKWSDIVDDPLLSAQLAGRNNIQLKDKWRN--IQKR 62

Query: 62  SQGSKEKSRVPKAKAIVAAISNNQSSAPAKLNASADTAGDDTPNNSTQDGKNVPRYYSMI 121
            +  +EKS   K +AI +A   N S+       S   + + +PN S  D  N  RY++M+
Sbjct: 63  GRLVEEKS---KTQAIKSASIPNSSA-----KTSPVVSNEPSPNRSL-DMSNESRYHAMV 122

Query: 122 FEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKVKK 181
           FEA+STI D NG D+  I++FIE+R+EVPQNF + LS  LR LVSQG LEKV N YK+  
Sbjct: 123 FEAISTIDDENGSDLIGILSFIEERYEVPQNFTKLLSKSLRALVSQGNLEKVLNRYKI-- 182

Query: 182 DNSLAVKTPTPKQKDVRQRISQYTTGAVMPSGETVEDAAKAAAYKVADAENKSFLAAEAV 241
                                     +VM   + +E +    A ++A AE K+F+AAEAV
Sbjct: 183 --------------------------SVMEC-KVLEISPDVVAKRIAVAEKKAFIAAEAV 242

Query: 242 KEAERIAKMAEDTDSMLQIIKEMYEK--------------------YMAGLAPEGSQFDA 301
           KEAER+ ++AE+++  LQ++ +++E+                     MAG APEGSQFD 
Sbjct: 243 KEAERMQQLAEESELTLQLVLDIHEQCALGKRVFLRSYLSPSTQSPVMAGSAPEGSQFDT 302

Query: 302 RQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIV 361
           RQ+D K+NE+L  +GQD FFTSYDEV++SFD+MGLQENLLRGIYAYGFEKPSAIQQRGIV
Sbjct: 303 RQFDQKLNEVL--EGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 362

Query: 362 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALG 421
           PFC GLDVIQQAQSGTGKTATFCSG+LQQLD+ LVQCQALVLAPTRELAQQIEKVMRALG
Sbjct: 363 PFCNGLDVIQQAQSGTGKTATFCSGVLQQLDFTLVQCQALVLAPTRELAQQIEKVMRALG 422

Query: 422 DYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEAD 481
           DYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD I+MFVLDEAD
Sbjct: 423 DYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEAD 482

Query: 482 EMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEG 541
           EMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPVRILVKRDELTLEG
Sbjct: 483 EMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEG 542

Query: 542 IKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGD 601
           IKQFYVNV+KE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLT+KMR RDHTVSATHGD
Sbjct: 543 IKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTEKMRGRDHTVSATHGD 602

Query: 602 MDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGR 661
           MDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGR
Sbjct: 603 MDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGR 661

Query: 662 FGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           FGRKGVAINFVT++DERML DIQ+FYNV +EELP+NVADLL
Sbjct: 663 FGRKGVAINFVTSDDERMLSDIQRFYNVTVEELPSNVADLL 661

[Close]

BLAST of Lsi07G005920 vs. ExPASy TrEMBL
Match: E5GB87 (Helicase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 820.8 bits (2119), Expect = 4.1e-234
Identity = 412/413 (99.76%), Postives = 413/413 (100.00%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 508
           DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR
Sbjct: 181 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 509 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 568
           ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 628
           SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

Query: 629 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNV+IEELPANVADLL
Sbjct: 361 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVIIEELPANVADLL 413

[Close]

BLAST of Lsi07G005920 vs. ExPASy TrEMBL
Match: A0A1S3BIH8 (eukaryotic initiation factor 4A-8 OS=Cucumis melo OX=3656 GN=LOC103490034 PE=3 SV=1)

HSP 1 Score: 820.8 bits (2119), Expect = 4.1e-234
Identity = 412/413 (99.76%), Postives = 413/413 (100.00%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 328
           MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGF 60

Query: 329 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 388
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120

Query: 389 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 448
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 449 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 508
           DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR
Sbjct: 181 DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 509 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 568
           ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

Query: 569 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 628
           SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
Sbjct: 301 SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP 360

Query: 629 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNV+IEELPANVADLL
Sbjct: 361 ENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVIIEELPANVADLL 413

[Close]

BLAST of Lsi07G005920 vs. NCBI nr
Match: KGN59924.2 (hypothetical protein Csa_001589 [Cucumis sativus])

HSP 1 Score: 1308.5 bits (3385), Expect = 0.0e+00
Identity = 673/683 (98.54%), Postives = 676/683 (98.98%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST
Sbjct: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60

Query: 61  ASQGSKEKSR-VPKAKAIVAAISNNQSSAPAKLNASADTAGDDTPNNSTQDGKNVPRYYS 120
           ASQGSKEKSR  PKAKAIVAAISNNQ+SAPAK NASAD AGDDTPNNSTQDGKNVPRYYS
Sbjct: 61  ASQGSKEKSRAAPKAKAIVAAISNNQTSAPAKPNASADAAGDDTPNNSTQDGKNVPRYYS 120

Query: 121 MIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKV 180
           MIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCY+V
Sbjct: 121 MIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYRV 180

Query: 181 KKDNSLAVKTPTPKQKDVRQRISQY-TTGAVMPSGETVEDAAKAAAYKVADAENKSFLAA 240
           KKDNSLAVKTPTPKQKDVRQRISQY TTG VMPS ETVEDAAKAAAYKVADAENKSFLAA
Sbjct: 181 KKDNSLAVKTPTPKQKDVRQRISQYNTTGGVMPSAETVEDAAKAAAYKVADAENKSFLAA 240

Query: 241 EAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYDTKMNELLSADGQD 300
           EAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYD+KMNELLSADGQD
Sbjct: 241 EAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYDSKMNELLSADGQD 300

Query: 301 FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGK 360
           FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGK
Sbjct: 301 FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGK 360

Query: 361 TATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 420
           TATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE
Sbjct: 361 TATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRE 420

Query: 421 DQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLL 480
           DQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLL
Sbjct: 421 DQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLL 480

Query: 481 PSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETL 540
           PSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETL
Sbjct: 481 PSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETL 540

Query: 541 CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 600
           CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS
Sbjct: 541 CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 600

Query: 601 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERM 660
           RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERM
Sbjct: 601 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERM 660

Query: 661 LFDIQKFYNVVIEELPANVADLL 682
           LFDIQKFYNVVIEELPANVADLL
Sbjct: 661 LFDIQKFYNVVIEELPANVADLL 683

[Close]

BLAST of Lsi07G005920 vs. NCBI nr
Match: CAF2197740.1 (unnamed protein product, partial [Brassica napus])

HSP 1 Score: 983.8 bits (2542), Expect = 7.5e-283
Identity = 515/707 (72.84%), Postives = 586/707 (82.89%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  LT+RSNIDLKDKWRNL V+ 
Sbjct: 20  MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFAHQLTNRSNIDLKDKWRNLCVAP 79

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
            +Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 80  GTQCSNDKSRTRKVKEEGVTLASLSPTAATATPPSYPNSSSSSPATSLPRSASSDFSVDN 139

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 140 NFAVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 199

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKT---PTPKQKDVRQRISQ-YTTGAVMPSGET 240
           +QGKL KV N       YK+   +    +T   PTPK K+   +  Q Y       S E 
Sbjct: 200 AQGKLSKVSNSKPLLNFYKLPDGSETTTRTTPAPTPKPKETNVKPRQSYINQPPSVSQEM 259

Query: 241 VEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPE 300
           +++AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++ KEM++++MAG+A E
Sbjct: 260 IDEAAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELAKEMHKEFMAGMASE 319

Query: 301 GSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAI 360
           G+Q+D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M L+ +LLRGIYAYGFEKPSAI
Sbjct: 320 GTQYDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTMELRSDLLRGIYAYGFEKPSAI 379

Query: 361 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEK 420
           QQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEK
Sbjct: 380 QQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLLQCQALVLAPTRELAQQIEK 439

Query: 421 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMF 480
           VMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLR D I+MF
Sbjct: 440 VMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRADAIKMF 499

Query: 481 VLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 540
           VLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFSATMPPEALEITRKFM+KPVRILVKRD
Sbjct: 500 VLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMSKPVRILVKRD 559

Query: 541 ELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 600
           ELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV
Sbjct: 560 ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 619

Query: 601 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHR 660
           SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHR
Sbjct: 620 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHR 679

Query: 661 IGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           IGRSGRFGRKGVAINF+TT+DERML DIQKFYNVV+EELP NVADLL
Sbjct: 680 IGRSGRFGRKGVAINFMTTDDERMLSDIQKFYNVVVEELPNNVADLL 726

[Close]

BLAST of Lsi07G005920 vs. NCBI nr
Match: KAG2254048.1 (hypothetical protein Bca52824_084184 [Brassica carinata])

HSP 1 Score: 983.4 bits (2541), Expect = 9.8e-283
Identity = 515/707 (72.84%), Postives = 586/707 (82.89%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  L++RSNIDLKDKWRNL V+ 
Sbjct: 1   MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFADQLSNRSNIDLKDKWRNLCVAP 60

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
           A+Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 61  ATQCSNDKSRTRKVKEEGVTLASLSPTAAAATPPPYANSSSSSPATSLPRSASSDFSVDN 120

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 121 NFVVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 180

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKT---PTPKQKDVRQRISQ-YTTGAVMPSGET 240
           +QGKL KV N       YK+   +    +T   PTPK  +   +  Q Y       S E 
Sbjct: 181 AQGKLSKVSNSKPLLNFYKLPDGSETTTRTTPAPTPKPMETNVKPRQSYINQPPSVSQEM 240

Query: 241 VEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPE 300
           +++AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++ KEM++++MAG+A E
Sbjct: 241 IDEAAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELAKEMHKQFMAGMASE 300

Query: 301 GSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAI 360
           G+Q+D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M L+ +LLRGIYAYGFEKPSAI
Sbjct: 301 GTQYDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTMELRSDLLRGIYAYGFEKPSAI 360

Query: 361 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEK 420
           QQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LVQCQALVLAPTRELAQQIEK
Sbjct: 361 QQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEK 420

Query: 421 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMF 480
           VMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLR D I+MF
Sbjct: 421 VMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRADAIKMF 480

Query: 481 VLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 540
           VLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFSATMPPEALEITRKFM+KPVRILVKRD
Sbjct: 481 VLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMSKPVRILVKRD 540

Query: 541 ELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 600
           ELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV
Sbjct: 541 ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 600

Query: 601 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHR 660
           SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHR
Sbjct: 601 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHR 660

Query: 661 IGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           IGRSGRFGRKGVAINF+TTEDERM+ DIQKFYNVV+EELP NVADLL
Sbjct: 661 IGRSGRFGRKGVAINFMTTEDERMMSDIQKFYNVVVEELPNNVADLL 707

[Close]

BLAST of Lsi07G005920 vs. NCBI nr
Match: CAG7904465.1 (unnamed protein product, partial [Brassica rapa])

HSP 1 Score: 982.2 bits (2538), Expect = 2.2e-282
Identity = 514/707 (72.70%), Postives = 586/707 (82.89%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  LT+RSNIDLKDKWRNL V+ 
Sbjct: 20  MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFAHQLTNRSNIDLKDKWRNLCVAP 79

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
            +Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 80  GTQCSNDKSRTRKVKEEGVTLASLSPTAATATPPSYPNSSSSSPATSLPRSASSDFSVDN 139

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 140 NFAVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 199

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKT---PTPKQKDVRQRISQ-YTTGAVMPSGET 240
           +QGKL KV N       YK+   +    +T   PTPK K+   +  Q Y       S E 
Sbjct: 200 AQGKLSKVSNSKPLLNFYKLPDGSETTTRTTPAPTPKPKETNIKPRQSYINQPPSVSQEM 259

Query: 241 VEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPE 300
           +++AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++ KEM++++MAG+A E
Sbjct: 260 IDEAAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELAKEMHKEFMAGMASE 319

Query: 301 GSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAI 360
           G+Q+D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M L+ +LLRGIYAYGFEKPSAI
Sbjct: 320 GTQYDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTMELRSDLLRGIYAYGFEKPSAI 379

Query: 361 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEK 420
           QQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEK
Sbjct: 380 QQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLLQCQALVLAPTRELAQQIEK 439

Query: 421 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMF 480
           VMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLR D I+MF
Sbjct: 440 VMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRADAIKMF 499

Query: 481 VLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 540
           VLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFSATMPPEALEITRKFM+KPVRILVKRD
Sbjct: 500 VLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMSKPVRILVKRD 559

Query: 541 ELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 600
           ELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV
Sbjct: 560 ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTV 619

Query: 601 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHR 660
           SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHR
Sbjct: 620 SATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHR 679

Query: 661 IGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           IGRSGRFGRKGVAINF+T+EDERM+ DIQKFYNVV+EELP NVADLL
Sbjct: 680 IGRSGRFGRKGVAINFMTSEDERMMSDIQKFYNVVVEELPNNVADLL 726

[Close]

BLAST of Lsi07G005920 vs. NCBI nr
Match: CAF2064460.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 979.9 bits (2532), Expect = 1.1e-281
Identity = 513/704 (72.87%), Postives = 584/704 (82.95%), Query Frame = 0


Query: 1   MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVST 60
           MGNQK KWT +EE+AL AG+ KHGPGKWKNIL+DP+FA  L++RSNIDLKDKWRNL V+ 
Sbjct: 1   MGNQKLKWTGDEEEALRAGIEKHGPGKWKNILRDPEFADQLSNRSNIDLKDKWRNLCVAP 60

Query: 61  ASQGSKEKSRVPKAK---AIVAAIS------------NNQSSAPAKLNASADTAGDDTPN 120
           A+Q S +KSR  K K     +A++S            N+ SS+PA     + ++     N
Sbjct: 61  ATQCSNDKSRTRKVKEEGVTLASLSPTAAAATPPPYANSSSSSPATSLPRSASSDFSVDN 120

Query: 121 NSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLV 180
           N   D KN PRY +MIFEA+S + D NG D+G+I +FIE RHEVP  FRR LSS+LRRL 
Sbjct: 121 NFVVDNKNAPRYDAMIFEAISELADPNGSDVGSIFSFIEPRHEVPPTFRRVLSSRLRRLA 180

Query: 181 SQGKLEKVQNC------YKVKKDNSLAVKTPTPKQKDVRQRISQ-YTTGAVMPSGETVED 240
           +QGKL KV N       YK+  D S     PTPK K+   +  Q Y       S E +++
Sbjct: 181 AQGKLSKVSNSKPLLNFYKL-PDGSETTPAPTPKPKETNIKPRQSYINQPPSVSQEMIDE 240

Query: 241 AAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQ 300
           AA  AA KV +AENK  +A  AV+E E+  K+A++T+ ML++ KEM++++MAG+A EG+Q
Sbjct: 241 AAITAACKVVEAENKINVAKAAVEELEKTTKLADETELMLELAKEMHKQFMAGMASEGTQ 300

Query: 301 FDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQR 360
           +D RQ+DTKMN +L  +GQ+ F+T+YDEV DSFD+M L+ +LLRGIYAYGFEKPSAIQQR
Sbjct: 301 YDPRQFDTKMNAILGEEGQETFYTTYDEVCDSFDTMELRSDLLRGIYAYGFEKPSAIQQR 360

Query: 361 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMR 420
           GI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRELAQQIEKVMR
Sbjct: 361 GIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLLQCQALVLAPTRELAQQIEKVMR 420

Query: 421 ALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLD 480
           ALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSL  D I+MFVLD
Sbjct: 421 ALGDYLGVKVHACVGGTSVREDQRILHSGVHVVVGTPGRVFDMLRRQSLPADAIKMFVLD 480

Query: 481 EADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 540
           EADEMLSRGFKDQIYDIFQLLPSK+QVGVFSATMPPEALEITRKFM+KPVRILVKRDELT
Sbjct: 481 EADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMSKPVRILVKRDELT 540

Query: 541 LEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT 600
           LEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT
Sbjct: 541 LEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT 600

Query: 601 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGR 660
           HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGR
Sbjct: 601 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGR 660

Query: 661 SGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           SGRFGRKGVAINF+TT+DERM+ DIQKFYNVV+EELP NVADLL
Sbjct: 661 SGRFGRKGVAINFMTTDDERMMSDIQKFYNVVVEELPNNVADLL 703

[Close]

BLAST of Lsi07G005920 vs. TAIR 10
Match: AT1G54270.1 (eif4a-2 )

HSP 1 Score: 767.7 bits (1981), Expect = 7.9e-222
Identity = 385/414 (93.00%), Postives = 403/414 (97.34%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG APEG+QFD RQ+D ++NE+L  DGQD FFTSYDEV++SFD+MGLQENLLRGIYAYG
Sbjct: 1   MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV 508
           PD I+MFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 181 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 509 RILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 568
           RILVKRDELTLEGIKQFYVNV+KEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 628
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

Query: 629 PENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           PENYLHRIGRSGRFGRKGVAINFVT +D+RMLFDIQKFYNVV+EELP+NVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412

[Close]

BLAST of Lsi07G005920 vs. TAIR 10
Match: AT3G13920.1 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 764.6 bits (1973), Expect = 6.7e-221
Identity = 383/414 (92.51%), Postives = 404/414 (97.58%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG APEG+QFDARQ+D K+NE+L  +GQD FFTSYD+V++SFD+MGLQENLLRGIYAYG
Sbjct: 1   MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV 508
            D I+MFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 181 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 509 RILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 568
           RILVKRDELTLEGIKQFYVNV+KE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 628
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

Query: 629 PENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           PENYLHRIGRSGRFGRKGVAINFVT +DERMLFDIQKFYNVV+EELP+NVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 412

[Close]

BLAST of Lsi07G005920 vs. TAIR 10
Match: AT1G54270.2 (eif4a-2 )

HSP 1 Score: 750.7 bits (1937), Expect = 1.0e-216
Identity = 380/414 (91.79%), Postives = 398/414 (96.14%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG APEG+QFD RQ+D ++NE+L  DGQD FFTSYDEV++SFD+MGLQENLLR     G
Sbjct: 1   MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLR-----G 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV 508
           PD I+MFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 181 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 509 RILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 568
           RILVKRDELTLEGIKQFYVNV+KEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 628
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

Query: 629 PENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           PENYLHRIGRSGRFGRKGVAINFVT +D+RMLFDIQKFYNVV+EELP+NVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 407

[Close]

BLAST of Lsi07G005920 vs. TAIR 10
Match: AT3G13920.4 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 747.7 bits (1929), Expect = 8.4e-216
Identity = 378/414 (91.30%), Postives = 399/414 (96.38%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG APEG+QFDARQ+D K+NE+L  +GQD FFTSYD+V++SFD+MGLQENLLR     G
Sbjct: 1   MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLR-----G 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV 508
            D I+MFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 181 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 509 RILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 568
           RILVKRDELTLEGIKQFYVNV+KE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 628
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

Query: 629 PENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           PENYLHRIGRSGRFGRKGVAINFVT +DERMLFDIQKFYNVV+EELP+NVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNVADLL 407

[Close]

BLAST of Lsi07G005920 vs. TAIR 10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 746.9 bits (1927), Expect = 1.4e-215
Identity = 370/414 (89.37%), Postives = 398/414 (96.14%), Query Frame = 0


Query: 269 MAGLAPEGSQFDARQYDTKMNELLSADGQD-FFTSYDEVYDSFDSMGLQENLLRGIYAYG 328
           MAG+A +G+Q+D RQ+DTKMN +L  +G++ F+T+YDEV DSFD+M LQ +LLRGIYAYG
Sbjct: 1   MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60

Query: 329 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 388
           FEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD  LVQCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120

Query: 389 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 448
           LAQQIEKVMRALGDYLGVK  ACVGGTSVREDQR+LQ+GVHVVVGTPGRVFD+LRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180

Query: 449 PDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV 508
            D I+MFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFSATMPPEALEITRKFMNKPV
Sbjct: 181 ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV 240

Query: 509 RILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 568
           RILVKRDELTLEGIKQFYVNVDKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

Query: 569 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 628
           RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360

Query: 629 PENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 682
           PENYLHRIGRSGRFGRKGVAINF+T+EDERM+ DIQ+FYNVV+EELP+NVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL 414

The following BLAST results are available for this feature:

BLAST of Lsi07G005920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41381	1.7e-229	95.16	Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40467	3.0e-226	94.67	Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40468	5.1e-226	95.40	Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P41382	6.7e-226	94.67	Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40465	1.1e-225	94.92	Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Lsi07G005920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M4DHR0	4.3e-276	70.43	MYB transcription factor OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1	[more]
A0A6D2JQ16	4.6e-270	69.63	MYB transcription factor OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS30283...	[more]
A0A6D2HRH4	1.8e-261	70.19	MYB transcription factor OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS5678 ...	[more]
E5GB87	4.1e-234	99.76	Helicase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3BIH8	4.1e-234	99.76	eukaryotic initiation factor 4A-8 OS=Cucumis melo OX=3656 GN=LOC103490034 PE=3 S...	[more]

BLAST of Lsi07G005920 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59924.2	0.0e+00	98.54	hypothetical protein Csa_001589 [Cucumis sativus]	[more]
CAF2197740.1	7.5e-283	72.84	unnamed protein product, partial [Brassica napus]	[more]
KAG2254048.1	9.8e-283	72.84	hypothetical protein Bca52824_084184 [Brassica carinata]	[more]
CAG7904465.1	2.2e-282	72.70	unnamed protein product, partial [Brassica rapa]	[more]
CAF2064460.1	1.1e-281	72.87	unnamed protein product [Brassica napus]	[more]

BLAST of Lsi07G005920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54270.1	7.9e-222	93.00	eif4a-2	[more]
AT3G13920.1	6.7e-221	92.51	eukaryotic translation initiation factor 4A1	[more]
AT1G54270.2	1.0e-216	91.79	eif4a-2	[more]
AT3G13920.4	8.4e-216	91.30	eukaryotic translation initiation factor 4A1	[more]
AT1G72730.1	1.4e-215	89.37	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 4..59 e-value: 2.7E-8 score: 43.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..57 score: 8.466847
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 111..176 e-value: 5.4E-14 score: 62.5
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 115..174 e-value: 8.2E-10 score: 38.9
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 113..181 score: 24.37525
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 327..524 e-value: 2.8E-56 score: 203.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 339..509 score: 28.849428
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 561..642 e-value: 1.5E-31 score: 120.8
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 534..642 e-value: 1.6E-28 score: 99.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 520..681 score: 25.885315
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 5..56 e-value: 2.1E-9 score: 37.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..61 score: 14.374061
None	No IPR available	GENE3D	1.10.246.220		coord: 8..86 e-value: 4.2E-20 score: 73.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..113
None	No IPR available	PANTHER	PTHR24031:SF735	EUKARYOTIC INITIATION FACTOR 4A-2	coord: 291..681
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 291..681
None	No IPR available	CDD	cd11660	SANT_TRF	coord: 6..56 e-value: 1.49506E-21 score: 86.0819
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 521..651 e-value: 7.0406E-60 score: 195.033
None	No IPR available	CDD	cd17939	DEADc_EIF4A	coord: 313..510 e-value: 4.9072E-134 score: 390.532
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 333..494 e-value: 1.1E-39 score: 136.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 298..516 e-value: 1.7E-66 score: 225.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 517..681 e-value: 1.2E-57 score: 195.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 377..662
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 110..197 e-value: 3.0E-12 score: 48.5
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 455..463
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 308..336 score: 10.696912
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..58
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 110..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G005920.1	Lsi07G005920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002183	cytoplasmic translational initiation
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding