Lsi07G005310 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G005310
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Profilin
Location	chr07: 5651707 .. 5653751 (-)
RNA-Seq Expression	Lsi07G005310
Synteny	Lsi07G005310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGAGCGAAGAAACCATAACCAAAACAAAGAAGGGAAATTACAGAGGGAATTCTTTGATTCATTAACTCGGAGAAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATTATCGGTAACGACGGTTCTATTTGGGCTCAGAGCAACGGTTTCCCTCAGGTTTTTCTCTTTTTTCTGATCAAATGGCGTATTTCTGATTTTCTTCCTTTCTTTTTCGGATGATTTTATGCTATTCTTGTTTTCTTTTCTTTTACCTCTTAGTTGTTGTCGACGTCATGATCAAATAGGCTCCACCATTTCCTGTTTCGGATATAATGAGCGATGCGTTTCCTGAAAAATCGAGTATCTACGTTGCTTGTTATTATTATTTTGTTGAGATCTGAGAATTATGAACTTTCATTTTTTTTAACATTTTCCGATTGCTTCGTTGAGCTGATTGTAGATTGTTTCTATTGTTTTGTTATGGTATATTGACACGAGCATGAGCGTGGATCGGGAAATGGATTGATTGCTAAGAAAATGTCTGTAAACAGGAATTTGAGGGATTCTGTTGCCAATACATTTATATTGGCGATTGGAAACTTTGTATCGGCGATTGTTAATTATTCTTGTTGTTTTAAGCACATTTTTCAGTGCAATTCTGTTGGCTGATGGTATGAATAAGTGTTTGTCTTCTTTTGTTATTTTTTAGTACAAGCCAGAAGAGATTTCTGCCATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCCCCGACTGGGTTGCACCTTGGTGGATCAAAGTACATGGTTATCCAGGGGGAATCTGGTGCTGTTATCCGTGGAAAGAAGGTACGTTTTGATACTAGTGATGATAATCGACCATCAATGTTGTTCATTCTATTTTATGGCTACCCCAATGCAGATTATATATAGACTTGACCATCAGGATTGATTATTCTATGAATATAAAGAATATTGAATGCATATTATGATCCTTAGGCTCTTTTTTCCTTTTAAAAAAGACGTTGAATAAAAATGGTTAAATCCATTTGATTTTGCTACCATAACTAAGGCGATGGTTGGGAGTGATTCCAAAATTATTAAAATCGGTATTTTTGTCATTTTTAAAATCATTATGAATAATTATGAATCATGTTTTTAATGATTCAAAACCAATTTTGATGAAATGAAAATTGCATTAATTTCGGGTGATTAAAGCAGTGTTTCGGAGTGATTAATTTCAAAATCACTCCCAAATATACACTAATGGGTTGCTCTCTAGGAATCAAATCTAAAGAAATTCTACATTTTTCTTATTGAATTATTAAACCCACTATCCAGGAAATTTCCACCATTCATGGTTGGTATCATTTTTCAACCATGGGAAATTTCCAATTATCATTCAATCTTATATATTGTGGACTTTGCATCAGGCAATGAAATTCAGCTCCTAAGAGTTGCAGTACATATTTGATATGATGGTTCTTCAAAATTGGTTTTTATTCCATCCACTTGACAGGGCACTTCTGGGATCACTGTAAAGAAAACAAACCAAGCACTGATTTTTGGTTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCATGTAATTGTTCATCTCAATTTCTCACATCGTCTTCTATTCTATACATAATTGGGATTTTGAGCTGGTGTCCTGCTTTTATGGCTGTGAACTGAGTTGTTAGAGAAAATAACAGTGTGAAGAATCAGGATAAAGAGCAAGAGTGTGGTGATTTTGGTCGCTGATTTCTACCCATTCTATGTATTTTTGGCTTCTTTTTTTTTTCCCCTCCTTCTTTTTGTGTATTTATGAATACACTACTTCAAATATGAGTTTTTGAAAGCATTACACGTATGAGATTGTACTTATATTATTGTTATTTTGGTTTTTAATATAACTATGGAAAAGTTGTGATCATTCCATTGTAGTTGAGTAACGAGTACTATTCAT

mRNA sequence

GTGAGAGCGAAGAAACCATAACCAAAACAAAGAAGGGAAATTACAGAGGGAATTCTTTGATTCATTAACTCGGAGAAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATTATCGGTAACGACGGTTCTATTTGGGCTCAGAGCAACGGTTTCCCTCAGTACAAGCCAGAAGAGATTTCTGCCATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCCCCGACTGGGTTGCACCTTGGTGGATCAAAGTACATGGTTATCCAGGGGGAATCTGGTGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAAACCAAGCACTGATTTTTGGTTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCATGTAATTGTTCATCTCAATTTCTCACATCGTCTTCTATTCTATACATAATTGGGATTTTGAGCTGGTGTCCTGCTTTTATGGCTGTGAACTGAGTTGTTAGAGAAAATAACAGTGTGAAGAATCAGGATAAAGAGCAAGAGTGTGGTGATTTTGGTCGCTGATTTCTACCCATTCTATGTATTTTTGGCTTCTTTTTTTTTTCCCCTCCTTCTTTTTGTGTATTTATGAATACACTACTTCAAATATGAGTTTTTGAAAGCATTACACGTATGAGATTGTACTTATATTATTGTTATTTTGGTTTTTAATATAACTATGGAAAAGTTGTGATCATTCCATTGTAGTTGAGTAACGAGTACTATTCAT

Coding sequence (CDS)

ATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATTATCGGTAACGACGGTTCTATTTGGGCTCAGAGCAACGGTTTCCCTCAGTACAAGCCAGAAGAGATTTCTGCCATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCCCCGACTGGGTTGCACCTTGGTGGATCAAAGTACATGGTTATCCAGGGGGAATCTGGTGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAAACCAAGCACTGATTTTTGGTTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCATGTAA

Protein sequence

MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSLAPTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGM

Homology

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BLAST of Lsi07G005310 vs. ExPASy Swiss-Prot
Match: Q941H7 (Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.9e-61
Identity = 107/131 (81.68%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQ+Y+DD LM E DGQHL AAAIIG+DGS+WAQS  FPQ+KP EI+AIMKDFDEPGSL
Sbjct: 1   MSWQTYVDDHLMCETDGQHLTAAAIIGHDGSVWAQSANFPQFKPAEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGE GAVIRGKKG  GITVKKT QALI G+YDEPMTPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGPGGITVKKTTQALIIGIYDEPMTPGQCNMVVE 120

Query: 121 KLGDYLIDQGM 132
           +LGDYL+DQG+
Sbjct: 121 RLGDYLVDQGL 131

[Close]

BLAST of Lsi07G005310 vs. ExPASy Swiss-Prot
Match: Q9XF38 (Profilin OS=Pyrus communis OX=23211 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 3.8e-61
Identity = 103/131 (78.63%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQ+Y+DD LM ++DG HL AAAI+G+DGS+WAQS+ FP++KPEEI+AIMKDFDEPGSL
Sbjct: 1   MSWQAYVDDHLMCDIDGHHLTAAAILGHDGSVWAQSSTFPKFKPEEITAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGE GAVIRGKKG+ G+TVKKT+QAL+FG+Y+EP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTSQALVFGIYEEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           +LGDYLIDQG+
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Lsi07G005310 vs. ExPASy Swiss-Prot
Match: A4KA41 (Profilin-5 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.0e-61
Identity = 106/131 (80.92%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQ+Y+D+ LM E+DG HL AAAIIG+DGS+WAQS+ FPQ+KPEEI+AI+KDFDEPGSL
Sbjct: 1   MSWQAYVDEHLMCEIDGHHLSAAAIIGHDGSVWAQSSTFPQFKPEEIAAIIKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG KYMVIQGESGAVIRGKKG  GITVKKT+QALIFG+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGIKYMVIQGESGAVIRGKKGAGGITVKKTSQALIFGIYDEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           +LGDYL+ QG+
Sbjct: 121 RLGDYLLKQGL 131

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BLAST of Lsi07G005310 vs. ExPASy Swiss-Prot
Match: Q9M7N0 (Profilin-3 OS=Hevea brasiliensis OX=3981 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 6.5e-61
Identity = 104/131 (79.39%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQ+Y+D+ LM ++DG HL AAAIIG+DGS+WAQS+ FPQ+KPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQTYVDEHLMCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGE GAVIRGKKG+ GITVKKT QALI G+YDEP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           +LGDYL++QGM
Sbjct: 121 RLGDYLLEQGM 131

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BLAST of Lsi07G005310 vs. ExPASy Swiss-Prot
Match: Q9XF40 (Profilin-1 OS=Malus domestica OX=3750 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.4e-60
Identity = 102/131 (77.86%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQ+Y+DD+LM ++DG HL AAAI+G+DGS+WA S+ FP++KPEEI+AIMKDFDEPGSL
Sbjct: 1   MSWQAYVDDRLMCDIDGHHLTAAAILGHDGSVWAHSSTFPKFKPEEITAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGE GAVIRGKKG+ G+TVKKT QAL+FG+Y+EP+TPGQCNMIVE
Sbjct: 61  APTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTGQALVFGIYEEPLTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           +LGDYLIDQG+
Sbjct: 121 RLGDYLIDQGL 131

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BLAST of Lsi07G005310 vs. ExPASy TrEMBL
Match: A0A1S3BHQ2 (Profilin OS=Cucumis melo OX=3656 GN=LOC103489979 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.3e-68
Identity = 126/131 (96.18%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGS+WAQS+GFPQYKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSGFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Lsi07G005310 vs. ExPASy TrEMBL
Match: A0A6J1ITQ4 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111479863 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDGS+WAQS+ FPQYKPEEISAIMKDFDEPG+L
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSEFPQYKPEEISAIMKDFDEPGTL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL GSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQGM
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Lsi07G005310 vs. ExPASy TrEMBL
Match: A0A0A0LBL9 (Profilin OS=Cucumis sativus OX=3659 GN=Csa_3G435030 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGS+WAQS+ FPQYKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSAFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Lsi07G005310 vs. ExPASy TrEMBL
Match: A0A6J1GUQ5 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111457625 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDGS+WA+S+ FPQYKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAKSSEFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL GSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQGM
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Lsi07G005310 vs. ExPASy TrEMBL
Match: A0A6J1DH42 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021021 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.6e-65
Identity = 119/131 (90.84%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDG++WAQS  FP++KPEE++AIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGTVWAQSADFPKFKPEEVNAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGG+KYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLGGAKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Lsi07G005310 vs. NCBI nr
Match: XP_038880043.1 (profilin-like [Benincasa hispida])

HSP 1 Score: 271.9 bits (694), Expect = 2.8e-69
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDGS+WAQS+GFPQYKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSGFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQGM
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Lsi07G005310 vs. NCBI nr
Match: XP_008447563.1 (PREDICTED: profilin-like [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 6.9e-68
Identity = 126/131 (96.18%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGS+WAQS+GFPQYKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSGFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Lsi07G005310 vs. NCBI nr
Match: XP_022980486.1 (profilin-like [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDGS+WAQS+ FPQYKPEEISAIMKDFDEPG+L
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSEFPQYKPEEISAIMKDFDEPGTL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL GSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQGM
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Lsi07G005310 vs. NCBI nr
Match: XP_022955703.1 (profilin-like [Cucurbita moschata] >KAG6581872.1 hypothetical protein SDJN03_21874, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018309.1 hypothetical protein SDJN02_20177 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.0 bits (676), Expect = 3.4e-67
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAI+GNDGS+WA+S+ FPQYKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAKSSEFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHL GSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE
Sbjct: 61  APTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQGM
Sbjct: 121 KLGDYLIDQGM 131

[Close]

BLAST of Lsi07G005310 vs. NCBI nr
Match: XP_004149180.1 (profilin [Cucumis sativus] >KGN58022.1 hypothetical protein Csa_009746 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 3.4e-67
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGS+WAQS+ FPQYKPEEISAIMKDFDEPGSL
Sbjct: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSVWAQSSAFPQYKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKT QALIFGLYDEPMTPGQCN+IVE
Sbjct: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTTQALIFGLYDEPMTPGQCNVIVE 120

Query: 121 KLGDYLIDQGM 132
           KLGDYLIDQG+
Sbjct: 121 KLGDYLIDQGL 131

[Close]

BLAST of Lsi07G005310 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 211.8 bits (538), Expect = 3.2e-55
Identity = 95/128 (74.22%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSY+DD LM +V+G HL AAAI+G DGS+WAQS  FPQ KP+EI  I KDF+EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGL LGG KYMVIQGE GAVIRGKKG  G+T+KKTNQAL+FG YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 KLGDYLID 129
           +LGDYLI+
Sbjct: 121 RLGDYLIE 128

[Close]

BLAST of Lsi07G005310 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-54
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQSY+DD LM EV+G HL  AAI G DGS+WAQS+ FPQ KP EI+ I KDF+E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGL LGG KYMV+QGE+GAVIRGKKG  G+T+KKT QAL+FG+YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 KLGDYLIDQGM 132
           +LGDYLI+ G+
Sbjct: 121 RLGDYLIESGL 131

[Close]

BLAST of Lsi07G005310 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 208.4 bits (529), Expect = 3.5e-54
Identity = 94/134 (70.15%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEV---DGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEP 60
           MSWQ+Y+D+ LM +V    G HL AAAIIG+DGS+WAQS  FPQ+KP+EI+ IMKDFDEP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLAPTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNM 120
           G LAPTG+ L G KYMVIQGE  AVIRGKKG  GIT+KKT Q+++FGLY+EP+TPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 IVEKLGDYLIDQGM 132
           +VE+LGDYLI+QG+
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Lsi07G005310 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 205.7 bits (522), Expect = 2.3e-53
Identity = 92/131 (70.23%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEPGSL 60
           MSWQ+Y+DD LM +V G  L AAAI+G DGS+WAQSN FPQ KPEEI  I  DF  PG+L
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVE 120
           APTGL LGG+KYMVIQGE  AVIRGKKG  G+T+KKT  AL+FG+YDEPMTPGQCNM+VE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 KLGDYLIDQGM 132
            LG+YLI+ G+
Sbjct: 158 NLGEYLIESGL 168

[Close]

BLAST of Lsi07G005310 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 204.9 bits (520), Expect = 3.9e-53
Identity = 91/134 (67.91%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MSWQSYIDDQLMYEV---DGQHLKAAAIIGNDGSIWAQSNGFPQYKPEEISAIMKDFDEP 60
           MSWQ+Y+D+ LM +V    G HL AAAI+G+DGS+WAQS  FPQ+K +E S IMKDFDEP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLAPTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNM 120
           G LAPTGL + G+KYMVIQGE GAVIRGKKG  GIT+KKT Q+ +FG+Y+EP+TPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 IVEKLGDYLIDQGM 132
           +VE+LGDYL++QG+
Sbjct: 121 VVERLGDYLLEQGL 134

The following BLAST results are available for this feature:

BLAST of Lsi07G005310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941H7	2.9e-61	81.68	Profilin OS=Litchi chinensis OX=151069 PE=1 SV=1	[more]
Q9XF38	3.8e-61	78.63	Profilin OS=Pyrus communis OX=23211 PE=1 SV=1	[more]
A4KA41	5.0e-61	80.92	Profilin-5 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]
Q9M7N0	6.5e-61	79.39	Profilin-3 OS=Hevea brasiliensis OX=3981 PE=1 SV=1	[more]
Q9XF40	1.4e-60	77.86	Profilin-1 OS=Malus domestica OX=3750 PE=1 SV=1	[more]

BLAST of Lsi07G005310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHQ2	3.3e-68	96.18	Profilin OS=Cucumis melo OX=3656 GN=LOC103489979 PE=3 SV=1	[more]
A0A6J1ITQ4	1.3e-67	95.42	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111479863 PE=3 SV=1	[more]
A0A0A0LBL9	1.7e-67	95.42	Profilin OS=Cucumis sativus OX=3659 GN=Csa_3G435030 PE=3 SV=1	[more]
A0A6J1GUQ5	1.7e-67	95.42	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111457625 PE=3 SV=1	[more]
A0A6J1DH42	2.6e-65	90.84	Profilin OS=Momordica charantia OX=3673 GN=LOC111021021 PE=3 SV=1	[more]

BLAST of Lsi07G005310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880043.1	2.8e-69	97.71	profilin-like [Benincasa hispida]	[more]
XP_008447563.1	6.9e-68	96.18	PREDICTED: profilin-like [Cucumis melo]	[more]
XP_022980486.1	2.6e-67	95.42	profilin-like [Cucurbita maxima]	[more]
XP_022955703.1	3.4e-67	95.42	profilin-like [Cucurbita moschata] >KAG6581872.1 hypothetical protein SDJN03_218...	[more]
XP_004149180.1	3.4e-67	95.42	profilin [Cucumis sativus] >KGN58022.1 hypothetical protein Csa_009746 [Cucumis ...	[more]

BLAST of Lsi07G005310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19760.1	3.2e-55	74.22	profilin 1	[more]
AT4G29350.1	1.6e-54	70.99	profilin 2	[more]
AT2G19770.1	3.5e-54	70.15	profilin 5	[more]
AT5G56600.1	2.3e-53	70.23	profilin 3	[more]
AT4G29340.1	3.9e-53	67.91	profilin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 27..40 score: 69.61 coord: 84..99 score: 74.77 coord: 71..80 score: 89.64 coord: 117..130 score: 77.01 coord: 1..14 score: 63.77 coord: 104..117 score: 85.97 coord: 52..66 score: 82.79
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 64..78 score: 69.0 coord: 113..130 score: 68.19 coord: 40..60 score: 56.19 coord: 21..30 score: 61.5 coord: 3..12 score: 59.75 coord: 100..113 score: 62.86
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 1.2E-61 score: 220.8
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..131 e-value: 2.2E-44 score: 150.7
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..131
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..131 e-value: 7.61328E-56 score: 168.658
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..131 e-value: 1.5E-55 score: 188.9
None	No IPR available	PANTHER	PTHR11604:SF29	PROFILIN	coord: 1..131
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G005310.1	Lsi07G005310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding