Lsi07G005140 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi07G005140
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbet1-like SNARE 1-2
Locationchr07: 5385034 .. 5396276 (+)
RNA-Seq ExpressionLsi07G005140
SyntenyLsi07G005140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACTGTTTTTTCACATGGGAGGAGTATTGTGCTCTCGAGATCTTCTCTATGCACTTATTGGGATCTAATCCTAGGGTTTTGTTATGTAGGTTTGAACAGTTTGATTGAGGTTTAGAGACAATTTAAGGAGTGGGCGACCATGAGAAAAATTTATTAGGTTCAAGGTCGAAAGGCGAATTTAAATCATAAATTTTGTGGATAAATTCTTTAAATTTTGAGTAAACTTACAACACGTGTTTAGGCCTTAAATATTGAAGCTAAATTGTGGATTTATGAATTTCAGCCATAATTTTCCTTATTCTAACTTGGGTTTCGTGGTGTCTTTGTGAAGTGGTCGTCTTCTTCAACATATATTTTGGAATTTATCAATACTTTAGAGCTTTGGATTTTTCGCATTTTCTATTTGAAAGTTGAATTTCGACAATTCATTCATGAACTCAGGTAATTTTTGTCTCCCTTTTAAATCCAATCGGTCTCCATGTGTGTATTATAGTGTGGAGTATGAAATTTAGAGGCCTTTAGGTCTCTCACATTGGCATTCACATTACATCTGTGTGTATTATAATGTGGAGTATGAATAATTATCGTGTAGTTTATGCTTGTGGAAGTTCATTCTCTAGCTTTTGCATAGTATTGTGTTATGGTGGTAGTTACTGGTCAATGATTTATAAGAGATTGAATTCTTTGTTAGATATGTTGAATTTCTGATCGTGATATGGAAATTCTTTTATCGTTGACACTCCTTTAGTTTGATTTTACAGAGTGGAAATGACACTTAAGGAACTTTAAAAAAAATTTCAATTGGTTTTGAGAGTTCAAAAAACAATTAGGCCCTTTTTAAGTGGTTTTGGAATCAAAGTGCACTTATGCACTTTTTAGATTGTTTTAAGAGTCAAAATGTCACTTATGCATTGTTTTGGTTGTTTTGAGAGTCAAAGTGACACTTATGCATTATTTAGCTTATTTTGAGAGTCAAAGTGACACTTATATGCACTGTTTAGGTTGTTTTGAGAGTCAAAGTGGCACTTATATGCATTGTTTAGGTTACTTCTTGTATGTAAAAGGTCCAAGCCCATTATTGTTGGCTGGGTTGGCCTTACTCGTTTTTCTTCTCCTCTTTATGTAATCTGTTATGGAATTCTTCTAGAATTATTCCTTCGATTAGTGAAGAAAATCAGACGTGGGTGTGTATTTTTGCAAGAGTTTTTCTCCCAAGCCATCTATATATGGCTGGTATTCTACACCATTTTAATATAGAAGCCAAAGGTTTCTCTTGCACCTCTCTGCCTTTTATTTCTGTTACATTTTTTTCAATTAAGCAGACATTCTGGCTGAAGAAGAACGTATTTCGCTGAACTAAGCCCGTGATGAGTTACAGAAGGTTTGTATACAAAATCTTCGTCGATGCACAGTTCAGTTAATGTTATTTAGCTATTCCACCAGACTGTTCCGTTGCAATGCGAACTATATGATTTGGATCTGAGGACCTCTTTTTTGTTTAAACTGAATATGCTTCCATTAGTGTCTAAAATTCTGATTTCTGCCTTCTTTTGTTGTTATTTTCGTTAATTAGCTCGCTAGAGTTGCTGTGATCTCATATTTCACGGCTTTTGCATGAATTGGTTCTGATCTTGTGTTATAATTCAATTATGATTTACATTTGAGTTCTTAATGAAGCAATTTGGGACAAAATAGTATGAAGTAAAGAGTAGATCGTTGCATCAATTTGTACGATAGGATATGGCTTTCGATCTGGTTGCATATCCCAGACACGAAAGTGCGTGAATCCCATGATGACTTAAAAAGCTACAACTTGATATTAATTTTCCATTTCTTGCTTCAATTTTAAGTTTTTGTCCATATTTTGGATAGTAATTTGAATGAAAGCATAATGAAGGTTAAATGTCTTCTCAATTCTAGAATTCTGGATGTTAGGGTCTTGTAATCCCATTATTTCTTCCTCCTTGGTTACATGGACTTAGCCATTTTTTATTCTATTGATTAAAATTTGTTAGACACAAACAATGGTATTGTTCTTGGATATCACAATCTCGGTTCTTGTACAATAATTGGTATATTGTTTCGTTTGAAATAACTGGTATTGTTTTTGTTCAAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGTAAGTTCTAAGCTGAGGGACGCTTCTTAATTATTAATTTATCTATCTCTGATCTTTTATATAAAAGGTTGTTCTGATTGAACACATTATATCCTATCCTTTTGAAGCAATTAGGATAGGTTCAATGTTAGGATAGGTTCAATGTCATAAGTTGAAGTGACTCTTTCTATGCTATAATATCTTAGAGCCCGTTTGGATTGACTTTCTAAGTATTTAAATAAGTTTTTATAAGTTCAACAAAGTGTTTATAAACACTTAAAAAATCAATCCAAACGGGCCCTTAGCCATTTAACTTAGTAAACTGTTTTTAAACAATCATTTTGGAATTGGGATCCTGTTGCTTCTCTCTTTGCTGTATGAGCATCTTAATTTATTATTCAGATGACTTTGCAATCCAGTGATTCATCCTCTTGCTTCAGATTCTTTAATCGTAGAAGAACAGGAATATTGAATAGGAAAAAGGATATGAAGCTTTTTCTTTCAAAATTTCTTCTATATTTGTGCATCTTAGTACTTGAATTTGAGTATGATAATTCGTTCATCTTAGCATCAAGTGCCATACCATTGATGCAAAAGACTTCTGTCCTTGAAGAGCTCTGGAATGGGCGAACTAGTAAATATTGAGTGGTGTCATTAGTTTAGACTAGTGGTATAAAGAACTCTCGGATATAATAAGTGGTTATAGGTCTCTGACTCCAAATTCCTTGTAATGACAAATGATTAATTTTCTGTTTGTCACTGCCTAAAATGGTAAATTTCAAGGCGTAAAAGGATTGCTGATGATTGGTGCAGTGCAGCATGAGATAGTACTTAAAGTAACACTTCGTTTCATATAGATACAGTTTAAATGATCACTAGATATCTCCGTCATCACTTAGTATACACACCATGGACTAGGTTTTTCTTAGTACTTCCATAACGGTGCTTACAGTTTCCATTTCCAGCAAGAAAGAATTCTGATCCCCTTCCTCGATTTGTCTTCTTGATCCAGCAACTCTTGATGTCAATATTGTTTGAAATAGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTACTTGACCGAATGGTATGTTGGTTCTTCACGGTTATTTATTTATGTCTGACTGTCTTGCGAGTGGAAAATGATTGGAGCATGTTTCTTTATGTGGATTTTATTCTAATAAGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTAATTGATCTAGCTCTTTTCAGCTCATTTTATTTAGGGGGAAATATGGCTATATTATATACATACGTTTAATAGGAAGGAAGAAAATGATGAGATAGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTCTTTGATGTTCAATTAGAGGGGTTTTTTTTTGTGTAATTCCCTTGGATTTGGGTTTTGTTCTTTGTAATTTCATTCCATCAAGGAAATTGTGTTATATAAAATAATAATAATGAAAAAAGAAAGAAAGAGATAGACACTGTGGGACTGAACTTACAAAATTTCTTTTGCTCGCAAAATTTTTCCTCCGACTTATGGGCAAACAACCATCCTTTGTTCCAAAAAACTAAGGTCCTGTTTGATAACCATTTGACTTTTGGTTTTTAGTTTTTGAAAATTAAGCCTATAAACACTTTTTCGTCCTCTAAATTTCTGGCTTTGTTATCTATTTTTTATTGGTTTTAAAAAACCAAGTCAAATTTTGAATACTAAAGAACGTAGGTTTTTAAAACTTGTTTTTGTTTTTTGGAATTTGACTAAGACTTCAACTTCTCTACTTTAAAAAAATGCACATCATTGTAAAAAATTGAGATGAAATAGACTTCATTTTCAAAAACCAAAAAACGAAATGGTTAACAAAGGGGGCCTAAAAGATAAGCAATATCAAGCCCTAAAAATTTGGCAGTACATTCCTTCATCTTGCAAACGATCTATTTGCATGCATTCTCCTAATTCAAATGTTCATGTTGTACAGGTTTTCGAGCAGAAATCTAAGTGGAGAACTTGTAGACTTGCATTGTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTAAGAATTCAGCTCAGCAGATCACTTTGTTCCTCAACTTTTTCCAACATTGCTCTGTTTTTTTGCGTTTAACATGGTCAGTAAGTATCCGTGCTATCCATGCTGTTTGCTCGAGTCTGAATTACTGAACCTATGCATGCAGTCATTAAATTAGACCATTTTATTGAGTTCTTTTAAATTTATCGAATTTTTCATTTACATTGTTATGTTAACAGCTTGCCGTGATGTTTTAGCGAGTATTTATTCCAGTAATTCTTTGTTGGAATGTTCAGTTTTCTTTTATATAGAAGGGGATGCAGTTTTGATATCCTTCTCTTTCTTGCATCTCAGCTTTTAGATTCAAATCTCCCCATTTTTGTATTTCATTTTTGGTTACCTTTTTCATTGGCATTCCATTTCCAGGTTCCTCAGATACTTCATGCAAAGTTAAAGTAAGGTGTCTATGTCGAATCAACTTGAAGCATGATTGTTATGACCTTTGTATAGTCCTGAAATATAGACCATAATTTTACTTTTAGTCTTATTTTGATACTCAGAATTTTTAAGTTTATTCTATTTTTGTTATATTTGATTATAAAAGAATTGCGACGCATTCATATATCTATGTTTGTGTCTTAGAAACGAGTTTATTAATTTAAAAAATTGTAATATATTTTCGTAATTATGACAACGTGAATATAAAAAATTTAATTACAAGTTCAATTGAATAAAGTATTGAGAGAGAATAACAAATAAAATATAGGTTAACTATTATTTTGGTCTCATATTTTAAAGTTTGTTCAATTTTAGTTTCTATATTTTCAATTGTCCAATTTTAGTCCCTATAATTTTTATAAATTTTAAATTTAGTCTCCAATGTTAGTTTGTTTTTTTAAAAAAAATATTTTTATTATCTATAGTATTTTTACTATAAATTTTAAAAATATACTCAAATATTGTATTTTCTTGCATGAAAATTATTATTATTATTTAATCGATTTATTTTTACCTTTGAGAAACTAAATTTAATAATTATTGAAAGTATGGGAATTAAAATTGAATAATTAAAAGTATAGAAATTAAAATTGAATAAACTTCAAAGTAAGAGACCAAATTGATATTTTAACTTAAAATATAATATCAAGTATCTTGTTGTGTCCGTAAAATATATTTAAATAATTAGTTTGAGTAATGCTTTTCTATACTAAAATTGTTGTCAAATTAGGTAAATGACACATTGTGTTAAAATATTACATGTGACTTATTTATTTATTTTTAGTTCAAACGAGAATAATGTGGGACTCGACCATTTTTTTTCTTTTGAAGTTTTATGTTAGAACATGTTTTTAACAAGACGTCTAATTTGACTGTTGATAATGTGTTAACAATCATTATTATGCTTTGCAACAATTTTTTCTCTTAAGCAAATAAATCCTTATTGTTATAAAAATTTTATTTGAAAAGTCACTAATGTGTAAAATATGTTAAATGAATGAAATGTATGAATCTTACAATGTCATAAGACACAAAAGCTTTATCTTAAAAGAAGAAACCGTTTTGCCATATGACTTAAAGCCTTTCTCAAAATAGATTAGTGTGATCTCTTCCTCCTAAGTTCTATTATGCTAACAACTAGTAATTAATATATTACAACGAACTTAAATTGAATTTTTTTTATACTACAATAGTACGTGTAATTCTATTTCATATTTGACATGTAATTATATGATAAAATTGGCAAAATATACTTTCGATCCAGAGATTTAGAGTTAGGATTTATTTGGTCCCTGATTTGAAAGGAATAATCTAGTCTCAAGTTTGAAAAATACTTCTAAATGATTATTGAGTTAATTTAACCGTTAGTTACTAAAGTGTCTATTCTAAAATTTTAAGAATTAAAGTATCTCTCTTGAAACTTCAAATTTTAGAGACTAAAAGTATATTTTGTCATATAATTTTTTTTTTTTTTTTTTTTGACAAATAATGACATAACTTGATATTTATATCGTGAGACATGGGGAATTTTAAATTGATAGCAAAAAATTATTATGAAGACAATGTAGAATCGAATAATTTTTAGATTGGAGACAAAATATGTTTAAAACGAGTCATACTTGGAAATGAAATTTGCCGTTTCCGTACAAAATTGTGTGTATAAATAACGTCATATTGCCTTTCCCAATATAAATGCCTTTTCAATTCTCTCTCCCTCAATTTTTCTAAATGGTTTTCTCAATGTTTTAAATTTTGTGTTCTCTCTCCTTCCATTTTATGTTCACCATGATCTTTGATCTAAAAAATTAATCACTTCATTTATACATACTTGCTATAAGGCACATGCATGGCACGTGGTCAAATTTTTTTTTTTTAATATCTATATTGGTGAAATTACCAAATGAATTTAAATTTTAGGGCTTCTATACTAATAGCTTAATTAAATAGGTCAAATTATAAAAATGTCTCAAATCTTTTTTCCATGAATAACCTATAATTTAATCAACTTGATTTATTTTAAAAACTATTTTTTCAGCTTTCAAAACATGACTTGTTTCTTTAAAATATTGGTAGAAAGTAAATGATCAAGCAAAACAGTTTAGCGGTGAAATTGGTATTTAAAGGTTTAATTTTTAAAATCTAAAAACTAAAAATTAAATGGTTACTAAACGAGACTTTAATTTTTGGTTTAAATCCTATTTTAGTCTCTGAACTTTGAATTTTGTTCTATTTTGGTTTTAGTCCCTAAACTTTTAAAAAGTGTTTATTTTAGTCTCTCCTATTAAAATTATGTAACTCTTCAATAGAAATGTGAGGGAGCTTATATTTTTGGATGACTAAGCTCTAAATGTATTAAGGAAGATGAAGGTGAAGTAAAATGTCAACAACCAACACACCTGACCAAAATTTTGTACTAAAAATGTTTTTTAAATTCTCCCACTTTGCCACTTATTTGGTAGCCTAGTCATTCAAAAATGCAAGTTACCTAGCTATTTTGTTAAAAAGTTGACAAAATCTTAATACAAGAACTAAAATAAACATTTTTTTTAAGTTCAGAGACTAAAATAAACATTTTTAAAAGTTTAGGGACCAAAATAAAACAATATTCAAAGTTGAGGAACTAAAATGGACATTTTTAAAAGCTTATGGACAAAAATAGAACATTATTCAAAGTTTAGAGACCAAAATAAGATTTAAACCTTAATTTTTTGTTTCTAAAATTTGTGTTTATGTTCTCACGCTTTATTAGCAACAATTTCCTCTTACCTAAGAAAACATTTGAATTAAAAGCCAAATTCTAAAAACAAAAATAAGTATGTAAACACTTACTTTTTTTTTTTTTTTCTTTTCCAAAACTTGACTTAGATTTTAAAAACATTACAATACTAAGAACTAACTAGTTATCAAACGAGACTCTAACCAATCTCATCATATCCACTGTGATTCATATAGTAGGCTAAGGATCATAAAATGTAAGTAATCTTCAAGTCATGCCTTTTTCAGCTTCTTCTGGCCAACAATGGTAGCAGATAAGTGCAAAGCAGCAGAAGGGAGGGAAGGCATTCTTCAACTGACTAATTGTATAATCCTTAATCCTATATGTTTTCATTTTCAACTTTTTCCTGCTAACTCAATAAGATATGTAAGAGAGATGTAATTTTGTATGCCTGATTTATGGTTTTCATCCTGATATCCTGATGTCCTGATATCTTCTGAACTCTCTTAGCTTATCAGCTGGGGTTTCCACAACATGATCCAGTTTCCTATCAGTCCCTCATCAGGTTGGGTTGGGAGCTATAGTATAATTTGCAAATTTATTCCCTTAAAGGCTCTAAAGATTGCTCATAGGTCGCATTCTTATTTACTGAAGTTGGGCGGCGAATACGAAACCAGTTGGATAAAGTCAATTTGAGATATAATATGCTACAACAGTGCTGGATTGAACAAAAAAGGGATCTCAGTATGGCCAATATATAAAACTGCCATGAACAAAAACCACTAGGAATATGTTTTGAACAGAGCATCTGTCCCTAAATTGACTTCGAATATGAAAAACAGAAATGGTAAGAAAAAAAATATGGCACTTCATAACTAGGGGACAACTACAAGATAAACAAACGCAGGTATGACCTTAACTATTGACAAGTAGAGTAAAATGCCTAATCTCTGCCAGACTTTCTCCCAACTATTGTTTAGATATCTGAATATAGACCATTTGTGTGTATCCGTTAAATACAGAAGTCTCAAGTCGAGTTAAACCAAGCCGCTGGAACAAACCGTACCTGCCATCTTCGACAATAGGGCTGGAAACACGAGCAGGGTCATATCTAGTTTGATGTGTTAAGGAAGGGCCAGCAACAGGAGGGACCTCCCAATAAACATCAAGAATTGACTCCAGGTACCTGCTATTTTGGAAGTGCTCTGCATGGGAAATAGCCCTATTACTATGGTTAAAATCATCACGCATGTAGCCTCGGACACCCCACCAAGATTCATATGGTCCACAAAGTTCTTCTATATCCACTGCTTTCTCCCAGAACAACTTCCTTTTTGCTCTGATTCTAGCTTCATCACTGTCCTTGAAGCAACTGTGCCCACCTCCTAAATCAGAAATATAAAAGCATTTGCATTAAAATAAACTACAATCACATTAGTCGCAGACACAAACTCACAGTATCACTTTCAAATAAGAGGACGCAACTCTTGAAAACAATTTTGAATTCATTATGTCCTAGAGATACTAGGAGAATCACATGGATCAGTTCTAAATTTCTCATTAGATTTCACTCTTCTGTATTAAGGAAGGCTCCTTATGCGAAAATCCTTATCTGATTACCCAATAGATGATGTGAAGAAGAAACTGTGTTGTCTTTTTACCTACGCTTATTCATATACAGTATAAAAACAAAGCAAAGTGGAATAAGATACAAATGGATGAGCAGGCACCTCTAATATAGAATTGATCGCACATCTGCCTTAAAGAATAGTGATCTCCTGTACCAGTATCATAGTTATCCTCAAAAACAAGATGTTGAAAGCCAGCTTTCAGAGCCTGCTTTATTCTGCACTCATATTACAAGAAAACTTTTCAGCATACCAACTTGTGTAGTAGTTAGATGGGCAACAAAAATATTTGATCACATTGAAATTCTGCATACCTCTTTAGTTCATTCTGATGGTCATCAAAAAATACAAGGACTCGACTAAGATCATCAATTCCACGTTTTTTCATCACATTTTTCCAAGCAACACTTCCAAAATCTACAAAGTCCTTTCCAGCAAAGTACGTACAGTTAGCATCAACATAAGCAGGCCCTTTCTTCAAGTATTTTTCGGGGTGACGAGGTGACAGTGAAATAATTGGCGTGTATGGCATTGCTTGCCGCAGCACCCAAGTAGAGTGTCCCTTGAATGCACCACTCTCGATCATCAAATCTGGCTTTAGCCAACGAGCAATGAACCAAAGGCCAAAGCTGTGGTCAAAGCCCATCCCATACATGTTATTTTTTATGGGACGGGTCTCATAAATTGGTACAAACTCTTCCAAGGCTTTTAGTAAATCTTTTGCAGTCCATTCCACTGTCTTTCCATGTTTCGATCTGCCTTTTGACAAGGATGGGATTATAAGGATTCAAACAAGCAACAAGTTTAGAAATTTCATGACATTTAATCAAACTAGAACCTAGAATAGTGAAGTCGGTGAGAATAGAACTAGTTCATTTATAATGAAACTTAATCGTAATCCAGAAAATTCAACATTATTAAATATTATCATGAATGTTTGAGTCTCAGTCTACACTGTTGTGACATAACTAGAAACTAACCAAGCTATTACTCGAGGAACATATCATCACTGAGGCCAGAACAGGTAGTCCAAGACTGAGTAAGGAGAAACTAGGAACTTATTACAACAAATCGCGGTACACAGATTCAATTCGACAAACGACGATGTATCCTTTTCATCATACGAAAAACAAATTAATTATAGTTCTGCATCTAACTTGCACAATGTGGATGACATCCATAAGCACTGAACACGGATCTAAAACTCAAAATGTCCAGAAAACTACAATGGATCGGAAAAAAATTCAAAGGGATAAACAAGAAAACTTACACCAGGGCACACCAAGAGAGCCGAAATCTGAATCCAGCCCGTCCATGCCGAAGAACCCAGAACGGGAAACAGGATCATAA

mRNA sequence

ATGCAACTGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGGCACACCAAGAGAGCCGAAATCTGAATCCAGCCCGTCCATGCCGAAGAACCCAGAACGGGAAACAGGATCATAA

Coding sequence (CDS)

ATGCAACTGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGGCACACCAAGAGAGCCGAAATCTGAATCCAGCCCGTCCATGCCGAAGAACCCAGAACGGGAAACAGGATCATAA

Protein sequence

MQLEHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTPREPKSESSPSMPKNPERETGS
Homology
[Close]
BLAST of Lsi07G005140 vs. ExPASy Swiss-Prot
Match: Q9M2J9 (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.2e-07
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKR 51
          E R  RS+LFD IEEGG+R +SS   EI EH+N++AL  L+DRV +LKR
Sbjct: 6  EPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKR 54

[Close]
BLAST of Lsi07G005140 vs. ExPASy Swiss-Prot
Match: Q94CG2 (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4)

HSP 1 Score: 51.6 bits (122), Expect = 4.4e-06
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 4  EHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          E+R+SR++LF   D +EEG LR SSS    E DND+AL  L+DRVS LKR T
Sbjct: 6  ENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVT 57

[Close]
BLAST of Lsi07G005140 vs. ExPASy TrEMBL
Match: A0A5D3CBG8 (Bet1-like SNARE 1-2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00760 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.4e-16
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTP 54
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR  P
Sbjct: 10 EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRVLP 59

[Close]
BLAST of Lsi07G005140 vs. ExPASy TrEMBL
Match: A0A0A0L808 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G469700 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLT 54

[Close]
BLAST of Lsi07G005140 vs. ExPASy TrEMBL
Match: A0A1S3BHN2 (bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLT 54

[Close]
BLAST of Lsi07G005140 vs. ExPASy TrEMBL
Match: A0A6J1C943 (bet1-like SNARE 1-2 OS=Momordica charantia OX=3673 GN=LOC111009526 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-15
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKR T
Sbjct: 7  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLT 55

[Close]
BLAST of Lsi07G005140 vs. ExPASy TrEMBL
Match: A0A6J1KMZ6 (bet1-like SNARE 1-2 OS=Cucurbita maxima OX=3661 GN=LOC111494805 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.5e-12
Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLR S S+VEIKEHDND+AL TLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLT 55

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: KAA0050807.1 (bet1-like SNARE 1-2 isoform X2 [Cucumis melo var. makuwa] >TYK08538.1 bet1-like SNARE 1-2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTP 54
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR  P
Sbjct: 10 EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRVLP 59

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: XP_038906835.1 (bet1-like SNARE 1-2 isoform X3 [Benincasa hispida])

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15
Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 3  LEHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          +EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDR+SILKR T
Sbjct: 1  MEHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRISILKRLT 50

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: XP_004151397.1 (bet1-like SNARE 1-2 [Cucumis sativus] >KGN58055.1 hypothetical protein Csa_010683 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLT 54

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: XP_008447527.1 (PREDICTED: bet1-like SNARE 1-2 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLT 54

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: XP_038906833.1 (bet1-like SNARE 1-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 91.7 bits (226), Expect = 2.9e-15
Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDR+SILKR T
Sbjct: 16 EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRISILKRLT 64

[Close]
BLAST of Lsi07G005140 vs. TAIR 10
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A )

HSP 1 Score: 54.7 bits (130), Expect = 3.7e-08
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKR 51
          E R  RS+LFD IEEGG+R +SS   EI EH+N++AL  L+DRV +LKR
Sbjct: 6  EPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKR 54

[Close]
BLAST of Lsi07G005140 vs. TAIR 10
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein )

HSP 1 Score: 51.6 bits (122), Expect = 3.1e-07
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 4  EHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          E+R+SR++LF   D +EEG LR SSS    E DND+AL  L+DRVS LKR T
Sbjct: 6  ENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVT 57

The following BLAST results are available for this feature:
BLAST of Lsi07G005140 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M2J95.2e-0759.18Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1[more]
Q94CG24.4e-0657.69Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4[more]
BLAST of Lsi07G005140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CBG86.4e-1694.00Bet1-like SNARE 1-2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0L8081.1e-1595.92t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365... [more]
A0A1S3BHN21.1e-1595.92bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1[more]
A0A6J1C9433.2e-1593.88bet1-like SNARE 1-2 OS=Momordica charantia OX=3673 GN=LOC111009526 PE=4 SV=1[more]
A0A6J1KMZ69.5e-1286.00bet1-like SNARE 1-2 OS=Cucurbita maxima OX=3661 GN=LOC111494805 PE=4 SV=1[more]
BLAST of Lsi07G005140 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050807.11.3e-1594.00bet1-like SNARE 1-2 isoform X2 [Cucumis melo var. makuwa] >TYK08538.1 bet1-like ... [more]
XP_038906835.11.3e-1592.00bet1-like SNARE 1-2 isoform X3 [Benincasa hispida][more]
XP_004151397.12.2e-1595.92bet1-like SNARE 1-2 [Cucumis sativus] >KGN58055.1 hypothetical protein Csa_01068... [more]
XP_008447527.12.2e-1595.92PREDICTED: bet1-like SNARE 1-2 [Cucumis melo][more]
XP_038906833.12.9e-1593.88bet1-like SNARE 1-2 isoform X1 [Benincasa hispida][more]
BLAST of Lsi07G005140 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G58170.13.7e-0859.18BET1P/SFT1P-like protein 14A [more]
AT4G14455.13.1e-0757.69Target SNARE coiled-coil domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availablePANTHERPTHR12791:SF46BET1-LIKE SNARE 1-1coord: 4..50
IPR039897BET1-like proteinPANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 4..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G005140.1Lsi07G005140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
cellular_component GO:0030173 integral component of Golgi membrane