Lsi07G005050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G005050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ras-related protein Rab7
Location	chr07: 5308634 .. 5312998 (+)
RNA-Seq Expression	Lsi07G005050
Synteny	Lsi07G005050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGTTATTTTTGTTCCCTCAATCTCTTCTCTTTCTGCAGGATTGCTGCTGAATTCGAAATTTAAGTGCGTTAATCGACTTGTTTGTTGATCGGTAATTAGGGTAAGGGAACGGGAAGTTTCGGTAAAAGGAGGAACAAGACCCACACTCTCTGTGTTAGGTGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCTGCCTGTGCATTTCCGGCCGCCCGTAAGCGTAAATGTAAGTTCGCCTAATCAGTTTGTAGTTTGTGTTTCTTGTTTCATCATTTTACAATTAAATCTGTTTTATTTACTTTGATTAATTTGATTCTTCGATTAGAAGTGGTAATTTTAGATCCCCCATTATCGGTCCAGATAGCAGTAGATTCGTTCTGTGTGTCCTAATCTGTTTGAATGAGTTTGTTTTGCTTTGAGTCTTCGATTTTGGTTTATTTGTTCGTTTGTCTTATGGGGGGTTTTGGATTTAGATAACTGGAGCGTCAAGGCGATCCGCAGGAAGACCACTGGAACTGGGCGGATGAGATATTTGCGCCATGTTCCTCGCAGATTTAAGAGTGGTTTCAGAGAAGGTAGAAGTCTAAATTGTGTAATTCTTGCAGTTTTTACTTATCAACGTGATTCTTTTGGGGCATTTTGTGATTTTAATTACGTTCGGGTTCTGTGATTAGGTACTGAAGCAGCGCCAAGGAACAAAGGAGCAGCAGCATCAGCCTAAGACATCGAAGGTTAATTGTGGCACAACTTGGTACCTTTATAGCTTCTAGGAGGATTTTGTCATTTTTGGGATAGAATTTATAAGAATTTTGTTTGATGATGTTATTGCCTTCAATACTGAAGCTCATTTTCATTTCTCACTATTTTGTTTATGGAATTTCTGGTGATTGTTTTCAGACCACTTTCACCTTTGGTTAATCTATGTCTTGAATTATATACTTCTAACCATTTTAGGAGGTTTTTGCTGGTGGATATTGTTACCCTGAATGCCAGGGTAGAATCTATTAGCAAGAAATTTGGGTGTCATGATCATGTGTTGCTGTTTGAGTCATTCCTTATTCTGGGTCACAGCCTCTCAGGCTTGCATGTTTGTTAATTTATATTATGTATATTTTTTCCCTTGACCATGATTAGGGTTGATAATCCAGAATAAACAGAGAAATTTTGTATCACTCGTCAATAGGTTATTCTATAATTACCATTTAACGAAGTAAACCACTCGTTTAGATATGTGGTTGAACATCAAAAACTACAAGAAAGGGCTGGCATCTTTTTGGGATCATAGTATCAGTAAATTACAAAAAGGCTTTAGGAACAAAGAACTAAATAAAGATGTTCAAATGCATAAATTCTAAACTCTCTTATCTAGAACCTTTTAAGCCTTGAAAAAGAAACCCTACTATGCATACCAGATGCATCTAAAACACCTGGCCTCTCGAAGAATACAATTTCTATCCTAGGAAAGATGATGTTGACAATACCACGAGTTACTGAGTGTGCTGAAGCCAAAGCCACCATTAGAAATTTACTAAATCATCCATCAAATCTTGAGTGTAAAGAGGTAAGTTGAAAGAATGTTGGTTCAAGATCTCTCCTACCTTCTTGCACAGAACACGCCGATGATGTTTAATTAGCAAAACGAAGATCTCTATTATGTTCAAGTGTGTTGAGTTGGTTGACCCTCCTGCGAGCTATATGCCAACTGGAAAACCTTACCTTAACGGGGATGCAGAAATTTCAAAAGTAGAGGGTGACTAAACAAGGGTTTAAATGCTGTAGGATTTTTAAGGATTGGAAATAGTGTTCCCGACGAACAAGGTAGGACTGTTTTGTTACATATTTGTTGTGTTGATTTCTTATCATCCTTTCGAATTACTTTTGAATTATTAATCAGCCTCAAGGTTGGTTACATCTTCGGTGTCTTGATTTCTTATCATCCTTGTACACTTCCAATATGAGGACAAGTGATATTCGTTCGAATGAAAATGTTGGGAATTTCATTGGATTGAACAGCATTGTAGTCTATACCCAATACCAAAATCACTTCAAGAAATGTTCTTTTAACAATTTCATGTTTTCTAATATGTTGCTTGTGAAGTTTACTTGTCAATGTTAACTATAAACATCAATGTGGTTTGGAGACATGTCAATATGTAGTTTTAGGGTTAAAATCACTGCTTAGAAAAATTTAGGGTTCTTGAACTCATGACTATTAAGGAAGCCTTTCTTAATTGGAAGAGTGTGTTTTGGGTTCATCGTTGTGTAGCTAATTTTTAGATGGTTAAAATTTTATCACTCTTAAGTATGCCTTTTATATTCAAAATCAATGTAATGATTGACTTCACACTTTTAAATCTAATTTTTATATAATTAAAATGGATTTTTGAATGATTAAAAGCATGTGTTTGTGTGATTTTCGATTTTGAAAATGAGAAAGGTAATTACAAATTCAAGATCACTCCAACCATGGTTCACCAACAAATTTTTGAATAGATGTTTTTTTTGAATATATGTTTGGCTTAATATGCTGTTTGGAATAAAAAAAAAAAACATTTTCTGCTCATTACATTGTTTTTAAACTAATTTTGAATAAATGTTAGAGGAAATATTTTTATTTTTCATATCCCAAATATGCTCATGCAATGGCAAATGACAAACTTATATTGAATAAAACAACAAACTTTTATTAAAAAATCATGAATTGTGATCAACTGGAGCAACATCATGTTGTAAAAATCTGCAAAATATTAAGATTCAATTATTGGTTAATTCAAATATCATGCAAACCACAAATAATGGTATCATAAAGGAAAAACTCTCCAAAATGACATGAGTTCTGGTCTTTTACCTGTTGCTTAATCATTTAGTCAGTTGTTACACTTGATAGGGTTCTAGTTTGAGAATAGCACTTAAATTATAAGTGCATTGTTTTTTCATTCCCTACACCAATTATAATATACGTTCAACATGTCTAAAATAGTTAAATATGTAATATCCTCTGTCGACCCCAATCAACTTTATACTCCTTAGATCTTATTTTATGCTTTGAATGTTGAAAGAAGAATTTTCTAGCCATAATCAATTTTAATATTTCAACTTTTCATCTGCATTGATAAAATCAAAAGGTTCAAATTCATCTAAACTTATCGAACCGAAATCTATTCTTTTGTGAATTTTAAAATTTCTTGAGGTAAATTGCTAAACAACTTCAAATTATTATTCAAATGATTATTAGCTGAAACTTAAATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTGGCCCAAAAATATTTTTTCTTGTCAAAATTCTTTGTTTTTTTAATATATTATAGTCAGATTAATATTTAATTAATGTCAAGTAAATTTTTTTTCTATATATATTTGTAAATAGTTTGACTCATTTTTTTATATTTGAAAACAATCTTTTTATTTACTATTGATAATTGAATAATTAATTAAAAACTTTGAGAGATTAGGTACACAATGTTTTTCACAAGTTAATAGATCAATGTCTTATTTTCTCAAAAAATATTTTAAATATAAAATGAAAATAATATAATTGATTTATTATCTATTGTGGATAACAAATATTTTGAATAAAATAATATTTTTTCAACAAAACTTTAATATTCATTTTTTTTAGGAATAACATACATTTTGAATTATAGATATATATTGCAGATAAATATATATTATAGACAATAGGTATAGATTTAGTTCTTTTTAACTGGAACTCAATCACACGCGTGTGCGCGGATGGTCGCCACGTGGCTCCTTCCTCTTTATTTATTTGAAGATCCCGTCCGACAATAAATTCCAATTCTTGCATTTTCCAAAATTAGGGTTTCTCATTCTTTCTCATTGTCATGGACGCAGCTGAACAGCACAATCCCAAACCAGGTTTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAAGATTGTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCACCGCCGTCAAATCCAGGGCCACCGGCCTTCTTTCTCCCTCTGACGATGATGATCCATGGTCGCCTACTTCCAGACTACCTACCGATGTCGTCACCGGAATCTTGCCGGACCGGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGAAATTGCCGGAATTTGGTGGAGACGAGGTCGTTATTGGGGGAATGGAGGAGAGGAGAGGGAAGGTTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCAAGAAGGAGAAGAAGAGCGGCGAAGAGGAGAAGAAACCTATTTTAGGTGAAGGTTTTGCTTGA

mRNA sequence

ATGGCGAAGGTAAGGGAACGGGAAGTTTCGGTAAAAGGAGGAACAAGACCCACACTCTCTGTGTTAGGTGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCTGCCTGTGCATTTCCGGCCGCCCGTAAGCGTAAATGTACTGAAGCAGCGCCAAGGAACAAAGGAGCAGCAGCATCAGCCTAAGACATCGAAGGGTTTCTCATTCTTTCTCATTGTCATGGACGCAGCTGAACAGCACAATCCCAAACCAGGTTTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAAGATTGTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCACCGCCGTCAAATCCAGGGCCACCGGCCTTCTTTCTCCCTCTGACGATGATGATCCATGGTCGCCTACTTCCAGACTACCTACCGATGTCGTCACCGGAATCTTGCCGGACCGGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGAAATTGCCGGAATTTGGTGGAGACGAGGTCGTTATTGGGGGAATGGAGGAGAGGAGAGGGAAGGTTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCAAGAAGGAGAAGAAGAGCGGCGAAGAGGAGAAGAAACCTATTTTAGGTGAAGGTTTTGCTTGA

Coding sequence (CDS)

ATGGCGAAGGTAAGGGAACGGGAAGTTTCGGTAAAAGGAGGAACAAGACCCACACTCTCTGTGTTAGGTGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCTGCCTGTGCATTTCCGGCCGCCCGTAAGCGTAAATGTACTGAAGCAGCGCCAAGGAACAAAGGAGCAGCAGCATCAGCCTAAGACATCGAAGGGTTTCTCATTCTTTCTCATTGTCATGGACGCAGCTGAACAGCACAATCCCAAACCAGGTTTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAAGATTGTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCACCGCCGTCAAATCCAGGGCCACCGGCCTTCTTTCTCCCTCTGACGATGATGATCCATGGTCGCCTACTTCCAGACTACCTACCGATGTCGTCACCGGAATCTTGCCGGACCGGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGAAATTGCCGGAATTTGGTGGAGACGAGGTCGTTATTGGGGGAATGGAGGAGAGGAGAGGGAAGGTTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCAAGAAGGAGAAGAAGAGCGGCGAAGAGGAGAAGAAACCTATTTTAGGTGAAGGTTTTGCTTGA

Protein sequence

MAKVREREVSVKGGTRPTLSVLGVAAAASTCRRVDALPVHFRPPVSVNVLKQRQGTKEQQHQPKTSKGFSFFLIVMDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

Homology

[Close]

BLAST of Lsi07G005050 vs. ExPASy TrEMBL
Match: A0A5A7U9B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001030 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69
Identity = 136/154 (88.31%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE HNP+P FFDQILPPRLEDAGLED ALPPDSIREAFFKAA+AVKSRAT LLSP D
Sbjct: 1   MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60

Query: 136 D--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEERRGKVC 195
           D  DDPWSPTS LPTD+VTGILPD DAPAICAT+KGLKLPEFG DEVVIGGMEERRGK C
Sbjct: 61  DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120

Query: 196 VVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           VVDGLEGLEIGDEA+KEKKSG+EE+KPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154

[Close]

BLAST of Lsi07G005050 vs. ExPASy TrEMBL
Match: A0A1S3BI85 (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69
Identity = 136/154 (88.31%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE HNP+P FFDQILPPRLEDAGLED ALPPDSIREAFFKAA+AVKSRAT LLSP D
Sbjct: 1   MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60

Query: 136 D--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEERRGKVC 195
           D  DDPWSPTS LPTD+VTGILPD DAPAICAT+KGLKLPEFG DEVVIGGMEERRGK C
Sbjct: 61  DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120

Query: 196 VVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           VVDGLEGLEIGDEA+KEKKSG+EE+KPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154

[Close]

BLAST of Lsi07G005050 vs. ExPASy TrEMBL
Match: A0A6J1GBZ4 (uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC111452587 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 6.4e-59
Identity = 120/160 (75.00%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+A+KS AT  LS  D
Sbjct: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60

Query: 136 DDDP--------WSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEE 195
            +D         WSPT+ LPTDVVTGILP+ D PA CAT KGLKLPEF  D VV+GGMEE
Sbjct: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120

Query: 196 RRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           RRGK CVVD LEGLE+GDEAKK+KKSGEEE++PIL EGFA
Sbjct: 121 RRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFA 160

[Close]

BLAST of Lsi07G005050 vs. ExPASy TrEMBL
Match: A0A0A0LDD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 7.3e-55
Identity = 120/155 (77.42%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE HNP+P FF QILPPRLEDAGLED ALPPDSIREAFFKAA+AVKSRAT  LS SD
Sbjct: 1   MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSD 60

Query: 136 DDD---PWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEERRGKV 195
           D+D   P SPTS LPT        D DAPAICATKKGL+LPEFG DEVVIGGMEERRGK 
Sbjct: 61  DEDDDVPCSPTSALPT--------DEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKG 120

Query: 196 CVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           CVVDGLEGLEIGD+A+KE    EE+KKP+LGEGFA
Sbjct: 121 CVVDGLEGLEIGDDAEKE-SGKEEKKKPVLGEGFA 146

[Close]

BLAST of Lsi07G005050 vs. ExPASy TrEMBL
Match: A0A6J1K989 (uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 7.1e-50
Identity = 106/146 (72.60%), Postives = 115/146 (78.77%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSI EAFFKAA+A+KS ATG LS  +
Sbjct: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSICEAFFKAASAIKSTATGFLSSDE 60

Query: 136 DD--------DPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEE 195
            D        D WSPT+ L TDVVTGI P+ D PA CAT KGLKLPEF  D VV+GGMEE
Sbjct: 61  GDDSDGYGVEDKWSPTAALSTDVVTGIWPELDPPAACATDKGLKLPEFDLDGVVVGGMEE 120

Query: 196 RRGKVCVVDGLEGLEIGDEAKKEKKS 214
           RRGK C VD LEGLE+GDEAKK+KKS
Sbjct: 121 RRGKGCAVDVLEGLEVGDEAKKKKKS 146

[Close]

BLAST of Lsi07G005050 vs. NCBI nr
Match: XP_038900451.1 (uncharacterized protein LOC120087668 [Benincasa hispida])

HSP 1 Score: 274.6 bits (701), Expect = 7.5e-70
Identity = 138/152 (90.79%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAEQHNP PG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+AVKS AT LLSPSD
Sbjct: 1   MDAAEQHNPNPGIFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAVKSTATALLSPSD 60

Query: 136 DDDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEERRGKVCVV 195
           DDDPWSPTS LPTDVVTGILPDRD PA+CAT+KGLKLPE GGDEVVIGGMEERRGK CVV
Sbjct: 61  DDDPWSPTSTLPTDVVTGILPDRDDPAVCATEKGLKLPEIGGDEVVIGGMEERRGKACVV 120

Query: 196 DGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           DGLEGLEIGDEA KEKKSG+EE KPILGEGFA
Sbjct: 121 DGLEGLEIGDEA-KEKKSGKEE-KPILGEGFA 150

[Close]

BLAST of Lsi07G005050 vs. NCBI nr
Match: XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 uncharacterized protein E6C27_scaffold404G00370 [Cucumis melo var. makuwa] >TYK08560.1 uncharacterized protein E5676_scaffold323G001030 [Cucumis melo var. makuwa])

HSP 1 Score: 273.1 bits (697), Expect = 2.2e-69
Identity = 136/154 (88.31%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE HNP+P FFDQILPPRLEDAGLED ALPPDSIREAFFKAA+AVKSRAT LLSP D
Sbjct: 1   MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60

Query: 136 D--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEERRGKVC 195
           D  DDPWSPTS LPTD+VTGILPD DAPAICAT+KGLKLPEFG DEVVIGGMEERRGK C
Sbjct: 61  DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120

Query: 196 VVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           VVDGLEGLEIGDEA+KEKKSG+EE+KPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154

[Close]

BLAST of Lsi07G005050 vs. NCBI nr
Match: XP_022949149.1 (uncharacterized protein LOC111452587 [Cucurbita moschata] >KAG7036479.1 hypothetical protein SDJN02_00096, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-58
Identity = 120/160 (75.00%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+A+KS AT  LS  D
Sbjct: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60

Query: 136 DDDP--------WSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEE 195
            +D         WSPT+ LPTDVVTGILP+ D PA CAT KGLKLPEF  D VV+GGMEE
Sbjct: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120

Query: 196 RRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           RRGK CVVD LEGLE+GDEAKK+KKSGEEE++PIL EGFA
Sbjct: 121 RRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFA 160

[Close]

BLAST of Lsi07G005050 vs. NCBI nr
Match: XP_023523630.1 (uncharacterized protein LOC111787807 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.1 bits (601), Expect = 3.0e-58
Identity = 120/160 (75.00%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+A+KS AT  LS  D
Sbjct: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60

Query: 136 DDDP--------WSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEE 195
            DD         WSP + LPTDVVTGILP+ D PA CAT KGLKLPEF  D VV+GGMEE
Sbjct: 61  GDDSDGYGVEDNWSPIASLPTDVVTGILPELDPPAACATDKGLKLPEFDVDGVVVGGMEE 120

Query: 196 RRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           RRGK CVVD LEGLE+GDEAKK+KKSGEEE++PIL EGFA
Sbjct: 121 RRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFA 160

[Close]

BLAST of Lsi07G005050 vs. NCBI nr
Match: KAG6606765.1 (hypothetical protein SDJN03_00107, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.3 bits (599), Expect = 5.0e-58
Identity = 119/160 (74.38%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 76  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSD 135
           MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+A+KS AT  LS  D
Sbjct: 1   MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60

Query: 136 DDDP--------WSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEE 195
            +D         WSPT+ LPTDVVTGILP+ D PA CAT KGLKLPEF  D VV+GGMEE
Sbjct: 61  GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120

Query: 196 RRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA 228
           RRGK CVVD LEGLE+GDEAKK+K SGEEE++PIL EGFA
Sbjct: 121 RRGKGCVVDVLEGLEVGDEAKKKKNSGEEEEQPILAEGFA 160

[Close]

BLAST of Lsi07G005050 vs. TAIR 10
Match: AT1G15230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 26 Blast hits to 26 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-20
Identity = 73/156 (46.79%), Postives = 86/156 (55.13%), Query Frame = 0


Query: 80  EQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP 139
           E    + G  D ILPP L DAGLEDCALPP+SI+EAF KAA AVKSRA  +    ++D  
Sbjct: 2   EATKERVGLLDTILPPALADAGLEDCALPPESIQEAFRKAANAVKSRAASIFDHEEEDGC 61

Query: 140 WS-PTSRLPTDVVTGILPDRDAPAICATKKGLKLPEF--GGDEVVIGGMEERRGKVCVVD 199
            + P       ++ G   +RD     A K   KL E    GD VV G  EE  GK C VD
Sbjct: 62  LADPIPETADKIIVGGDNERDTGPCLAGKGIEKLAESKQAGDLVVAGEGEE--GKSC-VD 121

Query: 200 GLEGLEI-GDEAKKEKK-----SGEEEKKPILGEGF 227
           GL+ L++ G E   EKK       EEE KPIL EGF
Sbjct: 122 GLKDLDVEGIERSSEKKDQSDEDEEEEMKPILVEGF 154

The following BLAST results are available for this feature:

BLAST of Lsi07G005050 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi07G005050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9B5	1.1e-69	88.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BI85	1.1e-69	88.31	uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=...	[more]
A0A6J1GBZ4	6.4e-59	75.00	uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A0A0LDD6	7.3e-55	77.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1	[more]
A0A6J1K989	7.1e-50	72.60	uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831...	[more]

BLAST of Lsi07G005050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900451.1	7.5e-70	90.79	uncharacterized protein LOC120087668 [Benincasa hispida]	[more]
XP_008447517.1	2.2e-69	88.31	PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 unc...	[more]
XP_022949149.1	1.3e-58	75.00	uncharacterized protein LOC111452587 [Cucurbita moschata] >KAG7036479.1 hypothet...	[more]
XP_023523630.1	3.0e-58	75.00	uncharacterized protein LOC111787807 [Cucurbita pepo subsp. pepo]	[more]
KAG6606765.1	5.0e-58	74.38	hypothetical protein SDJN03_00107, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi07G005050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15230.1	2.0e-20	46.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..227
None	No IPR available	PANTHER	PTHR36713	OS09G0344700 PROTEIN	coord: 76..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G005050.1	Lsi07G005050.1	mRNA