Lsi07G004770 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G004770
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Aspartate racemase
Location	chr07: 5025846 .. 5031516 (+)
RNA-Seq Expression	Lsi07G004770
Synteny	Lsi07G004770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATCTCAAGTTCTCCAATATTCCTCATTTTCTCTCAAGCTCTATCTACACGTAAAGTTTCTTTTTTTTTTTTTTTTTTTACCATTATGTTGTGTTATGTTTAATATTATGCTTTTTATATCCATCTTATAGTTAATGTAATGATTTTTGTATCCTTATTATGTTATGCTATGTTATGTAAGTTTAATGCTAGGTTTTTTGTATCCATTCCATTTTATAATAAACAATTTACAATTATTTTGTATGCAAATATTTCTTGTTCTTTAATTTTTTAATTAATTACCAATATTTGATATTATTTTGTAATTAGTTTTCCATTTTTTAAAAAAATTTGTTCATACACTTATAAAAATATTTATAATATATATTTAAATATTGTCTTATTTTATAAAAATGATGATTAAAATGGTCAATTATAGTCTAAATTAAACCACAATCAAAGTTCATTAACTAAATATAACAATTTCCATTCATTTTCATAAAGTTTCTCAAAATTTTCATAAAATCAGAACCTCAATATTTTGAACCTTCAATATAAGTATTATAAAAGCTAGTATTTTTTTGTAGTACAACAACTATAGAAATTGGAGATCGAACCTTTGACTTTTAGGTTGAAGGTCATTTCAATTAATGTTGAGCTAAACTCGCTTTCGCTTTATAAATGAGTATTTAAACCATGATTAAATTGGTTACCAAACAGAAATTTGAAAAAATGAAATAGAATCTATTGTTTCCAAATTTCTGCCTTGAGATCATTCACCAAAATTCTGATCCACGTTTGTTTTATCATCTCTTTTCCGGTGGGAAAAAAAAAATGAACGATCTGCATTCTACAGGGATCTTCACCGAAATTAGGATAAATGCTGTCTGGAAGCACGAGATTTTGTAGAAGTAGACAAGTGACTAAATTTATGTGAGCTGTTGTTCTGAGAACAAAGATTCCTCCCACTTCCACTTGCTTCAACTTCTACTTCCCCATCCATTTCTGAATGATTTCTCTCCCAAATATCCTCAAATCCAGGAGATTGTTTGTATTTCCTCCTTTTCTTGCCACTGCTGTTCTTGATCTTTCTTCTTCTTTGATCTCCTGATCTTCTTTGCTTTGATTGTTGAGAGAAAGATGATGTGGTTTTGTTTTAGGGATTGATATTGAATTTTCCCTCCATTTTGAATGCCAAAGAGGGGGTTTCCCCCTGTTTTGTTTGCTGATATTGCAGGTAATTTCATTATTCAATCGACCCAATAATGAGTTTGCTGTTCTTGTGATGGGAAATTGTTGACTGGGTTTCTTATTGTTGAAACCCAGATGATTTTGAGGATTGACAATGTCTTTCCAGCTGTTAAGTAGTCAATCTTGTATATCTGCTTATGTAAATACTCGTAGAAGTCAGCTTCAATGGAGGTTGAACCCTGTTCAGGCTGTACCACCATCAACTCTTTTGCACACTGATGAAAGTGAACATTTTCCGGAATCTAAAAAGAGTTCTGGGTTCAGCTCAGTATTGAAAACGGGTAAAGATTCAACTGGTATTTTGCTAAGTCAATCAAATGCAGTGGGTATATTAGGAGGATCTTCGGTGAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGAGAATCTGGTTTTCCTTTTGTTCTTTGCTCTGACCCAACTCTTAGTAAGGAGCTCCAAGTGTTTGATAGAAGTTCTCACCCAGTTCTCAACGGCAAGAGTGAGGATTTAGGGTTGGACTCTGGATTAGTAGTGGAGAGTTTGAAGAGTAAGAGAGCTTTTCTGGAGAATTCAGGTGCTCGTTGCATTGTTATGCCTTGTCAAATCTCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCACATGGCGGATTGTGTTGCTAGAGAGCTCAAGGAAGCTAAGTTGAAGCCACTGGAAGCTGGGAGTCCCTTACGGATTGGAGTTCTTGCAACCAATGCAATTTTAAGTGCAGGGTACTATCAGGAGAAACTGCAGAATGAAGTAGGCTTCTCTTCATAGTTTTTGAACTTCATAGATCTTGAAGATCTTATTGCTGTTTCTGAATGATTTTAATCGTACTGGAATCATCCTTGTATATATGTATGCAGGGATTTGAGGTGGTTCTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAAGACATAGAAGGGGCAAGGAATTTACTAAGAATTGCACTTCAAGTTCTTCTGGTGAGGGCTGTCAACTCTGTCATCCTTGCCTCTGATGATATAAAGGATCTTTTGCCCTTGGATGATCCCCTTCTTAAGAGATGCATTGACCCAATGGACGCATTAGCAAGGTCCACTATCAATTGGGCACAATGTGCTGAATAAGGTATTTGGTCCTACTCTTCCTCCTGTTACACTTTTCAAGATCTCAATTTGTTGTAAACTTGTTTGTCCTCACAACTTTGTACAAAAATAGTATAAGTCTACTGCATTGTTTTAAATGGTCAAGTTACGAATCATGTACAAGATCAATGCTGGTAGAATTGCTTATTTATCCAACACGACCTCTCTCATTTCATAGCAGAAGGAAGACCATTAATCAAATAGAATTAGAAATATGGAAATTATTTGAATACGGGTATACTATGTCCTTCCCCTTGTTTTAGTTTCAGCCTGCAATTTACTTCTCATTTAGATAATTACTCTTCATTTATGAAGCACCCATATTTGTCACAAAAGTTTATGACCCTATCTACAGTTAAAAAGGACATTTTGGCTCTTCCATTTTTCTCAATCTTATTGGTTTCCTCATAAAGGAACTATCTCCTTGCCATCAGATTTACTTTGCCAACTGGCTCTTTTATCTCTGGTTGCTCTTGAAAATAAGGAGTTAGGACTCATCACATTTTTCATTTAGACATCATGAGTTCATGGAAAAGATAGGAACCAAGCACATCAAGTGATGTAAATAGATCAAAAAAGTGTTTGATGATGATGCTGATATATTAGTCTCAGTAGATGTACATACTTTTTCTTTCTTCCCGTTCAATCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCTCCAAGATTCTTATTTTTTGTTTTAATTTAAGAAATCAAACTTTCATTGAAAAAATAAAAAGAAATAAGACGTGTTTCGAAATTTGTGTGAAATGCATTGTTGTTCACTTGGAATAACATGGATTGAGATTGACATATGTCATTATGAACAGTTTGTTGAGAATTATTGTCCTCAGAAAGTCGAAATGTGCAGTTGGGGTTCCCTCATGAACTGGAATGTTTTGTGGTAAGATGGAGGTATGGTGCAACAATGACTATAATAGTAATTACCTCTCTTTTTTTTTTTCTCTATTCTTGTTATCCATGAGTGTTCCAAGCCAGCTTAGGCACAACTCGACTAATTTTATAGGACAACCTGCATGACCTTGCGACATTTGGGTGCCAAGGAAACTCATAGGATGTGAAAACCTAAGTAAGTGGTCACCATGGATTGAACTTATTCCTTCTAATGTCTTTTATTGTACTATGAGTCCATGAACCTTATAGACTATTAGGCCAATCCATGATGGCAAAATTGTGGTCATCTCTGATTTTTGTTCTGTGTTCTATCTTGAGTAATGTCGTGTTTGATAACATGAGCAACATTTTACTAGATGGATCAGGCTTATGCCATGAGGGAAAATAAAACTTGCATTGCTTTTTCTTTTTCTTTTTCCCTTGTGAGAGGTTACAGGGCTGGTGGTTTAGAGGATGTTTGGCTTGTGATTCTAATTAATCTAGGTTTGTAAAGTCTGAAGTTGGAAATCCTCAAATTTATGTAACTTGTGGTTGGGTTGTACAGAAAAATGAGTTACAAAAATTAAAGTTTGTATAATCCATGTTTGGTTGGTGTGTTTTTTTATCAGTAAAATGTAACACAATTTGAGGATTCAAACTTTTGATTTCTTAGTAGATGATACATACTTTATGTTTGTTGAGCTATCTGTTAAGGTTAGCAGTAAACTTATATCTTGAGATGAACAAATCTGCATTTAACTATAAGCTTTACTTCTAAACATCGAGTTACACGGAGAGATTTTTGGCTTAGTTTCTCTTTTGTTCAATATTCAAAAGACTAATCCACATTGCTCGTACTGTACCTTTTTTTCTTTATGACATCCCTGTGTTGCACCATGCTCTCTGATCCTTGAATCTTGGGTCTATTTAATCTATCTCTCTTTTTTTTTTCCACTTTATTAAACAGTTACTAGGCCAAGGGTGGCCTTCTTGAATCATAGAACAGGTTTAGTCCATTCATTTTTCTCCCGAGTTCATACGGTTTAGCTCGACGAGTCAAATTCTTGGTAAAAATCTCCCTGAGGATGATAGTTGAATTTCTTTAGTCAAATACTTGAATTAGGGCCTCCTATTTTGTTACCACATCAAATCATACGACCACTTTGATAGGTTAGGTTGAATACTTAAGGACTTATTTTGATTGACTTTCTAAGTATTTATAAACATTTTTTTTTTTTTTTTGCACTTATAAACATTTAGAAAGCAAATTTAAATACACTCTAAGTTTATTCAAAGTATATATTAATGGCATTCAAGTTTTAGGAGTTGATATTATTTTTTCAAGGAAAAACTTACACTTTTAGTCCTTCAATTTTTAGATAGAAAAAATAACAATGGCTGTCATGGATAGAGGAGGGAGAAAGATGTGAGAAAAAAATATTTAAAAAGCTTTTTATTTTGAACAAATTAAACAAAAATGAATAAAAATATATTGCCATTGTCATCTTTCTATTAGTAATTAACATAAAATTGATGCTATTGACCAAAATGATACCAAAATCAAATCTCGAGCCCAAAGTGGACATACCTAACTTAATTGACATATAGTATGTGTTAGTGATTAAGAGGTTTGTGATTTGAATCCTTCCATCTTTATTGTACCCAAAAAAAAAGTCAAACATCAAAGTTTAAAATGTCGAGAAACTCATGGACCAAAATGCTGATAAATTCAAAACTCATAAATCAAAAATGTAATTTTTCCTTACTTTAACGGTTCAAAATATGTATGGGTCTATTGTTTCAATTAATATATATAATTTTTAGTACTGCATCGTTTATTTTAATTTAGCCGTTATGATTTGATTGTTTGAAACATTTTTTTTTGTGAAAAAAAATTGCTTGAAACATATCCATTTCCATGCTTAGATGGTTAAATAATGGAGAATTTTTAAAAATAAAAAAATATGAAAACTATTTACATAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTGACAGAAGTCTATCAGTGATAGAAATGATAGAAGTCAATGCTGATAAAAGTCTATCAATGTCTATCATTATTTTTTTTTGTTGCTATTTTTGTAAATAGTTTGACATTTTTCTATATGTGAAAACTTTCCTAAAATAATTAATCAAAATTGACCGAACTTTAAAACTAATAGTTATTTTCTATTTTTTTTCTTTCC

mRNA sequence

CAAATCTCAAGTTCTCCAATATTCCTCATTTTCTCTCAAGCTCTATCTACACGGATCTTCACCGAAATTAGGATAAATGCTGTCTGGAAGCACGAGATTTTGTAGAAGTAGACAAGTGACTAAATTTATGTGAGCTGTTGTTCTGAGAACAAAGATTCCTCCCACTTCCACTTGCTTCAACTTCTACTTCCCCATCCATTTCTGAATGATTTCTCTCCCAAATATCCTCAAATCCAGGAGATTGTTTGTATTTCCTCCTTTTCTTGCCACTGCTGTTCTTGATCTTTCTTCTTCTTTGATCTCCTGATCTTCTTTGCTTTGATTGTTGAGAGAAAGATGATGTGGTTTTGTTTTAGGGATTGATATTGAATTTTCCCTCCATTTTGAATGCCAAAGAGGGGGTTTCCCCCTGTTTTGTTTGCTGATATTGCAGATGATTTTGAGGATTGACAATGTCTTTCCAGCTGTTAAGTAGTCAATCTTGTATATCTGCTTATGTAAATACTCGTAGAAGTCAGCTTCAATGGAGGTTGAACCCTGTTCAGGCTGTACCACCATCAACTCTTTTGCACACTGATGAAAGTGAACATTTTCCGGAATCTAAAAAGAGTTCTGGGTTCAGCTCAGTATTGAAAACGGGTAAAGATTCAACTGGTATTTTGCTAAGTCAATCAAATGCAGTGGGTATATTAGGAGGATCTTCGGTGAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGAGAATCTGGTTTTCCTTTTGTTCTTTGCTCTGACCCAACTCTTAGTAAGGAGCTCCAAGTGTTTGATAGAAGTTCTCACCCAGTTCTCAACGGCAAGAGTGAGGATTTAGGGTTGGACTCTGGATTAGTAGTGGAGAGTTTGAAGAGTAAGAGAGCTTTTCTGGAGAATTCAGGTGCTCGTTGCATTGTTATGCCTTGTCAAATCTCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCACATGGCGGATTGTGTTGCTAGAGAGCTCAAGGAAGCTAAGTTGAAGCCACTGGAAGCTGGGAGTCCCTTACGGATTGGAGTTCTTGCAACCAATGCAATTTTAAGTGCAGGGTACTATCAGGAGAAACTGCAGAATGAAGGATTTGAGGTGGTTCTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAAGACATAGAAGGGGCAAGGAATTTACTAAGAATTGCACTTCAAGTTCTTCTGGTGAGGGCTGTCAACTCTGTCATCCTTGCCTCTGATGATATAAAGGATCTTTTGCCCTTGGATGATCCCCTTCTTAAGAGATGCATTGACCCAATGGACGCATTAGCAAGGTCCACTATCAATTGGGCACAATGTGCTGAATAAGTTTGTTGAGAATTATTGTCCTCAGAAAGTCGAAATGTGCAGTTGGGGTTCCCTCATGAACTGGAATGTTTTGTGGTAAGATGGAGGTATGGTGCAACAATGACTATAATAGTAATTACCTCTCTTTTTTTTTTTCTCTATTCTTGTTATCCATGAGTGTTCCAAGCCAGCTTAGGCACAACTCGACTAATTTTATAGGACAACCTGCATGACCTTGCGACATTTGGGTGCCAAGGAAACTCATAGGATGTGAAAACCTAAGTAAGTGGTCACCATGGATTGAACTTATTCCTTCTAATGTCTTTTATTGTACTATGAGTCCATGAACCTTATAGACTATTAGGCCAATCCATGATGGCAAAATTGTGGTCATCTCTGATTTTTGTTCTGTGTTCTATCTTGAGTAATGTCGTGTTTGATAACATGAGCAACATTTTACTAGATGGATCAGGCTTATGCCATGAGGGAAAATAAAACTTGCATTGCTTTTTCTTTTTCTTTTTCCCTTGTGAGAGGTTACAGGGCTGGTGGTTTAGAGGATGTTTGGCTTGTGATTCTAATTAATCTAGGTTTGTAAAGTCTGAAGTTGGAAATCCTCAAATTTATGTAACTTGTGGTTGGGTTGTACAGAAAAATGAGTTACAAAAATTAAAGTTTGTATAATCCATGTTTGGTTGGTGTGTTTTTTTATCAGTAAAATGTAACACAATTTGAGGATTCAAACTTTTGATTTCTTAGTAGATGATACATACTTTATGTTTGTTGAGCTATCTGTTAAGGTTAGCAGTAAACTTATATCTTGAGATGAACAAATCTGCATTTAACTATAAGCTTTACTTCTAAACATCGAGTTACACGGAGAGATTTTTGGCTTAGTTTCTCTTTTGTTCAATATTCAAAAGACTAATCCACATTGCTCGTACTGTACCTTTTTTTCTTTATGACATCCCTGTGTTGCACCATGCTCTCTGATCCTTGAATCTTGGGTCTATTTAATCTATCTCTCTTTTTTTTTTCCACTTTATTAAACAGTTACTAGGCCAAGGGTGGCCTTCTTGAATCATAGAACAGGTTTAGTCCATTCATTTTTCTCCCGAGTTCATACGGTTTAGCTCGACGAGTCAAATTCTTGGTAAAAATCTCCCTGAGGATGATAGTTGAATTTCTTTAGTCAAATACTTGAATTAGGGCCTCCTATTTTGTTACCACATCAAATCATACGACCACTTTGATAGGTTAGGTTGAATACTTAAGGACTTATTTTGATTGACTTTCTAAGTATTTATAAACATTTTTTTTTTTTTTTTGCACTTATAAACATTTAGAAAGCAAATTTAAATACACTCTAAGTTTATTCAAAGTATATATTAATGGCATTCAAGTTTTAGGAGTTGATATTATTTTTTCAAGGAAAAACTTACACTTTTAGTCCTTCAATTTTTAGATAGAAAAAATAACAATGGCTGTCATGGATAGAGGAGGGAGAAAGATGTGAGAAAAAAATATTTAAAAAGCTTTTTATTTTGAACAAATTAAACAAAAATGAATAAAAATATATTGCCATTGTCATCTTTCTATTAGTAATTAACATAAAATTGATGCTATTGACCAAAATGATACCAAAATCAAATCTCGAGCCCAAAGTGGACATACCTAACTTAATTGACATATAGTATGTGTTAGTGATTAAGAGGTTTGTGATTTGAATCCTTCCATCTTTATTGTACCCAAAAAAAAAGTCAAACATCAAAGTTTAAAATGTCGAGAAACTCATGGACCAAAATGCTGATAAATTCAAAACTCATAAATCAAAAATGTAATTTTTCCTTACTTTAACGGTTCAAAATATGTATGGGTCTATTGTTTCAATTAATATATATAATTTTTAGTACTGCATCGTTTATTTTAATTTAGCCGTTATGATTTGATTGTTTGAAACATTTTTTTTTGTGAAAAAAAATTGCTTGAAACATATCCATTTCCATGCTTAGATGGTTAAATAATGGAGAATTTTTAAAAATAAAAAAATATGAAAACTATTTACATAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTGACAGAAGTCTATCAGTGATAGAAATGATAGAAGTCAATGCTGATAAAAGTCTATCAATGTCTATCATTATTTTTTTTTGTTGCTATTTTTGTAAATAGTTTGACATTTTTCTATATGTGAAAACTTTCCTAAAATAATTAATCAAAATTGACCGAACTTTAAAACTAATAGTTATTTTCTATTTTTTTTCTTTCC

Coding sequence (CDS)

ATGTCTTTCCAGCTGTTAAGTAGTCAATCTTGTATATCTGCTTATGTAAATACTCGTAGAAGTCAGCTTCAATGGAGGTTGAACCCTGTTCAGGCTGTACCACCATCAACTCTTTTGCACACTGATGAAAGTGAACATTTTCCGGAATCTAAAAAGAGTTCTGGGTTCAGCTCAGTATTGAAAACGGGTAAAGATTCAACTGGTATTTTGCTAAGTCAATCAAATGCAGTGGGTATATTAGGAGGATCTTCGGTGAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGAGAATCTGGTTTTCCTTTTGTTCTTTGCTCTGACCCAACTCTTAGTAAGGAGCTCCAAGTGTTTGATAGAAGTTCTCACCCAGTTCTCAACGGCAAGAGTGAGGATTTAGGGTTGGACTCTGGATTAGTAGTGGAGAGTTTGAAGAGTAAGAGAGCTTTTCTGGAGAATTCAGGTGCTCGTTGCATTGTTATGCCTTGTCAAATCTCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCACATGGCGGATTGTGTTGCTAGAGAGCTCAAGGAAGCTAAGTTGAAGCCACTGGAAGCTGGGAGTCCCTTACGGATTGGAGTTCTTGCAACCAATGCAATTTTAAGTGCAGGGTACTATCAGGAGAAACTGCAGAATGAAGGATTTGAGGTGGTTCTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAAGACATAGAAGGGGCAAGGAATTTACTAAGAATTGCACTTCAAGTTCTTCTGGTGAGGGCTGTCAACTCTGTCATCCTTGCCTCTGATGATATAAAGGATCTTTTGCCCTTGGATGATCCCCTTCTTAAGAGATGCATTGACCCAATGGACGCATTAGCAAGGTCCACTATCAATTGGGCACAATGTGCTGAATAA

Protein sequence

MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAVPPSTLLHTDESEHFPESKKSSGFSSVLKTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGESGFPFVLCSDPTLSKELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLDDPLLKRCIDPMDALARSTINWAQCAE

Homology

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BLAST of Lsi07G004770 vs. ExPASy Swiss-Prot
Match: O58403 (Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=PH0670 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-13
Identity = 62/246 (25.20%), Postives = 113/246 (45.93%), Query Frame = 0


Query: 77  VGILGGSSVNSTVNFLGKLV-KWSTKDGESGFPFVLCSDPTLSKELQVFDRSSHPVLNGK 136
           +GILGG    +T     ++V K   K  +     ++ ++P      Q+ DR+++  + GK
Sbjct: 4   IGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNP------QIPDRTAY--ILGK 63

Query: 137 SEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDVSKGCPVTFLHMADCVA 196
            ED       ++ + K     LE  GA  I+MPC  +H + ED+ K   +  + M +  A
Sbjct: 64  GED---PRPQLIWTAKR----LEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEETA 123

Query: 197 RELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVVLPDKATMEHTVIPAI 256
           +++KE   K        + G+LAT   + +G Y+++    G E++ P +   +  +    
Sbjct: 124 KKVKELGFK--------KAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIY 183

Query: 257 EALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLDDPLLKRCIDPMDALAR 316
           E +   +++  R LL    ++L  R    +I    ++  +L  DD L    IDPMD +A 
Sbjct: 184 EGVKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD-LKVPLIDPMDVIAE 225

Query: 317 STINWA 322
             +  A
Sbjct: 244 VAVKVA 225

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BLAST of Lsi07G004770 vs. ExPASy Swiss-Prot
Match: P32968 (Uncharacterized protein in pnlA 3'region (Fragment) OS=Pectobacterium carotovorum subsp. carotovorum OX=555 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.3e-08
Identity = 39/147 (26.53%), Postives = 67/147 (45.58%), Query Frame = 0


Query: 175 WYEDVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQN 234
           W+ D+ + C    + + D   + +K A        +  R+G+LAT A + A  YQ+ L  
Sbjct: 1   WFNDLKQQCRAEMISIIDVTCQAIKHA--------NTTRVGLLATTATVKARIYQDNLIT 60

Query: 235 EGFEVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKD 294
           +  +   PD A  +H V+ +I A    DI GA +LL      LL   V  +IL   ++  
Sbjct: 61  DNIDCYTPDDAD-QHQVMESIYAYKSGDIAGAYSLLSPVKDRLLQAGVEKIILGCTELPL 120

Query: 295 LLPLD-DPLLKRCIDPMDALARSTINW 321
           +L  +     +  +D  + L + T+ W
Sbjct: 121 ILEQEVRTSPQHYVDATEELIKKTVEW 138

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BLAST of Lsi07G004770 vs. ExPASy Swiss-Prot
Match: P32960 (Broad specificity amino-acid racemase RacX OS=Bacillus subtilis (strain 168) OX=224308 GN=racX PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 6.7e-06
Identity = 54/253 (21.34%), Postives = 101/253 (39.92%), Query Frame = 0


Query: 77  VGILGGSSVNSTVNFLGKLVKWSTK----DGESGFPFVL---CSDPTLSKELQVFDRSSH 136
           +GIL G    ST  F+ K++ +  K      +  +P ++   C  P  +      D    
Sbjct: 2   IGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKK 61

Query: 137 PVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDVSKGCPVTFLH 196
            +++G  +                   LE +G   I +PC  +H++YE++ +   V  LH
Sbjct: 62  AIIDGAVK-------------------LEKTGVDFIALPCNTAHVYYEEIQQALSVPMLH 121

Query: 197 MADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVVLPDKATMEH 256
           + +   +E+     K +         VL T   + +  YQ+ L+  G EV+  D    + 
Sbjct: 122 IVEETIKEIPHPAKKAV---------VLGTEPTIQSAIYQKVLKGNGQEVIHKDH--WQQ 181

Query: 257 TVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIK---DLLPLDDPLLKRC 316
            V   I A+ + +       L   L   + +  + +I A  D+    D +  + P+    
Sbjct: 182 AVNQLIAAIKQPNHMQHTQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIPI---- 220

Query: 317 IDPMDALARSTIN 320
           ID    LA+ST++
Sbjct: 242 IDSSACLAKSTVS 220

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BLAST of Lsi07G004770 vs. ExPASy TrEMBL
Match: A0A0A0KVD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004850 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.2e-170
Identity = 310/327 (94.80%), Postives = 316/327 (96.64%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAVPPSTLLHTDESEHFPESKKSSGFSSVL 60
           M+FQLLSSQSCISAYVNTRR QLQWRLNPVQA+PPSTLLHTDESEHFPESKK+SGFSSVL
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPPSTLLHTDESEHFPESKKTSGFSSVL 60

Query: 61  KTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGE--SGFPFVLCSDPTLS 120
           KT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGE  SG PFVLCSDPTLS
Sbjct: 61  KTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTLS 120

Query: 121 KELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYED 180
            ELQVFD+SSHPVLN KSEDLGLDS LVVESLKSKR FLENSGARCIVMPC ISHLWYED
Sbjct: 121 NELQVFDKSSHPVLNYKSEDLGLDSELVVESLKSKRTFLENSGARCIVMPCHISHLWYED 180

Query: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240
           VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE
Sbjct: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240

Query: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPL 300
           VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKD+LPL
Sbjct: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDILPL 300

Query: 301 DDPLLKRCIDPMDALARSTINWAQCAE 326
           DDPLL+RCIDPMDALARSTINWAQCAE
Sbjct: 301 DDPLLRRCIDPMDALARSTINWAQCAE 327

[Close]

BLAST of Lsi07G004770 vs. ExPASy TrEMBL
Match: A0A1S4E0P1 (probable amino-acid racemase OS=Cucumis melo OX=3656 GN=LOC103494713 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.0e-170
Identity = 310/327 (94.80%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAVPPSTLLHTDESEHFPESKKSSGFSSVL 60
           M+FQLLSSQSCISAYVNTRR QLQWRLNPVQA+PPSTLLHTDESEHFPESKK+SGFSSVL
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPPSTLLHTDESEHFPESKKTSGFSSVL 60

Query: 61  KTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGE--SGFPFVLCSDPTLS 120
           KT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGE  SG PFVLCSDPTLS
Sbjct: 61  KTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTLS 120

Query: 121 KELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYED 180
            ELQVFD+SSHPVLN KSEDLGLDS LVVESLK KR FLENSGARCIVMPC ISHLWYED
Sbjct: 121 NELQVFDKSSHPVLNYKSEDLGLDSELVVESLKRKRTFLENSGARCIVMPCHISHLWYED 180

Query: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240
           VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE
Sbjct: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240

Query: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPL 300
           VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKD+LPL
Sbjct: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDILPL 300

Query: 301 DDPLLKRCIDPMDALARSTINWAQCAE 326
           DDPLLKRCIDPMDALARSTINWAQCAE
Sbjct: 301 DDPLLKRCIDPMDALARSTINWAQCAE 327

[Close]

BLAST of Lsi07G004770 vs. ExPASy TrEMBL
Match: A0A6J1IUZ5 (uncharacterized protein LOC111479549 OS=Cucurbita maxima OX=3661 GN=LOC111479549 PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.6e-164
Identity = 299/326 (91.72%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAV-PPSTLLHTDESEHFPESKKSSGFSSV 60
           MSFQLLS+QSC+SAYV TRR QL+WRLNPVQA+ PPSTLLHTDESE+ PESKK SGF SV
Sbjct: 3   MSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYRPESKKGSGFKSV 62

Query: 61  LKTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGESGFPFVLCSDPTLSK 120
           LKT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGESG PFVLCSDPTL  
Sbjct: 63  LKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLGN 122

Query: 121 ELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDV 180
           ELQVFD+SSH VLN KSEDLGLDSG +VESLKSKR FLE SGARCIVMPC ISHLWYEDV
Sbjct: 123 ELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYEDV 182

Query: 181 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 240
           SKGCPVTFLHMADCVAREL+EAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV
Sbjct: 183 SKGCPVTFLHMADCVARELREAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 242

Query: 241 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 300
           VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD
Sbjct: 243 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 302

Query: 301 DPLLKRCIDPMDALARSTINWAQCAE 326
           DPLLK+CIDPMDALARSTINWAQCA+
Sbjct: 303 DPLLKKCIDPMDALARSTINWAQCAK 328

[Close]

BLAST of Lsi07G004770 vs. ExPASy TrEMBL
Match: A0A5A7TNI1 (Putative amino-acid racemase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001620 PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.6e-164
Identity = 303/322 (94.10%), Postives = 308/322 (95.65%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAVPPSTLLHTDESEHFPESKKSSGFSSVL 60
           M+FQLLSSQSCISAYVNTRR QLQWRLNPVQA+PPSTLLHTDESEHFPESKK+SGFSSVL
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPPSTLLHTDESEHFPESKKTSGFSSVL 60

Query: 61  KTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGE--SGFPFVLCSDPTLS 120
           KT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGE  SG PFVLCSDPTLS
Sbjct: 61  KTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTLS 120

Query: 121 KELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYED 180
            ELQVFD+SSHPVLN KSEDLGLDS LVVESLK KR FLENSGARCIVMPC ISHLWYED
Sbjct: 121 NELQVFDKSSHPVLNYKSEDLGLDSELVVESLKRKRTFLENSGARCIVMPCHISHLWYED 180

Query: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240
           VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE
Sbjct: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240

Query: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPL 300
           VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKD+LPL
Sbjct: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDILPL 300

Query: 301 DDPLLKRCIDPMDALA-RSTIN 320
           DDPLLKRCIDPMDALA R TIN
Sbjct: 301 DDPLLKRCIDPMDALARRKTIN 322

[Close]

BLAST of Lsi07G004770 vs. ExPASy TrEMBL
Match: A0A6J1GXT9 (uncharacterized protein LOC111457829 OS=Cucurbita moschata OX=3662 GN=LOC111457829 PE=3 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.2e-164
Identity = 299/326 (91.72%), Postives = 308/326 (94.48%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAV-PPSTLLHTDESEHFPESKKSSGFSSV 60
           MSFQLLS+QSC+SAYV TRR QL+WRLNPVQA+ PPSTLLHTDESE+ PESKK SGF SV
Sbjct: 3   MSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFKSV 62

Query: 61  LKTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGESGFPFVLCSDPTLSK 120
           LKT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGESG PFVLCSDPTL  
Sbjct: 63  LKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLGN 122

Query: 121 ELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDV 180
           ELQVFD+SSH VLN KSE+LGLDSG +VESLKSKR  LE SGARCIVMPC ISHLWYEDV
Sbjct: 123 ELQVFDKSSHQVLNYKSENLGLDSGPLVESLKSKRDLLEKSGARCIVMPCHISHLWYEDV 182

Query: 181 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 240
           SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV
Sbjct: 183 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 242

Query: 241 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 300
           VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD
Sbjct: 243 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 302

Query: 301 DPLLKRCIDPMDALARSTINWAQCAE 326
           DPLLKRCIDPMDALARSTINWAQCA+
Sbjct: 303 DPLLKRCIDPMDALARSTINWAQCAK 328

[Close]

BLAST of Lsi07G004770 vs. NCBI nr
Match: XP_004152211.1 (uncharacterized protein LOC101217164 [Cucumis sativus] >XP_011652967.1 uncharacterized protein LOC101217164 [Cucumis sativus] >KGN52874.1 hypothetical protein Csa_015086 [Cucumis sativus])

HSP 1 Score: 609.0 bits (1569), Expect = 2.4e-170
Identity = 310/327 (94.80%), Postives = 316/327 (96.64%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAVPPSTLLHTDESEHFPESKKSSGFSSVL 60
           M+FQLLSSQSCISAYVNTRR QLQWRLNPVQA+PPSTLLHTDESEHFPESKK+SGFSSVL
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPPSTLLHTDESEHFPESKKTSGFSSVL 60

Query: 61  KTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGE--SGFPFVLCSDPTLS 120
           KT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGE  SG PFVLCSDPTLS
Sbjct: 61  KTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTLS 120

Query: 121 KELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYED 180
            ELQVFD+SSHPVLN KSEDLGLDS LVVESLKSKR FLENSGARCIVMPC ISHLWYED
Sbjct: 121 NELQVFDKSSHPVLNYKSEDLGLDSELVVESLKSKRTFLENSGARCIVMPCHISHLWYED 180

Query: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240
           VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE
Sbjct: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240

Query: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPL 300
           VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKD+LPL
Sbjct: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDILPL 300

Query: 301 DDPLLKRCIDPMDALARSTINWAQCAE 326
           DDPLL+RCIDPMDALARSTINWAQCAE
Sbjct: 301 DDPLLRRCIDPMDALARSTINWAQCAE 327

[Close]

BLAST of Lsi07G004770 vs. NCBI nr
Match: XP_038892083.1 (broad specificity amino-acid racemase RacX [Benincasa hispida])

HSP 1 Score: 608.6 bits (1568), Expect = 3.1e-170
Identity = 312/326 (95.71%), Postives = 316/326 (96.93%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAVPP-STLLHTDESEHFPESKKSSGFSSV 60
           MS QLLSSQSCISAYVNTRR Q QWRLNP+QA+PP STLLHTDESEHFPESKKSSGFSSV
Sbjct: 1   MSCQLLSSQSCISAYVNTRRIQHQWRLNPLQALPPSSTLLHTDESEHFPESKKSSGFSSV 60

Query: 61  LKTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGESGFPFVLCSDPTLSK 120
           LKT KDSTGILLSQSN+VGILGGSSVNSTVNFLGKLVKWSTKDGESG PFVLCSDPTLS 
Sbjct: 61  LKTSKDSTGILLSQSNSVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLSN 120

Query: 121 ELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDV 180
           ELQVFD+SSHPVLN KSEDLGLDS LVVESLKSKRAFLENSGARCIVMPC ISHLWYEDV
Sbjct: 121 ELQVFDKSSHPVLNYKSEDLGLDSRLVVESLKSKRAFLENSGARCIVMPCHISHLWYEDV 180

Query: 181 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 240
           SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV
Sbjct: 181 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 240

Query: 241 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 300
           VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD
Sbjct: 241 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 300

Query: 301 DPLLKRCIDPMDALARSTINWAQCAE 326
           DPLLKRCIDPMDALARSTINWAQCAE
Sbjct: 301 DPLLKRCIDPMDALARSTINWAQCAE 326

[Close]

BLAST of Lsi07G004770 vs. NCBI nr
Match: XP_008454251.1 (PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_008454252.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901533.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901534.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901535.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901536.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901537.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901538.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901539.1 PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_016901540.1 PREDICTED: probable amino-acid racemase [Cucumis melo])

HSP 1 Score: 608.2 bits (1567), Expect = 4.1e-170
Identity = 310/327 (94.80%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAVPPSTLLHTDESEHFPESKKSSGFSSVL 60
           M+FQLLSSQSCISAYVNTRR QLQWRLNPVQA+PPSTLLHTDESEHFPESKK+SGFSSVL
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPPSTLLHTDESEHFPESKKTSGFSSVL 60

Query: 61  KTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGE--SGFPFVLCSDPTLS 120
           KT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGE  SG PFVLCSDPTLS
Sbjct: 61  KTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTLS 120

Query: 121 KELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYED 180
            ELQVFD+SSHPVLN KSEDLGLDS LVVESLK KR FLENSGARCIVMPC ISHLWYED
Sbjct: 121 NELQVFDKSSHPVLNYKSEDLGLDSELVVESLKRKRTFLENSGARCIVMPCHISHLWYED 180

Query: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240
           VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE
Sbjct: 181 VSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFE 240

Query: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPL 300
           VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKD+LPL
Sbjct: 241 VVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDILPL 300

Query: 301 DDPLLKRCIDPMDALARSTINWAQCAE 326
           DDPLLKRCIDPMDALARSTINWAQCAE
Sbjct: 301 DDPLLKRCIDPMDALARSTINWAQCAE 327

[Close]

BLAST of Lsi07G004770 vs. NCBI nr
Match: XP_023528030.1 (uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528032.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528033.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528034.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >KAG7018350.1 hypothetical protein SDJN02_20218 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 590.9 bits (1522), Expect = 6.8e-165
Identity = 301/326 (92.33%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAV-PPSTLLHTDESEHFPESKKSSGFSSV 60
           MSFQLLS+QSC+SAYV TRR QL+WRLNPVQA+ PPSTLLHTDESE+ PESKK SGF SV
Sbjct: 3   MSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFKSV 62

Query: 61  LKTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGESGFPFVLCSDPTLSK 120
           LKT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGESG PFVLCSDPTL  
Sbjct: 63  LKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLGN 122

Query: 121 ELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDV 180
           ELQVFD+SSH VLN KSEDLGLDSG +VESLKSKR FLE SGARCIVMPC ISHLWYEDV
Sbjct: 123 ELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYEDV 182

Query: 181 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 240
           SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV
Sbjct: 183 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 242

Query: 241 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 300
           VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD
Sbjct: 243 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 302

Query: 301 DPLLKRCIDPMDALARSTINWAQCAE 326
           DPLLKRCIDPMDALARSTINWAQCA+
Sbjct: 303 DPLLKRCIDPMDALARSTINWAQCAK 328

[Close]

BLAST of Lsi07G004770 vs. NCBI nr
Match: XP_022980019.1 (uncharacterized protein LOC111479549 [Cucurbita maxima] >XP_022980020.1 uncharacterized protein LOC111479549 [Cucurbita maxima] >XP_022980021.1 uncharacterized protein LOC111479549 [Cucurbita maxima])

HSP 1 Score: 587.4 bits (1513), Expect = 7.5e-164
Identity = 299/326 (91.72%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MSFQLLSSQSCISAYVNTRRSQLQWRLNPVQAV-PPSTLLHTDESEHFPESKKSSGFSSV 60
           MSFQLLS+QSC+SAYV TRR QL+WRLNPVQA+ PPSTLLHTDESE+ PESKK SGF SV
Sbjct: 3   MSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYRPESKKGSGFKSV 62

Query: 61  LKTGKDSTGILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGESGFPFVLCSDPTLSK 120
           LKT KDSTGILLSQSN VGILGGSSVNSTVNFLGKLVKWSTKDGESG PFVLCSDPTL  
Sbjct: 63  LKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLGN 122

Query: 121 ELQVFDRSSHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDV 180
           ELQVFD+SSH VLN KSEDLGLDSG +VESLKSKR FLE SGARCIVMPC ISHLWYEDV
Sbjct: 123 ELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYEDV 182

Query: 181 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 240
           SKGCPVTFLHMADCVAREL+EAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV
Sbjct: 183 SKGCPVTFLHMADCVARELREAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 242

Query: 241 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 300
           VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD
Sbjct: 243 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLD 302

Query: 301 DPLLKRCIDPMDALARSTINWAQCAE 326
           DPLLK+CIDPMDALARSTINWAQCA+
Sbjct: 303 DPLLKKCIDPMDALARSTINWAQCAK 328

[Close]

BLAST of Lsi07G004770 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 364.8 bits (935), Expect = 7.3e-101
Identity = 185/315 (58.73%), Postives = 241/315 (76.51%), Query Frame = 0


Query: 11  CISAYVNTRRSQLQWRLNPVQAVPPST-LLHTDESEHFPESKKSSGFSSVLKTGKDS--T 70
           C S+ V+ R      RL+ V A+PPS+ LLH DES   P+ KK    S   +   +S   
Sbjct: 17  CYSSRVSCR-----VRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPA 76

Query: 71  GILLSQSNAVGILGGSSVNSTVNFLGKLVKWSTKDGESGFPFVLCSDPTLSKELQVFDRS 130
             LL Q+N VGI+GG S +ST+ F+ KLV WS+ DG+S  PFVLCSDP L+KEL +++ +
Sbjct: 77  DSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEEN 136

Query: 131 SHPVLNGKSEDLGLDSGLVVESLKSKRAFLENSGARCIVMPCQISHLWYEDVSKGCPVTF 190
           S+P L  + E   +D  L+VE+L++KR +LE  GA+ I+MPC I+H+WYE+V +G  V  
Sbjct: 137 SYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPL 196

Query: 191 LHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVVLPDKATM 250
           LHM +C+A+EL+EAK+KPLEAG+PLR+GV+AT+A LSAG+YQEKLQ+ GFE VLPDKATM
Sbjct: 197 LHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATM 256

Query: 251 EHTVIPAIEALNRKDIEGARNLLRIALQVLLVRAVNSVILASDDIKDLLPLDDPLLKRCI 310
           EHTVIP+IEA+ RKD+EGARNLLRIALQVLLV+AVN V+L SD+++DLLP DDPLLK+C+
Sbjct: 257 EHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCV 316

Query: 311 DPMDALARSTINWAQ 323
           DPMDALARS I WA+
Sbjct: 317 DPMDALARSAIKWAE 326

The following BLAST results are available for this feature:

BLAST of Lsi07G004770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O58403	1.9e-13	25.20	Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JC...	[more]
P32968	9.3e-08	26.53	Uncharacterized protein in pnlA 3'region (Fragment) OS=Pectobacterium carotovoru...	[more]
P32960	6.7e-06	21.34	Broad specificity amino-acid racemase RacX OS=Bacillus subtilis (strain 168) OX=...	[more]

BLAST of Lsi07G004770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVD7	1.2e-170	94.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004850 PE=3 SV=1	[more]
A0A1S4E0P1	2.0e-170	94.80	probable amino-acid racemase OS=Cucumis melo OX=3656 GN=LOC103494713 PE=3 SV=1	[more]
A0A6J1IUZ5	3.6e-164	91.72	uncharacterized protein LOC111479549 OS=Cucurbita maxima OX=3661 GN=LOC111479549...	[more]
A0A5A7TNI1	3.6e-164	94.10	Putative amino-acid racemase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1GXT9	6.2e-164	91.72	uncharacterized protein LOC111457829 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]

BLAST of Lsi07G004770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152211.1	2.4e-170	94.80	uncharacterized protein LOC101217164 [Cucumis sativus] >XP_011652967.1 uncharact...	[more]
XP_038892083.1	3.1e-170	95.71	broad specificity amino-acid racemase RacX [Benincasa hispida]	[more]
XP_008454251.1	4.1e-170	94.80	PREDICTED: probable amino-acid racemase [Cucumis melo] >XP_008454252.1 PREDICTED...	[more]
XP_023528030.1	6.8e-165	92.33	uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528032....	[more]
XP_022980019.1	7.5e-164	91.72	uncharacterized protein LOC111479549 [Cucurbita maxima] >XP_022980020.1 uncharac...	[more]

BLAST of Lsi07G004770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15410.1	7.3e-101	58.73	aspartate-glutamate racemase family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1860		coord: 192..309 e-value: 9.2E-45 score: 155.1
None	No IPR available	GENE3D	3.40.50.1860		coord: 77..315 e-value: 9.2E-45 score: 155.1
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 6..324
IPR015942	Asp/Glu/hydantoin racemase	PFAM	PF01177	Asp_Glu_race	coord: 80..316 e-value: 8.4E-24 score: 84.6
IPR004380	Aspartate racemase	PANTHER	PTHR21198:SF7	ASPARTATE-GLUTAMATE RACEMASE FAMILY	coord: 6..324
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 77..200
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 213..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G004770.1	Lsi07G004770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
molecular_function	GO:0047661	amino-acid racemase activity
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives