Lsi07G003580 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G003580
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Peroxin-13
Location	chr07: 3810451 .. 3814811 (-)
RNA-Seq Expression	Lsi07G003580
Synteny	Lsi07G003580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAAAGTTCAATGACTTAAAAAGATTAGGTGAGAGAGTCCAATAATAGGAGGATAGGATAGGAACGATTTCCTCATTCCATTGGATTTAAAAATATATATATTAATTGAATCTATCGATCTCCTAAAAGGAAAAAAAAAGTTTTGAAGCGGAATTTGGAGGATGAGATCGACTTGGATGCGGATCCTTCTTGGCAACAATATTTGCCCATAAGCTGACACTTTCCCTTATTGTTGTTCCCGAACCTTGAGAGAGAGAGAGAGATTCTTGATCTCTCCCAATTTCTGATGCAATTTCTCACCGATTTCCATGGATTCTAAGCCTTCTCAGCCTGCAGGTTTGCCAGATTCAACCCTATCTCCCACCCCCTCTTTTTCTTTGAGGTCGTCTTGTGCTTATCTTTTTCTCTGCTTGGACTCTTGATTTCTTGTGGATTATATTTTGGGTTTTGGAATTTGATGCGCTACTTATGGCTAATTGGGTTCACGAAATAGATATCAGTGTTTTAATCGCGTACCCTTTTGTTCTTGGGTGATAAAACCCTAGTTTTGATTGTAATTTCGTTGATTCTCTTTGTTTGTTTTGGGTTTGTATTTTCTTGTTGGTTTGTATTTCAATGAATGGAAGAATTAGGTCCTGGTAGATTGTTTTCATATGGAGTAAGAGTACAGTTGATTCTGTAAAAAGATGAGATTGGATGAACTATTGATGGATTTCTAGTGTATATGTTGATGCTTCCCCCCCTCGGGTTTAATATTCAAGATTATGATCTGAATCAATCATGATTTAGACCCTAAGAGAAGGGGGAAAATTATCTTGCCTCTAAATGCAGCTGTTTCTACCGTCAGTAAATTTTGTTTCTGTTGGATAATCACGAAAATCTGTTTGCTTTAAAATTCCTTTTTATTTTTCACTTGCTGATTTGTGATGGCCGTACAATTCATATTGCAGCTTCTAATCCTCCACCAAAACCTTGGGAACGAGTAGGGGGATCATCGGGTTCAGCACCTTTTAGACCCCCATCAGCTGGCAATACAAGTGAGGTAGTAGAGGCTTCTGGGACTGCAAAACCTGGAGAAATTGTTTCTGGTTCTGATAGGACTGCTGCTATTAATAGGAACTCACTTGGCCGGCCTGTTCCAACAAGGCCTTGGGAGCAAAACTATGGGAATAACAGCTATGGAGGAGGTTATGATTTAAATGTCTCTTTGCGACTGATGTATGCTTTCCCATGTGATATTCTTCCTTGGATGCTCATGTTATTTCTTGTTTTTATTACTGCAGCTTATGGTTCAACTATGAATAATTCTCTTTACGGTTCTGGGATGTATGGTTCTTCTTCTTATGGTGGAGGTTTGTATGGGGGTGGAATGTATGGGAACAGCATGTATAGATCAGGAGGTTATGGTGGGCTTTATGGATCTTCTGGTATGTATGGAAATAGTGGTATGTATGGAGGTGGAATGTATAATAGTGGCCTTGGAGGTCCAATGGGTGGCTATGGAATGGGCATGGGTGGTCCTTATGGTGGTCAAGATCCAAATGACCCTTATGGTCCTCCTTCATCTCCTCCAGGATTTTGGATGTCATTTCTGCGAGTGGTAAGCGATTTACTTATCTCTGTTATCAGCACTATTGTTCTTTTATTTTTGGTTCGGGTGAATGGACAGGGCTGTAAGGTTTGCTTAGCTTAAGTTATCGTTATCTATTGTTCTGATGTTTGTTACCTCAGTATATATCTTCGTTTTTGTCAAGTTGACTTAGTCTTTAATAAAGCCATGGATCGGTTTTTGTTCAAGGCAATACTGTTTTTTCAAGTATTAATTTCTTATATTGTGCTTTATTCTTTTGAAAGTGTTTATTTTTGTCTAATTACTTCTTAAAAAAGTTTCAATGACTTTAAGATTCAAGGTTGAGTTGATAATTTCTGGGTATCCTATGCCACCTCGAGGATAATATGTATTTGAAGTTAAAAAGATATGTTCCCTGTAATTCACTGTGGACAGGGTTAAGAAACAAATACGATGGTCCTTATCTGTATCTATCTATTTTGTAATTCTGATTGCAATTACCTGAGGTTCTTGTTTCAACTCCTGAATCCTCGCCTTTTTATTTCTGTGCAGATGCATGGTGTTGTGAACTTCTTTGGTCGAATATCTATTCTTATTGACCAAAACACACAGGCGTTCCATATGTTCATGACTGCACTACTTCAGGTGTGCTTGTGCTCTATTAACTTACTACCACCCCTACTTTAGAAATGTTTCATAGATTGTGCTGACTAACAATGAATCCTTTTTCCCCCCTTGATGAGAGAATGACTCCCCTATTTAAGATTTACCAACTTAAAACGTACAGACTATAAAAGCAACAGTAATGGTAGATGTTACATTTTCTAAGTGGTGGTTTGAAAGTGAAAACGGGAATTTAAATCTACATTAATGATAGGTGTTTAATTTTCAAAGTGGTCACGTAAAAGTTAAAATTGGAATTTAAATCCAACTTTAATTTTTTTTTTTTTTTTTTTGAAAAAACTCAAATCTCAACAGCCGTTACAGTTCCTTGTAGTTGCTTCACATAAAAAACTTCTGGATATGACCTTGCTGAATTTTCCCTGGCGTATGTGATTGTTCTTTTGTTTTTCCCCCTTCCCTTCCAAGATCCCAAACTAGGAGGCTCGAACAGAAGAAACATTTTGGTAGCCTACACCGTTTTTTGGTAAGGAATGTTTTTGTTTTGGATAACAAACATGACATTTCACTTGATCTGTGAAATATAGAAAAGAAAGGGGATAGAAAGCCACACAGCAAAAGAAGCCTGCCAGAAAGCCCCTCCAATTAGCCAAAATGTTCGACGTCTGTCTAAGAAACACTGATATGACAAGACACGACGATACACTAATTTAAAAAAACTAGGACATGAGCATGTTGGAAAGATGCTATTTTTTAAATTATTTTTCAAGGATATAGATAAATTTAACATCAAATACCAAATGTGCTCCACTAAAAAAAGCATAAAAGGTCAAGTTAATTAACAACTGTAGGAGAGATGAAACGTGTAGGTTTTTTGTTTTAGTATTTTATCTTTGATTAAAATATTTTTGTTTTTAATCTTTGTTTAACATATAATTGATTTGGGCTGTAAATTTGGGTCCAACATAAAAGGTCGGATCATTTTCTCTTTAAAATATTTTTCCAGGCATGTCCATGAAGTGTCCGGACTGTGTCCCACATGTCTGTAAGTAAAAAAAAAATAGGACACTAAATTTTGTTTGTTGGAGCTGTGTCCATGTTTCCTAGATGTCCGTAATATTGTAATTACAAAATGATTTACTAATCCTACTCCAAGAAGCTGGAAGCTGTAACAAAAAGTACCTGAAAATTGTAATTCTGACTTTGTAATTAGATAGCTGCTACCTTGAGATGTAGATGATGTAGTTATATAAGTTTAGTTTAGTTTAGTGTTTTTTGTTTTTTTTTTTTCAAATTAAGAAATCGACATCTACTCACTACTTTATGATTGCATTATTCCTGTGACAGCTTTTTGACCGCTCCGGTATGTTATATGGAGAGCTTGCTAGATTTGTCTTGAGACTACTTGGAATTAAAACCAAACCTAGGAATGTTCAGAATGTAGGCCCTGATGGGCTTCCTCTTCCTGGAGCCCCCCATCCTCATCAAGGCCAGAGCTTGATCGGGGGACCGAAGGCCGCTCCTGATGGTACTTGGGATAATGTTTGGCCTAATGGTTCCCAGTAAATGAACAATTTTACTTAATATTTGAAGGTAACAAAGCTTCATTTCTTCCTTCATAGTAAATATCTTGAAGAAATTACAATCTCTGCAGCTTGCCATGTTCGATTCTTTCATTGCAGGTGTACTCAAAACAAGAAGGATACTGGAAGATCTTGATAGGACAGAGAACTGAGATGTGATCCCAAGCTTGTATTTAGCAGGATTGACCTCAGGGTCGGCTATGGCTTCGGTTGGTGTTCTTCATTCTGGAATCTGAGAAGACCATAATATGAAATAGTGAATTAAGCTGTCTTTGACCTGAAATACAAGTTTGTTTTTCTGGTTCTTTGGGTGGTTAAGTTTAGTATTATTATTTTTTTGTGGTGTATGATTGATGGTGAATAAAAGGAAAAAATGACTTATTGAAAGTGATCATATTCTAAATCTAATTTTTATTTATAAAGTTTATTTTTATTTATAAAGTTTTTTTTCCTAACAACTGAGTAATGTAATTCAAACAGAGTCGCCTGCCATTCAATGACTTGTTACTTAGTAGACTAATTGATCACATTGGATTGGCATATACTTGACATTAGAGATTGTGGAATTTTAAGAGGTTATTGCTA

mRNA sequence

CCAAAAAGTTCAATGACTTAAAAAGATTAGGTGAGAGAGTCCAATAATAGGAGGATAGGATAGGAACGATTTCCTCATTCCATTGGATTTAAAAATATATATATTAATTGAATCTATCGATCTCCTAAAAGGAAAAAAAAAGTTTTGAAGCGGAATTTGGAGGATGAGATCGACTTGGATGCGGATCCTTCTTGGCAACAATATTTGCCCATAAGCTGACACTTTCCCTTATTGTTGTTCCCGAACCTTGAGAGAGAGAGAGAGATTCTTGATCTCTCCCAATTTCTGATGCAATTTCTCACCGATTTCCATGGATTCTAAGCCTTCTCAGCCTGCAGCTTCTAATCCTCCACCAAAACCTTGGGAACGAGTAGGGGGATCATCGGGTTCAGCACCTTTTAGACCCCCATCAGCTGGCAATACAAGTGAGGTAGTAGAGGCTTCTGGGACTGCAAAACCTGGAGAAATTGTTTCTGGTTCTGATAGGACTGCTGCTATTAATAGGAACTCACTTGGCCGGCCTGTTCCAACAAGGCCTTGGGAGCAAAACTATGGGAATAACAGCTATGGAGGAGCTTATGGTTCAACTATGAATAATTCTCTTTACGGTTCTGGGATGTATGGTTCTTCTTCTTATGGTGGAGGTTTGTATGGGGGTGGAATGTATGGGAACAGCATGTATAGATCAGGAGGTTATGGTGGGCTTTATGGATCTTCTGGTATGTATGGAAATAGTGGTATGTATGGAGGTGGAATGTATAATAGTGGCCTTGGAGGTCCAATGGGTGGCTATGGAATGGGCATGGGTGGTCCTTATGGTGGTCAAGATCCAAATGACCCTTATGGTCCTCCTTCATCTCCTCCAGGATTTTGGATGTCATTTCTGCGAGTGATGCATGGTGTTGTGAACTTCTTTGGTCGAATATCTATTCTTATTGACCAAAACACACAGGCGTTCCATATGTTCATGACTGCACTACTTCAGCTTTTTGACCGCTCCGGTATGTTATATGGAGAGCTTGCTAGATTTGTCTTGAGACTACTTGGAATTAAAACCAAACCTAGGAATGTTCAGAATGTAGGCCCTGATGGGCTTCCTCTTCCTGGAGCCCCCCATCCTCATCAAGGCCAGAGCTTGATCGGGGGACCGAAGGCCGCTCCTGATGGTACTTGGGATAATGTTTGGCCTAATGGTTCCCAGTAAATGAACAATTTTACTTAATATTTGAAGGTGTACTCAAAACAAGAAGGATACTGGAAGATCTTGATAGGACAGAGAACTGAGATGTGATCCCAAGCTTGTATTTAGCAGGATTGACCTCAGGGTCGGCTATGGCTTCGGTTGGTGTTCTTCATTCTGGAATCTGAGAAGACCATAATATGAAATAGTGAATTAAGCTGTCTTTGACCTGAAATACAAGTTTGTTTTTCTGGTTCTTTGGGTGGTTAAGTTTAGTATTATTATTTTTTTGTGGTGTATGATTGATGGTGAATAAAAGGAAAAAATGACTTATTGAAAGTGATCATATTCTAAATCTAATTTTTATTTATAAAGTTTATTTTTATTTATAAAGTTTTTTTTCCTAACAACTGAGTAATGTAATTCAAACAGAGTCGCCTGCCATTCAATGACTTGTTACTTAGTAGACTAATTGATCACATTGGATTGGCATATACTTGACATTAGAGATTGTGGAATTTTAAGAGGTTATTGCTA

Coding sequence (CDS)

ATGGATTCTAAGCCTTCTCAGCCTGCAGCTTCTAATCCTCCACCAAAACCTTGGGAACGAGTAGGGGGATCATCGGGTTCAGCACCTTTTAGACCCCCATCAGCTGGCAATACAAGTGAGGTAGTAGAGGCTTCTGGGACTGCAAAACCTGGAGAAATTGTTTCTGGTTCTGATAGGACTGCTGCTATTAATAGGAACTCACTTGGCCGGCCTGTTCCAACAAGGCCTTGGGAGCAAAACTATGGGAATAACAGCTATGGAGGAGCTTATGGTTCAACTATGAATAATTCTCTTTACGGTTCTGGGATGTATGGTTCTTCTTCTTATGGTGGAGGTTTGTATGGGGGTGGAATGTATGGGAACAGCATGTATAGATCAGGAGGTTATGGTGGGCTTTATGGATCTTCTGGTATGTATGGAAATAGTGGTATGTATGGAGGTGGAATGTATAATAGTGGCCTTGGAGGTCCAATGGGTGGCTATGGAATGGGCATGGGTGGTCCTTATGGTGGTCAAGATCCAAATGACCCTTATGGTCCTCCTTCATCTCCTCCAGGATTTTGGATGTCATTTCTGCGAGTGATGCATGGTGTTGTGAACTTCTTTGGTCGAATATCTATTCTTATTGACCAAAACACACAGGCGTTCCATATGTTCATGACTGCACTACTTCAGCTTTTTGACCGCTCCGGTATGTTATATGGAGAGCTTGCTAGATTTGTCTTGAGACTACTTGGAATTAAAACCAAACCTAGGAATGTTCAGAATGTAGGCCCTGATGGGCTTCCTCTTCCTGGAGCCCCCCATCCTCATCAAGGCCAGAGCTTGATCGGGGGACCGAAGGCCGCTCCTGATGGTACTTGGGATAATGTTTGGCCTAATGGTTCCCAGTAA

Protein sequence

MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRTAAINRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMYGNSMYRSGGYGGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELARFVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGSQ

Homology

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BLAST of Lsi07G003580 vs. ExPASy Swiss-Prot
Match: Q9SRR0 (Peroxisomal membrane protein 13 OS=Arabidopsis thaliana OX=3702 GN=PEX13 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.8e-82
Identity = 193/305 (63.28%), Postives = 220/305 (72.13%), Query Frame = 0


Query: 6   SQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSG--SDRTAAI 65
           SQPA  + PPKPWE+ G +SG  PFRPPS  +T+  VEASGTA PGE+V    +    A 
Sbjct: 3   SQPAGGS-PPKPWEKEGNTSGPNPFRPPSNTSTAGSVEASGTANPGEVVPPPVNRPNTAA 62

Query: 66  NRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMN-NSLYGSGMYGSSSYG-GGLYGGGMY-G 125
           N NSL RPVP RPWEQ    ++ GG YGS +   S YGSG YGS+  G G  YGGGMY G
Sbjct: 63  NMNSLSRPVPARPWEQQNYGSTMGGGYGSNLGMTSGYGSGTYGSALGGYGSSYGGGMYGG 122

Query: 126 NSMYRSG-GYGGLYGSSGMYGNSGM--YGG--GMYNSGLGGPMG-GYGMGMGGPYGGQDP 185
           +SMYR G G GGLYGSSGMYG   M  YGG  G Y  G+G  MG G GMGMGGPYG QDP
Sbjct: 123 SSMYRGGYGGGGLYGSSGMYGGGAMGGYGGTMGGYGMGMGTGMGMGMGMGMGGPYGSQDP 182

Query: 186 NDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLY 245
           NDP+  P SPPGFW+SFLRVM G VNFFGR+++LIDQNTQAFHMFM+ALLQLFDR GMLY
Sbjct: 183 NDPFNQPPSPPGFWISFLRVMQGAVNFFGRVAMLIDQNTQAFHMFMSALLQLFDRGGMLY 242

Query: 246 GELARFVLRLLGIKTKPRNVQN--VGPDGLPLPGAPHPHQGQSLIGGPK-AAP--DGTWD 295
           GELARFVLR+LG++T+PR +Q    GP+GLPLP    PH  Q+ + GPK AAP   G WD
Sbjct: 243 GELARFVLRMLGVRTRPRKMQQPPQGPNGLPLP--HQPHGNQNYLEGPKTAAPGGGGGWD 302

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BLAST of Lsi07G003580 vs. ExPASy Swiss-Prot
Match: Q54CL3 (Probable peroxisomal membrane protein PEX13 OS=Dictyostelium discoideum OX=44689 GN=pex13 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.4e-12
Identity = 93/261 (35.63%), Postives = 120/261 (45.98%), Query Frame = 0


Query: 14  PPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRTAAINR-----NSL 73
           PPKPWE   G  GS      S G +  +     T  PG   S + +T+ +N       S+
Sbjct: 5   PPKPWENNSGGGGSTSM-TGSGGISRPMSGPQRTTSPGGGSSTTTQTSTLNNTGSPSTSV 64

Query: 74  GRPV------PTRPWE---------QNYG---------NNSYGGAYGSTMNNSLYGSGMY 133
           G P+      P RPWE          ++G          +SYGG Y  + ++  YGS  Y
Sbjct: 65  GGPLVTRPRTPMRPWESGGAGSSSIDSFGGGVGGSSGYRSSYGGGYRDSYSSGGYGSSGY 124

Query: 134 GSS--SYGGGLYGGGMYGNSMYRSGGYGGL-YGSS--GMYGNS------GMYGGGMYNSG 193
           GSS  S G G YG  +YG   Y SGGYGG  YGSS  G YG+S        YGG  Y S 
Sbjct: 125 GSSYGSGGSGGYGSSLYGGGGYSSGGYGGSGYGSSYGGGYGSSYGSGYGSSYGGSGYGSS 184

Query: 194 LGGPM-----GGYGMGMGGPYG--GQDPNDPYGPP-SSPPGFWMSFLRVMHGVVNFFGRI 227
            GG       GGYG G GG YG  G D  D  G    S      S++  +H +V+ F R 
Sbjct: 185 YGGGYGSSYGGGYGGGYGGGYGQRGYDNMDGKGGALQSVVSSGHSWMEALHSIVDTFSRF 244

[Close]

BLAST of Lsi07G003580 vs. ExPASy Swiss-Prot
Match: Q92266 (Peroxisomal membrane protein PEX13 OS=Komagataella pastoris OX=4922 GN=PEX13 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 7.4e-04
Identity = 37/72 (51.39%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 81  YGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMYGNSMYRSGGYGGLYGSSGMYG 140
           YG NSYG +YG    +S+YGSG YG   YG  +YGG  YG   Y  GGYG   G  GM  
Sbjct: 46  YG-NSYGSSYGGGYGSSMYGSGGYGMGGYGSSMYGGSRYGMGSYGMGGYG--MGGYGMGM 105

Query: 141 NSGMYGGGMYNS 153
           N+GM G GM  S
Sbjct: 106 NTGMNGMGMAGS 114

[Close]

BLAST of Lsi07G003580 vs. ExPASy TrEMBL
Match: A0A1S4DZY4 (Peroxin-13 OS=Cucumis melo OX=3656 GN=LOC103494610 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 6.9e-154
Identity = 283/298 (94.97%), Postives = 289/298 (96.98%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QP+ASNPPPKPWERVGGSSGSAPFRPPSAGNTS+VVEASGTAKPGEIVS SDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERVGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMYG 120
           AA+NRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGG+YGGGMYG
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMYG 120

Query: 121 NSMYRS-GGYGGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDPYG 180
           NSMYRS GGYGGLYGSSGMYGNSGMYGGGMYNSG+GGPMGGYGMGMGGPYGGQDPNDPYG
Sbjct: 121 NSMYRSGGGYGGLYGSSGMYGNSGMYGGGMYNSGIGGPMGGYGMGMGGPYGGQDPNDPYG 180

Query: 181 PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR 240
           PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR
Sbjct: 181 PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR 240

Query: 241 FVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGSQ 298
           FVLRLLGIKTKPR V  VGPDGLPLPG PHPHQGQ+LI GPKAAPDG WDNVWPNGSQ
Sbjct: 241 FVLRLLGIKTKPRKV--VGPDGLPLPGPPHPHQGQNLIEGPKAAPDGAWDNVWPNGSQ 296

[Close]

BLAST of Lsi07G003580 vs. ExPASy TrEMBL
Match: A0A5D3D1F0 (Peroxin-13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G002070 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 9.0e-154
Identity = 283/297 (95.29%), Postives = 289/297 (97.31%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QP+ASNPPPKPWERVGGSSGSAPFRPPSAGNTS+VVEASGTAKPGEIVS SDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERVGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMYG 120
           AA+NRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGG+YGGGMYG
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMYG 120

Query: 121 NSMYRS-GGYGGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDPYG 180
           NSMYRS GGYGGLYGSSGMYGNSGMYGGGMYNSG+GGPMGGYGMGMGGPYGGQDPNDPYG
Sbjct: 121 NSMYRSGGGYGGLYGSSGMYGNSGMYGGGMYNSGIGGPMGGYGMGMGGPYGGQDPNDPYG 180

Query: 181 PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR 240
           PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR
Sbjct: 181 PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR 240

Query: 241 FVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGS 297
           FVLRLLGIKTKPR V  VGPDGLPLPGAPHPHQGQ+LI GPKAAPDG WDNVWPNGS
Sbjct: 241 FVLRLLGIKTKPRKV--VGPDGLPLPGAPHPHQGQNLIEGPKAAPDGAWDNVWPNGS 295

[Close]

BLAST of Lsi07G003580 vs. ExPASy TrEMBL
Match: A0A0A0KYV0 (Peroxin-13 OS=Cucumis sativus OX=3659 GN=Csa_4G010950 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.9e-149
Identity = 279/300 (93.00%), Postives = 286/300 (95.33%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QP+ASNPPPKPWER GGSSGSAPFRPPSAGNTS+VVEASGTAKPGEIVS SDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSY-GGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMY 120
           AA+NRNSLGRPVPTRPWEQNYGNNSY GGAYGSTMNNSLYGSGMYGSSSYGGG+YGGGMY
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY 120

Query: 121 GN-SMYRSGGY-GGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDP 180
           GN SMYRSGGY GGLYGSSGMYGNSGMYGGGMYNSG GGPMGGYGMGMGGPYGGQDPNDP
Sbjct: 121 GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP 180

Query: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240
           YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL
Sbjct: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240

Query: 241 ARFVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGSQ 298
           ARFVLRLLGIKTKPR V  +GPDGLP+PGAPHPHQ Q+LI GPK APDG WDNVWPNGSQ
Sbjct: 241 ARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ 298

[Close]

BLAST of Lsi07G003580 vs. ExPASy TrEMBL
Match: A0A6J1GV89 (Peroxin-13 OS=Cucurbita moschata OX=3662 GN=LOC111457856 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 9.1e-146
Identity = 279/301 (92.69%), Postives = 284/301 (94.35%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QPAASNPPPKPWERVGGSSG APFRPPSAGNTS+VVEASGTAKPGEIVS SD T
Sbjct: 1   MDSKP-QPAASNPPPKPWERVGGSSGPAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDST 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSY--GGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGM 120
           AAINRNSLGRPVPTRPWEQNYGN SY  GGAYGSTMNNSLYGSGMYGSSSYGGG+YGGGM
Sbjct: 61  AAINRNSLGRPVPTRPWEQNYGNTSYGGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGM 120

Query: 121 YG-NSMYRSGGYGGLYGSSGMYGNSGMYGGGMYNS-GLGGPMGGYGMGMGGPYGGQDPND 180
           YG NSMYR GGYGGLYGSSGMYG+ GMYGGGMYNS GLGGPMGGYGMGMGGPYGGQDPND
Sbjct: 121 YGNNSMYR-GGYGGLYGSSGMYGSGGMYGGGMYNSGGLGGPMGGYGMGMGGPYGGQDPND 180

Query: 181 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 240
           PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE
Sbjct: 181 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 240

Query: 241 LARFVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGS 298
           LARFVLRLLGIKTKPR VQNVGPDGLPLPGAPHPHQGQ+ I GPKA+PD  WDNVW NGS
Sbjct: 241 LARFVLRLLGIKTKPRKVQNVGPDGLPLPGAPHPHQGQNSIEGPKASPDVPWDNVWGNGS 299

[Close]

BLAST of Lsi07G003580 vs. ExPASy TrEMBL
Match: A0A6J1IW92 (Peroxin-13 OS=Cucurbita maxima OX=3661 GN=LOC111479052 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.3e-144
Identity = 277/301 (92.03%), Postives = 283/301 (94.02%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QPAASNPPPKPWERVGGSSG APFRPPSAGNTS+VVEASGTAKPGEIVS SD +
Sbjct: 1   MDSKP-QPAASNPPPKPWERVGGSSGPAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDSS 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSY--GGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGM 120
           AAINRNSLGRPVPTRPWEQNYGN SY  GGAYGSTMNNSLY SGMYGSSSYGGG+YGGGM
Sbjct: 61  AAINRNSLGRPVPTRPWEQNYGNTSYGGGGAYGSTMNNSLYSSGMYGSSSYGGGMYGGGM 120

Query: 121 YG-NSMYRSGGYGGLYGSSGMYGNSGMYGGGMYNS-GLGGPMGGYGMGMGGPYGGQDPND 180
           YG NSMYR GGYGGLYGSSGMYG+ GMYGGGMYNS GLGGPMGGYGMGMGGPYGGQDPND
Sbjct: 121 YGNNSMYR-GGYGGLYGSSGMYGSGGMYGGGMYNSGGLGGPMGGYGMGMGGPYGGQDPND 180

Query: 181 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 240
           PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE
Sbjct: 181 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 240

Query: 241 LARFVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGS 298
           LARFVLRLLGIKTKPR VQNVGPDGLPLPGAPHPHQGQ+ I GPKA+PD  WDNVW NGS
Sbjct: 241 LARFVLRLLGIKTKPRKVQNVGPDGLPLPGAPHPHQGQNSIEGPKASPDVPWDNVWGNGS 299

[Close]

BLAST of Lsi07G003580 vs. NCBI nr
Match: XP_016901552.1 (PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein 13 [Cucumis melo])

HSP 1 Score: 553.1 bits (1424), Expect = 1.4e-153
Identity = 283/298 (94.97%), Postives = 289/298 (96.98%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QP+ASNPPPKPWERVGGSSGSAPFRPPSAGNTS+VVEASGTAKPGEIVS SDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERVGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMYG 120
           AA+NRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGG+YGGGMYG
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMYG 120

Query: 121 NSMYRS-GGYGGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDPYG 180
           NSMYRS GGYGGLYGSSGMYGNSGMYGGGMYNSG+GGPMGGYGMGMGGPYGGQDPNDPYG
Sbjct: 121 NSMYRSGGGYGGLYGSSGMYGNSGMYGGGMYNSGIGGPMGGYGMGMGGPYGGQDPNDPYG 180

Query: 181 PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR 240
           PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR
Sbjct: 181 PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR 240

Query: 241 FVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGSQ 298
           FVLRLLGIKTKPR V  VGPDGLPLPG PHPHQGQ+LI GPKAAPDG WDNVWPNGSQ
Sbjct: 241 FVLRLLGIKTKPRKV--VGPDGLPLPGPPHPHQGQNLIEGPKAAPDGAWDNVWPNGSQ 296

[Close]

BLAST of Lsi07G003580 vs. NCBI nr
Match: KAA0044529.1 (peroxisomal membrane protein 13 [Cucumis melo var. makuwa] >TYK17054.1 peroxisomal membrane protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 552.7 bits (1423), Expect = 1.9e-153
Identity = 283/297 (95.29%), Postives = 289/297 (97.31%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QP+ASNPPPKPWERVGGSSGSAPFRPPSAGNTS+VVEASGTAKPGEIVS SDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERVGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMYG 120
           AA+NRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGG+YGGGMYG
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMYG 120

Query: 121 NSMYRS-GGYGGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDPYG 180
           NSMYRS GGYGGLYGSSGMYGNSGMYGGGMYNSG+GGPMGGYGMGMGGPYGGQDPNDPYG
Sbjct: 121 NSMYRSGGGYGGLYGSSGMYGNSGMYGGGMYNSGIGGPMGGYGMGMGGPYGGQDPNDPYG 180

Query: 181 PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR 240
           PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR
Sbjct: 181 PPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELAR 240

Query: 241 FVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGS 297
           FVLRLLGIKTKPR V  VGPDGLPLPGAPHPHQGQ+LI GPKAAPDG WDNVWPNGS
Sbjct: 241 FVLRLLGIKTKPRKV--VGPDGLPLPGAPHPHQGQNLIEGPKAAPDGAWDNVWPNGS 295

[Close]

BLAST of Lsi07G003580 vs. NCBI nr
Match: XP_038877301.1 (peroxisomal membrane protein 13 [Benincasa hispida])

HSP 1 Score: 551.6 bits (1420), Expect = 4.2e-153
Identity = 285/299 (95.32%), Postives = 291/299 (97.32%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QPAASNPPPKPWERVGGSSGSAPFRPPSAGNTS+VVEASGTAKPGEIVS SDRT
Sbjct: 1   MDSKPPQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSTSDRT 60

Query: 61  AAINRNSLGRPVPTRPWEQNYG-NNSYGGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMY 120
           AA+NRNSLGRPVPTRPWEQNYG NNSYGGAYGSTMNNSLYGSGMYG SSYGGG+YGGGMY
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNNSYGGAYGSTMNNSLYGSGMYG-SSYGGGMYGGGMY 120

Query: 121 G-NSMYRSGGYGGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDPY 180
           G NSMYR+GGYGGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDPY
Sbjct: 121 GNNSMYRTGGYGGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDPY 180

Query: 181 GPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELA 240
           GPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELA
Sbjct: 181 GPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGELA 240

Query: 241 RFVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGSQ 298
           RFVLRLLGIKTKPR VQ+VGPDGLPLPGAPHPHQGQ+LI GPKAAPDG WDNVWPNGSQ
Sbjct: 241 RFVLRLLGIKTKPRKVQDVGPDGLPLPGAPHPHQGQNLIEGPKAAPDGAWDNVWPNGSQ 298

[Close]

BLAST of Lsi07G003580 vs. NCBI nr
Match: XP_004152142.1 (peroxisomal membrane protein 13 [Cucumis sativus] >KGN52996.1 hypothetical protein Csa_014702 [Cucumis sativus])

HSP 1 Score: 537.3 bits (1383), Expect = 8.1e-149
Identity = 279/300 (93.00%), Postives = 286/300 (95.33%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QP+ASNPPPKPWER GGSSGSAPFRPPSAGNTS+VVEASGTAKPGEIVS SDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSY-GGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGMY 120
           AA+NRNSLGRPVPTRPWEQNYGNNSY GGAYGSTMNNSLYGSGMYGSSSYGGG+YGGGMY
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY 120

Query: 121 GN-SMYRSGGY-GGLYGSSGMYGNSGMYGGGMYNSGLGGPMGGYGMGMGGPYGGQDPNDP 180
           GN SMYRSGGY GGLYGSSGMYGNSGMYGGGMYNSG GGPMGGYGMGMGGPYGGQDPNDP
Sbjct: 121 GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP 180

Query: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240
           YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL
Sbjct: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240

Query: 241 ARFVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGSQ 298
           ARFVLRLLGIKTKPR V  +GPDGLP+PGAPHPHQ Q+LI GPK APDG WDNVWPNGSQ
Sbjct: 241 ARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ 298

[Close]

BLAST of Lsi07G003580 vs. NCBI nr
Match: XP_023528237.1 (peroxisomal membrane protein 13 [Cucurbita pepo subsp. pepo] >XP_023528238.1 peroxisomal membrane protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.7 bits (1358), Expect = 6.4e-146
Identity = 280/301 (93.02%), Postives = 285/301 (94.68%), Query Frame = 0


Query: 1   MDSKPSQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSGSDRT 60
           MDSKP QPAASNPPPKPWERVGGSSG APFRPPSAGNTS+VVEASGTAKPGEIVS SD T
Sbjct: 1   MDSKP-QPAASNPPPKPWERVGGSSGPAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDST 60

Query: 61  AAINRNSLGRPVPTRPWEQNYGNNSY--GGAYGSTMNNSLYGSGMYGSSSYGGGLYGGGM 120
           AAINRNSLGRPVPTRPWEQNYGN SY  GGAYGSTMNNSLYGSGMYGSSSYGGG+YGGGM
Sbjct: 61  AAINRNSLGRPVPTRPWEQNYGNTSYGGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGM 120

Query: 121 YG-NSMYRSGGYGGLYGSSGMYGNSGMYGGGMYNS-GLGGPMGGYGMGMGGPYGGQDPND 180
           YG NSMYR GGYGGLYGSSGMYG+SGMYGGGMYNS GLGGPMGGYGMGMGGPYGGQDPND
Sbjct: 121 YGNNSMYR-GGYGGLYGSSGMYGSSGMYGGGMYNSGGLGGPMGGYGMGMGGPYGGQDPND 180

Query: 181 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 240
           PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE
Sbjct: 181 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 240

Query: 241 LARFVLRLLGIKTKPRNVQNVGPDGLPLPGAPHPHQGQSLIGGPKAAPDGTWDNVWPNGS 298
           LARFVLRLLGIKTKPR VQNVGPDGLPLPGAPHPHQGQ+ I GPKA+PD  WDNVW NGS
Sbjct: 241 LARFVLRLLGIKTKPRKVQNVGPDGLPLPGAPHPHQGQNSIEGPKASPDVPWDNVWGNGS 299

[Close]

BLAST of Lsi07G003580 vs. TAIR 10
Match: AT3G07560.1 (peroxin 13 )

HSP 1 Score: 307.4 bits (786), Expect = 1.3e-83
Identity = 193/305 (63.28%), Postives = 220/305 (72.13%), Query Frame = 0


Query: 6   SQPAASNPPPKPWERVGGSSGSAPFRPPSAGNTSEVVEASGTAKPGEIVSG--SDRTAAI 65
           SQPA  + PPKPWE+ G +SG  PFRPPS  +T+  VEASGTA PGE+V    +    A 
Sbjct: 3   SQPAGGS-PPKPWEKEGNTSGPNPFRPPSNTSTAGSVEASGTANPGEVVPPPVNRPNTAA 62

Query: 66  NRNSLGRPVPTRPWEQNYGNNSYGGAYGSTMN-NSLYGSGMYGSSSYG-GGLYGGGMY-G 125
           N NSL RPVP RPWEQ    ++ GG YGS +   S YGSG YGS+  G G  YGGGMY G
Sbjct: 63  NMNSLSRPVPARPWEQQNYGSTMGGGYGSNLGMTSGYGSGTYGSALGGYGSSYGGGMYGG 122

Query: 126 NSMYRSG-GYGGLYGSSGMYGNSGM--YGG--GMYNSGLGGPMG-GYGMGMGGPYGGQDP 185
           +SMYR G G GGLYGSSGMYG   M  YGG  G Y  G+G  MG G GMGMGGPYG QDP
Sbjct: 123 SSMYRGGYGGGGLYGSSGMYGGGAMGGYGGTMGGYGMGMGTGMGMGMGMGMGGPYGSQDP 182

Query: 186 NDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLY 245
           NDP+  P SPPGFW+SFLRVM G VNFFGR+++LIDQNTQAFHMFM+ALLQLFDR GMLY
Sbjct: 183 NDPFNQPPSPPGFWISFLRVMQGAVNFFGRVAMLIDQNTQAFHMFMSALLQLFDRGGMLY 242

Query: 246 GELARFVLRLLGIKTKPRNVQN--VGPDGLPLPGAPHPHQGQSLIGGPK-AAP--DGTWD 295
           GELARFVLR+LG++T+PR +Q    GP+GLPLP    PH  Q+ + GPK AAP   G WD
Sbjct: 243 GELARFVLRMLGVRTRPRKMQQPPQGPNGLPLP--HQPHGNQNYLEGPKTAAPGGGGGWD 302

The following BLAST results are available for this feature:

BLAST of Lsi07G003580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRR0	1.8e-82	63.28	Peroxisomal membrane protein 13 OS=Arabidopsis thaliana OX=3702 GN=PEX13 PE=1 SV...	[more]
Q54CL3	7.4e-12	35.63	Probable peroxisomal membrane protein PEX13 OS=Dictyostelium discoideum OX=44689...	[more]
Q92266	7.4e-04	51.39	Peroxisomal membrane protein PEX13 OS=Komagataella pastoris OX=4922 GN=PEX13 PE=...	[more]

BLAST of Lsi07G003580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZY4	6.9e-154	94.97	Peroxin-13 OS=Cucumis melo OX=3656 GN=LOC103494610 PE=3 SV=1	[more]
A0A5D3D1F0	9.0e-154	95.29	Peroxin-13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G002070 PE...	[more]
A0A0A0KYV0	3.9e-149	93.00	Peroxin-13 OS=Cucumis sativus OX=3659 GN=Csa_4G010950 PE=3 SV=1	[more]
A0A6J1GV89	9.1e-146	92.69	Peroxin-13 OS=Cucurbita moschata OX=3662 GN=LOC111457856 PE=3 SV=1	[more]
A0A6J1IW92	1.3e-144	92.03	Peroxin-13 OS=Cucurbita maxima OX=3661 GN=LOC111479052 PE=3 SV=1	[more]

BLAST of Lsi07G003580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901552.1	1.4e-153	94.97	PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein 13 [Cucumis melo]	[more]
KAA0044529.1	1.9e-153	95.29	peroxisomal membrane protein 13 [Cucumis melo var. makuwa] >TYK17054.1 peroxisom...	[more]
XP_038877301.1	4.2e-153	95.32	peroxisomal membrane protein 13 [Benincasa hispida]	[more]
XP_004152142.1	8.1e-149	93.00	peroxisomal membrane protein 13 [Cucumis sativus] >KGN52996.1 hypothetical prote...	[more]
XP_023528237.1	6.4e-146	93.02	peroxisomal membrane protein 13 [Cucurbita pepo subsp. pepo] >XP_023528238.1 per...	[more]

BLAST of Lsi07G003580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07560.1	1.3e-83	63.28	peroxin 13	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..297
None	No IPR available	PANTHER	PTHR19332:SF8	PEROXISOMAL MEMBRANE PROTEIN 13	coord: 8..295
IPR035463	Peroxin 13	PANTHER	PTHR19332	PEROXISOMAL MEMBRANE PROTEIN PEX13	coord: 8..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G003580.1	Lsi07G003580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016560	protein import into peroxisome matrix, docking
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:1990429	peroxisomal importomer complex
cellular_component	GO:0005778	peroxisomal membrane
cellular_component	GO:0005777	peroxisome