Lsi07G003190 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G003190
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	polyadenylate-binding protein-interacting protein 12
Location	chr07: 3403039 .. 3408062 (-)
RNA-Seq Expression	Lsi07G003190
Synteny	Lsi07G003190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGGAGGGCATATAAAGAAAAGAAAAGAAGGAAATGCATGATGCATGGTGATTGTTCATTCATGCATGGGGTAATGGGAAGGAGATGGGTATTTTAGGAATTATGAAAAGTTTGTTTGGATGACTGAGTTTGGTGTCCCTGAAATATGTTGAGAGGAAGGGGAAGGGGGCGTACGAAAAGATTCATCTCATCGGTCATTTCTTCTGGGATGCTGTGAAAGGAGGACCCAAAAGCTAAAGCCAAACCCACTCCACCGCAATCCGACGATCTCAACGGCGGCGTAACCAACGTACAAACTCCTAATCCTTTTCTCTATCTATCTATCTACACTAATTACCAATTCATCATCGCCCTTCACAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAATAGAGGAAAGTGAGACTTTGCCTCTCTAACTTTTGTTAATTCGCACAGAGGGTTTCTCGTTTTCGTTTCGATCCTCTTCAATTTCATTTCTGCTCTCTTACTTCTTCCACTCCACGATCTCCTGCTGGGTTTCGTCGTTCACCAATGGAAATGTATTGATAAGCCCTCCTACCCCCCCTCAGGTAACAGCCAACCACTTGTTTGACCGCTTTTTCTTTTTCTTTATTTCTTTATACCGCGACGGATATCTCGATCATACGATTCATTTGATTTTTCAGAATAAGATTGCAAAAACAACGATCTTGTTGCATAAACCTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAACACCATCGTTTCCTCCGATTCTAATGACCCCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATTAATGCAGAATCCGACTTCCATCCCAACGCCAATGATCAGAATATACAGAAGAAGGTACATCTTCAGGACAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAAGGCTCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGCCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGAATGAATCAGAGGCCTAATGGAGTCATAAATGGAACCGATGGAGGGGACACCTTTAAGAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCACTAGCCAAAAACTTTTCTGGTTACTTCGGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTACTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAGTCGAAGGGTATGTGGGGATGTTTGTTTTGTTTGAAAGATGTGGAATGCTTATTTACACTTATTATTAAGCTTTGAATGCCGTGCACTTTGTTTGATTTCTCGAGAACCAAACCCCTCAGACTTAACATGCCTGATGGTTTTGTATGGTGGAAGTATTGGAGTTTGTATATTTTCAGGTGTTCTTTTTTTAAGTTCTGTGAACCTGCTATAAGAGTATTATTTGATCGGACATTTTAGTACTAGTGGACTCTTGAGAAATCTCTTCTATTTCTTTTGTTTATGTTGCATAAATCTCATATTGATGTCTATTTTATTTATTTATTTTGCTTCATTCGTTTTACTTAGAAGAAGAATGGTTTTAGTCAAGGGAGACGAAGGATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATTGATCAGCAGGTAAGAGGCCTCCACCCCCAAACTCTCCTGCTCATGTGCGTTGCCTTGTCCTTTTTTACCTATTCATTTTTGGATCATGGAAATGGATTGTAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTGACTGGTTTTTCTCTTTTCTTTTTTTCCATTTGATATGATTTTTGGCATCTTACTGCTAGCTTAATGTTGTCTTCTTCAATAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGGTACAATCCCAAGTTCAGTTTATTCGTAGATACATTTCCTACCATGATATCATATTTAATTTACTTCATGCTGGCAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTCTATCCAGTCAGGGTGCTACCCTCAAAAACTGCAATAGCACCGGTCAATCCTGACTTTTTACCCAGGGTAATTGACTGCCCTCAATGGCATTCATCTATTTTTACTACATTCTAATTTGTTGTTAGCAATGCTGTCAACTCATTTTAATTTATTCTATTTCTTCTCTTGAAATTGGCTTTCTTGTGTTTTATTGTTTCTAGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTGGTTTGGAAGTGAGAAATCTCTGAATGTATTTGGGAACTGTGTTTTTGGAAGAGGAGAAGATGAAAGAACTTCAATATTGTCGATTGCTAGATTGACTGTTTTCATGTCATGCAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTCTGCACTTTCTCGTATAACAGATGTCATATTTCTTCATACTTTTATTAGATTCTCTTTACAATGCTTTCATATCCTCTGGTTAACTTAATCCATGTTATCTGTTAACCCGTGTAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCTACTCGTATAGCATTTGTTGAGTTTACAATGGTAAATCCTGTTCTATTCCACTGATTTTGTTGCTTTTTTTGTAACCTTTCCTCCCGCCATGTTTATAACCCTCTCCCTCTCTCTTTGGGTTGGTGTGGGGTAAGGGTGGGGGTGGGCTACTAGTCTGCTGTGGTTCTTGTACTCTTACCCTCCTCCCTCACCCGTACACTTTGCATTGGTTGGGTATAGAATGCATCTACAGTACCTGCTGTACTTATCATATCTATCAGTAAACTTAATAATGGGGGTAGTTTTCCTTATCAACCAGTTTGTTGTAGTTCCTCTATTTACCGTTCACCAATACATCTTTGTTTTTGTGGTGTAAAGAATGCATTTAGAGTACCTGCTTCACTTATTTTATCTATCAGTGAACTTAATGATGGACAGCACTTGATTGATGTCTTTAAGGTTAATTTCACTGCTGTCGAGCAGTGTCAAAATATCATTGCAATGCATGTTTCATCTTGTAAAATCATCGAATATATGATCCTTATCATTTGAGTGACTTTAGTGTTTCATGTTTGTGAATAACAAAGCATTAGCTATGCCCGAAAAGTCTTTTTGGAGAATAGTGGTGTTTTCCCATTTAGATGCACGAATGTTTACCTGTGCAGTCACATGAATGTTATTATGTTTGGCTGTAGCCACCCCTCCATAGCTTGCATGAAAATGTGTGCATTTGTTTTTAATTTGCAGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTCCCAATAAGGTTATTATAGTTCATTCTTGTTTCCTTTTCTGGTATTCGGCATTTTGAAAAATGTGTTGTGTTTTTGTTCTGAAAGGTATAACAATTCTGACTCTTATGGGTTCGTTTTCAGGGTGAGCCCGTCAAAGACCCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGAATGCTCCCTGCATCTGTCCCATGTTGGTCTGGTGCTCAATAGATATATTTATATATATTGCATATATATATATTATGGTTATAGAGATATATTCAGAAGGGGTTGTGGGCTTTGGTGATGCATGGATCCGCTGCAGTGGAGTTGGTACCTTTTTGTACCTTGAACTAGGTGTTGTTGGTGAATGAGATATTTGTTTAGTTTTTTTTTATAGAGTGGATGGCATTTTGAGGCTCTTAGTCGTTTATCTCTGGTGATGTTATGGTGGATGCACCGGTGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGGAACTTTCTTTCAATGTTTCTAACTGGAAACTCTTAATCAACTCTCCGCTCTTTACTCTC

mRNA sequence

AAATGGGAGGGCATATAAAGAAAAGAAAAGAAGGAAATGCATGATGCATGGTGATTGTTCATTCATGCATGGGGTAATGGGAAGGAGATGGGTATTTTAGGAATTATGAAAAGTTTGTTTGGATGACTGAGTTTGGTGTCCCTGAAATATGTTGAGAGGAAGGGGAAGGGGGCGTACGAAAAGATTCATCTCATCGGTCATTTCTTCTGGGATGCTGTGAAAGGAGGACCCAAAAGCTAAAGCCAAACCCACTCCACCGCAATCCGACGATCTCAACGGCGGCGTAACCAACAGGAAAGTGAGACTTTGCCTCTCTAACTTTTGTTAATTCGCACAGAGGGTTTCTCGTTTTCGTTTCGATCCTCTTCAATTTCATTTCTGCTCTCTTACTTCTTCCACTCCACGATCTCCTGCTGGGTTTCGTCGTTCACCAATGGAAATGTATTGATAAGCCCTCCTACCCCCCCTCAGAATAAGATTGCAAAAACAACGATCTTGTTGCATAAACCTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAACACCATCGTTTCCTCCGATTCTAATGACCCCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATTAATGCAGAATCCGACTTCCATCCCAACGCCAATGATCAGAATATACAGAAGAAGGTACATCTTCAGGACAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAAGGCTCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGCCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGAATGAATCAGAGGCCTAATGGAGTCATAAATGGAACCGATGGAGGGGACACCTTTAAGAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCACTAGCCAAAAACTTTTCTGGTTACTTCGGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTACTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAGTCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGAAGGATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTCTATCCAGTCAGGGTGCTACCCTCAAAAACTGCAATAGCACCGGTCAATCCTGACTTTTTACCCAGGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTGGTTTGGAAGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCTACTCGTATAGCATTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTCCCAATAAGGGTGAGCCCGTCAAAGACCCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGAATGCTCCCTGCATCTGTCCCATGTTGGTCTGGTGCTCAATAGATATATTTATATATATTGCATATATATATATTATGGTTATAGAGATATATTCAGAAGGGGTTGTGGGCTTTGGTGATGCATGGATCCGCTGCAGTGGAGTTGGTACCTTTTTGTACCTTGAACTAGGTGTTGTTGGTGAATGAGATATTTGTTTAGTTTTTTTTTATAGAGTGGATGGCATTTTGAGGCTCTTAGTCGTTTATCTCTGGTGATGTTATGGTGGATGCACCGGTGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGGAACTTTCTTTCAATGTTTCTAACTGGAAACTCTTAATCAACTCTCCGCTCTTTACTCTC

Coding sequence (CDS)

ATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAACACCATCGTTTCCTCCGATTCTAATGACCCCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATTAATGCAGAATCCGACTTCCATCCCAACGCCAATGATCAGAATATACAGAAGAAGGTACATCTTCAGGACAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAAGGCTCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGCCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGAATGAATCAGAGGCCTAATGGAGTCATAAATGGAACCGATGGAGGGGACACCTTTAAGAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCACTAGCCAAAAACTTTTCTGGTTACTTCGGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTACTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAGTCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGAAGGATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTCTATCCAGTCAGGGTGCTACCCTCAAAAACTGCAATAGCACCGGTCAATCCTGACTTTTTACCCAGGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTGGTTTGGAAGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCTACTCGTATAGCATTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTCCCAATAAGGGTGAGCCCGTCAAAGACCCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGA

Protein sequence

MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQNIQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN

Homology

[Close]

BLAST of Lsi07G003190 vs. ExPASy Swiss-Prot
Match: Q9LPI5 (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=3702 GN=CID11 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.1e-109
Identity = 206/288 (71.53%), Postives = 235/288 (81.60%), Query Frame = 0


Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFGGAGLGYTND-F 180
           +G DGG++FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F  AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDY 360
           APVNP FLPR++DEREMC+RTIYCTNIDKK    VTQ++VK+FFES CGEV RLRLLGDY
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKK----VTQSDVKIFFESFCGEVYRLRLLGDY 310

Query: 361 HHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 403
            HSTRIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 QHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Lsi07G003190 vs. ExPASy Swiss-Prot
Match: Q9S7N9 (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=3702 GN=CID12 PE=1 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.4e-106
Identity = 206/329 (62.61%), Postives = 248/329 (75.38%), Query Frame = 0


Query: 79  LPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVINGTDGGDTFKRDMRDLEE 138
           L SP+  + +   ++G  +N          G G++      +  +DGG++FKRDMR+L E
Sbjct: 18  LISPSPPSSVTSQESGASSNNDH------GGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 139 LLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNNSRRKKNGFSQG 198
           LLSKLNPMA+EF+PPSL K     F G      N F+   N   NE  + RRKK+   QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 199 RRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHF 258
           +RRMN + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 259 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYC 318
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 319 TNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCS 378
           TNIDKK    +TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCS
Sbjct: 258 TNIDKK----LTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCS 317

Query: 379 GVVLGSLPIRVSPSKTPVRPRS-PRAQLN 407
           GV+LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 318 GVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of Lsi07G003190 vs. ExPASy Swiss-Prot
Match: Q9SG10 (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=3702 GN=CID10 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 8.6e-104
Identity = 220/408 (53.92%), Postives = 277/408 (67.89%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSND----PKDVENQKPKNDSTLPINAESDFHPNA 60
           MAVAEN G K+ S  Q+L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 61  NDQNIQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRP 120
           +D+                       N  AQ  Q  NGF  NG              +R 
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNG--------------ERD 120

Query: 121 NGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLL 180
           N   NG         +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 181 QANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
                +   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 300
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHH 360
           VNP FLPRS+DEREMC RT+YCTNIDK+    +TQ ++K FFE LCGEV RLR LGDYHH
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKR----ITQIDLKGFFEMLCGEVHRLR-LGDYHH 351

Query: 361 STRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 405
            TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 QTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Lsi07G003190 vs. ExPASy Swiss-Prot
Match: Q9LRR6 (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3702 GN=CID9 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.4e-84
Identity = 163/278 (58.63%), Postives = 207/278 (74.46%), Query Frame = 0


Query: 132 DMRDLEELLSKLNPMAEEFVPP-------SLAKNFSGYFGGAGLGYTNDFLLQANSLNNE 191
           DM  L  +  KLNP+A+EF P        +     + +        T     +   L+ +
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 192 GNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVV 251
            +++ RK+  +SQGRRR+  +++  +R++  RRTVYVSDIDQ VTEE LA +F++CG+VV
Sbjct: 109 KDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVV 168

Query: 252 DCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPR 311
           DCRICGDP+S+L FAF+EF D++GA  +L+L GT+LGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 169 DCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPR 228

Query: 312 SDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 371
           S+DEREMC+RTIYCTNIDKK    V+QA+V+ FFES CGEV RLRLLGD  HSTRIAFVE
Sbjct: 229 SEDEREMCTRTIYCTNIDKK----VSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVE 288

Query: 372 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 403
           F +A+SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 FALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]

BLAST of Lsi07G003190 vs. ExPASy Swiss-Prot
Match: Q9C8M0 (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3702 GN=CID8 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 4.5e-84
Identity = 164/275 (59.64%), Postives = 206/275 (74.91%), Query Frame = 0


Query: 133 MRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNN---SR 192
           M+ L  +  KLNP A+EF  PS  +N            ++DF++       +      +R
Sbjct: 50  MKKLVAMFKKLNPEAKEFF-PSYKRN---------TNQSDDFVIAIKPSGEDNKKVAINR 109

Query: 193 RKKNGFSQGRR-RMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRI 252
           R++N ++QGRR R+  + +  +R++  RRTVYVSDIDQ VTEE LA +F+SCG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 253 CGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDE 312
           CGDPNS+L FAF+EF+D++GAR++L+L GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 313 REMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMA 372
           REMCSRTIYCTN+DK      T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MA
Sbjct: 230 REMCSRTIYCTNVDK----NATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 289

Query: 373 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 404
           ESA+AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 ESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]

BLAST of Lsi07G003190 vs. ExPASy TrEMBL
Match: A0A0A0KZ10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090360 PE=4 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 2.6e-212
Identity = 385/407 (94.59%), Postives = 391/407 (96.07%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQDRAAAATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Lsi07G003190 vs. ExPASy TrEMBL
Match: A0A1S3CI01 (polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo OX=3656 GN=LOC103501175 PE=4 SV=1)

HSP 1 Score: 746.1 bits (1925), Expect = 7.6e-212
Identity = 384/407 (94.35%), Postives = 390/407 (95.82%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQDRA AATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Lsi07G003190 vs. ExPASy TrEMBL
Match: A0A5D3BZR3 (Polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00260 PE=4 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.9e-211
Identity = 383/407 (94.10%), Postives = 389/407 (95.58%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQ RA AATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQHRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Lsi07G003190 vs. ExPASy TrEMBL
Match: A0A6J1E992 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111430559 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 7.1e-210
Identity = 377/406 (92.86%), Postives = 388/406 (95.57%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQS ENT+VSSDSNDPKDVENQKPKNDS + INAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI 120
            QKK HLQ+RAAAATSF+LPSPNFKAQMGQMQNGFETN QSLMVKSA+ YGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAATSFALPSPNFKAQMGQMQNGFETNAQSLMVKSAAAYGMNQRPNGVI 120

Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANS 180
           NG DGG+ FKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYFGGA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 LNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240
           LNNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           FLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360

Query: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Lsi07G003190 vs. ExPASy TrEMBL
Match: A0A6J1JC04 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111483053 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 3.5e-209
Identity = 375/406 (92.36%), Postives = 387/406 (95.32%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQS ENT++SSDSNDPKDVENQKPKNDS + INAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI 120
            QKK HLQ+RAAAA SF+LPSPNFK+QMGQMQNGFETN QSLMVKSA GYGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANS 180
           NG DGG+ FKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYFGGA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 LNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240
           LNNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           FLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360

Query: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Lsi07G003190 vs. NCBI nr
Match: XP_038900938.1 (polyadenylate-binding protein-interacting protein 12 [Benincasa hispida])

HSP 1 Score: 771.5 bits (1991), Expect = 3.5e-219
Identity = 394/406 (97.04%), Postives = 400/406 (98.52%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQSLENT+VSSDSNDPKDVENQKPKNDSTLP+NAE DFHPNANDQN
Sbjct: 1   MAVAENVGPKIGSPSQSLENTMVSSDSNDPKDVENQKPKNDSTLPMNAEPDFHPNANDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI 120
           +QKKVHLQ+RAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI
Sbjct: 61  MQKKVHLQERAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI 120

Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANS 180
           NG DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYT+DFLLQANS
Sbjct: 121 NGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTSDFLLQANS 180

Query: 181 LNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240
           +NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC
Sbjct: 181 VNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           FLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360

Query: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Lsi07G003190 vs. NCBI nr
Match: XP_004137206.1 (polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >XP_011653324.1 polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >KGN53617.1 hypothetical protein Csa_014431 [Cucumis sativus])

HSP 1 Score: 747.7 bits (1929), Expect = 5.4e-212
Identity = 385/407 (94.59%), Postives = 391/407 (96.07%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQDRAAAATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Lsi07G003190 vs. NCBI nr
Match: XP_008462907.1 (PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo])

HSP 1 Score: 746.1 bits (1925), Expect = 1.6e-211
Identity = 384/407 (94.35%), Postives = 390/407 (95.82%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQDRA AATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Lsi07G003190 vs. NCBI nr
Match: TYK04620.1 (polyadenylate-binding protein-interacting protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 743.4 bits (1918), Expect = 1.0e-210
Identity = 383/407 (94.10%), Postives = 389/407 (95.58%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQ RA AATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQHRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Lsi07G003190 vs. NCBI nr
Match: XP_022922600.1 (polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata] >XP_022922601.1 polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata])

HSP 1 Score: 739.6 bits (1908), Expect = 1.5e-209
Identity = 377/406 (92.86%), Postives = 388/406 (95.57%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQS ENT+VSSDSNDPKDVENQKPKNDS + INAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI 120
            QKK HLQ+RAAAATSF+LPSPNFKAQMGQMQNGFETN QSLMVKSA+ YGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAATSFALPSPNFKAQMGQMQNGFETNAQSLMVKSAAAYGMNQRPNGVI 120

Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANS 180
           NG DGG+ FKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYFGGA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 LNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240
           LNNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           FLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360

Query: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Lsi07G003190 vs. TAIR 10
Match: AT1G32790.1 (CTC-interacting domain 11 )

HSP 1 Score: 398.3 bits (1022), Expect = 7.5e-111
Identity = 206/288 (71.53%), Postives = 235/288 (81.60%), Query Frame = 0


Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFGGAGLGYTND-F 180
           +G DGG++FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F  AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDY 360
           APVNP FLPR++DEREMC+RTIYCTNIDKK    VTQ++VK+FFES CGEV RLRLLGDY
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKK----VTQSDVKIFFESFCGEVYRLRLLGDY 310

Query: 361 HHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 403
            HSTRIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 QHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Lsi07G003190 vs. TAIR 10
Match: AT4G10610.1 (CTC-interacting domain 12 )

HSP 1 Score: 387.9 bits (995), Expect = 1.0e-107
Identity = 206/329 (62.61%), Postives = 248/329 (75.38%), Query Frame = 0


Query: 79  LPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVINGTDGGDTFKRDMRDLEE 138
           L SP+  + +   ++G  +N          G G++      +  +DGG++FKRDMR+L E
Sbjct: 18  LISPSPPSSVTSQESGASSNNDH------GGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 139 LLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNNSRRKKNGFSQG 198
           LLSKLNPMA+EF+PPSL K     F G      N F+   N   NE  + RRKK+   QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 199 RRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHF 258
           +RRMN + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 259 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYC 318
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 319 TNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCS 378
           TNIDKK    +TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCS
Sbjct: 258 TNIDKK----LTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCS 317

Query: 379 GVVLGSLPIRVSPSKTPVRPRS-PRAQLN 407
           GV+LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 318 GVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of Lsi07G003190 vs. TAIR 10
Match: AT3G49390.1 (CTC-interacting domain 10 )

HSP 1 Score: 378.6 bits (971), Expect = 6.1e-105
Identity = 220/408 (53.92%), Postives = 277/408 (67.89%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSND----PKDVENQKPKNDSTLPINAESDFHPNA 60
           MAVAEN G K+ S  Q+L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 61  NDQNIQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRP 120
           +D+                       N  AQ  Q  NGF  NG              +R 
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNG--------------ERD 120

Query: 121 NGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLL 180
           N   NG         +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 181 QANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
                +   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 300
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHH 360
           VNP FLPRS+DEREMC RT+YCTNIDK+    +TQ ++K FFE LCGEV RLR LGDYHH
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKR----ITQIDLKGFFEMLCGEVHRLR-LGDYHH 351

Query: 361 STRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 405
            TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 QTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Lsi07G003190 vs. TAIR 10
Match: AT3G49390.2 (CTC-interacting domain 10 )

HSP 1 Score: 378.6 bits (971), Expect = 6.1e-105
Identity = 220/408 (53.92%), Postives = 277/408 (67.89%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSND----PKDVENQKPKNDSTLPINAESDFHPNA 60
           MAVAEN G K+ S  Q+L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 61  NDQNIQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRP 120
           +D+                       N  AQ  Q  NGF  NG              +R 
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNG--------------ERD 120

Query: 121 NGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLL 180
           N   NG         +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 181 QANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
                +   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 300
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHH 360
           VNP FLPRS+DEREMC RT+YCTNIDK+    +TQ ++K FFE LCGEV RLR LGDYHH
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKR----ITQIDLKGFFEMLCGEVHRLR-LGDYHH 351

Query: 361 STRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 405
            TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 QTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Lsi07G003190 vs. TAIR 10
Match: AT1G32790.2 (CTC-interacting domain 11 )

HSP 1 Score: 372.1 bits (954), Expect = 5.7e-103
Identity = 193/276 (69.93%), Postives = 222/276 (80.43%), Query Frame = 0


Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFGGAGLGYTND-F 180
           +G DGG++FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F  AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDY 360
           APVNP FLPR++DEREMC+RTIYCTNIDKK    VTQ++VK+FFES CGEV RLRLLGDY
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKK----VTQSDVKIFFESFCGEVYRLRLLGDY 310

Query: 361 HHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVS 391
            HSTRIAFVEF MAESAIAALNCSGVVLGSLPIR S
Sbjct: 311 QHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRSS 342

The following BLAST results are available for this feature:

BLAST of Lsi07G003190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPI5	1.1e-109	71.53	Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=...	[more]
Q9S7N9	1.4e-106	62.61	Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=...	[more]
Q9SG10	8.6e-104	53.92	Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=...	[more]
Q9LRR6	3.4e-84	58.63	Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q9C8M0	4.5e-84	59.64	Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Lsi07G003190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ10	2.6e-212	94.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090360 PE=4 SV=1	[more]
A0A1S3CI01	7.6e-212	94.35	polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3BZR3	4.9e-211	94.10	Polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo var. makuwa...	[more]
A0A6J1E992	7.1e-210	92.86	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita moschata OX=36...	[more]
A0A6J1JC04	3.5e-209	92.36	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661...	[more]

BLAST of Lsi07G003190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900938.1	3.5e-219	97.04	polyadenylate-binding protein-interacting protein 12 [Benincasa hispida]	[more]
XP_004137206.1	5.4e-212	94.59	polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >XP_01165...	[more]
XP_008462907.1	1.6e-211	94.35	PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo]	[more]
TYK04620.1	1.0e-210	94.10	polyadenylate-binding protein-interacting protein 12 [Cucumis melo var. makuwa]	[more]
XP_022922600.1	1.5e-209	92.86	polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata] >XP_02...	[more]

BLAST of Lsi07G003190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32790.1	7.5e-111	71.53	CTC-interacting domain 11	[more]
AT4G10610.1	1.0e-107	62.61	CTC-interacting domain 12	[more]
AT3G49390.1	6.1e-105	53.92	CTC-interacting domain 10	[more]
AT3G49390.2	6.1e-105	53.92	CTC-interacting domain 10	[more]
AT1G32790.2	5.7e-103	69.93	CTC-interacting domain 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 218..288 e-value: 5.3E-13 score: 59.2 coord: 315..390 e-value: 2.2E-8 score: 43.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 326..387 e-value: 7.7E-7 score: 28.9 coord: 219..281 e-value: 2.0E-10 score: 40.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 314..394 score: 11.758731
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 217..292 score: 13.20844
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 141..154 e-value: 3.4E-5 score: 23.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 177..294 e-value: 1.3E-17 score: 66.1 coord: 300..402 e-value: 9.4E-12 score: 47.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..201
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..406
None	No IPR available	PANTHER	PTHR32343:SF36	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKE	coord: 1..406
IPR034823	CID8-like protein, RNA recognition motif 1	CDD	cd12459	RRM1_CID8_like	coord: 216..294 e-value: 3.24716E-50 score: 162.205
IPR034825	CID8-like protein, RNA recognition motif 2	CDD	cd12460	RRM2_CID8_like	coord: 310..395 e-value: 2.08113E-58 score: 183.467
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 303..400
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 181..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G003190.1	Lsi07G003190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding