Lsi07G002610 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G002610
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	chr07: 2846342 .. 2848828 (+)
RNA-Seq Expression	Lsi07G002610
Synteny	Lsi07G002610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGATTGGATCACTAGCTGTACTGAACCGCAGGGGAAAAGTCTCTCCAATTTTCGGGTAAGTGTCTATTATTATATATATGTTCCACTTCTCTTTATCGTGCCCACCATTGTCAAGAGCTCGCAACTATCTCCACCAATACAAGTGAAGGAAAGAGCGAGGGCGGCGCCACCGTTACCCATCACCGGCTGCCAAAATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTATTCGATCTCCTCTGCGGATCGAACTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAAAACAAGATGTCCTCTTCGGCGACCACCGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCGTGGAAGGATCCGGAAGGTAGAATTATCAAGAATACCACTCGTGATAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCTGGCAAGTCCAAGTTTGAAGACATTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCGCTCACTAACCTCCTTTTTTTGGCTCTTTTCTTAATTTTTCTGATCGCTACGTACTTATTTCCTTTTATTCGCCATTTCTTGTCTGATTGGTGTAATTTGCAGTCCGGAATTTGGTAGTTTTCACTTTATCATGCATCGACCCTTGAACCCTAGACTTAACTGTGAGAAATCTTAGGCCCCGTTTGATCAAGTTTTTAGTTTTCTGTTTTAGTTTGCTCACAATTTATTTACCATGGTTTTTCTCTTTCTGATGGAAAGATTTGAATTCGTAGCCAAATTCCAAATTCCAAAAACAAAAATAAAAACATACTGCATTTGGTTTTGAGAACATTTGTAAAAAGTATAATTGAACACAAAAAAAACCTTTTGTGGAAGTTGTGTTTAAGTTTTAATTTTCGAAAACCAATAACTAAAGCCCAAATGATTATCAAAGGGCCGTAGTCTTTGGATTTCGGTTTGTTGAAGATTTAAGACTTAGGTTTCAAATAGTTGAATATTATTTCTAAACAGGATATCTGAATCTCGGTTGGATTTTACTGGATATATGTGTCTATATTTACGTATTTGCTTCATTTAAGGTTTGGAATTCATCTCGTTTTGGTTTGACAGAATAACCTTGAGTATGATTATATCCTGCCACTCTCTTATTTGCTTCGTTTTTGTTGAATTGTTATGTCTACGAGTGAGGAACTGTGTTATATCTCAGTTTCTAAGTTGAATTTTTTACTTACTTTCTGAAAAACCTATTATGACCCATTGATGCTCAAAGAATTAGCACAAGATTGTGAAAGATTTGGTTATCTTCTTACTTTTAGAATCTGGAAGTTGGTCGATACTGTGATGAATATTGTGTGGACCATTTTACTTTTAAACCTATGAAAGGATTACTTAATCAGTACTTGATTTTATCTAAATAGGTTCTCTTTATGTGATGTCAATTGGTTAAACCAACCATTCAATCGGAAAATCCATCTACAGATTTTCTCTTATATTTGGTAAAAAGCAAGAACGTCAACACTTTGAAACTCTCTATATTTGGAATTTTTTTTCCTGTTGCTGTGAATTAATATTTGGTCCAGCAAATGCTTAAGATTCTAGAATGCTATGAGATCTATGAACTTAAATGAAAGCTTTGGAAATCAAAGGGAGAGGTTCGGGAAGTAGCAGTAATTATACTTGTTACTAGTTCCATTACAAATTGGTACCCCCAACAAACACACACACACACACAAACAAGAACTTCCCTTTTTGTTAAATTTGGTTCTATATAGTCTTACAGTCCCTTTTTTTCTTATACTTGATCTTTCAATTAAGAGAAAAATTTGGAATTTTATGTACTCAGTCTTGCGAGCCCAGTTGATAAACTCCCAAAGAGTATTTATGTTTGGCAGTTCAATAGCATGTTTTTCGACAACTTCTAGGATCAGAAGGATATGTGGTGATGTTTTATTCGTTAGTAGCTGATATTTTTATCCTAGCAATTGTGTTTGTAGGGATTAGCATAATATAGAAGGCGTCTAAATGAGCAACACAATATAATGTTATTGCAGGTCCTTTTGGGCGTGGCCAAATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAACTTCTCTCATAAATCTCATCGCTCTATTTATGAAGCATTTAATCCATTTGAAGTTGTTCATGTAGGATTTGTTTCTGCGTCCAAGGCCACACGAATTTCTTACTATAATACTCTCTTGATAATTCATGTTGTGATTTGCCTATAGCTACTCTGTTTCAGTGACACTAAGATTTTTCTGAAAGTTCGATGCTTTTATGCCATTGAATTTTTGCCTTTGTAAACTTGACAACATTAACATTCAACTGGTTGTGGTTTGAGTTCTTCTGGTCTA

mRNA sequence

AGAGATTGGATCACTAGCTGTACTGAACCGCAGGGGAAAAGTCTCTCCAATTTTCGGGTAAGTGTCTATTATTATATATATGTTCCACTTCTCTTTATCGTGCCCACCATTGTCAAGAGCTCGCAACTATCTCCACCAATACAAGTGAAGGAAAGAGCGAGGGCGGCGCCACCGTTACCCATCACCGGCTGCCAAAATAGATTCCGATCGCAAGCGGAAGAAATCGGCTTATTCGATCTCCTCTGCGGATCGAACTGCGAAGGAAAAGCGTAGCAGCAGCAAGAAAAACAAGATGTCCTCTTCGGCGACCACCGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCGTGGAAGGATCCGGAAGGTAGAATTATCAAGAATACCACTCGTGATAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCTGGCAAGTCCAAGTTTGAAGACATTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAAATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAACTTCTCTCATAAATCTCATCGCTCTATTTATGAAGCATTTAATCCATTTGAAGTTGTTCATGTAGGATTTGTTTCTGCGTCCAAGGCCACACGAATTTCTTACTATAATACTCTCTTGATAATTCATGTTGTGATTTGCCTATAGCTACTCTGTTTCAGTGACACTAAGATTTTTCTGAAAGTTCGATGCTTTTATGCCATTGAATTTTTGCCTTTGTAAACTTGACAACATTAACATTCAACTGGTTGTGGTTTGAGTTCTTCTGGTCTA

Coding sequence (CDS)

ATGTCCTCTTCGGCGACCACCGGTCAGGTTAGGGCATCGCACATACTCATAAAGCACCAAGGTTCGCGACGTCCTGCTTCGTGGAAGGATCCGGAAGGTAGAATTATCAAGAATACCACTCGTGATAGCGCCGTCTCTCAGCTTACTGTCATTCGAGACGACATCATTTCTGGCAAGTCCAAGTTTGAAGACATTGCCTCTCGCATCTCTGACTGCAGCTCTGCCAAGCGTGGCGGCGATCTAGGTCCTTTTGGGCGTGGCCAAATGCAGAAGCCTTTTGAAGAAGCAACATTTGCCCTCAAGGTTGGAGAGGTAAGCGACATTGTGGATACTGACAGTGGAGTTCACATCATCAAGCGCACTGCTTAA

Protein sequence

MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA

Homology

[Close]

BLAST of Lsi07G002610 vs. ExPASy Swiss-Prot
Match: Q94G00 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.3e-52
Identity = 101/119 (84.87%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 3   SSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKF 62
           SS+   QVRASHILIKHQGSRR ASWKDPEG+II+NTTRDSAVSQL  +RDDI+SGK+KF
Sbjct: 2   SSSAGNQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKF 61

Query: 63  EDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
           +D+A+R SDCSSAKRGGDLGPFGR QMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 62  DDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRT 120

[Close]

BLAST of Lsi07G002610 vs. ExPASy Swiss-Prot
Match: Q9SL42 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-48
Identity = 93/118 (78.81%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 5   ATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  IASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
           +A+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]

BLAST of Lsi07G002610 vs. ExPASy Swiss-Prot
Match: Q9LEK8 (Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-44
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDIASR 68
           +VRASHILIKHQGSRR +SWKDP+G +I  TTRD AVSQL  +R +++S  + F D+ASR
Sbjct: 5   KVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDLASR 64

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
            S CSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKRT
Sbjct: 65  HSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 117

[Close]

BLAST of Lsi07G002610 vs. ExPASy Swiss-Prot
Match: P0C1J8 (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=pin1 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.8e-26
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDIASR 68
           +VRASH+LIK + SRRP+SW++         +++ A+  LT  +  I SG+     +A+ 
Sbjct: 41  RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATN 100

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
            SDC+SAKRGGDLG F RGQMQKPFEEATFAL+VGE+S  V TDSGVH+I RTA
Sbjct: 101 YSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWTDSGVHLILRTA 150

[Close]

BLAST of Lsi07G002610 vs. ExPASy Swiss-Prot
Match: Q9QUR7 (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus OX=10090 GN=Pin1 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.3e-26
Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 9   QVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDIASR 68
           +VR SH+L+KH  SRRP+SW+  +       +++ A+  +      I SG+  FE +AS+
Sbjct: 56  KVRCSHLLVKHSQSRRPSSWRQEK----ITRSKEEALELINGYIQKIKSGEEDFESLASQ 115

Query: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRT 122
            SDCSSAK  GDLGPF RGQMQKPFE+A+FAL+ GE+S  V TDSG+HII RT
Sbjct: 116 FSDCSSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 164

[Close]

BLAST of Lsi07G002610 vs. ExPASy TrEMBL
Match: A0A6J1J7P6 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482022 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Lsi07G002610 vs. ExPASy TrEMBL
Match: A0A6J1FQL7 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111447892 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Lsi07G002610 vs. ExPASy TrEMBL
Match: A0A5A7TSF6 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004880 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.5e-58
Identity = 117/122 (95.90%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA TGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDIA+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Lsi07G002610 vs. ExPASy TrEMBL
Match: A0A1S3BSY5 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103493185 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.5e-58
Identity = 117/122 (95.90%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA TGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDIA+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Lsi07G002610 vs. ExPASy TrEMBL
Match: A0A6J1J909 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482843 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
            A
Sbjct: 121 IA 122

[Close]

BLAST of Lsi07G002610 vs. NCBI nr
Match: XP_022943036.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita maxima] >XP_023516756.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita pepo subsp. pepo] >KAG6600578.1 Peptidyl-prolyl cis-trans isomerase Pin1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031218.1 Peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.3 bits (599), Expect = 2.7e-58
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Lsi07G002610 vs. NCBI nr
Match: XP_038878149.1 (peptidyl-prolyl cis-trans isomerase Pin1 [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 7.9e-58
Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA TGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLT IRDDIISGK 
Sbjct: 1   MSSSAATGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTAIRDDIISGKF 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Lsi07G002610 vs. NCBI nr
Match: XP_008452069.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo] >KAA0044807.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo var. makuwa] >TYK16657.1 peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-57
Identity = 117/122 (95.90%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA TGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGK+
Sbjct: 1   MSSSAPTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKA 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFEDIA+RISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGE+SDIVDTDSGVHIIKR
Sbjct: 61  KFEDIATRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKR 120

Query: 121 TA 123
           TA
Sbjct: 121 TA 122

[Close]

BLAST of Lsi07G002610 vs. NCBI nr
Match: XP_022984600.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1 peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.5 bits (589), Expect = 3.9e-57
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIRDDIISGKS
Sbjct: 1   MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRDDIISGKS 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
            A
Sbjct: 121 IA 122

[Close]

BLAST of Lsi07G002610 vs. NCBI nr
Match: XP_022929403.1 (peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MSSSATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS 60
           MSSSA  GQVRASHILIKHQGSRRPASWKDPEGRIIKNTTR+SAVSQLTVIR+DIISGKS
Sbjct: 1   MSSSAAVGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIREDIISGKS 60

Query: 61  KFEDIASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120
           KFED+ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
Sbjct: 61  KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR 120

Query: 121 TA 123
            A
Sbjct: 121 IA 122

[Close]

BLAST of Lsi07G002610 vs. TAIR 10
Match: AT2G18040.1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1 )

HSP 1 Score: 193.7 bits (491), Expect = 8.4e-50
Identity = 93/118 (78.81%), Postives = 108/118 (91.53%), Query Frame = 0


Query: 5   ATTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFED 64
           A+  QV+ASHILIKHQGSRR ASWKDPEG+II  TTR++AV QL  IR+DI+SGK+ FE+
Sbjct: 2   ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61

Query: 65  IASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKRTA 123
           +A+R+SDCSSAKRGGDLG FGRGQMQKPFEEAT+ALKVG++SDIVDTDSGVHIIKRTA
Sbjct: 62  VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119

[Close]

BLAST of Lsi07G002610 vs. TAIR 10
Match: AT1G26550.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 37/113 (32.74%), Postives = 50/113 (44.25%), Query Frame = 0


Query: 6   TTGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKSKFEDI 65
           T   V+A H+L + QG    A  K  +G +        A                +F  I
Sbjct: 39  TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPA----------------EFAKI 98

Query: 66  ASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHII 119
           A+  S+C S K+GGDLG F RG+M  PF++  F   VG  S    +  G HII
Sbjct: 99  AAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHII 135

The following BLAST results are available for this feature:

BLAST of Lsi07G002610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G00	2.3e-52	84.87	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica OX=3750 GN=PIN1 PE=2...	[more]
Q9SL42	1.2e-48	78.81	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana OX=3702 GN=PIN1...	[more]
Q9LEK8	1.0e-44	77.88	Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata OX=49450 GN=PARV12....	[more]
P0C1J8	4.8e-26	56.14	Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus delemar (strain RA 99-880 /...	[more]
Q9QUR7	6.3e-26	53.10	Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus OX=10090 ...	[more]

BLAST of Lsi07G002610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7P6	1.3e-58	97.54	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482022 ...	[more]
A0A6J1FQL7	1.3e-58	97.54	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC11144789...	[more]
A0A5A7TSF6	6.5e-58	95.90	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BSY5	6.5e-58	95.90	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103493185 PE=4...	[more]
A0A6J1J909	1.9e-57	95.90	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482843 ...	[more]

BLAST of Lsi07G002610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943036.1	2.7e-58	97.54	peptidyl-prolyl cis-trans isomerase Pin1 [Cucurbita moschata] >XP_022983413.1 pe...	[more]
XP_038878149.1	7.9e-58	97.54	peptidyl-prolyl cis-trans isomerase Pin1 [Benincasa hispida]	[more]
XP_008452069.1	1.3e-57	95.90	PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1 [Cucumis melo] >KAA0044807.1...	[more]
XP_022984600.1	3.9e-57	95.90	peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita maxima] >XP_023552613.1...	[more]
XP_022929403.1	1.1e-56	95.08	peptidyl-prolyl cis-trans isomerase Pin1-like [Cucurbita moschata]	[more]

BLAST of Lsi07G002610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18040.1	8.4e-50	78.81	peptidylprolyl cis/trans isomerase, NIMA-interacting 1	[more]
AT1G26550.1	1.4e-07	32.74	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type	PFAM	PF00639	Rotamase	coord: 14..121 e-value: 1.0E-23 score: 84.0
IPR000297	Peptidyl-prolyl cis-trans isomerase, PpiC-type	PROSITE	PS50198	PPIC_PPIASE_2	coord: 7..122 score: 28.402491
None	No IPR available	GENE3D	3.10.50.40		coord: 4..122 e-value: 8.7E-40 score: 137.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR10657:SF4	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED	coord: 3..122
None	No IPR available	PANTHER	PTHR10657	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 3..122
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 7..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G002610.1	Lsi07G002610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity