
Lsi07G002520 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAACGTAATTTTTGAAATACCTACTTTCCTAAAGGCGTTGGAATCGGCCACCTACTTAAACCAACCAACTAACCAATTAATGAATCAGCTCTCTAACTCCAAATTTAAAGGCCTCCTTGTCTTTTGCCTTCATTCCTCCAAAGTCCAAACTTATTCCAAATTCAACTCCCAAGATCACCATGGTGAACTTGGTTGCAGCTCAACGTCCACTGTTACATGCCCTAATGAAGAGGGCTGGCGTTGTACCTTACTCCCTCGACATCGACCCCGGCATCGTCATGAACTTCTGGATCCCTCTCGAGACCCTCCCTAGGACCAAAAAAGGCCAAGCCCCGAAACCTCCACAAAAACCAACCAAGCCTGTTGTCATCTTGATTCATGGTTTTGCAGCTGAAGGCATCGTCACTTGGCAATTTCAGGTATTAATATACAACTATATATATATATATATATATGGTTAGGTATAGACTAGGTTGCACCTAATTACATGACTCCCTTCTCTTTTATACCAAAACAAACAAACATTAAAAATAATTCAACTTTTTTAAGAAAGTTACGCATGACAATTTTTTATTAGGCAATAATTGGCTAGTCTTCTTTTTCATTTTAGGGTAAAATAACTTTTTGGTCCCTAAGTTTTGGGTTTAGTTTATATTTGTTCTCTAGGTTTTAAAATGTTACACATTTAATCCTTATGTTTTGATTTTTGTTTCAATTTAGTCCCTAAGTTTCATACTGTTGCAATTCTACCATTGAGATTTGATTTTTGTTTCAATTTGGTCCTTAAGTTTCAAGATTTTACATTTTTAACCTCAATTTTTCATTAAATACTCACTTCCAATCATTGACGTCAATGTCTACTACTTAATTTAAAATATTATAAAGTGAAATTTTAAAAGTGATGAAAAATAGTGAAACTTAATTAATTATAATTATCTTAATACTTTTAAATTTATTAAGATACTTTAACACTAAAGATGAAAAATTAGTATTTAGTGAAAAATCAAGGTTAAAAATGTAAAATCTTGAAACTTAGGGACCAAACTGAAACAAAAATCAAATTTCAAGATTGAAATTGTAACATTTTGAAATTTAAGAACTAAATTGAAATTAGAATTAAAACTTAAGAACTAAATAGATAACATTTTGAAACCTAGGATCAAATAGAAGCTAAACTCAAATTTGAGGACTAACAAAGGTATTTTACCCTTCATTTTAAATTTGTTAGAAAACTTATATAGCCCTTTTTTTATTGTTAAATTTCTTGTTTTTAAATGCTTATTTAGGTGGGTGCTCTTTCCAAACAATACTCTGTGTACGTGCCAGACCTCCTTTTTTTTGGCGGCTCCATCACCGACAAAGCGGATCGGTCACCGGCGTTTCAAGCGGAGTGTTTGGCAATAGGGCTAATGAAACTCGGGATTGAGAAATGCACGGTGGTGGGGTTTAGTTACGGTGGGATGGTGGCGTTCAAATTGGCGGAGCTCCGGCCAGAGTTGGTGGATGCGATGGTGGTTTCTGGATCGATTTTGGCAATGACAGATTCAATCAGCGGCGAAACGTTGCAAAGATTAGGATTTGCGTCCTCGTCGGAGCTTTTACTTCCGACGTCGGTAAAGGGTCTAAAAGCTCTTCTCTCCGTCGCCGCTCATAAAAAACTATGGTTTCCTGATCGACTCCATAAGGACTTCCTTGAGGTCAGTGCAAATATTTTGACTTTTCTTTTTTCCTATTTATTTATTTTTCAAGTTTGTATATCCATGGTATATAGGCTTTTTTTCAAATATAAAAAAATAAGTCAAACTATTTATAAATATTGAAAAATTTTACAATCTATCACTGATAGATCGCGATAGAATTCTATCGCTTTCTATCACTCCAGCTATAGAATTTATTTGCTTGAGCGATAGAATTCAGAATTCTATTGCGGTCTATCACTCATAGACAGTAAAATTTTTCTATATTCGTAAATAATTTGATATTTTTCCTGTTTATAGTAATTTCCCTAATATATATATATATATATATATATTGAACAAATTATTTATCACCAAATAAATAAATAATAATAATAATAATAATAATAATAATAATAATAATAATTGGTCTTTGTATTCATTATATTCAATTAAACTTTAAGGCTGACACAAACATATAATTCAACAGGTTGAGATATTAGTAACAAATTTTTTTTTTTTTTTTGTAAGAAGTGAGATCAGAAACTGAGAGTTCAAAGTTGGCCGCTGGCACCAATGATGTTTAAGATTAATACGTAACCGTTTAATTTTTAATTAAAAATTGTATTTTCTTTTATATGTTTCTAAGAATTTTAATTTTTTAAAATTATATTCAGGCCCGTTTGGATGGTTGAATTGACTAGTGTTTTCTCAAAAACTTATTTTTATTTAAACTATTTTTGACAAAAATGGTTTAAAATACACTTTAAAAACTATTTTGAATAGTTGCTGAACGTTCCAATTTTTTTTCAAAATGACTTATTTTTTTAAATTAAATACTTAAAATGTATTCCAAACATAGCCTCAAACAATATTAATATAATTTTACATTTTTTAAGGGTCTTTATCTTTTCTACAAATAATAGGTCTGTCTTCAAAACTATTTTTATTCACTAATATATTTGTTTTCTATTAAAATATAAACATAAAAGTATACGTGAACCATTATCATGAATGAAAAGAAGAACTCAAAAGAATATAATAAATTGTGATATCTTAATTACATAAAAATTTTTAATGTATAATAAAAAAAATTATGTATAATATAGAGTTTCTTAAGTTGAGGTAAATGATGATATCTCTATTTCATTGGGATAAAGGAAACAATGGGCAGAGGCAAATCCTCAGCAAAGTTGGTTAAGTGTCATATTTCTTAGAAAACATGTGTATTATAATTCAATAAAGAAAACGTGATAATGATTTTATTAATAATTCTTCAAATAAGGATTTATTATGCTGTAAAAATTGTAACACTCAAAGTTTAAGATAAAAATTACCATATTTGTTCAAACAAGATATTCATGAAATTAAAAATCAATCATAAAAGTTAACACACCAAAGTTAGGTTCAAATTTCCAACAACTTAATTATCCCAAGTTTGGCCAAATAAATGAATAAAAATCACATTTATTGCCCCTACTACCAACTCTAACCTAACTAATTTGAAATTCAATACTCCTACGACACGACAGAATGGGATTGGGTGCATATATATATATACATACATATATAACTTTAATTTAATATATTGAAATGATAATTTAAATTAGAAGGGACTACCTACGTGATGGACCAAACTTTTAGTAATTGGGTATTATTTACTTTACAGTTATTTTAAATTATTACTCACCAATGTTGTTTCAGTCTGTTCCAAACCACCTTTTTATCATAGCAAATAGATATATGGTCTATAACAATTTTAAAAACTTATAAATCAAATCAATTTTAATGAAATCATGAGCCAACCCATGAATTTCATTTGAAATTGAATTGCACGTGATGTTCTTTTCTTTATTTACATTTGATTTTATTTGTTTTTCCAATGATGAACAATTGCAGGTGATGTTCAATAACAGGAAAGATAGGGCAGAGCTCCTTCAAGGCTTAATTATCAGTAACAAAGACACCACAGTTCCTAAGTTTACTCAGGCAAATATTTCACATCTCTCTCTCTTAATTCCATTTCGTTTCATCAGTTAGAGACTGCTAATGATTCTTCATCAATCTCTTTGCAGAAGATACATCTTTTATGGGGCGAAAACGATCAGATTTTCAAGGTCGAGCTTGCCCGGAAACTACAAGAGTATGTATGATTTTCATTTGAAATTGAATCCCAAGTTTGATTCAATTCTAAACTATCATACAGCAACATTTAGTTTGATCAAAATCACTGATTTGATGATGTGTTTGTAGAGAACTGGGAGACAATGCAACATTTAGAGGCATACCGAAGGCGGGTCACTTGGTTCACTTGGAACGACCTTGCGTCTACAATAGGTGTCTCAAGCACTTCCTTGCTACCCTGCATTCAAATGCACAAACCAAATGAGTTGCCAAATTGGCTCCTTGCTATTCTGTTTTTCCATTTTTTCACAACAAAATTAAGATTCGTGTGTTTGATCAAACAATAGCACTTTTTTGCATAGTGAATGATTTTACCAACCTTTATCAATTCTTGATGTTTTTTGATAATGAAGTTTCAATTGTTATTTAAAGGGGAAAAAATGGTAATCCATTTTCATCAAACTTTGTCATCTGCATTTTGGTAATCAATTTTACCAACATTTATCAATTCTTGATGTTTTAACTCTTACTTTGAAGTTATATCTCAATAGGACATTGCAAAAATAGCTACCTCCATAGCATTGTTAACAGTCATCAGCCATGTTTTACGTCCTGGTGGCTGTTCAGAAGGAAAGTACCTAATTGTTGCGTTAACTCTTCAGTAG ATGATAACCTCTCTAACTCCAAATTTAAAGGCCTCCTTGTCTTTTGCCTTCATTCCTCCAAAGTCCAAACTTATTCCAAATTCAACTCCCAAGATCACCATGGTGAACTTGGTTGCAGCTCAACGTCCACTGTTACATGCCCTAATGAAGAGGGCTGGCGTTGTACCTTACTCCCTCGACATCGACCCCGGCATCGTCATGAACTTCTGGATCCCTCTCGAGACCCTCCCTAGGACCAAAAAAGGCCAAGCCCCGAAACCTCCACAAAAACCAACCAAGCCTGTTGTCATCTTGATTCATGGTTTTGCAGCTGAAGGCATCGTGGGTGCTCTTTCCAAACAATACTCTGTGTACGTGCCAGACCTCCTTTTTTTTGGCGGCTCCATCACCGACAAAGCGGATCGGTCACCGGCGTTTCAAGCGGAGTGTTTGGCAATAGGGCTAATGAAACTCGGGATTGAGAAATGCACGGTGGTGGGGTTTAGTTACGGTGGGATGGTGGCGTTCAAATTGGCGGAGCTCCGGCCAGAGTTGGTGGATGCGATGGTGGTTTCTGGATCGATTTTGGCAATGACAGATTCAATCAGCGGCGAAACGTTGCAAAGATTAGGATTTGCGTCCTCGTCGGAGCTTTTACTTCCGACGTCGGTAAAGGGTCTAAAAGCTCTTCTCTCCGTCGCCGCTCATAAAAAACTATGGTTTCCTGATCGACTCCATAAGGACTTCCTTGAGGTGATGTTCAATAACAGGAAAGATAGGGCAGAGCTCCTTCAAGGCTTAATTATCAGTAACAAAGACACCACATTAGAGACTGCTAATGATTCTTCATCAATCTCTTTGCAGAAGATACATCTTTTATGGGGCGAAAACGATCAGATTTTCAAGGTCGAGCTTGCCCGGAAACTACAAGAAGAACTGGGAGACAATGCAACATTTAGAGGCATACCGAAGGCGGGTCACTTGGTTCACTTGGAACGACCTTGCGTCTACAATAGGGGAAAAAATGGTAATCCATTTTCATCAAACTTTGTCATCTGCATTTTGGACATTGCAAAAATAGCTACCTCCATAGCATTGTTAACAGTCATCAGCCATGTTTTACGTCCTGGTGGCTGTTCAGAAGGAAAGTACCTAATTGTTGCGTTAACTCTTCAGTAG ATGATAACCTCTCTAACTCCAAATTTAAAGGCCTCCTTGTCTTTTGCCTTCATTCCTCCAAAGTCCAAACTTATTCCAAATTCAACTCCCAAGATCACCATGGTGAACTTGGTTGCAGCTCAACGTCCACTGTTACATGCCCTAATGAAGAGGGCTGGCGTTGTACCTTACTCCCTCGACATCGACCCCGGCATCGTCATGAACTTCTGGATCCCTCTCGAGACCCTCCCTAGGACCAAAAAAGGCCAAGCCCCGAAACCTCCACAAAAACCAACCAAGCCTGTTGTCATCTTGATTCATGGTTTTGCAGCTGAAGGCATCGTGGGTGCTCTTTCCAAACAATACTCTGTGTACGTGCCAGACCTCCTTTTTTTTGGCGGCTCCATCACCGACAAAGCGGATCGGTCACCGGCGTTTCAAGCGGAGTGTTTGGCAATAGGGCTAATGAAACTCGGGATTGAGAAATGCACGGTGGTGGGGTTTAGTTACGGTGGGATGGTGGCGTTCAAATTGGCGGAGCTCCGGCCAGAGTTGGTGGATGCGATGGTGGTTTCTGGATCGATTTTGGCAATGACAGATTCAATCAGCGGCGAAACGTTGCAAAGATTAGGATTTGCGTCCTCGTCGGAGCTTTTACTTCCGACGTCGGTAAAGGGTCTAAAAGCTCTTCTCTCCGTCGCCGCTCATAAAAAACTATGGTTTCCTGATCGACTCCATAAGGACTTCCTTGAGGTGATGTTCAATAACAGGAAAGATAGGGCAGAGCTCCTTCAAGGCTTAATTATCAGTAACAAAGACACCACATTAGAGACTGCTAATGATTCTTCATCAATCTCTTTGCAGAAGATACATCTTTTATGGGGCGAAAACGATCAGATTTTCAAGGTCGAGCTTGCCCGGAAACTACAAGAAGAACTGGGAGACAATGCAACATTTAGAGGCATACCGAAGGCGGGTCACTTGGTTCACTTGGAACGACCTTGCGTCTACAATAGGGGAAAAAATGGTAATCCATTTTCATCAAACTTTGTCATCTGCATTTTGGACATTGCAAAAATAGCTACCTCCATAGCATTGTTAACAGTCATCAGCCATGTTTTACGTCCTGGTGGCTGTTCAGAAGGAAAGTACCTAATTGTTGCGTTAACTCTTCAGTAG MITSLTPNLKASLSFAFIPPKSKLIPNSTPKITMVNLVAAQRPLLHALMKRAGVVPYSLDIDPGIVMNFWIPLETLPRTKKGQAPKPPQKPTKPVVILIHGFAAEGIVGALSKQYSVYVPDLLFFGGSITDKADRSPAFQAECLAIGLMKLGIEKCTVVGFSYGGMVAFKLAELRPELVDAMVVSGSILAMTDSISGETLQRLGFASSSELLLPTSVKGLKALLSVAAHKKLWFPDRLHKDFLEVMFNNRKDRAELLQGLIISNKDTTLETANDSSSISLQKIHLLWGENDQIFKVELARKLQEELGDNATFRGIPKAGHLVHLERPCVYNRGKNGNPFSSNFVICILDIAKIATSIALLTVISHVLRPGGCSEGKYLIVALTLQ Homology
BLAST of Lsi07G002520 vs. ExPASy Swiss-Prot
Match: P9WNH2 (Uncharacterized protein MT2788 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2788 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy Swiss-Prot
Match: P9WNH3 (Uncharacterized protein Rv2715 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2715 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy Swiss-Prot
Match: P0A573 (Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2734 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy Swiss-Prot
Match: A4ST17 (Pimeloyl-[acyl-carrier protein] methyl ester esterase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=bioH PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 3.0e-05 Identity = 33/100 (33.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy Swiss-Prot
Match: Q6IE26 (Epoxide hydrolase 4 OS=Mus musculus OX=10090 GN=Ephx4 PE=2 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 8.7e-05 Identity = 29/101 (28.71%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy TrEMBL
Match: A0A0A0KUS2 (AB hydrolase-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046660 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 1.1e-143 Identity = 262/305 (85.90%), Postives = 276/305 (90.49%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy TrEMBL
Match: A0A5A7TNT7 (Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00850 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 7.1e-143 Identity = 261/306 (85.29%), Postives = 279/306 (91.18%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy TrEMBL
Match: A0A5D3D2C9 (Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005000 PE=4 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 7.9e-142 Identity = 258/305 (84.59%), Postives = 276/305 (90.49%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy TrEMBL
Match: A0A1S3BTU7 (putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493198 PE=4 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 7.9e-142 Identity = 258/305 (84.59%), Postives = 276/305 (90.49%), Query Frame = 0
BLAST of Lsi07G002520 vs. ExPASy TrEMBL
Match: A0A6J1C537 (monoacylglycerol lipase abhd6-A-like OS=Momordica charantia OX=3673 GN=LOC111008351 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 1.3e-139 Identity = 256/305 (83.93%), Postives = 272/305 (89.18%), Query Frame = 0
BLAST of Lsi07G002520 vs. NCBI nr
Match: XP_038904799.1 (monoacylglycerol lipase ABHD6-like [Benincasa hispida]) HSP 1 Score: 524.2 bits (1349), Expect = 9.2e-145 Identity = 266/305 (87.21%), Postives = 277/305 (90.82%), Query Frame = 0
BLAST of Lsi07G002520 vs. NCBI nr
Match: XP_004146500.2 (uncharacterized protein LOC101205115 [Cucumis sativus] >KGN53303.1 hypothetical protein Csa_014480 [Cucumis sativus]) HSP 1 Score: 519.6 bits (1337), Expect = 2.3e-143 Identity = 262/305 (85.90%), Postives = 276/305 (90.49%), Query Frame = 0
BLAST of Lsi07G002520 vs. NCBI nr
Match: KAA0044794.1 (putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 516.9 bits (1330), Expect = 1.5e-142 Identity = 261/306 (85.29%), Postives = 279/306 (91.18%), Query Frame = 0
BLAST of Lsi07G002520 vs. NCBI nr
Match: XP_008452085.1 (PREDICTED: putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase isoform X1 [Cucumis melo] >TYK16669.1 putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 513.5 bits (1321), Expect = 1.6e-141 Identity = 258/305 (84.59%), Postives = 276/305 (90.49%), Query Frame = 0
BLAST of Lsi07G002520 vs. NCBI nr
Match: XP_022136704.1 (monoacylglycerol lipase abhd6-A-like [Momordica charantia]) HSP 1 Score: 506.1 bits (1302), Expect = 2.6e-139 Identity = 256/305 (83.93%), Postives = 272/305 (89.18%), Query Frame = 0
BLAST of Lsi07G002520 vs. TAIR 10
Match: AT2G18360.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 395.6 bits (1015), Expect = 4.6e-110 Identity = 199/307 (64.82%), Postives = 237/307 (77.20%), Query Frame = 0
BLAST of Lsi07G002520 vs. TAIR 10
Match: AT4G36610.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 384.4 bits (986), Expect = 1.1e-106 Identity = 190/305 (62.30%), Postives = 234/305 (76.72%), Query Frame = 0
BLAST of Lsi07G002520 vs. TAIR 10
Match: AT5G21950.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 156.0 bits (393), Expect = 6.1e-38 Identity = 100/297 (33.67%), Postives = 157/297 (52.86%), Query Frame = 0
BLAST of Lsi07G002520 vs. TAIR 10
Match: AT1G78210.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 146.4 bits (368), Expect = 4.9e-35 Identity = 88/290 (30.34%), Postives = 157/290 (54.14%), Query Frame = 0
BLAST of Lsi07G002520 vs. TAIR 10
Match: AT4G33180.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 146.0 bits (367), Expect = 6.4e-35 Identity = 93/295 (31.53%), Postives = 154/295 (52.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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