Lsi07G002320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G002320
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein RTE1-HOMOLOG
Location	chr07: 2573413 .. 2576711 (+)
RNA-Seq Expression	Lsi07G002320
Synteny	Lsi07G002320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCAATTGCTGCATTAAATGAAAAAAATGCAGATTAAAGAGGGCAAAGGAGAGATGAATCAAAACACTCCCGAAGAACCACGTGCAATTAAGTGGATATCTCATTCTTAAAACTCATACACAGCGATAATTATAGTAATAAGAGGAGGAGAAGAAAATTTTACAGTGCCGAACACATTCAAGATATTGCTCAGCCTTTGAAGAATCGAAGTTTTTGAGTAAATAAAGCATTACCACCGAACGCCCATTTGTGAGAAGTGGCATTGGAATGAAGAAACTTCGGATGAACTCGGGCATGCTCCAACTCTCCTGTATTATTTTCATAATCAACCTCTAGGAACCAAATAAATAAATACAAACATTAAACGCAGAACAAAGGATAACCATCAACAGGAAGAGGGCTTGCAGTAATGCCGAAATCGAAATTTCCGGCTTTCCAAAAACTGCGGCAATCAAGAGCTTTATCGTCTGATGATGATAAAATCGGCGTAGAACTGCCTCGTTGCTCTTGGAGTCTCGTCTGAGAATTCATCGCTATTTTGTTTGACATTGTGTTTGCTGCAGCTTCCTCATCGTCGCTGCTTGTTAAATCCACCAGAATAGGAGGGTTGCTTCCCGTCTTCGGCGGCATCAGCACTTTGCCGGAGTTCAAACCCGAGCGAGACCCGATCAGGAACTATTAGCCAAATATGTTCTGAATTCTGAACTCCAAAGCTTCTCACTTCTTTAGAAAAACGTTCAAAAGCAAAAACGATGTCGTTTCGGTCGTTTTTGGATATAACATAGACCAAAATCAATTTTAAAGTCCCCCTCGTCTCAACTGTGGAAACCGATCAAATTGATCGGTGATCAGTAGCTGCTTCAGACGATCTTTCTTCACCAGAATTGTTCCAATTGGTATCTTCAACTTCCTTTCACACTTTTCCCCAAAAATCTGTTTGTTTTTACTTCAAATTCTTCGCGTAGCTTGCTTGTTTTACTTGCTTGGTTTTTTTGTTCTATGCACTTGGTGTTTGGTTATCCCTAAACTTGAGGAGATTTGGGAACTTCATCTCGGTTCCAATGGCTGATTTGTTAACGTTATCGCATGCTAGATAGCCGAGGGATTTCCTTTGAACCTATTTTTTCAATTGTGTATTCTGTAATTGCTCTTCCAGCCTATGGCTGGTTCTCTGATAAAACTGGAAGTTACTACTCAACTTTGGACGTCTTTTGGGACATGAAATTATTTGATGAACTTTATACATTGTTTTCCCTCTTCTTTCTTCTTTCTACCTTTGCACAGATTCGTTGAAAGTTTGGTTGAACAGCCTAATTTCATTCTTCAAGATGAAGTTTAGACCTCTTTGTAAACCTTCTATTACATTCTCGCTTTCTGCGATCATCCCCCCAAAAAGGAAATCGGGATTAGCTGAGATTATGAAATTGACGGAAGGAAATTGGGATTGTTTAAGTTTAGGTCAATTTTTCCTTGTAGCTCTGTTAAGTTGAGGGATTCATTTCATTTCAGGCAGCATTTTATGAGTTTGAAAATGGAATCAAGTAAGGACCCTGAGAATCAGCTCATGATTGAAGGAACTATCGCTCAGAATATGAAGATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCTAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCAGTCGCACGTTATCTTCAAATCAACATAGATAAGGTACAAGGGATCAATCTTTTACCATCATCTTTCCCTCAATTTTGCTGTGAGACCAAAATTCATGACATGGTATTGTGATAGGAACCTCTCTTTCCCTTTAGTTAGTTTTTTGGTCCATTCCTTACACAACTGATTTTATTGTAACCGACATGCAGTGTTGCATTTCCAGTCATAGAAGTGAAGAAGAATTGAGGGAACTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTGACTTGCAATTGTCATTCCTTTGTGGCTAACAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAACTCTGATCTTTCTCAAGGGTCGGTGGGTCAGCAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGGTACTACGTTCCTTACCTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAATGTTTCTACACTTTTTACACGTTGGATTCTGTGAGTTGAATGAAGGTTAATTGCTTTTCTTCGTTGTATTTGTTCAAATCTTTGTTATTGTGCCGTAGTTCATATGGTGTATCATATACGTAGCAGGAGGCAAAATATTTAATACAACTCACGACCGTGATTACTTGCAGCCTGTTTAGGACATTAATCAATAGAGTTCATGAATTGTTGATTAGATAAGTGATAAATTAAAATATTTAAATAATCCCACTTATATTGTGATTAGGTGAACTTTGGGGGTTTCATGCTGGTTTATTGATATTTTTGGAAAAAGGTTTAGAATTAAAGAATTGTTTGTGAAGTATTTGGAAAAAAAATGGTAACTTTTATCAAAGTTTGATGAATAATATACTATAATCAGTAGTTTGAGTTCCGTACAATTTTTTATCAGAATTTTTATCCTATGTTGAATAAATTATTTCACTTTAAAGGCAAGTCTGTGAATGAAATTTGCATTGCAAATTTAAGCAGTGATGTATTGTTTGCTCTCCTTTTGCCCCCTAGATAAATAACTTTTTTTCTGATCATTCAATGAAATCACATTGTTACATCAGGATCCCCTCCTAGCATGAAGACAAATAGATAAAAGCTTGTGCTTCCCTCTAAAATGCAAGGGAAGGTAGCTGCAGATTCAACTTAGTGCCCTAGAATGACCAAATCACCCCACACAAAAACAAATACTTTTTTTTTTTAATCCTAACAAACACTATTGTATAGATTACAGAAGCTGCTAAACCATTTGAAACTAATTTCCTTTTGCTGTACAGGTAACCAGGATGAAGACTGAACACTACTATTCTTGTTCTATACCTTTCCTTTACCCTTCCTTGCTTACTCTTGCTAGTGCTGTGTGTATAGTCATATCTGATATCACTGAATCCACGCTTGATTAA

mRNA sequence

AGCAATTGCTGCATTAAATGAAAAAAATGCAGATTAAAGAGGGCAAAGGAGAGATGAATCAAAACACTCCCGAAGAACCACGTGCAATTAAGTGGATATCTCATTCTTAAAACTCATACACAGCGATAATTATAGTAATAAGAGGAGGAGAAGAAAATTTTACAGTGCCGAACACATTCAAGATATTGCTCAGCCTTTGAAGAATCGAAGTTTTTGAGTAAATAAAGCATTACCACCGAACGCCCATTTGTGAGAAGTGGCATTGGAATGAAGAAACTTCGGATGAACTCGGGCATGCTCCAACTCTCCTGTATTATTTTCATAATCAACCTCTAGGAACCAAATAAATAAATACAAACATTAAACGCAGAACAAAGGATAACCATCAACAGGAAGAGGGCTTGCAGTAATGCCGAAATCGAAATTTCCGGCTTTCCAAAAACTGCGGCAATCAAGAGCTTTATCGTCTGATGATGATAAAATCGGCGTAGAACTGCCTCGTTGCTCTTGGAGTCTCGTCTGAGAATTCATCGCTATTTTGTTTGACATTGTGTTTGCTGCAGCTTCCTCATCGTCGCTGCTTGTTAAATCCACCAGAATAGGAGGGTTGCTTCCCGTCTTCGGCGGCATCAGCACTTTGCCGGAGTTCAAACCCGAGCGAGACCCGATCAGGAACTATTAGCCAAATATGTTCTGAATTCTGAACTCCAAAGCTTCTCACTTCTTTAGAAAAACGTTCAAAAGCAAAAACGATGTCGTTTCGGTCGTTTTTGGATATAACATAGACCAAAATCAATTTTAAAGTCCCCCTCGTCTCAACTGTGGAAACCGATCAAATTGATCGGTGATCAGTAGCTGCTTCAGACGATCTTTCTTCACCAGAATTGTTCCAATTGGCAGCATTTTATGAGTTTGAAAATGGAATCAAGTAAGGACCCTGAGAATCAGCTCATGATTGAAGGAACTATCGCTCAGAATATGAAGATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCTAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCAGTCGCACGTTATCTTCAAATCAACATAGATAAGTGTTGCATTTCCAGTCATAGAAGTGAAGAAGAATTGAGGGAACTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTGACTTGCAATTGTCATTCCTTTGTGGCTAACAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAACTCTGATCTTTCTCAAGGGTCGGTGGGTCAGCAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGGTACTACGTTCCTTACCTTCTTGGCATTCTTCACTTTCTTCCTGGTAACCAGGATGAAGACTGAACACTACTATTCTTGTTCTATACCTTTCCTTTACCCTTCCTTGCTTACTCTTGCTAGTGCTGTGTGTATAGTCATATCTGATATCACTGAATCCACGCTTGATTAA

Coding sequence (CDS)

ATGAGTTTGAAAATGGAATCAAGTAAGGACCCTGAGAATCAGCTCATGATTGAAGGAACTATCGCTCAGAATATGAAGATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCTAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCAGTCGCACGTTATCTTCAAATCAACATAGATAAGTGTTGCATTTCCAGTCATAGAAGTGAAGAAGAATTGAGGGAACTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTGACTTGCAATTGTCATTCCTTTGTGGCTAACAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAACTCTGATCTTTCTCAAGGGTCGGTGGGTCAGCAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGGTACTACGTTCCTTACCTTCTTGGCATTCTTCACTTTCTTCCTGGTAACCAGGATGAAGACTGAACACTACTATTCTTGTTCTATACCTTTCCTTTACCCTTCCTTGCTTACTCTTGCTAGTGCTGTGTGTATAGTCATATCTGATATCACTGAATCCACGCTTGATTAA

Protein sequence

MSLKMESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVTRMKTEHYYSCSIPFLYPSLLTLASAVCIVISDITESTLD

Homology

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BLAST of Lsi07G002320 vs. ExPASy Swiss-Prot
Match: Q9SD42 (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.3e-69
Identity = 131/218 (60.09%), Postives = 164/218 (75.23%), Query Frame = 0


Query: 6   ESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEE----------ELRELDHSREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN +   + S RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLATL+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFL 214
           +K A++++ LP ++V++IG+ LGG TF+   +     L
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLL 214

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BLAST of Lsi07G002320 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.4e-53
Identity = 104/195 (53.33%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 26  KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINIDKCCI----SSHRSEEELRELDHSREISTWDDALRRSTQEFQHRSYNLLTCNC 145
           RYLQ++  KCC+      H  +   +  D      TWD+AL  ST+ F+H++YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLGFRTGG---WNVVNLATLIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 205
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 206 GTTFLTFLAFFTFFL 214
           G  FL  L+ F+  L
Sbjct: 223 GWPFLIGLSSFSLLL 234

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BLAST of Lsi07G002320 vs. ExPASy Swiss-Prot
Match: Q9H0R3 (Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 4.7e-31
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 27  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINIDKCCISSHRSEEELRELDHSREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVA 146
           Y +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGFRTG-GWNVVNLATLIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 198
             LN + +     WN+V L     L G++VS GA ++T+LPF+++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

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BLAST of Lsi07G002320 vs. ExPASy Swiss-Prot
Match: Q8BVA2 (Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30
Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 27  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINIDKCCISSHRSEEELRELDHSREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVA 146
           + +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKLDPGQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGFRTG-GWNVVNLATLIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 198
             LN + +     WN+V L     + G++VS GA ++T+LPFV++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

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BLAST of Lsi07G002320 vs. ExPASy TrEMBL
Match: A0A0A0KXZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.6e-114
Identity = 205/214 (95.79%), Postives = 210/214 (98.13%), Query Frame = 0


Query: 1   MSLKMESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MSL+MESSKDPENQLMIEG IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS+HRSEEELRE+DHSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLA LIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLV 214

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BLAST of Lsi07G002320 vs. ExPASy TrEMBL
Match: A0A1S4DZL7 (protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.5e-112
Identity = 203/214 (94.86%), Postives = 209/214 (97.66%), Query Frame = 0


Query: 1   MSLKMESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MSL+MES+KDPENQLMIEG IAQ+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS+HRSEEELRE+D SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAV 180
           ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLA LIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLV 214

[Close]

BLAST of Lsi07G002320 vs. ExPASy TrEMBL
Match: A0A6J1C4G0 (protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.4e-110
Identity = 196/210 (93.33%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 5   MESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           MES+ DPENQLM+EG IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS+HRSE+E+RE DH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAVIRTF 184
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFR+GGWNVVNLATLIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           LPFVVVFSIGLALGGTTFLTFLAFFTFFLV
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLV 210

[Close]

BLAST of Lsi07G002320 vs. ExPASy TrEMBL
Match: A0A5D3CZH3 (Protein RTE1-HOMOLOG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005200 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.0e-105
Identity = 190/199 (95.48%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 16  MIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVC 75
           MIEG IAQ+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGVILDFAGPNFVC
Sbjct: 1   MIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVC 60

Query: 76  VDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDDALRRSTQEFQHRSYN 135
           VDNFTFGAVARYLQIN DKCCIS+HRSEEELRE+D SREISTWDDALRRSTQEFQHRSYN
Sbjct: 61  VDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDDALRRSTQEFQHRSYN 120

Query: 136 LLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAVIRTFLPFVVVFSIGL 195
           LLTCNCHSFVANNLNRLGFRTGGWNVVNLA LIFLKGRWVSKGAVIRTFLPFVVVFSIGL
Sbjct: 121 LLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGL 180

Query: 196 ALGGTTFLTFLAFFTFFLV 215
           ALG TTFLTFLAFFTFFLV
Sbjct: 181 ALGDTTFLTFLAFFTFFLV 199

[Close]

BLAST of Lsi07G002320 vs. ExPASy TrEMBL
Match: A0A6J1FW19 (protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.1e-105
Identity = 188/210 (89.52%), Postives = 198/210 (94.29%), Query Frame = 0


Query: 5   MESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           M SS DPENQ+MIEG + Q MKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS+HRSE+E RE+D+ REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAVIRTF 184
           STQEFQHR+YNLLTCNCHSFVANNLNRLGF TGGWNVVNLA L+FLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           LPF VVFSIG+A+ GTTFLTFLAFFTFFLV
Sbjct: 181 LPFGVVFSIGVAMVGTTFLTFLAFFTFFLV 210

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BLAST of Lsi07G002320 vs. NCBI nr
Match: XP_031740651.1 (protein RTE1-HOMOLOG isoform X1 [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 9.5e-114
Identity = 205/214 (95.79%), Postives = 210/214 (98.13%), Query Frame = 0


Query: 1   MSLKMESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MSL+MESSKDPENQLMIEG IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 8   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 67

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS+HRSEEELRE+DHSREISTWDD
Sbjct: 68  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 127

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLA LIFLKGRWVSKGAV
Sbjct: 128 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 187

Query: 181 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV
Sbjct: 188 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLV 221

[Close]

BLAST of Lsi07G002320 vs. NCBI nr
Match: XP_004146489.1 (protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical protein Csa_014607 [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 9.5e-114
Identity = 205/214 (95.79%), Postives = 210/214 (98.13%), Query Frame = 0


Query: 1   MSLKMESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MSL+MESSKDPENQLMIEG IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS+HRSEEELRE+DHSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLA LIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLV 214

[Close]

BLAST of Lsi07G002320 vs. NCBI nr
Match: XP_008452120.1 (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 3.0e-112
Identity = 203/214 (94.86%), Postives = 209/214 (97.66%), Query Frame = 0


Query: 1   MSLKMESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MSL+MES+KDPENQLMIEG IAQ+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS+HRSEEELRE+D SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAV 180
           ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLA LIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLV 214

[Close]

BLAST of Lsi07G002320 vs. NCBI nr
Match: XP_038884143.1 (protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [Benincasa hispida])

HSP 1 Score: 411.4 bits (1056), Expect = 5.7e-111
Identity = 199/210 (94.76%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 5   MESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           MESS DPENQLMIEG IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESSNDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS+HRSEEELRE+DH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAVIRTF 184
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFR GGWNVVNLA LIFLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRIGGWNVVNLAALIFLKGRWVSKGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           LPFVVVF+IGLA+GGTTFLTFLAFFTFFLV
Sbjct: 181 LPFVVVFNIGLAVGGTTFLTFLAFFTFFLV 210

[Close]

BLAST of Lsi07G002320 vs. NCBI nr
Match: XP_022136620.1 (protein RTE1-HOMOLOG [Momordica charantia])

HSP 1 Score: 408.3 bits (1048), Expect = 4.9e-110
Identity = 196/210 (93.33%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 5   MESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           MES+ DPENQLM+EG IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEEELRELDHSREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS+HRSE+E+RE DH REISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWVSKGAVIRTF 184
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFR+GGWNVVNLATLIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLV 215
           LPFVVVFSIGLALGGTTFLTFLAFFTFFLV
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLV 210

[Close]

BLAST of Lsi07G002320 vs. TAIR 10
Match: AT3G51040.1 (RTE1-homolog )

HSP 1 Score: 263.1 bits (671), Expect = 2.4e-70
Identity = 131/218 (60.09%), Postives = 164/218 (75.23%), Query Frame = 0


Query: 6   ESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEE----------ELRELDHSREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN +   + S RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLATL+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFL 214
           +K A++++ LP ++V++IG+ LGG TF+   +     L
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLL 214

[Close]

BLAST of Lsi07G002320 vs. TAIR 10
Match: AT3G51040.2 (RTE1-homolog )

HSP 1 Score: 263.1 bits (671), Expect = 2.4e-70
Identity = 131/218 (60.09%), Postives = 164/218 (75.23%), Query Frame = 0


Query: 6   ESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEE----------ELRELDHSREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN +   + S RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLATL+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFL 214
           +K A++++ LP ++V++IG+ LGG TF+   +     L
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLL 214

[Close]

BLAST of Lsi07G002320 vs. TAIR 10
Match: AT3G51040.3 (RTE1-homolog )

HSP 1 Score: 263.1 bits (671), Expect = 2.4e-70
Identity = 131/218 (60.09%), Postives = 164/218 (75.23%), Query Frame = 0


Query: 6   ESSKDPENQLMIEGTIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINIDKCCISSHRSEE----------ELRELDHSREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN +   + S RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLATLIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLATL+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFL 214
           +K A++++ LP ++V++IG+ LGG TF+   +     L
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLL 214

[Close]

BLAST of Lsi07G002320 vs. TAIR 10
Match: AT2G26070.1 (Protein of unknown function (DUF778) )

HSP 1 Score: 208.8 bits (530), Expect = 5.3e-54
Identity = 104/195 (53.33%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 26  KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINIDKCCI----SSHRSEEELRELDHSREISTWDDALRRSTQEFQHRSYNLLTCNC 145
           RYLQ++  KCC+      H  +   +  D      TWD+AL  ST+ F+H++YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLGFRTGG---WNVVNLATLIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 205
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 206 GTTFLTFLAFFTFFL 214
           G  FL  L+ F+  L
Sbjct: 223 GWPFLIGLSSFSLLL 234

The following BLAST results are available for this feature:

BLAST of Lsi07G002320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD42	3.3e-69	60.09	Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1	[more]
F4ITL6	7.4e-53	53.33	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9H0R3	4.7e-31	40.12	Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2	[more]
Q8BVA2	1.4e-30	39.53	Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1	[more]

BLAST of Lsi07G002320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ7	4.6e-114	95.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1	[more]
A0A1S4DZL7	1.5e-112	94.86	protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1	[more]
A0A6J1C4G0	2.4e-110	93.33	protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1	[more]
A0A5D3CZH3	3.0e-105	95.48	Protein RTE1-HOMOLOG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G...	[more]
A0A6J1FW19	5.1e-105	89.52	protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=...	[more]

BLAST of Lsi07G002320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740651.1	9.5e-114	95.79	protein RTE1-HOMOLOG isoform X1 [Cucumis sativus]	[more]
XP_004146489.1	9.5e-114	95.79	protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical prote...	[more]
XP_008452120.1	3.0e-112	94.86	PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protei...	[more]
XP_038884143.1	5.7e-111	94.76	protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [B...	[more]
XP_022136620.1	4.9e-110	93.33	protein RTE1-HOMOLOG [Momordica charantia]	[more]

BLAST of Lsi07G002320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51040.1	2.4e-70	60.09	RTE1-homolog	[more]
AT3G51040.2	2.4e-70	60.09	RTE1-homolog	[more]
AT3G51040.3	2.4e-70	60.09	RTE1-homolog	[more]
AT2G26070.1	5.3e-54	53.33	Protein of unknown function (DUF778)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008496	TMEM222/RTE1	PFAM	PF05608	DUF778	coord: 99..174 e-value: 2.1E-19 score: 70.6 coord: 43..92 e-value: 4.4E-20 score: 72.9
IPR008496	TMEM222/RTE1	PANTHER	PTHR20921	UNCHARACTERIZED	coord: 3..223
None	No IPR available	PANTHER	PTHR20921:SF5	SUBFAMILY NOT NAMED	coord: 3..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G002320.1	Lsi07G002320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane