Lsi07G002300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G002300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein SHI RELATED SEQUENCE 1-like
Location	chr07: 2538914 .. 2540598 (+)
RNA-Seq Expression	Lsi07G002300
Synteny	Lsi07G002300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCATTGGAAAAAAGAAAAAAGAGCTAATGATAAAAGGACACGTGTGTAAATGGTGAGCCGTGGGATGAAGTTGGGGAATTAAAGTAGATGATTGATGATCTCCAGTTGGAGAGAGAGATGTGAGAAATCTGTAACACAAAATGGCATAAAAAAAAAAGGAGAGAGAAAAAAAAAAGGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGGCCTGAGAGAAGACAGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAACAAAGATGTGTGGATATGGGACTTCTTTTCTTCTCTATTTAAGTTAGCACCGCCGTTCCCCATGGCGGCGTTGCAGACTTCAATAAAACCTTTCACAATCTGATTCCCAATTCTACCCTTTCTTCTTCTTTTTTTTTTTCTTTTTCTTTTTCTTTTTTTAGTACGAAAATTTGATTAAGTGAAAAAAGGAAATTAATACATACCCTTTTTCTCAACACTGGCTTCCGATCATCGTTGAGAGGTTGTGTTTTTTTCTGATATGGATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGGCGGCGCCGGAAGCAGCGGAAGAGGTTCCAATTATCATTTTCCTACTACTACCACTACTATCACCACCACCACCGGCGGCGGCGGCGGCGAAATAATTCATCCGAGCGAAGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAGGAAGAACAGCATCAGCAGCAGCAGGCCGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGTGGCGGAGGGCATGTAACGAGCTGCCATGACTGTGGAAATCAAGCGAAAAAAGATTGCGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTTAAAAGCACTTGGGTTCCCGCCTCCAAACGCCGTGACCGCTACCTCCGTTGCGACGCCTCTAACCCCAAACGCCCTAAAGATAATCCCGCCGCGTCTTCAGGTACCAATTTATTTCCCCCTTTTCTATTTTTTTTTATCTTTTGCTAATTCCAACAAAATCCAAATCGATTGAGAAAATCAATTTCTTTTTTGGGGTTTTTAGGGTTCGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTACGAATGACAGCGTTGGACGAAACCAAAGACCAATATGCGTATCAAACAGCTGTCAATATTGGAGGCCATATCTTCAAAGGCATTCTTTACGACCACGGCCCTGAACAACCACCCACCTCCGCCTCTCCCGACGCCGCCGCAATCCTCATCACCACCGCCGAATCCGCCGCATTGCTCGATCCTCCTCCGTCTTACCCGACTCCTCTCACCACCTATATCGCCGCCGGTACGCAATTTTTTATTCCCCCATCTTAGCCGATCCTTTTCCCTTATGATATTTTAATAGGTGAAATTGAAATGAAGGAGAAGAAAAAAAGAACAATTAAGAGAGTGAAGGAAGTTTCAAGTTTGTGCCAAAAGTATATAATTTTTTATGAATAAATTTATAAGCTTGTAATTTTTCCAAGAGAGAGTTTGCATTAATTTGCCGCCATTGTTGG

mRNA sequence

TTTCCATTGGAAAAAAGAAAAAAGAGCTAATGATAAAAGGACACGTGTGTAAATGGTGAGCCGTGGGATGAAGTTGGGGAATTAAAGTAGATGATTGATGATCTCCAGTTGGAGAGAGAGATGTGAGAAATCTGTAACACAAAATGGCATAAAAAAAAAAGGAGAGAGAAAAAAAAAAGGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGGCCTGAGAGAAGACAGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAACAAAGATGTGTGGATATGGGACTTCTTTTCTTCTCTATTTAAGTTAGCACCGCCGTTCCCCATGGCGGCGTTGCAGACTTCAATAAAACCTTTCACAATCTGATTCCCAATTCTACCCTTTCTTCTTCTTTTTTTTTTTCTTTTTCTTTTTCTTTTTTTAGTACGAAAATTTGATTAAGTGAAAAAAGGAAATTAATACATACCCTTTTTCTCAACACTGGCTTCCGATCATCGTTGAGAGGTTGTGTTTTTTTCTGATATGGATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGGCGGCGCCGGAAGCAGCGGAAGAGGTTCCAATTATCATTTTCCTACTACTACCACTACTATCACCACCACCACCGGCGGCGGCGGCGGCGAAATAATTCATCCGAGCGAAGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAGGAAGAACAGCATCAGCAGCAGCAGGCCGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGTGGCGGAGGGCATGTAACGAGCTGCCATGACTGTGGAAATCAAGCGAAAAAAGATTGCGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTTAAAAGCACTTGGGTTCCCGCCTCCAAACGCCGTGACCGCTACCTCCGTTGCGACGCCTCTAACCCCAAACGCCCTAAAGATAATCCCGCCGCGTCTTCAGGGTTCGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTACGAATGACAGCGTTGGACGAAACCAAAGACCAATATGCGTATCAAACAGCTGTCAATATTGGAGGCCATATCTTCAAAGGCATTCTTTACGACCACGGCCCTGAACAACCACCCACCTCCGCCTCTCCCGACGCCGCCGCAATCCTCATCACCACCGCCGAATCCGCCGCATTGCTCGATCCTCCTCCGTCTTACCCGACTCCTCTCACCACCTATATCGCCGCCGGTACGCAATTTTTTATTCCCCCATCTTAGCCGATCCTTTTCCCTTATGATATTTTAATAGGTGAAATTGAAATGAAGGAGAAGAAAAAAAGAACAATTAAGAGAGTGAAGGAAGTTTCAAGTTTGTGCCAAAAGTATATAATTTTTTATGAATAAATTTATAAGCTTGTAATTTTTCCAAGAGAGAGTTTGCATTAATTTGCCGCCATTGTTGG

Coding sequence (CDS)

ATGGCCGGTTTTTTCCCACTAGGCGGCGCCGGAAGCAGCGGAAGAGGTTCCAATTATCATTTTCCTACTACTACCACTACTATCACCACCACCACCGGCGGCGGCGGCGGCGAAATAATTCATCCGAGCGAAGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAGGAAGAACAGCATCAGCAGCAGCAGGCCGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGTGGCGGAGGGCATGTAACGAGCTGCCATGACTGTGGAAATCAAGCGAAAAAAGATTGCGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTTAAAAGCACTTGGGTTCCCGCCTCCAAACGCCGTGACCGCTACCTCCGTTGCGACGCCTCTAACCCCAAACGCCCTAAAGATAATCCCGCCGCGTCTTCAGGGTTCGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTACGAATGACAGCGTTGGACGAAACCAAAGACCAATATGCGTATCAAACAGCTGTCAATATTGGAGGCCATATCTTCAAAGGCATTCTTTACGACCACGGCCCTGAACAACCACCCACCTCCGCCTCTCCCGACGCCGCCGCAATCCTCATCACCACCGCCGAATCCGCCGCATTGCTCGATCCTCCTCCGTCTTACCCGACTCCTCTCACCACCTATATCGCCGCCGGTACGCAATTTTTTATTCCCCCATCTTAG

Protein sequence

MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS

Homology

[Close]

BLAST of Lsi07G002300 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 7.5e-51
Identity = 141/369 (38.21%), Postives = 187/369 (50.68%), Query Frame = 0


Query: 1   MAGFFPL--GGAGSSGRGSN--------------------YHFPTTTTTITTTTGGGGGE 60
           MAGFF L  GG G  G G+N                    Y  P       T        
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  IIHPSEGL--FWYKNYERLETWEEEQHQQQ---QAEQGGEG--------FVYSGDESPA- 120
             + + G    W  + ++   ++ +QHQQ+    +   G G        F  SG+ S A 
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWV 180
               ++++M+RSG  GGG    SC DCGNQAKKDC HMRCRTCCKSRGFEC THV+STWV
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWV 180

Query: 181 PASKRRDR-----------YLRCDASNPKRPKDN-PAAS-----------SGFEMGNFPV 240
           PA+KRR+R            L    S PKR ++N PA S           SG E+GNFP 
Sbjct: 181 PAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPA 240

Query: 241 EVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ------------- 273
           EVSS+AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP               
Sbjct: 241 EVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGE 300

[Close]

BLAST of Lsi07G002300 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-47
Identity = 130/331 (39.27%), Postives = 175/331 (52.87%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTT-------------TGGGGGEIIHPSEGLF 60
           MAGFF LG  G      N+   T   + + T              GG  G     +  L+
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  WYKNYERLETWEEEQHQQQQAE----QGGEGFVYSGDE--SPARSSLVMVRSGRGGGGGH 120
            + N + +  ++++Q QQQ+ +      G G   S       +  +L+M+RSG G GG  
Sbjct: 61  QHPNNQEI-IFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGG-- 120

Query: 121 VTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCD------- 180
             SC DCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  +         
Sbjct: 121 -PSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQ 180

Query: 181 --ASNPKRPKDN-PAAS-------------SGFEMGNFPVEVSSTAVFRCVRMTALDETK 240
              S PKR ++  PA S             SG E+GNFP EVSS+AVFRCVR++++D+ +
Sbjct: 181 LGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEE 240

Query: 241 DQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPS----- 270
           ++YAY+TAV+IGGH+FKG+LYD GP +  +S        LIT   SA+   P  S     
Sbjct: 241 EEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGV 300

[Close]

BLAST of Lsi07G002300 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.4e-46
Identity = 122/304 (40.13%), Postives = 160/304 (52.63%), Query Frame = 0


Query: 49  YKNYERLETWEEEQHQQQQAEQ-------------------------GGEGF-VYSGDES 108
           YK +E  ++    QHQ Q  +Q                            GF + +GD  
Sbjct: 52  YKGFELWQSGNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHE 111

Query: 109 PARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVP 168
            +RS  VM+RSG GG      SC DCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTWVP
Sbjct: 112 ASRSGFVMMRSGGGG-----ISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVP 171

Query: 169 ASKRRDRYLRCDA--------------SNPKRPKDNPAASS-----------GFEMGNFP 228
           A+KRR+R  +  A                 KR +++P+ASS           G E+G FP
Sbjct: 172 AAKRRERQQQLAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFP 231

Query: 229 VEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQP---------PT 274
            +V ++AVF+C++M+++++ +DQ AYQ AV+IGGH+FKGILYD G E            T
Sbjct: 232 SKVRTSAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDT 291

[Close]

BLAST of Lsi07G002300 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.3e-42
Identity = 129/349 (36.96%), Postives = 171/349 (49.00%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGS---------NYHFPTTTTTITTTTGGGGGEIIHPSEGL-FWYK 60
           MAGFF LGG  ++   +         ++H    +  +         EI + ++G   W  
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYK----DEIYNNNKGFEIWPP 60

Query: 61  NYERLETWEEEQHQQQQAEQGGE----GFVYSGDES-----PARSSLVMVRSGRGGGGGH 120
            Y + +  +++Q QQQ A         G V SG  S      +RS    V S    GG  
Sbjct: 61  QYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFT 120

Query: 121 VT-----SCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRC--- 180
           VT     +C DCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRR+R  +    
Sbjct: 121 VTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASL 180

Query: 181 --------DASNPKRPKD--------------------------NPAASSGFEMG-NFPV 240
                   +  N KR ++                          N  ++SG E+  + P 
Sbjct: 181 QHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPP 240

Query: 241 EVSSTAVFRCVRMTALDETKDQ--YAYQTAVNIGGHIFKGILYDHGPEQ----------- 273
           EV+S A+FRCVR+++++E +D   YAYQTAVNIGGHIFKGILYD GPE            
Sbjct: 241 EVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLAS 300

[Close]

BLAST of Lsi07G002300 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.8e-39
Identity = 99/250 (39.60%), Postives = 128/250 (51.20%), Query Frame = 0


Query: 80  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKST 139
           D  P RSS       R G      +C DCGNQAKKDC HMRCRTCCKSRGF+C+THVKST
Sbjct: 98  DHEPVRSSTGGFTVTRQGN----MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKST 157

Query: 140 WVPASKRRDRYLRCDASNPKRPKDN---------------------------------PA 199
           WV A+KRR+R  +      KR +D                                   A
Sbjct: 158 WVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNA 217

Query: 200 ASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP--- 259
           +SSG E  + P E+SS AVFRC+R++++D+  ++YAYQTAV+IGGH+FKGILYD GP   
Sbjct: 218 SSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSD 277

Query: 260 ---------------------EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLT 270
                                +  P++A+ +A   + T   S   +DP   Y    TP  
Sbjct: 278 HHRYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFN 337

[Close]

BLAST of Lsi07G002300 vs. ExPASy TrEMBL
Match: A0A0A0KUG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109
Identity = 213/281 (75.80%), Postives = 223/281 (79.36%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE 60
           MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT---------GGEIIHPTTEGLFWYKNYERLETWE 60

Query: 61  EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR--GGGGGHVTSCHDCGNQAKK 120
            E+ QQQQ    EQGGEGFVYSGDESPARSSLVMVRSGR  GGGGG VTSC DCGNQAKK
Sbjct: 61  GEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKK 120

Query: 121 DCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFE 180
           DCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDR+LR D  N KRPKD      SSG +
Sbjct: 121 DCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLD 180

Query: 181 MGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASP 240
           MGNFP EV++ AVFRCVRMT+LDET DQYAYQTAVNIGG IFKGILYDHGPEQPP   S 
Sbjct: 181 MGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPS- 240

Query: 241 DAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
                    + SAALLDP P YPTPL+TYI AGTQFF+PPS
Sbjct: 241 ---------SSSAALLDPTPPYPTPLSTYITAGTQFFLPPS 262

[Close]

BLAST of Lsi07G002300 vs. ExPASy TrEMBL
Match: A0A5A7TNR6 (Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005220 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.4e-108
Identity = 213/282 (75.53%), Postives = 222/282 (78.72%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE 60
           MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT---------GGEIIHPTTEGLFWYKNYERLETWE 60

Query: 61  -EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGRGG--GGGHVTSCHDCGNQAK 120
            EE+HQQQQ    EQGGEGFVYSGDESPARSSLVMVRSGRGG  GGG VTSC DCGNQAK
Sbjct: 61  GEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAK 120

Query: 121 KDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGF 180
           KDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LR D  N KRPKD      SSG 
Sbjct: 121 KDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGL 180

Query: 181 EMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSAS 240
           +M NFP+EV++ AVFRCVRMT LDET DQYAYQTAVNIGGHIFKGILYDHGPEQPP   S
Sbjct: 181 DMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS 240

Query: 241 PDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
             +A         AALLD  P YPTPL+TYI AGTQFF+PPS
Sbjct: 241 SSSA---------AALLDSTPPYPTPLSTYITAGTQFFLPPS 264

[Close]

BLAST of Lsi07G002300 vs. ExPASy TrEMBL
Match: A0A1S3CNX3 (protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.4e-108
Identity = 213/282 (75.53%), Postives = 222/282 (78.72%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE 60
           MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT---------GGEIIHPTTEGLFWYKNYERLETWE 60

Query: 61  -EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGRGG--GGGHVTSCHDCGNQAK 120
            EE+HQQQQ    EQGGEGFVYSGDESPARSSLVMVRSGRGG  GGG VTSC DCGNQAK
Sbjct: 61  GEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAK 120

Query: 121 KDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGF 180
           KDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LR D  N KRPKD      SSG 
Sbjct: 121 KDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGL 180

Query: 181 EMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSAS 240
           +M NFP+EV++ AVFRCVRMT LDET DQYAYQTAVNIGGHIFKGILYDHGPEQPP   S
Sbjct: 181 DMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS 240

Query: 241 PDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
             +A         AALLD  P YPTPL+TYI AGTQFF+PPS
Sbjct: 241 SSSA---------AALLDSTPPYPTPLSTYITAGTQFFLPPS 264

[Close]

BLAST of Lsi07G002300 vs. ExPASy TrEMBL
Match: A0A6J1J480 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 3.0e-103
Identity = 203/287 (70.73%), Postives = 221/287 (77.00%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEE 60
           MAGFFPLGG    GR  NYH PTTTTT                +GLFWY+NYE L  W++
Sbjct: 1   MAGFFPLGG----GREPNYHLPTTTTT----------------DGLFWYRNYESLGIWQQ 60

Query: 61  EQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMR 120
           +Q QQ    Q GEGFVYSGDESP RSSLVM+RSGR  GGG V SC DCGNQAKKDC+HMR
Sbjct: 61  QQVQQ----QAGEGFVYSGDESPPRSSLVMLRSGR-NGGGQVISCQDCGNQAKKDCLHMR 120

Query: 121 CRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEV 180
           CRTCCKSRGF+CETHVKSTWVPASKRR+R+LR DA+N KRP+DN AASSG EMGNFP+EV
Sbjct: 121 CRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEV 180

Query: 181 SSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ------PPTSASPDA 240
           SSTAVFRCVRMT LDET DQ+AYQTAVNIGGH FKGILYDHGPEQ      PP SASPD 
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDG 240

Query: 241 AAILI----TTAE----SAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
            A+LI    TT E    SAALLDPPP YP PL TY+AAGTQFF+PP+
Sbjct: 241 GALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPT 262

[Close]

BLAST of Lsi07G002300 vs. ExPASy TrEMBL
Match: A0A6J1FUH1 (protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 5.1e-103
Identity = 201/288 (69.79%), Postives = 218/288 (75.69%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEE 60
           MAGFFPLGG    GR  NYH PTTTTT T              +GLFWY+NYE L  W++
Sbjct: 1   MAGFFPLGG----GREPNYHLPTTTTTTT--------------DGLFWYRNYESLGIWQQ 60

Query: 61  EQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMR 120
           +Q QQ    Q GEGFVYSGDESP RSSLVM+RSGR  GGG V SC DCGNQAKKDC+HMR
Sbjct: 61  QQVQQ----QAGEGFVYSGDESPPRSSLVMLRSGR-NGGGQVISCQDCGNQAKKDCLHMR 120

Query: 121 CRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEV 180
           CRTCCKSRGF+CETHVKSTWVPASKRR+R+LR D +N KRP+DN AASSG EM NFPVEV
Sbjct: 121 CRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEV 180

Query: 181 SSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ-------PPTSASPD 240
           SSTAVFRCVRMT LDET DQ+AYQTAVNIGGH FKGILYDHGPEQ       PP SASPD
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPNSASPD 240

Query: 241 AAAILITTAE--------SAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
             A+LIT           SAALLDPPP YP PL TY+AAGTQFF+PP+
Sbjct: 241 GGALLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPT 265

[Close]

BLAST of Lsi07G002300 vs. NCBI nr
Match: XP_038881630.1 (protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 468.0 bits (1203), Expect = 5.6e-128
Identity = 233/273 (85.35%), Postives = 242/273 (88.64%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEE 60
           MAGFFPL G GSSGRG NY FPTTTTT TT    GGGEIIHP++GLFWYKNYERLETWEE
Sbjct: 1   MAGFFPLDGGGSSGRGPNYQFPTTTTTTTT----GGGEIIHPTDGLFWYKNYERLETWEE 60

Query: 61  EQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMR 120
              QQQQ EQGGEGFVYSGDESPARSSLVMVRSGRGG GG V SC DCGNQAKKDCVHMR
Sbjct: 61  ---QQQQQEQGGEGFVYSGDESPARSSLVMVRSGRGGSGGQVMSCQDCGNQAKKDCVHMR 120

Query: 121 CRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEV 180
           CRTCCKSRGFECETHVKSTWVPASKRR+R+LRCD SNPKRPKD  AASSG EMG FP EV
Sbjct: 121 CRTCCKSRGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKD--AASSGLEMGIFPAEV 180

Query: 181 SSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILIT 240
           SSTAVFRCVRMT LDET +Q AYQTAVNIGGHIFKGILYDHGPEQPPTSASP+  A+LIT
Sbjct: 181 SSTAVFRCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGPEQPPTSASPNGGALLIT 240

Query: 241 TAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
           TAESA LLDPPP YPTPLTTYI AGTQFF+PP+
Sbjct: 241 TAESATLLDPPPPYPTPLTTYIPAGTQFFLPPT 264

[Close]

BLAST of Lsi07G002300 vs. NCBI nr
Match: XP_038881624.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 468.0 bits (1203), Expect = 5.6e-128
Identity = 233/273 (85.35%), Postives = 242/273 (88.64%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEE 60
           MAGFFPL G GSSGRG NY FPTTTTT TT    GGGEIIHP++GLFWYKNYERLETWEE
Sbjct: 4   MAGFFPLDGGGSSGRGPNYQFPTTTTTTTT----GGGEIIHPTDGLFWYKNYERLETWEE 63

Query: 61  EQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMR 120
              QQQQ EQGGEGFVYSGDESPARSSLVMVRSGRGG GG V SC DCGNQAKKDCVHMR
Sbjct: 64  ---QQQQQEQGGEGFVYSGDESPARSSLVMVRSGRGGSGGQVMSCQDCGNQAKKDCVHMR 123

Query: 121 CRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEV 180
           CRTCCKSRGFECETHVKSTWVPASKRR+R+LRCD SNPKRPKD  AASSG EMG FP EV
Sbjct: 124 CRTCCKSRGFECETHVKSTWVPASKRRERHLRCDGSNPKRPKD--AASSGLEMGIFPAEV 183

Query: 181 SSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILIT 240
           SSTAVFRCVRMT LDET +Q AYQTAVNIGGHIFKGILYDHGPEQPPTSASP+  A+LIT
Sbjct: 184 SSTAVFRCVRMTTLDETSEQCAYQTAVNIGGHIFKGILYDHGPEQPPTSASPNGGALLIT 243

Query: 241 TAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
           TAESA LLDPPP YPTPLTTYI AGTQFF+PP+
Sbjct: 244 TAESATLLDPPPPYPTPLTTYIPAGTQFFLPPT 267

[Close]

BLAST of Lsi07G002300 vs. NCBI nr
Match: XP_004146546.1 (protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >XP_031740725.1 protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN53280.1 hypothetical protein Csa_015228 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 2.6e-109
Identity = 213/281 (75.80%), Postives = 223/281 (79.36%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE 60
           MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT---------GGEIIHPTTEGLFWYKNYERLETWE 60

Query: 61  EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR--GGGGGHVTSCHDCGNQAKK 120
            E+ QQQQ    EQGGEGFVYSGDESPARSSLVMVRSGR  GGGGG VTSC DCGNQAKK
Sbjct: 61  GEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKK 120

Query: 121 DCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFE 180
           DCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDR+LR D  N KRPKD      SSG +
Sbjct: 121 DCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLD 180

Query: 181 MGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASP 240
           MGNFP EV++ AVFRCVRMT+LDET DQYAYQTAVNIGG IFKGILYDHGPEQPP   S 
Sbjct: 181 MGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPS- 240

Query: 241 DAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
                    + SAALLDP P YPTPL+TYI AGTQFF+PPS
Sbjct: 241 ---------SSSAALLDPTPPYPTPLSTYITAGTQFFLPPS 262

[Close]

BLAST of Lsi07G002300 vs. NCBI nr
Match: XP_008465489.1 (PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo] >KAA0044774.1 protein SHI RELATED SEQUENCE 1-like [Cucumis melo var. makuwa] >TYK16689.1 protein SHI RELATED SEQUENCE 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 4.9e-108
Identity = 213/282 (75.53%), Postives = 222/282 (78.72%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE 60
           MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFPTPTT---------GGEIIHPTTEGLFWYKNYERLETWE 60

Query: 61  -EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGRGG--GGGHVTSCHDCGNQAK 120
            EE+HQQQQ    EQGGEGFVYSGDESPARSSLVMVRSGRGG  GGG VTSC DCGNQAK
Sbjct: 61  GEEEHQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAK 120

Query: 121 KDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGF 180
           KDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LR D  N KRPKD      SSG 
Sbjct: 121 KDCAHMRCRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGL 180

Query: 181 EMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSAS 240
           +M NFP+EV++ AVFRCVRMT LDET DQYAYQTAVNIGGHIFKGILYDHGPEQPP   S
Sbjct: 181 DMANFPMEVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS 240

Query: 241 PDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
             +A         AALLD  P YPTPL+TYI AGTQFF+PPS
Sbjct: 241 SSSA---------AALLDSTPPYPTPLSTYITAGTQFFLPPS 264

[Close]

BLAST of Lsi07G002300 vs. NCBI nr
Match: KAG7031235.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386.7 bits (992), Expect = 1.6e-103
Identity = 201/289 (69.55%), Postives = 219/289 (75.78%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEE 60
           MAGF+PLGG    GR  NYH PTTTTT T              +GLFWY+NYE LE W++
Sbjct: 1   MAGFYPLGG----GREPNYHLPTTTTTTT--------------DGLFWYRNYESLEIWQQ 60

Query: 61  EQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMR 120
           +Q QQ    Q GEGFVYSGDESP RSSLVM+RSGR  GGG V SC DCGNQAKKDC+HMR
Sbjct: 61  QQVQQ----QAGEGFVYSGDESPPRSSLVMLRSGR-NGGGQVISCQDCGNQAKKDCLHMR 120

Query: 121 CRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEV 180
           CRTCCKSRGF+CETHVKSTWVPASKRR+R+LR D +N KRP+DN AASSG EMGNFPVEV
Sbjct: 121 CRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEV 180

Query: 181 SSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ--------PPTSASP 240
           SSTAVFRCVRMT LDET DQ+AYQTAVNIGGH FKGILYDHGPEQ        PP SASP
Sbjct: 181 SSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASP 240

Query: 241 DAAAILITTAE--------SAALLDPPPSYPTPLTTYIAAGTQFFIPPS 274
           D   +LIT           SAALLDPPP YP PL TY+AAGTQFF+PP+
Sbjct: 241 DGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPT 266

[Close]

BLAST of Lsi07G002300 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 202.2 bits (513), Expect = 5.3e-52
Identity = 141/369 (38.21%), Postives = 187/369 (50.68%), Query Frame = 0


Query: 1   MAGFFPL--GGAGSSGRGSN--------------------YHFPTTTTTITTTTGGGGGE 60
           MAGFF L  GG G  G G+N                    Y  P       T        
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNVNANANTNVNANAPS 60

Query: 61  IIHPSEGL--FWYKNYERLETWEEEQHQQQ---QAEQGGEG--------FVYSGDESPA- 120
             + + G    W  + ++   ++ +QHQQ+    +   G G        F  SG+ S A 
Sbjct: 61  SSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG 120

Query: 121 ---RSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWV 180
               ++++M+RSG  GGG    SC DCGNQAKKDC HMRCRTCCKSRGFEC THV+STWV
Sbjct: 121 AGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWV 180

Query: 181 PASKRRDR-----------YLRCDASNPKRPKDN-PAAS-----------SGFEMGNFPV 240
           PA+KRR+R            L    S PKR ++N PA S           SG E+GNFP 
Sbjct: 181 PAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPA 240

Query: 241 EVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ------------- 273
           EVSS+AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP               
Sbjct: 241 EVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGE 300

[Close]

BLAST of Lsi07G002300 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 191.8 bits (486), Expect = 7.2e-49
Identity = 130/331 (39.27%), Postives = 175/331 (52.87%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGSNYHFPTTTTTITTT-------------TGGGGGEIIHPSEGLF 60
           MAGFF LG  G      N+   T   + + T              GG  G     +  L+
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  WYKNYERLETWEEEQHQQQQAE----QGGEGFVYSGDE--SPARSSLVMVRSGRGGGGGH 120
            + N + +  ++++Q QQQ+ +      G G   S       +  +L+M+RSG G GG  
Sbjct: 61  QHPNNQEI-IFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGG-- 120

Query: 121 VTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCD------- 180
             SC DCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  +         
Sbjct: 121 -PSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQ 180

Query: 181 --ASNPKRPKDN-PAAS-------------SGFEMGNFPVEVSSTAVFRCVRMTALDETK 240
              S PKR ++  PA S             SG E+GNFP EVSS+AVFRCVR++++D+ +
Sbjct: 181 LGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEE 240

Query: 241 DQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPS----- 270
           ++YAY+TAV+IGGH+FKG+LYD GP +  +S        LIT   SA+   P  S     
Sbjct: 241 EEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGV 300

[Close]

BLAST of Lsi07G002300 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 172.2 bits (435), Expect = 5.9e-43
Identity = 129/349 (36.96%), Postives = 171/349 (49.00%), Query Frame = 0


Query: 1   MAGFFPLGGAGSSGRGS---------NYHFPTTTTTITTTTGGGGGEIIHPSEGL-FWYK 60
           MAGFF LGG  ++   +         ++H    +  +         EI + ++G   W  
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYK----DEIYNNNKGFEIWPP 60

Query: 61  NYERLETWEEEQHQQQQAEQGGE----GFVYSGDES-----PARSSLVMVRSGRGGGGGH 120
            Y + +  +++Q QQQ A         G V SG  S      +RS    V S    GG  
Sbjct: 61  QYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFT 120

Query: 121 VT-----SCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRC--- 180
           VT     +C DCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRR+R  +    
Sbjct: 121 VTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASL 180

Query: 181 --------DASNPKRPKD--------------------------NPAASSGFEMG-NFPV 240
                   +  N KR ++                          N  ++SG E+  + P 
Sbjct: 181 QHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPP 240

Query: 241 EVSSTAVFRCVRMTALDETKDQ--YAYQTAVNIGGHIFKGILYDHGPEQ----------- 273
           EV+S A+FRCVR+++++E +D   YAYQTAVNIGGHIFKGILYD GPE            
Sbjct: 241 EVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLAS 300

[Close]

BLAST of Lsi07G002300 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-40
Identity = 99/250 (39.60%), Postives = 128/250 (51.20%), Query Frame = 0


Query: 80  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKST 139
           D  P RSS       R G      +C DCGNQAKKDC HMRCRTCCKSRGF+C+THVKST
Sbjct: 98  DHEPVRSSTGGFTVTRQGN----MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKST 157

Query: 140 WVPASKRRDRYLRCDASNPKRPKDN---------------------------------PA 199
           WV A+KRR+R  +      KR +D                                   A
Sbjct: 158 WVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNA 217

Query: 200 ASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP--- 259
           +SSG E  + P E+SS AVFRC+R++++D+  ++YAYQTAV+IGGH+FKGILYD GP   
Sbjct: 218 SSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSD 277

Query: 260 ---------------------EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLT 270
                                +  P++A+ +A   + T   S   +DP   Y    TP  
Sbjct: 278 HHRYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFN 337

[Close]

BLAST of Lsi07G002300 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-40
Identity = 99/250 (39.60%), Postives = 128/250 (51.20%), Query Frame = 0


Query: 80  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKST 139
           D  P RSS       R G      +C DCGNQAKKDC HMRCRTCCKSRGF+C+THVKST
Sbjct: 98  DHEPVRSSTGGFTVTRQGN----MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKST 157

Query: 140 WVPASKRRDRYLRCDASNPKRPKDN---------------------------------PA 199
           WV A+KRR+R  +      KR +D                                   A
Sbjct: 158 WVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNA 217

Query: 200 ASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP--- 259
           +SSG E  + P E+SS AVFRC+R++++D+  ++YAYQTAV+IGGH+FKGILYD GP   
Sbjct: 218 SSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSD 277

Query: 260 ---------------------EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLT 270
                                +  P++A+ +A   + T   S   +DP   Y    TP  
Sbjct: 278 HHRYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS---IDPSSLYTAVATPFN 337

The following BLAST results are available for this feature:

BLAST of Lsi07G002300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD40	7.5e-51	38.21	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	1.0e-47	39.27	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
K4B6C9	9.4e-46	40.13	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9LQZ5	8.3e-42	36.96	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9FXH7	3.8e-39	39.60	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]

BLAST of Lsi07G002300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUG2	1.3e-109	75.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1	[more]
A0A5A7TNR6	2.4e-108	75.53	Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CNX3	2.4e-108	75.53	protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo OX=3656 GN=LOC103503109 PE=3...	[more]
A0A6J1J480	3.0e-103	70.73	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 ...	[more]
A0A6J1FUH1	5.1e-103	69.79	protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3...	[more]

BLAST of Lsi07G002300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881630.1	5.6e-128	85.35	protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]	[more]
XP_038881624.1	5.6e-128	85.35	protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]	[more]
XP_004146546.1	2.6e-109	75.80	protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >XP_031740725.1 protein SHI REL...	[more]
XP_008465489.1	4.9e-108	75.53	PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo] >KAA0044774.1 prot...	[more]
KAG7031235.1	1.6e-103	69.55	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi07G002300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	5.3e-52	38.21	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	7.2e-49	39.27	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	5.9e-43	36.96	SHI-related sequence 5	[more]
AT1G19790.1	2.7e-40	39.60	SHI-related sequence 7	[more]
AT1G19790.2	2.7e-40	39.60	SHI-related sequence 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 103..224 e-value: 3.7E-50 score: 170.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..81
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..270
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 176..223 e-value: 6.1E-26 score: 88.1
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 104..146 e-value: 4.7E-27 score: 91.6
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G002300.1	Lsi07G002300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding