Lsi07G002140 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G002140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr07: 2283959 .. 2285191 (-)
RNA-Seq Expression	Lsi07G002140
Synteny	Lsi07G002140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTCTCCATCTCCACCCGCCACATCCGTCGCCTATCTACGGCAGCCACCGCCGCCGCCAACGCCACGGCAACGACGTCCTCTTCAATATCCATTTCAAAAGCGAAATCTAAACTAAGAACCGAGTATGATCCAGATAAAGCCCTCGACATTTACTCTTCTGTTTCCACTCACTACACCTCACATGTATCCTCTCGTTACGCTCAGGAACTAACCGTCCGGCGCCTTGCAAAGTCTCGTCGATTCGATGACATCGAATCACTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAGCCTTTTTTGTCCACCCTGATTCGATCCTACGGTCGAGCTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAAATGGGGGATTTAGGTACTCCTCGTTCCGCGATTTCCTTTAATGCCCTGTTATCTGCTTGTAACCATTCGAAGCAATTCGACAAGGTTCCTCAACTGTTCGACGAAATTCCCAAGAGATATAATTTCTCTCCCAATAAGATCTCGTACGGGATCCTGGTTAAGTCCTATTGCGACGCGGGTTCCCCTGAGAAGGCCATGCAGATTGTAAGACAGATGGAGGAAAATGGCGTGGAGGTAACTACGGTGACATTCACAACCATTTTAGATGCTCTGTACAAGAAGGGTGAGAGCGAAGAGGCAGATAAAATCTGGAACAAGATGATATCAAAAGGGTGTGAACTTGATGTGGGAGCCTATAATGTTAGATTGATGCACGAGCATGGTGGCCAGCCAGAGCATGTGCAAGCTTTAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGACACGATTAGTTATAATTACTTGATGACTTGTTATTGTAAGAATGTGATGATTGATGAAGCAAAGAAAGTGTATGATGATATGGAGGTTTATGGGTGTAATAAGAATGCTGCAACTTTTAGGACATTTATATATTATCTCTGTAGAAATGGGGAGTATGAGAAAGGGTATAAGGTTTTCAAGGAGAGTGTGAAGATGCATAAGATTCCTGATTTTAGCACAGTGAAGTATTTGGTGGAGGGGCTAGTGGAGAAGAAGAAGATGAAAGAAGCTAAGGGTTTAATCAGGACTATAAGGAAGAAGTTTCCTCCTGAATCTTTGAAGGCTTGGAGAAAAGTTGAGGAGAGTCTTGGTTTGGCTTCTGTTGCTGATGATGCTTCTTTTAAGGATGATGAAACTAAAACATGA

mRNA sequence

ATGTCCTTCTCCATCTCCACCCGCCACATCCGTCGCCTATCTACGGCAGCCACCGCCGCCGCCAACGCCACGGCAACGACGTCCTCTTCAATATCCATTTCAAAAGCGAAATCTAAACTAAGAACCGAGTATGATCCAGATAAAGCCCTCGACATTTACTCTTCTGTTTCCACTCACTACACCTCACATGTATCCTCTCGTTACGCTCAGGAACTAACCGTCCGGCGCCTTGCAAAGTCTCGTCGATTCGATGACATCGAATCACTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAGCCTTTTTTGTCCACCCTGATTCGATCCTACGGTCGAGCTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAAATGGGGGATTTAGGTACTCCTCGTTCCGCGATTTCCTTTAATGCCCTGTTATCTGCTTGTAACCATTCGAAGCAATTCGACAAGGTTCCTCAACTGTTCGACGAAATTCCCAAGAGATATAATTTCTCTCCCAATAAGATCTCGTACGGGATCCTGGTTAAGTCCTATTGCGACGCGGGTTCCCCTGAGAAGGCCATGCAGATTGTAAGACAGATGGAGGAAAATGGCGTGGAGGTAACTACGGTGACATTCACAACCATTTTAGATGCTCTGTACAAGAAGGGTGAGAGCGAAGAGGCAGATAAAATCTGGAACAAGATGATATCAAAAGGGTGTGAACTTGATGTGGGAGCCTATAATGTTAGATTGATGCACGAGCATGGTGGCCAGCCAGAGCATGTGCAAGCTTTAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGACACGATTAGTTATAATTACTTGATGACTTGTTATTGTAAGAATGTGATGATTGATGAAGCAAAGAAAGTGTATGATGATATGGAGGTTTATGGGTGTAATAAGAATGCTGCAACTTTTAGGACATTTATATATTATCTCTGTAGAAATGGGGAGTATGAGAAAGGGTATAAGGTTTTCAAGGAGAGTGTGAAGATGCATAAGATTCCTGATTTTAGCACAGTGAAGTATTTGGTGGAGGGGCTAGTGGAGAAGAAGAAGATGAAAGAAGCTAAGGGTTTAATCAGGACTATAAGGAAGAAGTTTCCTCCTGAATCTTTGAAGGCTTGGAGAAAAGTTGAGGAGAGTCTTGGTTTGGCTTCTGTTGCTGATGATGCTTCTTTTAAGGATGATGAAACTAAAACATGA

Coding sequence (CDS)

ATGTCCTTCTCCATCTCCACCCGCCACATCCGTCGCCTATCTACGGCAGCCACCGCCGCCGCCAACGCCACGGCAACGACGTCCTCTTCAATATCCATTTCAAAAGCGAAATCTAAACTAAGAACCGAGTATGATCCAGATAAAGCCCTCGACATTTACTCTTCTGTTTCCACTCACTACACCTCACATGTATCCTCTCGTTACGCTCAGGAACTAACCGTCCGGCGCCTTGCAAAGTCTCGTCGATTCGATGACATCGAATCACTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAGCCTTTTTTGTCCACCCTGATTCGATCCTACGGTCGAGCTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAAATGGGGGATTTAGGTACTCCTCGTTCCGCGATTTCCTTTAATGCCCTGTTATCTGCTTGTAACCATTCGAAGCAATTCGACAAGGTTCCTCAACTGTTCGACGAAATTCCCAAGAGATATAATTTCTCTCCCAATAAGATCTCGTACGGGATCCTGGTTAAGTCCTATTGCGACGCGGGTTCCCCTGAGAAGGCCATGCAGATTGTAAGACAGATGGAGGAAAATGGCGTGGAGGTAACTACGGTGACATTCACAACCATTTTAGATGCTCTGTACAAGAAGGGTGAGAGCGAAGAGGCAGATAAAATCTGGAACAAGATGATATCAAAAGGGTGTGAACTTGATGTGGGAGCCTATAATGTTAGATTGATGCACGAGCATGGTGGCCAGCCAGAGCATGTGCAAGCTTTAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGACACGATTAGTTATAATTACTTGATGACTTGTTATTGTAAGAATGTGATGATTGATGAAGCAAAGAAAGTGTATGATGATATGGAGGTTTATGGGTGTAATAAGAATGCTGCAACTTTTAGGACATTTATATATTATCTCTGTAGAAATGGGGAGTATGAGAAAGGGTATAAGGTTTTCAAGGAGAGTGTGAAGATGCATAAGATTCCTGATTTTAGCACAGTGAAGTATTTGGTGGAGGGGCTAGTGGAGAAGAAGAAGATGAAAGAAGCTAAGGGTTTAATCAGGACTATAAGGAAGAAGTTTCCTCCTGAATCTTTGAAGGCTTGGAGAAAAGTTGAGGAGAGTCTTGGTTTGGCTTCTGTTGCTGATGATGCTTCTTTTAAGGATGATGAAACTAAAACATGA

Protein sequence

MSFSISTRHIRRLSTAATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSSVSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFKDDETKT

Homology

[Close]

BLAST of Lsi07G002140 vs. ExPASy Swiss-Prot
Match: Q9M065 (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 4.4e-148
Identity = 268/399 (67.17%), Postives = 319/399 (79.95%), Query Frame = 0


Query: 2   SFSISTRHIRRLSTAATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSSVSTHYT 61
           S  IS R +RR ++AA A    TA +S  IS+SKAKS LR E+DPDKAL IY++VS H  
Sbjct: 3   SSRISLRLVRRFASAA-ADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSA 62

Query: 62  SHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEHA 121
           S VSSRYAQELTVRRLAK RRF DIE+LIESHKNDPKI +EPF STLIRSYG+A MF HA
Sbjct: 63  SPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHA 122

Query: 122 MRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYN-FSPNKISYGILV 181
           MRT+ QM   GTPRSA+SFNALL+AC HSK FDKVPQLFDEIP+RYN   P+KISYGIL+
Sbjct: 123 MRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILI 182

Query: 182 KSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCE 241
           KSYCD+G+PEKA++I+RQM+  G+EVTT+ FTTIL +LYKKGE E AD +WN+M+ KGCE
Sbjct: 183 KSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCE 242

Query: 242 LDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKVY 301
           LD  AYNVR+M      PE V+ LIEEM++ GLKPDTISYNYLMT YC+  M+DEAKKVY
Sbjct: 243 LDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVY 302

Query: 302 DDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVEK 361
           + +E   C  NAATFRT I++LC +  YE+GY +FK+SV MHKIPDF+T+K+LV GLVE 
Sbjct: 303 EGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVEN 362

Query: 362 KKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVAD 400
           KK  +AKGLIRT++KKFPP  L AW+K+EE LGL S  D
Sbjct: 363 KKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSKTD 400

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BLAST of Lsi07G002140 vs. ExPASy Swiss-Prot
Match: Q9ZU67 (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g18520 PE=1 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 5.1e-128
Identity = 235/396 (59.34%), Postives = 301/396 (76.01%), Query Frame = 0


Query: 8   RHIRRLSTAATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSSVSTHYTSHVSSR 67
           R +RR ST AT   + T     +I++SKAKSKLR   DPDKAL IY SVS + TS +SSR
Sbjct: 9   RFLRRFST-ATGIDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSR 68

Query: 68  YAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEHAMRTYNQ 127
           YA ELTV+RLAKS+RF DIE+LIESHKN+PKI  E FLSTLIRSYGRA MF+HAM+ + +
Sbjct: 69  YAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEE 128

Query: 128 MGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRY-NFSPNKISYGILVKSYCDA 187
           M  LGTPR+ +SFNALL+AC HS  F++VPQLFDE P+RY N +P+KISYG+L+KSYCD+
Sbjct: 129 MDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDS 188

Query: 188 GSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCELDVGAY 247
           G PEKAM+I+R ME  GVEVT + FTTIL +LYK G  +EA+ +W +M++KGC+LD   Y
Sbjct: 189 GKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVY 248

Query: 248 NVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKVYDDMEVY 307
           NVRLM+     PE V+ L+EEM++ GLKPDT+SYNYLMT YC   M+ EAKKVY+ +E  
Sbjct: 249 NVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE-- 308

Query: 308 GCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVEKKKMKEA 367
               NAATFRT I++LC NG Y++G  VFK+S  +HKIPDF T K+L EGLV+  +M++A
Sbjct: 309 --QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA 368

Query: 368 KGLIRTIRKKFPPESLKAWRKVEESLGLASVADDAS 403
           +G+ R ++KKFPP  +  W+K+EE LGL S  + A+
Sbjct: 369 RGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAAA 399

[Close]

BLAST of Lsi07G002140 vs. ExPASy Swiss-Prot
Match: Q8LE47 (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-52
Identity = 120/386 (31.09%), Postives = 218/386 (56.48%), Query Frame = 0


Query: 10  IRRLSTAATAAANATATTSSSISISKAK-SKLRTEYDPDKALDIYSSVSTHYTSHVSSRY 69
           IR LS+A+T  +  + T  +S   SKA  S L++E DPD+ L+I  + S      +  R 
Sbjct: 23  IRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRI-DRI 82

Query: 70  AQELTVRRLAKSRRFDDIESLIESH-KNDPKITQEPFLSTLIRSYGRAGMFEHAMRTYNQ 129
           A    V  LA+ + F  + +L++   +N P +  E F +  I  Y +A M +H++R +  
Sbjct: 83  AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRD 142

Query: 130 MGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGILVKSYCDAG 189
           +      R+  S NALL AC  +K + +  +++ E+PK Y   P+  +Y  ++K +C++G
Sbjct: 143 LEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESG 202

Query: 190 SPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCELDVGAYN 249
           S   +  IV +ME  G++  + +F  ++   Y + +S+E  K+   M  +G  + V  YN
Sbjct: 203 SASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYN 262

Query: 250 VRLMHE-HGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKVYDDMEVY 309
           +R+       + +  +AL++ M ++G+KP+T++Y++L+  +C     +EAKK++  M   
Sbjct: 263 IRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNR 322

Query: 310 GCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVEKKKMKEA 369
           GC  ++  + T IYYLC+ G++E    + KES++ + +P FS +K LV GL +  K++EA
Sbjct: 323 GCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEA 382

Query: 370 KGLIRTIRKKFPPESLKAWRKVEESL 393
           K LI  +++KF   +++ W +VE +L
Sbjct: 383 KELIGQVKEKF-TRNVELWNEVEAAL 406

[Close]

BLAST of Lsi07G002140 vs. ExPASy Swiss-Prot
Match: Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.3e-50
Identity = 117/372 (31.45%), Postives = 214/372 (57.53%), Query Frame = 0


Query: 4   SISTRHIRRLSTAATAAANATATTSSSISISKAKSKL-RTEYDPDKALDIYSSV--STHY 63
           + +T  IRR S+AAT  +  TA T++     K+ + L   E +P + ++ +     S  +
Sbjct: 11  TFNTCPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERF 70

Query: 64  TSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEH 123
            ++++     + TVRRL  ++R   +E ++E  K    +++E F + +I  YG+AGMFE+
Sbjct: 71  RTNIA---VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFEN 130

Query: 124 AMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGILV 183
           A + + +M +    RS +SFNALLSA   SK+FD V +LF+E+P + +  P+ +SY  L+
Sbjct: 131 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 190

Query: 184 KSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCE 243
           K+ C+  S  +A+ ++ ++E  G++   VTF T+L + Y KG+ E  ++IW KM+ K   
Sbjct: 191 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVA 250

Query: 244 LDVGAYNVRLMH-EHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKV 303
           +D+  YN RL+   +  + + +  L  E+  SGLKPD  S+N ++        +DEA+  
Sbjct: 251 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAW 310

Query: 304 YDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVE 363
           Y ++  +G   + ATF   +  +C+ G++E   ++FKE+     +   +T++ LV+ LV+
Sbjct: 311 YKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVK 370

Query: 364 KKKMKEAKGLIR 372
             K +EA+ +++
Sbjct: 371 GSKREEAEEIVK 379

[Close]

BLAST of Lsi07G002140 vs. ExPASy Swiss-Prot
Match: Q8GW57 (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 193.7 bits (491), Expect = 4.0e-48
Identity = 122/385 (31.69%), Postives = 212/385 (55.06%), Query Frame = 0


Query: 5   ISTRHIRRL----STAATAAANATATTSSSISISK-----AKSKLRTEYDPDKALDIYSS 64
           +S RHIRR     S+AAT  A   +T S+ I   K     A  KL++E DP+K  +++ +
Sbjct: 2   LSLRHIRRFCHFPSSAATGIA-YVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKA 61

Query: 65  VSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 124
            +T+    + +R+A E TV RLA + R D IE L+E  K  P+  +E F+  +I  YG+A
Sbjct: 62  NATNRLV-IENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKA 121

Query: 125 GMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKIS 184
           GM + A+ T+  M   G  RS  SFNA L   + +     + +   + P +Y    + +S
Sbjct: 122 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 181

Query: 185 YGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMI 244
           + I +KS+C+ G  + A   +R+ME++G+    VT+TT++ ALYK       + +WN M+
Sbjct: 182 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 241

Query: 245 SKGCELDVGAYNVRLMH-EHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMID 304
            KGC+ ++  +NVR+    +  +      L+  M    ++PD+I+YN ++  +      D
Sbjct: 242 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPD 301

Query: 305 EAKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLV 364
            A++VY  M   G   N   ++T I+YLC+ G ++  Y + K+ ++    P+  TV+ L+
Sbjct: 302 MAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLL 361

Query: 365 EGLVEKKKMKEAKGLIRTIRKKFPP 380
           +GLV+K ++ +AK ++  + ++ PP
Sbjct: 362 KGLVKKGQLDQAKSIMELVHRRVPP 384

[Close]

BLAST of Lsi07G002140 vs. ExPASy TrEMBL
Match: A0A6J1J3W0 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111483156 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.1e-202
Identity = 363/414 (87.68%), Postives = 387/414 (93.48%), Query Frame = 0


Query: 4   SISTRHIRRLSTA--------ATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSS 63
           SI+TRHIRRLSTA        ATAA  ATATTSSSISISKAKSKLRTEYDPDKAL+IYSS
Sbjct: 3   SIATRHIRRLSTAATTTATATATAAVKATATTSSSISISKAKSKLRTEYDPDKALNIYSS 62

Query: 64  VSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 123
           VS+HYTS VSSRYAQE+T+RRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA
Sbjct: 63  VSSHYTSPVSSRYAQEITIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 122

Query: 124 GMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKIS 183
           GMFEHAMRTYNQM D GTPRSAISFNALL A NHSKQFDKVPQLFDEIPK+YNFSPNKIS
Sbjct: 123 GMFEHAMRTYNQMEDFGTPRSAISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKIS 182

Query: 184 YGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMI 243
           YGILVKSYC++GSPEKAMQIVR+MEEN VEVT VTFTTILDALYKKGESEEA+KIWNKMI
Sbjct: 183 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 242

Query: 244 SKGCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDE 303
           SKGCELDVGAYNVRLMHEHG +PEHV+ALIEEMANSG+KPDTISYNYLMTCYCKN MIDE
Sbjct: 243 SKGCELDVGAYNVRLMHEHGSKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 302

Query: 304 AKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVE 363
           AKKVYDDME+ GCNKNAATFRTF+YYLCRNG+YEKGY VFKESVK+HKIPD +TVKYLVE
Sbjct: 303 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 362

Query: 364 GLVEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFKDDETK 410
           GL+EKKKMKEAKGLIRTIRKKFPP+SLKAWRKVEE+LGLAS +  +S  DDET+
Sbjct: 363 GLMEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLASSSSSSSKADDETE 416

[Close]

BLAST of Lsi07G002140 vs. ExPASy TrEMBL
Match: A0A5D3D1X8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005400 PE=4 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.6e-201
Identity = 358/415 (86.27%), Postives = 389/415 (93.73%), Query Frame = 0


Query: 1   MSFSISTR-HIRRLSTAATAAA----NATATTSSSISISKAKSKLRTEYDPDKALDIYSS 60
           MSFSISTR HIRRLSTAATAAA    NAT TTSSS+SISKAKSKLR EYDPDKAL+IYSS
Sbjct: 1   MSFSISTRHHIRRLSTAATAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS 60

Query: 61  VSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 120
           VS+HYTS V+SRYAQE+T+RRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYGR 
Sbjct: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120

Query: 121 GMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKIS 180
           GMFEHAMRTYNQMGDLGTPRSA+SFNALLSACNHSKQFDKVPQLFDE+PKRYNFSPNKIS
Sbjct: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180

Query: 181 YGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMI 240
           YGILVKSYCDAGSPEKA+QI+R+MEEN VEVT VTFTTI++ALYKKGES EA+KIW+KM+
Sbjct: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMM 240

Query: 241 SKGCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDE 300
           SKGCELDVGAYNVRLMHEHGG+PE VQA+IEEMANSGLKPD ISYNYLMTCYCKN MIDE
Sbjct: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300

Query: 301 AKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVE 360
           AKKVY+DME+ GCNKNAATFRTFIY+LCRNGEYEKGYKVFKESVKM+KIPDF+T+KYLVE
Sbjct: 301 AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE 360

Query: 361 GLVEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFKDDETKT 411
           GLVEKK M+EAKGLIRT+RKKFPP++LKAWR+VEE +GLAS  DD S KDD   +
Sbjct: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSS 415

[Close]

BLAST of Lsi07G002140 vs. ExPASy TrEMBL
Match: A0A1S3BX19 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494372 PE=4 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.6e-201
Identity = 358/415 (86.27%), Postives = 389/415 (93.73%), Query Frame = 0


Query: 1   MSFSISTR-HIRRLSTAATAAA----NATATTSSSISISKAKSKLRTEYDPDKALDIYSS 60
           MSFSISTR HIRRLSTAATAAA    NAT TTSSS+SISKAKSKLR EYDPDKAL+IYSS
Sbjct: 1   MSFSISTRHHIRRLSTAATAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYSS 60

Query: 61  VSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 120
           VS+HYTS V+SRYAQE+T+RRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYGR 
Sbjct: 61  VSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGRV 120

Query: 121 GMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKIS 180
           GMFEHAMRTYNQMGDLGTPRSA+SFNALLSACNHSKQFDKVPQLFDE+PKRYNFSPNKIS
Sbjct: 121 GMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKIS 180

Query: 181 YGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMI 240
           YGILVKSYCDAGSPEKA+QI+R+MEEN VEVT VTFTTI++ALYKKGES EA+KIW+KM+
Sbjct: 181 YGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKMM 240

Query: 241 SKGCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDE 300
           SKGCELDVGAYNVRLMHEHGG+PE VQA+IEEMANSGLKPD ISYNYLMTCYCKN MIDE
Sbjct: 241 SKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMIDE 300

Query: 301 AKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVE 360
           AKKVY+DME+ GCNKNAATFRTFIY+LCRNGEYEKGYKVFKESVKM+KIPDF+T+KYLVE
Sbjct: 301 AKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLVE 360

Query: 361 GLVEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFKDDETKT 411
           GLVEKK M+EAKGLIRT+RKKFPP++LKAWR+VEE +GLAS  DD S KDD   +
Sbjct: 361 GLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAGDDVSSKDDNVSS 415

[Close]

BLAST of Lsi07G002140 vs. ExPASy TrEMBL
Match: A0A6J1ETZ0 (scarecrow-like protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111435912 PE=3 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 1.0e-200
Identity = 359/405 (88.64%), Postives = 382/405 (94.32%), Query Frame = 0


Query: 4   SISTRHIRRLSTA------ATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSSVS 63
           SI+TRHIRRLSTA      ATAAA ATATTSSSISISKAKSKLRTEYDPDKAL+IYSSVS
Sbjct: 13  SIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSVS 72

Query: 64  THYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGM 123
           +HYTS VSSRYAQELT+RRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYG+AGM
Sbjct: 73  SHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGQAGM 132

Query: 124 FEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYG 183
           FEHAMRTYNQM D GTPRS ISFNALL A NHSKQFDKVPQLFDEIPK+YNFSPNKISYG
Sbjct: 133 FEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKISYG 192

Query: 184 ILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISK 243
           ILVKSYC++GSPEKAMQIVR+MEEN VEVT VTFTTILDALYKKGESEEA+KIWNKMISK
Sbjct: 193 ILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISK 252

Query: 244 GCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAK 303
           GCELDVGAYNVRLMHEHGG+PEHV+ALIEEMANSG+KPDTISYNYLMTCYCKN MIDEAK
Sbjct: 253 GCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAK 312

Query: 304 KVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGL 363
           KVYDDME+ GCNKNAATFRTF+YYLCRNG+YEKGY VFKESVK+HKIPD +TVKYLVEGL
Sbjct: 313 KVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGL 372

Query: 364 VEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDAS 403
           +EKKKMKEAKGLIRTIRKKFPP+SLK WRKVEE+LGLAS +  +S
Sbjct: 373 MEKKKMKEAKGLIRTIRKKFPPDSLKTWRKVEEALGLASSSASSS 417

[Close]

BLAST of Lsi07G002140 vs. ExPASy TrEMBL
Match: A0A6J1C5B1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111008507 PE=4 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 5.9e-196
Identity = 349/405 (86.17%), Postives = 377/405 (93.09%), Query Frame = 0


Query: 1   MSFSISTRHIRRLSTAATAAA-----NATATTSSSISISKAKSKLRTEYDPDKALDIYSS 60
           MSFSIS RHIRRLST+A AAA      AT   +SSISISKAKSKLRTEYDPDKALDIYSS
Sbjct: 1   MSFSISARHIRRLSTSAAAAAAESSSTATVPATSSISISKAKSKLRTEYDPDKALDIYSS 60

Query: 61  VSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 120
           VS HYTS VSSRYAQELT+RRLAK+RRFDD+ESLIESHKNDPKITQEPFLSTLIRSYGRA
Sbjct: 61  VSNHYTSPVSSRYAQELTIRRLAKARRFDDVESLIESHKNDPKITQEPFLSTLIRSYGRA 120

Query: 121 GMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKIS 180
           GMFEHAMRTYNQM DLGTPRSAISFNALLSACNHSK FDKVPQLFDEIPKR+  SP+KIS
Sbjct: 121 GMFEHAMRTYNQMEDLGTPRSAISFNALLSACNHSKLFDKVPQLFDEIPKRFKISPDKIS 180

Query: 181 YGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMI 240
           YGILVKS+C+AGSP+KA+QIVR+ME+NGVE+T VTFTTILD+LY+KGESEEA+KIWN MI
Sbjct: 181 YGILVKSHCEAGSPQKAIQIVREMEKNGVEITAVTFTTILDSLYRKGESEEAEKIWNMMI 240

Query: 241 SKGCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDE 300
           SKGCE+DVGAYNVRLMHEHGG+PE VQ+LIEEMANSGLKPDTISYNYLMTCYCKN MIDE
Sbjct: 241 SKGCEIDVGAYNVRLMHEHGGKPEQVQSLIEEMANSGLKPDTISYNYLMTCYCKNGMIDE 300

Query: 301 AKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVE 360
           A+KVY+DME  GCNKNAATFRT IYYLCRNGE+EKGY+VFKESVKMHKIPDF+T+K LVE
Sbjct: 301 ARKVYEDMEGNGCNKNAATFRTLIYYLCRNGEFEKGYRVFKESVKMHKIPDFNTMKILVE 360

Query: 361 GLVEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADD 401
           GLVEKKKMKEAKGLIRT+RKKFPP SL AW +VEESLGLASVADD
Sbjct: 361 GLVEKKKMKEAKGLIRTVRKKFPPNSLNAWIRVEESLGLASVADD 405

[Close]

BLAST of Lsi07G002140 vs. NCBI nr
Match: XP_038876778.1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 733.0 bits (1891), Expect = 1.4e-207
Identity = 372/410 (90.73%), Postives = 390/410 (95.12%), Query Frame = 0


Query: 1   MSFSISTRHIRRLSTAATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSSVSTHY 60
           MSFSISTRHIR LSTAA     AT TTSSS++IS+AK KLRTEYDPDKAL+IYSSVS+HY
Sbjct: 1   MSFSISTRHIRHLSTAAA----ATTTTSSSLTISQAKYKLRTEYDPDKALEIYSSVSSHY 60

Query: 61  TSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEH 120
           TS VSSRYAQELT+RRLAKSRRF DIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEH
Sbjct: 61  TSPVSSRYAQELTIRRLAKSRRFGDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEH 120

Query: 121 AMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGILV 180
           AMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGILV
Sbjct: 121 AMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGILV 180

Query: 181 KSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCE 240
           KS+CDAGSPEKA+QIV+QMEENGVEVT VTFTTIL ALYKKGES+EA+KIWNKMISKGCE
Sbjct: 181 KSHCDAGSPEKAVQIVKQMEENGVEVTAVTFTTILGALYKKGESKEAEKIWNKMISKGCE 240

Query: 241 LDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKVY 300
           LDVGAYNVRLMHEHGG+PEHVQALIEEMANSGLKPDTISYNYLMTCYCKN MIDEA KVY
Sbjct: 241 LDVGAYNVRLMHEHGGKPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNGMIDEAMKVY 300

Query: 301 DDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVEK 360
           DDMEV GCNKNAATFRTFIYYLCRNGEYEKGYK+FKESVKMHKIPDF+TVKYLVEGLVEK
Sbjct: 301 DDMEVNGCNKNAATFRTFIYYLCRNGEYEKGYKIFKESVKMHKIPDFNTVKYLVEGLVEK 360

Query: 361 KKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFKDDETKT 411
           KKMKEAKGLIRTIRKKFPP++LKAWRKVEESLGLAS A +AS K+DE  T
Sbjct: 361 KKMKEAKGLIRTIRKKFPPDTLKAWRKVEESLGLASAAANASSKNDEAGT 406

[Close]

BLAST of Lsi07G002140 vs. NCBI nr
Match: KAG6577249.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 718.0 bits (1852), Expect = 4.6e-203
Identity = 365/416 (87.74%), Postives = 388/416 (93.27%), Query Frame = 0


Query: 4   SISTRHIRRLSTA----------ATAAANATATTSSSISISKAKSKLRTEYDPDKALDIY 63
           SI+TRHIRRLSTA          ATAAA ATATTSSSISISKAKSKLRTEYDPDKAL+IY
Sbjct: 3   SIATRHIRRLSTAATATATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIY 62

Query: 64  SSVSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYG 123
           SSVS+HYTS VSSRYAQELT+RRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYG
Sbjct: 63  SSVSSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYG 122

Query: 124 RAGMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNK 183
           RAGMFEHAMRTYNQM D GTPRS ISFNALL A NHSKQFDKVPQLFDEIPK+YNFSPNK
Sbjct: 123 RAGMFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNK 182

Query: 184 ISYGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNK 243
           ISYGILVKSYC++GSPEKAMQIVR+MEEN VEVT VTFTTILDALYKKGESEEA+KIWNK
Sbjct: 183 ISYGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNK 242

Query: 244 MISKGCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMI 303
           MISKGCELDVGAYNVRLMHEHGG+PEHV+ALIEEMANSG+KPDTISYNYLMTCYCKN MI
Sbjct: 243 MISKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMI 302

Query: 304 DEAKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYL 363
           DEAKKVYDDME+ GCNKNAATFRTF+YYLCRNG+YEKGY VFKESVK+HKIPD +TVKYL
Sbjct: 303 DEAKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYL 362

Query: 364 VEGLVEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFKDDETK 410
           VEGL+EKKKMKEAKGLIRTIRKKFPP+SLKAWRKVEE+LGLAS +  +S  DDET+
Sbjct: 363 VEGLMEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLASSSSSSSKADDETE 418

[Close]

BLAST of Lsi07G002140 vs. NCBI nr
Match: XP_022985077.1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 715.7 bits (1846), Expect = 2.3e-202
Identity = 363/414 (87.68%), Postives = 387/414 (93.48%), Query Frame = 0


Query: 4   SISTRHIRRLSTA--------ATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSS 63
           SI+TRHIRRLSTA        ATAA  ATATTSSSISISKAKSKLRTEYDPDKAL+IYSS
Sbjct: 3   SIATRHIRRLSTAATTTATATATAAVKATATTSSSISISKAKSKLRTEYDPDKALNIYSS 62

Query: 64  VSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 123
           VS+HYTS VSSRYAQE+T+RRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA
Sbjct: 63  VSSHYTSPVSSRYAQEITIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 122

Query: 124 GMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKIS 183
           GMFEHAMRTYNQM D GTPRSAISFNALL A NHSKQFDKVPQLFDEIPK+YNFSPNKIS
Sbjct: 123 GMFEHAMRTYNQMEDFGTPRSAISFNALLCAFNHSKQFDKVPQLFDEIPKKYNFSPNKIS 182

Query: 184 YGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMI 243
           YGILVKSYC++GSPEKAMQIVR+MEEN VEVT VTFTTILDALYKKGESEEA+KIWNKMI
Sbjct: 183 YGILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMI 242

Query: 244 SKGCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDE 303
           SKGCELDVGAYNVRLMHEHG +PEHV+ALIEEMANSG+KPDTISYNYLMTCYCKN MIDE
Sbjct: 243 SKGCELDVGAYNVRLMHEHGSKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDE 302

Query: 304 AKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVE 363
           AKKVYDDME+ GCNKNAATFRTF+YYLCRNG+YEKGY VFKESVK+HKIPD +TVKYLVE
Sbjct: 303 AKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVE 362

Query: 364 GLVEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFKDDETK 410
           GL+EKKKMKEAKGLIRTIRKKFPP+SLKAWRKVEE+LGLAS +  +S  DDET+
Sbjct: 363 GLMEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLASSSSSSSKADDETE 416

[Close]

BLAST of Lsi07G002140 vs. NCBI nr
Match: KAG7015339.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 714.9 bits (1844), Expect = 3.9e-202
Identity = 365/420 (86.90%), Postives = 387/420 (92.14%), Query Frame = 0


Query: 4   SISTRHIRRLSTAA--------------TAAANATATTSSSISISKAKSKLRTEYDPDKA 63
           SI+TRHIRRLSTAA              TAAA ATATTSSSISISKAKSKLRTEYDPDKA
Sbjct: 3   SIATRHIRRLSTAATATATATAAAKATETAAAKATATTSSSISISKAKSKLRTEYDPDKA 62

Query: 64  LDIYSSVSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLI 123
           L+IYSSVS+HYTS VSSRYAQELT+RRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLI
Sbjct: 63  LNIYSSVSSHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLI 122

Query: 124 RSYGRAGMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNF 183
           RSYGRAGMFEHAMRTYNQM D GTPRS ISFNALL A NHSKQFDKVPQLFDEIPK+YNF
Sbjct: 123 RSYGRAGMFEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYNF 182

Query: 184 SPNKISYGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADK 243
           SPNKISYGILVKSYC++GSPEKAMQIVR MEEN VEVT VTFTTILDALYKKGESEEA+K
Sbjct: 183 SPNKISYGILVKSYCESGSPEKAMQIVRGMEENDVEVTAVTFTTILDALYKKGESEEAEK 242

Query: 244 IWNKMISKGCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCK 303
           IWNKMISKGCELDVGAYNVRLMHEHGG+PEHV+ALIEEMANSG+KPDTISYNYLMTCYCK
Sbjct: 243 IWNKMISKGCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCK 302

Query: 304 NVMIDEAKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFST 363
           N MIDEAKKVYDDME+ GCNKNAATFRTF+YYLCRNG+YEKGY VFKESVK+HKIPD +T
Sbjct: 303 NGMIDEAKKVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNT 362

Query: 364 VKYLVEGLVEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFKDDETK 410
           VKYLVEGL+EKKKMKEAKGLIRTIRKKFPP+SLKAWRKVEE+LGLAS +  +S  DDET+
Sbjct: 363 VKYLVEGLMEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLASSSSSSSKADDETE 422

[Close]

BLAST of Lsi07G002140 vs. NCBI nr
Match: XP_023553152.1 (pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 713.0 bits (1839), Expect = 1.5e-201
Identity = 364/415 (87.71%), Postives = 388/415 (93.49%), Query Frame = 0


Query: 4   SISTRHIRRLSTA------ATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSSVS 63
           SI+TRHIRRLSTA      ATAAA ATATTSSSISISKAKSKLRTEYDPDKAL+IYSSVS
Sbjct: 3   SIATRHIRRLSTAATATATATAAAKATATTSSSISISKAKSKLRTEYDPDKALNIYSSVS 62

Query: 64  THYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGM 123
           +HYTS VSSRYAQELT+RRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGM
Sbjct: 63  SHYTSPVSSRYAQELTIRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGM 122

Query: 124 FEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYG 183
           FEHAMRTYNQM D GTPRS ISFNALL A NHSKQFDKVPQLFDEIPK+Y+FSPNKISYG
Sbjct: 123 FEHAMRTYNQMEDFGTPRSVISFNALLCAFNHSKQFDKVPQLFDEIPKKYSFSPNKISYG 182

Query: 184 ILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISK 243
           ILVKSYC++GSPEKAMQIVR+MEEN VEVT VTFTTILDALYKKGESEEA+KIWNKMISK
Sbjct: 183 ILVKSYCESGSPEKAMQIVREMEENDVEVTAVTFTTILDALYKKGESEEAEKIWNKMISK 242

Query: 244 GCELDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAK 303
           GCELDVGAYNVRLMHEHGG+PEHV+ALIEEMANSG+KPDTISYNYLMTCYCKN MIDEAK
Sbjct: 243 GCELDVGAYNVRLMHEHGGKPEHVEALIEEMANSGMKPDTISYNYLMTCYCKNGMIDEAK 302

Query: 304 KVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGL 363
           KVYDDME+ GCNKNAATFRTF+YYLCRNG+YEKGY VFKESVK+HKIPD +TVKYLVEGL
Sbjct: 303 KVYDDMEINGCNKNAATFRTFMYYLCRNGDYEKGYMVFKESVKVHKIPDVNTVKYLVEGL 362

Query: 364 VEKKKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVADDASFK---DDETK 410
           +EKKKMKEAKGLIRTIRKKFPP+SLKAWRKVEE+LGLAS +  +S     DDET+
Sbjct: 363 MEKKKMKEAKGLIRTIRKKFPPDSLKAWRKVEEALGLASSSSSSSSSSKADDETE 417

[Close]

BLAST of Lsi07G002140 vs. TAIR 10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 525.8 bits (1353), Expect = 3.1e-149
Identity = 268/399 (67.17%), Postives = 319/399 (79.95%), Query Frame = 0


Query: 2   SFSISTRHIRRLSTAATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSSVSTHYT 61
           S  IS R +RR ++AA A    TA +S  IS+SKAKS LR E+DPDKAL IY++VS H  
Sbjct: 3   SSRISLRLVRRFASAA-ADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSA 62

Query: 62  SHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEHA 121
           S VSSRYAQELTVRRLAK RRF DIE+LIESHKNDPKI +EPF STLIRSYG+A MF HA
Sbjct: 63  SPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHA 122

Query: 122 MRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYN-FSPNKISYGILV 181
           MRT+ QM   GTPRSA+SFNALL+AC HSK FDKVPQLFDEIP+RYN   P+KISYGIL+
Sbjct: 123 MRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILI 182

Query: 182 KSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCE 241
           KSYCD+G+PEKA++I+RQM+  G+EVTT+ FTTIL +LYKKGE E AD +WN+M+ KGCE
Sbjct: 183 KSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCE 242

Query: 242 LDVGAYNVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKVY 301
           LD  AYNVR+M      PE V+ LIEEM++ GLKPDTISYNYLMT YC+  M+DEAKKVY
Sbjct: 243 LDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVY 302

Query: 302 DDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVEK 361
           + +E   C  NAATFRT I++LC +  YE+GY +FK+SV MHKIPDF+T+K+LV GLVE 
Sbjct: 303 EGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVEN 362

Query: 362 KKMKEAKGLIRTIRKKFPPESLKAWRKVEESLGLASVAD 400
           KK  +AKGLIRT++KKFPP  L AW+K+EE LGL S  D
Sbjct: 363 KKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSKTD 400

[Close]

BLAST of Lsi07G002140 vs. TAIR 10
Match: AT2G18520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 459.1 bits (1180), Expect = 3.6e-129
Identity = 235/396 (59.34%), Postives = 301/396 (76.01%), Query Frame = 0


Query: 8   RHIRRLSTAATAAANATATTSSSISISKAKSKLRTEYDPDKALDIYSSVSTHYTSHVSSR 67
           R +RR ST AT   + T     +I++SKAKSKLR   DPDKAL IY SVS + TS +SSR
Sbjct: 9   RFLRRFST-ATGIDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSR 68

Query: 68  YAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEHAMRTYNQ 127
           YA ELTV+RLAKS+RF DIE+LIESHKN+PKI  E FLSTLIRSYGRA MF+HAM+ + +
Sbjct: 69  YAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEE 128

Query: 128 MGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRY-NFSPNKISYGILVKSYCDA 187
           M  LGTPR+ +SFNALL+AC HS  F++VPQLFDE P+RY N +P+KISYG+L+KSYCD+
Sbjct: 129 MDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDS 188

Query: 188 GSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCELDVGAY 247
           G PEKAM+I+R ME  GVEVT + FTTIL +LYK G  +EA+ +W +M++KGC+LD   Y
Sbjct: 189 GKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVY 248

Query: 248 NVRLMHEHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKVYDDMEVY 307
           NVRLM+     PE V+ L+EEM++ GLKPDT+SYNYLMT YC   M+ EAKKVY+ +E  
Sbjct: 249 NVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE-- 308

Query: 308 GCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVEKKKMKEA 367
               NAATFRT I++LC NG Y++G  VFK+S  +HKIPDF T K+L EGLV+  +M++A
Sbjct: 309 --QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA 368

Query: 368 KGLIRTIRKKFPPESLKAWRKVEESLGLASVADDAS 403
           +G+ R ++KKFPP  +  W+K+EE LGL S  + A+
Sbjct: 369 RGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAAA 399

[Close]

BLAST of Lsi07G002140 vs. TAIR 10
Match: AT1G61870.1 (pentatricopeptide repeat 336 )

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-53
Identity = 120/386 (31.09%), Postives = 218/386 (56.48%), Query Frame = 0


Query: 10  IRRLSTAATAAANATATTSSSISISKAK-SKLRTEYDPDKALDIYSSVSTHYTSHVSSRY 69
           IR LS+A+T  +  + T  +S   SKA  S L++E DPD+ L+I  + S      +  R 
Sbjct: 23  IRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRI-DRI 82

Query: 70  AQELTVRRLAKSRRFDDIESLIESH-KNDPKITQEPFLSTLIRSYGRAGMFEHAMRTYNQ 129
           A    V  LA+ + F  + +L++   +N P +  E F +  I  Y +A M +H++R +  
Sbjct: 83  AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRD 142

Query: 130 MGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGILVKSYCDAG 189
           +      R+  S NALL AC  +K + +  +++ E+PK Y   P+  +Y  ++K +C++G
Sbjct: 143 LEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESG 202

Query: 190 SPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCELDVGAYN 249
           S   +  IV +ME  G++  + +F  ++   Y + +S+E  K+   M  +G  + V  YN
Sbjct: 203 SASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYN 262

Query: 250 VRLMHE-HGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKVYDDMEVY 309
           +R+       + +  +AL++ M ++G+KP+T++Y++L+  +C     +EAKK++  M   
Sbjct: 263 IRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNR 322

Query: 310 GCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVEKKKMKEA 369
           GC  ++  + T IYYLC+ G++E    + KES++ + +P FS +K LV GL +  K++EA
Sbjct: 323 GCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEA 382

Query: 370 KGLIRTIRKKFPPESLKAWRKVEESL 393
           K LI  +++KF   +++ W +VE +L
Sbjct: 383 KELIGQVKEKF-TRNVELWNEVEAAL 406

[Close]

BLAST of Lsi07G002140 vs. TAIR 10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 5.2e-51
Identity = 117/372 (31.45%), Postives = 214/372 (57.53%), Query Frame = 0


Query: 4   SISTRHIRRLSTAATAAANATATTSSSISISKAKSKL-RTEYDPDKALDIYSSV--STHY 63
           + +T  IRR S+AAT  +  TA T++     K+ + L   E +P + ++ +     S  +
Sbjct: 11  TFNTCPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERF 70

Query: 64  TSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRAGMFEH 123
            ++++     + TVRRL  ++R   +E ++E  K    +++E F + +I  YG+AGMFE+
Sbjct: 71  RTNIA---VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFEN 130

Query: 124 AMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKISYGILV 183
           A + + +M +    RS +SFNALLSA   SK+FD V +LF+E+P + +  P+ +SY  L+
Sbjct: 131 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 190

Query: 184 KSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMISKGCE 243
           K+ C+  S  +A+ ++ ++E  G++   VTF T+L + Y KG+ E  ++IW KM+ K   
Sbjct: 191 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVA 250

Query: 244 LDVGAYNVRLMH-EHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMIDEAKKV 303
           +D+  YN RL+   +  + + +  L  E+  SGLKPD  S+N ++        +DEA+  
Sbjct: 251 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAW 310

Query: 304 YDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLVEGLVE 363
           Y ++  +G   + ATF   +  +C+ G++E   ++FKE+     +   +T++ LV+ LV+
Sbjct: 311 YKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVK 370

Query: 364 KKKMKEAKGLIR 372
             K +EA+ +++
Sbjct: 371 GSKREEAEEIVK 379

[Close]

BLAST of Lsi07G002140 vs. TAIR 10
Match: AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.8e-49
Identity = 122/385 (31.69%), Postives = 212/385 (55.06%), Query Frame = 0


Query: 5   ISTRHIRRL----STAATAAANATATTSSSISISK-----AKSKLRTEYDPDKALDIYSS 64
           +S RHIRR     S+AAT  A   +T S+ I   K     A  KL++E DP+K  +++ +
Sbjct: 2   LSLRHIRRFCHFPSSAATGIA-YVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKA 61

Query: 65  VSTHYTSHVSSRYAQELTVRRLAKSRRFDDIESLIESHKNDPKITQEPFLSTLIRSYGRA 124
            +T+    + +R+A E TV RLA + R D IE L+E  K  P+  +E F+  +I  YG+A
Sbjct: 62  NATNRLV-IENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKA 121

Query: 125 GMFEHAMRTYNQMGDLGTPRSAISFNALLSACNHSKQFDKVPQLFDEIPKRYNFSPNKIS 184
           GM + A+ T+  M   G  RS  SFNA L   + +     + +   + P +Y    + +S
Sbjct: 122 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 181

Query: 185 YGILVKSYCDAGSPEKAMQIVRQMEENGVEVTTVTFTTILDALYKKGESEEADKIWNKMI 244
           + I +KS+C+ G  + A   +R+ME++G+    VT+TT++ ALYK       + +WN M+
Sbjct: 182 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 241

Query: 245 SKGCELDVGAYNVRLMH-EHGGQPEHVQALIEEMANSGLKPDTISYNYLMTCYCKNVMID 304
            KGC+ ++  +NVR+    +  +      L+  M    ++PD+I+YN ++  +      D
Sbjct: 242 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPD 301

Query: 305 EAKKVYDDMEVYGCNKNAATFRTFIYYLCRNGEYEKGYKVFKESVKMHKIPDFSTVKYLV 364
            A++VY  M   G   N   ++T I+YLC+ G ++  Y + K+ ++    P+  TV+ L+
Sbjct: 302 MAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLL 361

Query: 365 EGLVEKKKMKEAKGLIRTIRKKFPP 380
           +GLV+K ++ +AK ++  + ++ PP
Sbjct: 362 KGLVKKGQLDQAKSIMELVHRRVPP 384

The following BLAST results are available for this feature:

BLAST of Lsi07G002140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M065	4.4e-148	67.17	Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop...	[more]
Q9ZU67	5.1e-128	59.34	Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidop...	[more]
Q8LE47	2.0e-52	31.09	Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop...	[more]
Q9LG23	7.3e-50	31.45	Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop...	[more]
Q8GW57	4.0e-48	31.69	Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop...	[more]

BLAST of Lsi07G002140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J3W0	1.1e-202	87.68	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like OS=Cuc...	[more]
A0A5D3D1X8	1.6e-201	86.27	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BX19	1.6e-201	86.27	pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Cucumis ...	[more]
A0A6J1ETZ0	1.0e-200	88.64	scarecrow-like protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111435912 PE=3 SV=1	[more]
A0A6J1C5B1	5.9e-196	86.17	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like OS=Mom...	[more]

BLAST of Lsi07G002140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876778.1	1.4e-207	90.73	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Benin...	[more]
KAG6577249.1	4.6e-203	87.74	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022985077.1	2.3e-202	87.68	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucur...	[more]
KAG7015339.1	3.9e-202	86.90	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023553152.1	1.5e-201	87.71	pentatricopeptide repeat-containing protein At4g36680, mitochondrial-like [Cucur...	[more]

BLAST of Lsi07G002140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36680.1	3.1e-149	67.17	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G18520.1	3.6e-129	59.34	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G61870.1	1.4e-53	31.09	pentatricopeptide repeat 336	[more]
AT1G55890.1	5.2e-51	31.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80150.1	2.8e-49	31.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 151..251 e-value: 3.0E-27 score: 97.1 coord: 6..150 e-value: 1.1E-10 score: 43.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 252..405 e-value: 4.1E-27 score: 97.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 137..184 e-value: 1.3E-7 score: 31.7 coord: 207..248 e-value: 1.6E-9 score: 37.8 coord: 275..323 e-value: 7.9E-10 score: 38.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 106..132 e-value: 1.3E-5 score: 23.1 coord: 138..172 e-value: 7.0E-5 score: 20.7 coord: 314..342 e-value: 2.0E-4 score: 19.3 coord: 209..243 e-value: 2.2E-8 score: 31.8 coord: 174..207 e-value: 5.9E-8 score: 30.4 coord: 278..310 e-value: 2.8E-7 score: 28.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 106..132 e-value: 2.7E-4 score: 21.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 207..241 score: 11.016164
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 172..206 score: 11.816339
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 311..345 score: 9.152743
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 276..310 score: 11.180584
None	No IPR available	PANTHER	PTHR46128:SF14	BNAA09G52830D PROTEIN	coord: 7..400
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 7..400

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G002140.1	Lsi07G002140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding