Lsi07G001890 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G001890
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Transcription termination factor MTERF5
Location	chr07: 2061543 .. 2062718 (-)
RNA-Seq Expression	Lsi07G001890
Synteny	Lsi07G001890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTAAATCGTCCTTCCCTCCTCCGAATTCATCCGTTCTTGTATTATTTCTTCTCTTCTTCTTCCCACACCCAAGCCTCTGCTTCAAATGGAATCGTCGTCCAATACCTCATCGATAACTTCCAACTGTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGACGCTCACATTCAATCGGCCATTCGAATCGCGCCGCAGATCGCGTTTTCCAGTATTGAAAAGACTCTGAAGCCGAAGATCGACTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTGACTGTTAGTTTGGAGAAGAACTTGATGCCCAGTGTTGAGATTCTTAAGAATTTTTTCCCCGAGGATAAGTGTAATAGTGATCTCCTGTTTGCTATCCGGCGATGTTCTTATACGCTTATGATAGCCCCGTATAAAAGGTTGTCGGTAAATATTAATTACTTACGAAGTTGTGGGATTGTTGATTCTCAAATCTCTATGTTACTGAAGAGGCAACCTGGACTTTTTGGTAAGCGTGAATCTCAACTTAGAGATATTGTTTCCATGGTTGTAGACACTGGTTTTTCTACGAATACTAAAATGTTTGCTCATGGACTTCATGCTATCGGTTCTGTAAGTAATGCGACCTTTAACAAGAAAGTGGAGTTGATTTGTAGCTTTGGAATAAGTGAGAAAGAATGTATGAGAATGATTACTTCTGCTCCTGTTTTGATAAGGACTTCCATTGGTAAACTTAAGTCTGGTCTAGAATTCTTCATGAATGAGGCAAAAGTTAGCAAATCAGATATTGTTCGTAAACCTTCTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGTTATAGAGTTCTAGAGGTTGTGAAGTCGAAGAGGCTATTGAAGAAGCAACCGAAATTTATCCATATATTGGGGATGTCTGATCAGGATTTCTTGGATAAATTCGTGTGTAGGTTTCCTGATAATATGAAAGATTTGTTGGTGGCCTTTAGAGGTAATTCTGTAGGTGAATTGCAGCCTAAGGAGTTAGCAACATGA

mRNA sequence

ATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTAAATCGTCCTTCCCTCCTCCGAATTCATCCGTTCTTGTATTATTTCTTCTCTTCTTCTTCCCACACCCAAGCCTCTGCTTCAAATGGAATCGTCGTCCAATACCTCATCGATAACTTCCAACTGTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGACGCTCACATTCAATCGGCCATTCGAATCGCGCCGCAGATCGCGTTTTCCAGTATTGAAAAGACTCTGAAGCCGAAGATCGACTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTGACTGTTAGTTTGGAGAAGAACTTGATGCCCAGTGTTGAGATTCTTAAGAATTTTTTCCCCGAGGATAAGTGTAATAGTGATCTCCTGTTTGCTATCCGGCGATGTTCTTATACGCTTATGATAGCCCCGTATAAAAGGTTGTCGGTAAATATTAATTACTTACGAAGTTGTGGGATTGTTGATTCTCAAATCTCTATGTTACTGAAGAGGCAACCTGGACTTTTTGGTAAGCGTGAATCTCAACTTAGAGATATTGTTTCCATGGTTGTAGACACTGGTTTTTCTACGAATACTAAAATGTTTGCTCATGGACTTCATGCTATCGGTTCTGTAAGTAATGCGACCTTTAACAAGAAAGTGGAGTTGATTTGTAGCTTTGGAATAAGTGAGAAAGAATGTATGAGAATGATTACTTCTGCTCCTGTTTTGATAAGGACTTCCATTGGTAAACTTAAGTCTGGTCTAGAATTCTTCATGAATGAGGCAAAAGTTAGCAAATCAGATATTGTTCGTAAACCTTCTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGTTATAGAGTTCTAGAGGTTGTGAAGTCGAAGAGGCTATTGAAGAAGCAACCGAAATTTATCCATATATTGGGGATGTCTGATCAGGATTTCTTGGATAAATTCGTGTGTAGGTTTCCTGATAATATGAAAGATTTGTTGGTGGCCTTTAGAGGTAATTCTGTAGGTGAATTGCAGCCTAAGGAGTTAGCAACATGA

Coding sequence (CDS)

ATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTAAATCGTCCTTCCCTCCTCCGAATTCATCCGTTCTTGTATTATTTCTTCTCTTCTTCTTCCCACACCCAAGCCTCTGCTTCAAATGGAATCGTCGTCCAATACCTCATCGATAACTTCCAACTGTCCCCCGCCAGAGCGGTGTCGATTATGAGCAGCCGTAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGACGCTCACATTCAATCGGCCATTCGAATCGCGCCGCAGATCGCGTTTTCCAGTATTGAAAAGACTCTGAAGCCGAAGATCGACTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTGACTGTTAGTTTGGAGAAGAACTTGATGCCCAGTGTTGAGATTCTTAAGAATTTTTTCCCCGAGGATAAGTGTAATAGTGATCTCCTGTTTGCTATCCGGCGATGTTCTTATACGCTTATGATAGCCCCGTATAAAAGGTTGTCGGTAAATATTAATTACTTACGAAGTTGTGGGATTGTTGATTCTCAAATCTCTATGTTACTGAAGAGGCAACCTGGACTTTTTGGTAAGCGTGAATCTCAACTTAGAGATATTGTTTCCATGGTTGTAGACACTGGTTTTTCTACGAATACTAAAATGTTTGCTCATGGACTTCATGCTATCGGTTCTGTAAGTAATGCGACCTTTAACAAGAAAGTGGAGTTGATTTGTAGCTTTGGAATAAGTGAGAAAGAATGTATGAGAATGATTACTTCTGCTCCTGTTTTGATAAGGACTTCCATTGGTAAACTTAAGTCTGGTCTAGAATTCTTCATGAATGAGGCAAAAGTTAGCAAATCAGATATTGTTCGTAAACCTTCTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGTTATAGAGTTCTAGAGGTTGTGAAGTCGAAGAGGCTATTGAAGAAGCAACCGAAATTTATCCATATATTGGGGATGTCTGATCAGGATTTCTTGGATAAATTCGTGTGTAGGTTTCCTGATAATATGAAAGATTTGTTGGTGGCCTTTAGAGGTAATTCTGTAGGTGAATTGCAGCCTAAGGAGTTAGCAACATGA

Protein sequence

MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARAVSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLMIAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKMFAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMNEAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNMKDLLVAFRGNSVGELQPKELAT

Homology

[Close]

BLAST of Lsi07G001890 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 7.5e-12
Identity = 58/241 (24.07%), Postives = 112/241 (46.47%), Query Frame = 0


Query: 101 PQIAFSSIEKTLKPKIDFFQNLGLVGSD---LGKFISRHSSLLTVSLEKNLMPSVEILKN 160
           P I  S ++  L P++DF +NL   G D    G  + R  ++L+ S+E ++   VE LK+
Sbjct: 239 PVILNSDLDSQLIPRVDFIRNLS--GEDDFATGTVLRRLPAILSYSVE-HMNGQVEFLKS 298

Query: 161 FFPEDKCNSDLLFAIRRC-SYTLMIAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFG 220
           F       S+ +F I       +  +  ++L   I +L+ CG     +   L + P +  
Sbjct: 299 F---AGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILA 358

Query: 221 KRESQLRDIVSMVVDTGFSTNTKMFAHGLHAIGSVSNATFNKKVELICSFGISEKECMRM 280
             E+ L   +  +V  G+   TK  A  + A+   S+    + + L  S+G+S ++ + M
Sbjct: 359 LSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAM 418

Query: 281 ITSAPVLIRTSIGKLKSGLEFFMNEAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKS 338
            T  P +++ +   L+  LE+ +        +++  P+ L + +  R+  RY   E +KS
Sbjct: 419 STKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYE--EKLKS 471

[Close]

BLAST of Lsi07G001890 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06
Identity = 61/302 (20.20%), Postives = 122/302 (40.40%), Query Frame = 0


Query: 82  YLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGSDLGKFISRHSSLLT 141
           YL  +G     I+  +   PQI   ++E  LK  I F   LG+  S +G+ ++   SL +
Sbjct: 225 YLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFS 284

Query: 142 VSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLMIAPYKRLSV--NINYL---RS 201
            S+E +L P++  L     E       +  + + S  +++   +RL +  N  Y+   + 
Sbjct: 285 YSVENSLRPTIRYL---IEEVGIKETDVGKVVQLSPQILV---QRLDITWNTRYMFLSKE 344

Query: 202 CGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKMFAHGLHAIGSVSNATF 261
            G     +  ++K+ P            ++   +D GF                      
Sbjct: 345 LGAPRDSVVKMVKKHP-----------QLLHYSIDDGFL--------------------- 404

Query: 262 NKKVELICSFGISEKECMRMITSAPVLIRTSI-GKLKSGLEFFMNEAKVSKSDIVRKPSC 321
             ++  + S G+   + ++++TS   ++  S+   LK    + +NE       + + P  
Sbjct: 405 -PRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMY 464

Query: 322 LMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNMKDLLVA 378
           L  ++  R+ PR+R L  +K    ++K P  +  L  +D+ F  ++         D  +A
Sbjct: 465 LSLSLDQRIRPRHRFLVELKK---VRKGPFPLSSLVPNDESFCQQWA----GTSVDTYLA 480

[Close]

BLAST of Lsi07G001890 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.2e-05
Identity = 40/147 (27.21%), Postives = 65/147 (44.22%), Query Frame = 0


Query: 74  EKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGL-VGSDLGKF 133
           EK   +  +   LG  +  +   I   P++   SI+  L   + F  +LGL     +GK 
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 134 ISRHSSLLTVSLEKNLMPSVEILKNF--FPEDKCNSDLLFAIRRCSYTLMIAPYKRLSVN 193
           + ++  L+  S++K L P+ E LK+     ED   S     +      L     K L  N
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKS----VVMNFPQLLCRDVNKILKPN 231

Query: 194 INYLRSCGIVDSQISMLLKRQPGLFGK 218
            +YL+ CG  DSQI+ ++   P +  K
Sbjct: 232 YDYLKECGFGDSQIATMVTGYPQILIK 254

[Close]

BLAST of Lsi07G001890 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 6.8e-05
Identity = 30/89 (33.71%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 73  TEKPQS----VYKYLS-ELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGS 132
           T  P+S    V ++LS E+  S+  I  +I   P++  SS++  L+P + F + LG VG 
Sbjct: 94  TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 153

Query: 133 DLGKFISRHSSLLTVSLEKNLMPSVEILK 157
           D     SR++ LL  ++E+ L+P +E L+
Sbjct: 154 D--TITSRNTVLLVSNVERTLIPKIEYLE 180

[Close]

BLAST of Lsi07G001890 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.5e-04
Identity = 40/155 (25.81%), Postives = 64/155 (41.29%), Query Frame = 0


Query: 69  GIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGSD 128
           G    E+ + + KY   LG     ++  + + P +    +EKT+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLMIAPYKRLS 188
           +G  + +  SLLT SL K + P V  L           D+   I      L  +   +L 
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFL--LTRAGVTQKDIGKVIAMDPALLGCSIGTKLE 500

Query: 189 VNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLR 224
            N+ Y  S GI   Q+  ++   P L       LR
Sbjct: 501 PNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLR 533

[Close]

BLAST of Lsi07G001890 vs. ExPASy TrEMBL
Match: A0A6J1JB80 (uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.6e-174
Identity = 316/391 (80.82%), Postives = 351/391 (89.77%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARA 60
           MYALR SFS+SSR N PSLLRI P LY FFSSSSH+QASAS GIVVQYLID F+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQ 120
           VSIMSSRRGI STEKPQSVYKYLSELGFS+AHIQS IR+APQIAFS+IEKTLKPKI+FFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLM 180
           NLGLVGSDLG+FIS+HS+LLT+SLEK LMPSVEILK+ FP+D+CNSDLL  +RRCS  LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 IAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKM 240
            +PY RL VNINYL+SCGIV SQ+SMLLKRQP LFG RESQ+RD+VSMVV+TGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMN 300
           F HGLHAI SVSNATF KKVELICSFGI+EKECMRM TSAPVLIRTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDK 360
           EA+VS+SDIVRKP+CLMHAMQGRVLPRYRVL+VV SKRL KK  + I ILGMSD++FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVCRFPDNMKDLLVAFRGNSVGELQPKELAT 392
           FV RFPD++ +LL AFRG  + ELQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Lsi07G001890 vs. ExPASy TrEMBL
Match: A0A6J1END2 (uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC111436067 PE=3 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 2.3e-173
Identity = 315/391 (80.56%), Postives = 350/391 (89.51%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARA 60
           MYALR SFS+SSR N  SLLRI P LY FFSSSSH+QASAS GIVVQYLID F+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQ 120
           VSIM SRRGIESTEKPQSVYKYLSELGFS AHIQS IR+APQIAFS+IEKTLKPKI+FFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLM 180
           N GLVGSDLG+FIS+HS+LLTVSLEK LMPSVEILK+ FP+D+CNSDLL  ++RC   LM
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 IAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKM 240
            +PY RL VNINYL+SCGIV SQ+SMLLKRQP LFGKRESQ+R+IVSMVV+TGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMN 300
           F HGLHAI SV+NATF KKVELICSFGI+EKECMRM TSAPVLIRTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDK 360
           EA+VS+SDIVRKP+CLMHAMQGRVLPRYRVL+VVKSK LLKK P+ + ILGMSD+DFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVCRFPDNMKDLLVAFRGNSVGELQPKELAT 392
           FV RFPD++ +LL AFRG  + ELQPK+L T
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of Lsi07G001890 vs. ExPASy TrEMBL
Match: A0A6J1EN21 (uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC111435860 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 4.3e-172
Identity = 313/391 (80.05%), Postives = 350/391 (89.51%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARA 60
           MYALR SFS+SSR N  SLLRI P LY FFSSSSH+QASAS GIVVQYLID F+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQ 120
           VSIM SRRG+ESTEKPQSVYKYLSELGFS AHIQS IR+APQIAFS+IE+TLKPKI+FFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLM 180
           NLGLVGSDLG+FIS+HS+LLTVSLEK LMPSVEILK+ FP+D+CNSDLL  ++RCS  LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 IAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKM 240
            +PY RL VNI+YL+SCGIV SQ+SMLLKRQP LFG RESQ+RDIVSMVV+TGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMN 300
           F HGLH+I SVSNATF KKVELICSFGI+EKECMRM TSAP LIRTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDK 360
           EA+VS+SDIV KP+CLMHAMQGRVLPRYRVL+VVKSKRLL+K P+ + ILGMSD+DFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

Query: 361 FVCRFPDNMKDLLVAFRGNSVGELQPKELAT 392
           FV RFPD++ +LL AFRG  + ELQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Lsi07G001890 vs. ExPASy TrEMBL
Match: A0A6J1J5Y4 (uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.8e-171
Identity = 313/387 (80.88%), Postives = 344/387 (88.89%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARA 60
           MYALR SFS+SSR N PSLLRI P LY FFSSSSH+QASAS GIVVQYLID F+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQ 120
           VSIMSSRRGI STEKPQSVYKYLSELGFS+AHIQS IR+APQIAFS+IEKTLKPKI+FFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLM 180
           NLGLVGSDLG FIS+HS+LLT+SLEK LMPSVEILK+ FP+D+CNSD L  +RRCS  L 
Sbjct: 121 NLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLK 180

Query: 181 IAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKM 240
            +PY RL VNINYL+SCGIV SQ+SMLLKRQP LFG RESQ+RDIVSMVV+TGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMN 300
           F HGLHAI SVSNATF KKVELICSFGI+EKECMRM TSAPVLIRTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDK 360
           EA+VS+SDIVRKP+CLMHAMQGRVLPRYRVL+VV SKRL KK  + I ILGMSD++FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVCRFPDNMKDLLVAFRGNSVGELQPK 388
           FV RFPD + +LL AFRG  + ELQPK
Sbjct: 361 FVHRFPDQVTELLAAFRGQCMDELQPK 387

[Close]

BLAST of Lsi07G001890 vs. ExPASy TrEMBL
Match: A0A6J1C8W1 (uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008506 PE=3 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 3.1e-154
Identity = 289/391 (73.91%), Postives = 332/391 (84.91%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFF-SSSSHTQASASNGIVVQYLIDNFQLSPAR 60
           MYALR  FS+S+R   P    I P L YFF SSSS  +ASA+N IVVQYL+DNF LS AR
Sbjct: 1   MYALRSIFSLSARHCHP----IDPPLCYFFSSSSSRREASAANAIVVQYLVDNFNLSTAR 60

Query: 61  AVSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFF 120
           A++IMS R+G+ESTEKP+SV KYLSELGFSDAHIQSAIRI+PQIAFSS+EKTLKPKI+FF
Sbjct: 61  ALAIMSCRKGVESTEKPRSVCKYLSELGFSDAHIQSAIRISPQIAFSSVEKTLKPKIEFF 120

Query: 121 QNLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTL 180
           QNLGLVGSDLGKFIS HSSLLTVSL+  L PSVEILKN FP+D+ NS+LL  +RRCS  L
Sbjct: 121 QNLGLVGSDLGKFISNHSSLLTVSLKNKLRPSVEILKNVFPKDEDNSNLLQVMRRCSDIL 180

Query: 181 MIAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTK 240
           M  P  RL VNINY RSCGIVDSQ+SMLLKRQP LFG+RES++RD+VSM V+TGFSTNTK
Sbjct: 181 MRCPESRLLVNINYFRSCGIVDSQLSMLLKRQPVLFGRRESRVRDLVSMAVETGFSTNTK 240

Query: 241 MFAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFM 300
           MF HGLHAI SVSNATF KKVELICSFG +EKECM+M TSAPVLIRTSI KLK+G+EFFM
Sbjct: 241 MFVHGLHAISSVSNATFKKKVELICSFGFTEKECMKMFTSAPVLIRTSIAKLKTGIEFFM 300

Query: 301 NEAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLD 360
           NEAKVS+S IVR+P+ LMH+MQGRVLPRYRVL+VVKSKRL +K P+ +  LG+S++DF D
Sbjct: 301 NEAKVSRSLIVRRPTSLMHSMQGRVLPRYRVLQVVKSKRLTRKNPELVDTLGISEEDFFD 360

Query: 361 KFVCRFPDNMKDLLVAFRGNSVGELQPKELA 391
           KFV RFPDN++DLLVA+ G  V  L+ KELA
Sbjct: 361 KFVYRFPDNVEDLLVAYSGQCVDALRRKELA 387

[Close]

BLAST of Lsi07G001890 vs. NCBI nr
Match: KAG7015351.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 622.5 bits (1604), Expect = 2.5e-174
Identity = 317/391 (81.07%), Postives = 352/391 (90.03%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARA 60
           MYALR SFS+SSR N  SLLRI P LY FFSSSSH+QASAS GIVVQYLID F+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQ 120
           VSIM SRRGI+STEKPQSVYKYLSELGFS AHIQS IR+APQIAFS+IE+TLKPKI+FFQ
Sbjct: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLM 180
           NLGLVGSDLG+FIS+HS+LLTVSLEK LMPSVEILK+ FP+D+CNSDLL  ++RCS  LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180

Query: 181 IAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKM 240
            +PY RL VNINYL+SCGIV SQ+SMLLKRQP LFGKRESQ+RDIVSMVV+TGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMN 300
           F HGLHAI SV+NATF KKVELICSFGI+EKECMRM TSAPVLIRTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDK 360
           EA+VS+SDIVRKP+CLMHAMQGRVLPRYRVL+VVKSK LLKK P+ + ILGMSD+DFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVCRFPDNMKDLLVAFRGNSVGELQPKELAT 392
           FV RFPD++ +LL AFRG  + ELQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Lsi07G001890 vs. NCBI nr
Match: XP_022984673.1 (uncharacterized protein LOC111482884 isoform X1 [Cucurbita maxima] >XP_022984674.1 uncharacterized protein LOC111482884 isoform X2 [Cucurbita maxima] >XP_022984675.1 uncharacterized protein LOC111482884 isoform X3 [Cucurbita maxima])

HSP 1 Score: 620.9 bits (1600), Expect = 7.3e-174
Identity = 316/391 (80.82%), Postives = 351/391 (89.77%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARA 60
           MYALR SFS+SSR N PSLLRI P LY FFSSSSH+QASAS GIVVQYLID F+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQ 120
           VSIMSSRRGI STEKPQSVYKYLSELGFS+AHIQS IR+APQIAFS+IEKTLKPKI+FFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLM 180
           NLGLVGSDLG+FIS+HS+LLT+SLEK LMPSVEILK+ FP+D+CNSDLL  +RRCS  LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 IAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKM 240
            +PY RL VNINYL+SCGIV SQ+SMLLKRQP LFG RESQ+RD+VSMVV+TGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMN 300
           F HGLHAI SVSNATF KKVELICSFGI+EKECMRM TSAPVLIRTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDK 360
           EA+VS+SDIVRKP+CLMHAMQGRVLPRYRVL+VV SKRL KK  + I ILGMSD++FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVCRFPDNMKDLLVAFRGNSVGELQPKELAT 392
           FV RFPD++ +LL AFRG  + ELQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Lsi07G001890 vs. NCBI nr
Match: XP_038888519.1 (transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 619.8 bits (1597), Expect = 1.6e-173
Identity = 316/384 (82.29%), Postives = 343/384 (89.32%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFF---SSSSHTQASASNGIVVQYLIDNFQLSP 60
           MYALRPSFSVSSRLN PS LRIHPFLYYFF   SSSSHTQ+SASN IVVQYLID FQLSP
Sbjct: 1   MYALRPSFSVSSRLNPPSFLRIHPFLYYFFSSSSSSSHTQSSASNAIVVQYLIDTFQLSP 60

Query: 61  ARAVSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKID 120
           ARA SIMS RRG++STEKPQSVYKYLS+LGFSDAHI+SAIR+APQIAFS+IEKTLKPKI+
Sbjct: 61  ARAASIMSCRRGLQSTEKPQSVYKYLSDLGFSDAHIRSAIRLAPQIAFSNIEKTLKPKIE 120

Query: 121 FFQNLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSY 180
           FFQNLGLVGSDL KFISRHS+LLTVSLEK LMPSVEILKN  P+D CN DLL  IRR S 
Sbjct: 121 FFQNLGLVGSDLSKFISRHSTLLTVSLEKKLMPSVEILKNILPKDNCNDDLLLVIRRWSD 180

Query: 181 TLMIAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTN 240
            LM  P KRLS+NINYL+SCGIVDSQ+ MLLKRQ  LFG+ ES+L+DIVS+VV+ GFSTN
Sbjct: 181 RLMRTPCKRLSININYLQSCGIVDSQLLMLLKRQSSLFGRSESRLKDIVSVVVEIGFSTN 240

Query: 241 TKMFAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEF 300
           T+MF HGLHAI SVS  T  KKVELICSFGI+EKECMRM TSAPVLIRTSIGKLK GLEF
Sbjct: 241 TRMFVHGLHAISSVSKVTLKKKVELICSFGITEKECMRMFTSAPVLIRTSIGKLKLGLEF 300

Query: 301 FMNEAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDF 360
           FMNEAKVSKSDIV  P+CLMHAMQGRVLPRYRVL++VKSKRL+KK PKFI  LGMSD+DF
Sbjct: 301 FMNEAKVSKSDIVGSPACLMHAMQGRVLPRYRVLQIVKSKRLMKKHPKFILTLGMSDEDF 360

Query: 361 LDKFVCRFPDNMKDLLVAFRGNSV 382
           LD+FVCRFPDNMKDLLVA+RGNSV
Sbjct: 361 LDRFVCRFPDNMKDLLVAYRGNSV 384

[Close]

BLAST of Lsi07G001890 vs. NCBI nr
Match: XP_022929526.1 (uncharacterized protein LOC111436067 [Cucurbita moschata])

HSP 1 Score: 618.2 bits (1593), Expect = 4.8e-173
Identity = 315/391 (80.56%), Postives = 350/391 (89.51%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARA 60
           MYALR SFS+SSR N  SLLRI P LY FFSSSSH+QASAS GIVVQYLID F+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQ 120
           VSIM SRRGIESTEKPQSVYKYLSELGFS AHIQS IR+APQIAFS+IEKTLKPKI+FFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLM 180
           N GLVGSDLG+FIS+HS+LLTVSLEK LMPSVEILK+ FP+D+CNSDLL  ++RC   LM
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 IAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKM 240
            +PY RL VNINYL+SCGIV SQ+SMLLKRQP LFGKRESQ+R+IVSMVV+TGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMN 300
           F HGLHAI SV+NATF KKVELICSFGI+EKECMRM TSAPVLIRTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDK 360
           EA+VS+SDIVRKP+CLMHAMQGRVLPRYRVL+VVKSK LLKK P+ + ILGMSD+DFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVCRFPDNMKDLLVAFRGNSVGELQPKELAT 392
           FV RFPD++ +LL AFRG  + ELQPK+L T
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of Lsi07G001890 vs. NCBI nr
Match: XP_023552362.1 (uncharacterized protein LOC111810052 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 618.2 bits (1593), Expect = 4.8e-173
Identity = 317/391 (81.07%), Postives = 349/391 (89.26%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNRPSLLRIHPFLYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARA 60
           MYALR SFS+SSR N  SLLRI P LY FFSSSSH+QASAS GIVVQYLID F+LSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSSRRGIESTEKPQSVYKYLSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQ 120
           VSIM SRRGIESTEKPQSVYKYLSELGFS AHIQS IR+APQIAFS+IEKTLKPKI+FFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSSLLTVSLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLM 180
           NLGLVGSDLG+FIS+HS+LLTVSLEK LMPSVEIL++ FP+D+CNSDLL  ++RC   LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 IAPYKRLSVNINYLRSCGIVDSQISMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKM 240
             PY RL VNINYL+SCGIV SQ+SMLLKRQP LFGKRESQ+RDIVSMVV+TGFSTNTKM
Sbjct: 181 RFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FAHGLHAIGSVSNATFNKKVELICSFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMN 300
           F HGLHAI SV+NATF KKVELICSFGI+EKECMRM TSAPVLIRTS GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMN 300

Query: 301 EAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQPKFIHILGMSDQDFLDK 360
           EA+VS+SDIVRKP+CLMHAM+GRVLPRYRVL+VVKSKRLL K P+ I ILGMSD+DFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDK 360

Query: 361 FVCRFPDNMKDLLVAFRGNSVGELQPKELAT 392
           FV RFPD++ +LL AFRG  + ELQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Lsi07G001890 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 246.5 bits (628), Expect = 3.5e-65
Identity = 141/358 (39.39%), Postives = 226/358 (63.13%), Query Frame = 0


Query: 26  LYYFFSSSSHTQASASNGIVVQYLIDNFQLSPARAVSIMSSRRGIESTEKPQSVYKYLSE 85
           L++F  SS+ T AS SN   V++L DN    P  A++I      ++S E+P+SV + L  
Sbjct: 24  LHHF--SSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVIQMLKS 83

Query: 86  LGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGSDLGKFISRHSSLLTVSLE 145
             FSD  IQ +IR+ P++ F ++EK L+PK+ FF+++G  GS LGKF+S++SS++ VSL 
Sbjct: 84  YSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLV 143

Query: 146 KNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLMIA-PYKRLSVNINYLRSCGIVDSQI 205
           K L+P+VEILK+       + DL   + RC + L+   P   L  NI+YL +CGIV SQ+
Sbjct: 144 KKLIPTVEILKSIVAPK--HEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQL 203

Query: 206 SMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKMFAHGLHAIGSVSNATFNKKVELIC 265
           + LL+RQP +F   E +LR  VS  +D GF+ N++M  H + ++ S+S  TF++KV+L  
Sbjct: 204 ASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFM 263

Query: 266 SFGISEKECMRMITSAPVLIRTSIGKLKSGLEFFMNEAKVSKSDIVRKPSCLMHAMQGRV 325
           + G SE E   +I  +P LIR S  KL  G EF++    + +  + ++P  L + ++ RV
Sbjct: 264 ANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRV 323

Query: 326 LPRYRVLEVVKSKRLL----KKQPKFIHILGMSDQDFLDKFVCRFPDNM-KDLLVAFR 378
           +PR +VL++++ K LL    KK+   + I+ M+++ FL+K+V RF D + ++LLVA++
Sbjct: 324 IPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYK 376

[Close]

BLAST of Lsi07G001890 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 156.4 bits (394), Expect = 4.8e-38
Identity = 104/350 (29.71%), Postives = 171/350 (48.86%), Query Frame = 0


Query: 31  SSSSHTQASASNGIVVQYLIDNFQLSPARAVSIMSSRRGIESTEKPQSVYKYLSELGFSD 90
           S +   Q        V YL+D+  LS   A S  S    + S++KP SV     + GF++
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKS-NSRFVKLVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGSDLGKFISRHSSLLTVSLEKNLMP 150
             I S I+  P++   S E  + PK+ FF ++G   SD  K IS    +L+ SL K L+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKNFFPEDKCNSDLLFAIRRCSYTLMIAPYKRLSVNINYLRSCGIVDSQISMLLKR 210
             + LK+   E++     L    RC ++L I     +S+ ++  R  G+ D  I  L++ 
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRC-FSLKIT--HCVSLRVSICRELGVPDKSIKWLVQA 223

Query: 211 QPGLFGKRESQLRDIVSMVVDTGFSTNTKMFAHGLHAIGSVSNATFNKKVELICSFGISE 270
            P  F  RE +  ++++ V   GF      F H + A    S +   +K +L   FG S+
Sbjct: 224 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 283

Query: 271 KECMRMITSAPVLIRTSIGKLKSGLEFFMNEAKVSKSDIVRKPSCLMHAMQGRVLPRYRV 330
           ++ +  I   P  +  S  K+   LE+ +N   +   DIV +P  L  +M+ R+ PR +V
Sbjct: 284 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 343

Query: 331 LEVVKSKRLLKKQP-KFIHILGMSDQDFLDKFVCRFPDNMKDLLVAFRGN 380
           + ++ SK L+KK+   +  IL +   +F+DKFV ++ D M  L+  F  N
Sbjct: 344 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of Lsi07G001890 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 98/397 (24.69%), Postives = 159/397 (40.05%), Query Frame = 0


Query: 30  FSSSSHTQASASNG-----IVVQYLIDNFQLSPARAVSIMSSRRGIESTEKPQSVYKYLS 89
           FSS+     S  +G       V YL+D+  LS   A SI S +   E    P SV     
Sbjct: 34  FSSARAADVSIRDGRKGKNFTVSYLVDSLGLSKKLAESI-SRKVSFEDKVNPDSVLSLFR 93

Query: 90  ELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGSDLGKFISRHSSLLTVSL 149
             GF+D+ I + I   P +  +  +K L  K+   Q+ G   S++ + +S    +L    
Sbjct: 94  SYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILG--- 153

Query: 150 EKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLMIAPYKRLSVNINYLRSCGIVDSQI 209
           +K++    + +K          D++ A    SY L          N++ LR  G+    +
Sbjct: 154 KKSITVYYDAVK----------DIIVADTSSSYELPQGSQGNKIRNVSALRELGMPSRLL 213

Query: 210 SMLL--KRQPGLFGKRESQLRDIVSMVVDTGFSTNTKMFAHGLHAIGSVSNATFNKKV-- 269
             LL  K QP + GK        +  VV+ GF   T  F   L  +  +S  T  +KV  
Sbjct: 214 LPLLVSKSQP-VCGKENFDAS--LKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVV 273

Query: 270 ---------------------------------ELICSFGISEKECMRMITSAPVLIRTS 329
                                            E     G S  E + M+   P  I  S
Sbjct: 274 FRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYS 333

Query: 330 IGKLKSGLEFFMNEAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKK---QP 382
           +  +K   EF + + K  ++ +V  P    ++M+ R++PR  +LE + SK LL+K    P
Sbjct: 334 VESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELP 393

[Close]

BLAST of Lsi07G001890 vs. TAIR 10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 96.3 bits (238), Expect = 5.9e-20
Identity = 95/398 (23.87%), Postives = 167/398 (41.96%), Query Frame = 0


Query: 29  FFSSSSHTQASASNG-----IVVQYLIDNFQLSPARAVSIMSSRRGIESTEKPQSVYKYL 88
           F SS+     S+ +G       V YL+D+  L+   A SI S +   ++   P SV   L
Sbjct: 37  FSSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESI-SMKVSFDNKGNPDSVLSLL 96

Query: 89  SELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGSDLGKFISRHSSLLTVS 148
              GF+D+ I + IR  P++     EK+L PK+ F Q++G   S+L + +S    +L   
Sbjct: 97  RSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKR 156

Query: 149 LEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLMIAPYKRLSV-NINYLRSCGIVDS 208
             K+L    + +K     DK +      + +  ++L     +   + N+  LR  G+   
Sbjct: 157 KGKSLSRYYDFVKVIIEADKSSK-----LEKLCHSLPEGSKQENKIRNLLVLREMGVPQR 216

Query: 209 QI-SMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKMFAHGLHAIGSVSN-------- 268
            + S+L+     + GK   + ++ +   V+ GF   T  F   L+ +  +S+        
Sbjct: 217 LLFSLLISDAGDVCGK--EKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFN 276

Query: 269 -------------ATFNK--------------KVELICSFGISEKECMRMITSAPVLIRT 328
                        A F K               VE     G S  E + M+   P  I  
Sbjct: 277 ACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGY 336

Query: 329 SIGKLKSGLEFFMNEAKVSKSDIVRKPSCLMHAMQGRVLPRYRVLEVVKSKRLLKKQ-PK 382
           S   +K+  EF + E       +   P  L ++++ R +PR  V++V+ SK LL+ + P 
Sbjct: 337 STELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPP 396

[Close]

BLAST of Lsi07G001890 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 92.0 bits (227), Expect = 1.1e-18
Identity = 96/433 (22.17%), Postives = 174/433 (40.18%), Query Frame = 0


Query: 24  PFLYYFFSSSSHTQASASNG-IVVQYLIDNFQLSPARAVSIMSSRRGIESTEKPQSVYKY 83
           PF    FSS+    +S       V YL+++  L+   A +I S +   E    P SV   
Sbjct: 32  PFTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETI-SKKVTFEDKVNPDSVLNL 91

Query: 84  LSELGFSDAHIQSAIRIAPQIAFSSIEKTLKPKIDFFQNLGLVGSDLGKFISRHSSLLTV 143
           L   GF D+ I   IR  P++  +  EK+L+PK+ F ++ G   S++ + +S   ++L  
Sbjct: 92  LRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDK 151

Query: 144 SLEKNLMPSVEILKNFFPEDKCNSDLLFAIRRCSYTLMIAPYKRLS--VNINYLRSCGIV 203
             E+++    + +K+   + K            S  +     K+ +   NI+ LR  G+ 
Sbjct: 152 KGEESVSLYYDFVKDIMQDGK------------SLCISCPEGKKGNRIRNISVLRELGVP 211

Query: 204 DSQI-SMLLKRQPGLFGKRESQLRDIVSMVVDTGFSTNTKMFAHGLHAIGSVSNATFNKK 263
              + S+L+ R   + GK   +  + +  VVD GF      F   LH +  +S  T  +K
Sbjct: 212 QKLLFSLLISRYQPVCGK--EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEK 271

Query: 264 V-----------------------------------ELICSFGISEKECMRMITSAPVLI 323
           V                                   E +   G+ E+E + ++ S P  I
Sbjct: 272 VNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCI 331

Query: 324 RTSIGKLKSGLEFFM-----------------------NEAKVSKSDIVRK--------- 382
           R+S  K+   +E F+                        E    K +++ K         
Sbjct: 332 RSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAV 391

The following BLAST results are available for this feature:

BLAST of Lsi07G001890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK23	7.5e-12	24.07	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	2.1e-06	20.20	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	5.2e-05	27.21	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q84X53	6.8e-05	33.71	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
F4IHL3	1.5e-04	25.81	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Lsi07G001890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JB80	3.6e-174	80.82	uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1END2	2.3e-173	80.56	uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1EN21	4.3e-172	80.05	uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A6J1J5Y4	4.8e-171	80.88	uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1C8W1	3.1e-154	73.91	uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lsi07G001890 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015351.1	2.5e-174	81.07	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022984673.1	7.3e-174	80.82	uncharacterized protein LOC111482884 isoform X1 [Cucurbita maxima] >XP_022984674...	[more]
XP_038888519.1	1.6e-173	82.29	transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida]	[more]
XP_022929526.1	4.8e-173	80.56	uncharacterized protein LOC111436067 [Cucurbita moschata]	[more]
XP_023552362.1	4.8e-173	81.07	uncharacterized protein LOC111810052 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi07G001890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64950.1	3.5e-65	39.39	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	4.8e-38	29.71	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	1.5e-20	24.69	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	5.9e-20	23.87	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	1.1e-18	22.17	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 94..125 e-value: 0.082 score: 22.0 coord: 130..160 e-value: 14.0 score: 14.6 coord: 306..337 e-value: 850.0 score: 4.5 coord: 169..200 e-value: 220.0 score: 9.0 coord: 274..305 e-value: 15.0 score: 14.5 coord: 205..235 e-value: 95.0 score: 11.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 250..358 e-value: 9.4E-17 score: 60.9 coord: 81..236 e-value: 8.8E-17 score: 61.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 27..378
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 164..370 e-value: 6.3E-36 score: 125.9
None	No IPR available	PANTHER	PTHR13068:SF173	EMB\|CAB62602.1	coord: 27..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G001890.1	Lsi07G001890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding