Lsi07G001830 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAGCAACAGAAGGAGAAGCTTGAGAGAATGGAAGCAGATCGATTCTCTCGAGGAGAGGCCGGAACCGCCACCAGCTCCTCCGGTGGCAGTTCTTTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCCGCCGACAGCTACAAAAACAGGACATGA ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAGCAACAGAAGGAGAAGCTTGAGAGAATGGAAGCAGATCGATTCTCTCGAGGAGAGGCCGGAACCGCCACCAGCTCCTCCGGTGGCAGTTCTTTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCCGCCGACAGCTACAAAAACAGGACATGA ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAGCAACAGAAGGAGAAGCTTGAGAGAATGGAAGCAGATCGATTCTCTCGAGGAGAGGCCGGAACCGCCACCAGCTCCTCCGGTGGCAGTTCTTTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCCGCCGACAGCTACAAAAACAGGACATGA MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTATSSSGGSSLLARNNKVHPGSIAPAAADSYKNRT Homology
BLAST of Lsi07G001830 vs. ExPASy TrEMBL
Match: A0A2P5CW36 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_117820 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.2e-05 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Lsi07G001830 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Lsi07G001830 vs. ExPASy TrEMBL
Match: A0A2P5BZF9 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_303210 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of Lsi07G001830 vs. ExPASy TrEMBL
Match: A0A061DQL6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001203 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-04 Identity = 29/71 (40.85%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of Lsi07G001830 vs. ExPASy TrEMBL
Match: I1MYV6 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G020300 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.4e-04 Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of Lsi07G001830 vs. NCBI nr
Match: KAG6600624.1 (hypothetical protein SDJN03_05857, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 111.3 bits (277), Expect = 3.4e-21 Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 0
BLAST of Lsi07G001830 vs. NCBI nr
Match: KAE8649159.1 (hypothetical protein Csa_014463, partial [Cucumis sativus]) HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20 Identity = 60/72 (83.33%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Lsi07G001830 vs. NCBI nr
Match: KAG6577271.1 (hypothetical protein SDJN03_24845, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 104.0 bits (258), Expect = 5.5e-19 Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 0
BLAST of Lsi07G001830 vs. NCBI nr
Match: PON65265.1 (hypothetical protein PanWU01x14_117820 [Parasponia andersonii]) HSP 1 Score: 57.8 bits (138), Expect = 4.5e-05 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Lsi07G001830 vs. NCBI nr
Match: PON54203.1 (hypothetical protein TorRG33x02_303210 [Trema orientale]) HSP 1 Score: 54.3 bits (129), Expect = 5.0e-04 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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