Lsi07G001740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G001740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Location	chr07: 1856369 .. 1859709 (-)
RNA-Seq Expression	Lsi07G001740
Synteny	Lsi07G001740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAAATATTCTCAAAATCTCGAAATTTCTCAAAATTGGGGGAAAACAAAATTTTTCTCAATCAATCTTTTAAGACCCTCGAAACCTCGAAATTTCGAGATTTCGATGGAAATTTTTCATTATGTTTCTCTTAGAAATTTTGTATCGATCATAGTTTTCCCAAGGTTGAAATGGGCTTTTAGGCCACATATATTACATTAGACAATGCCCAAGTCCATCTAGAGAACAAGTGATTGCAACATGCAATGGCTAATTTTTGTATCATTGTATAAAGTGGACATCAATATATTTACAAGTGTGATGGAAGGGTAGAAGCACGTGTAATTCAAGCAATAACCACACCGTCATCAAAACAAACACATGCTGACATGCATTACCCTCTCAAACCAAACTCTTCCTTCTTCATTTTCGATTGAAACAGAGTTGACAGAGAATAAGGAAAAGAAGAATGTTAAAAAGCTGGTTCCGCCATGGCTACAACAAGGTGGCTAAGACGAGGTTTGGAGTATTAGAAGCCCATCCTGTGGCTCAGCAACATGCAGAAGAAGCCATGGAAGCTCATGTTGAAACACAGAATAAGCTTAAATCCAATCAAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTCCTTCACTCTTTCTTTGTTGATCTCTCTAATTGTGGTCCTATGGTACACTCTTCCTCTCTTTCTCTTTCTCTAATGACATTTTAGAACTATGTTTCATAATTTTGGTTTGGTGTCATATTAGTTTTTGGCTTAAATTCGAGAAATTACTCAAGTAGCCTTCGCAGTTGAGAAACTGCAAAAGTATCTCGAATTTGTATTTAGTTATTGATGCCAAAATTTGGATGAGATAAATACAAACTCAATTCTCCTGAGACAACAACCGTGAATTTGTAATATAGTGAAAAATACTACCAGCAAAACGAAAAAGATCTGGACACTTGTGTGGTGCTTGCCACACAAGCTGCGATGTTTAGCAGAGAAAACTATGTAGCATATAGGGAACTTTAGTATGTGAGTGAACTCACTCCTTTGGGAGAGTTTACCATATATTTATAGTTTACATTGACCTAGACCCTCCTTCCTTTAGGGTTTCCAACATGCACTTCTTGGATAAATGTATTTAGAGGAACTGCAAAAATACCTCGAATTGTATCTCGTGATTAGCTTGATGAGTGGTTATCACGACATGCATATTTTTTAATTCAAATCCCTTTCCCTTGTTAAATCGTCGATTGAGGGTCAATTGGCGATTTAAGATGGTATCAAAAGCAGGTAGATTATCTTAAACTCTTGGGTCAATCGACGATTTAATACTTTTCTCAATTAATAAGAAGGATGTTTGTAGATAACTTGTATGTGAGGATGTGATTCACAGTTTTGCATCGATACTCTCTAGATCTTTTGAATGTGAGATGCTCAACCAGATATGTATGAGATAGGAATGAGGAAAGTAGATATATTAAGACTGGTGAGATGGTGATTTTGTAGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAGAAAGACTCAAGTTTGAGTTATAGAAGGTCTTGTAGGGAAGGAATATGTGGATCATGTGCCATGAACATTGATGGAGCTAACACAGTGGCCTGTCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACTCCTCTTCCCCACATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTAATCTCTCTCATCTCACTTTTCACTTTTTATCTTTAGCTTAAGCTTAACCTTCAATGTTTTTCAATTATCATTCAAATCTTTATAACCTCGTTTCCTTTTATATTAATATGGAAATGTTGAGGATTCCTTGTGATATTATTGTTCTTAATCAAAGTGTGGCATGTTAGAAAAATATTGCATGTTTGTAATATCATTCATTGAATGAGAACATCATTTCTTTTCTCCTTAGCTGACTATAGTTTGATGCATATATAGGTCGATCGAGCCATGGCTGAAGACTAGAAGGTCGACAGAGGATGGGCGAGAGTTCAGGCAATCTCGGGCGGAGAGGAAGAAGCTAGATGGGTTGTATGAGTGTATTCTTTGTGCTTGTTGCAGTGCTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGTCTATCGATGGATCTCTGATAGGTAATTCAAGTACTTTCTCCCCCATTTACTTTTTTTTTTCCAATTATATTTGAGACATATTTGCGAGTTATCTGAAATGGTTGAAATCACTGTTTTTAGTTTCATAATCATTGAAAATACTTTTCAATCCTCCAAAATGAGAGTGATTCTGAAATAGTTAAAATCAATTTTGTCATCTTTAAAATCACTCTGAAACACGATTATCTTTTAATCAAATTGTATTTAACAGTGTAAAATTAAAAATTAAATTAATTTTAATTGATTAAAACGTGTGTCAAAGTAAATAGAAGTGATTTTAACCATTTCAAAATAATTAATTATCTTAAACATTGAGATAGATGTGAAGTTGAACTAGGGTATAATTTGACAAGCTTAATCTATGATTAATGATGTGAGGTTTAAAAGTTGTTTAAAATGGTAGTCGAGATGAGTTCGAGAAGGAACGATTGCAAGCAATAGCGGAAGACAAGACGAAGCTTTATAGATGTAGAACTGTAAAGAACTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTGATCTCCAAGTCCAACAATTAGCTTTTCTACCTTTTTTTATTCTTCTCTAAAATCCTAAGACTAGGCATAGTTTCGAGATCGAACCAATACATCTTCAGTGTTGTTTCTCGTCTCTGGTTTCTTTTATATCTTCAGTCAAAATTTTGATCATTGCTTCTGCAGTACATTTATCTTTCTTTTTCTTCAATCTTAATAACCTTCTTTGTAGTTAACTTGTATAACAAACAAATAGAAAAGGTTGCCAAATACACTCTTTTATAAGAAAACAGAAACAAGGTTATGCAAAATGGGAAATGCAGAACGGTTTGTAGACCCTAAATAATTATTATAAGTAGTGTTTATTACACAATTGTTATACAAAAGCTCCACAAAAAAGGGGGAAGAAAATTAAAGACACATGAAGAAAAGTAGCTTAATCAAGAGTTGCCATCCCATTTCTGGTATCAAACTTAAAAAGAATAGCCAAAACTACAAGTAGAGTTTCTATACAGAAATAAATTTGGGCAAAGCCAAATCCTAAGGCACCAACTTCTGCTGAGAAATTAC

mRNA sequence

TCGAAATATTCTCAAAATCTCGAAATTTCTCAAAATTGGGGGAAAACAAAATTTTTCTCAATCAATCTTTTAAGACCCTCGAAACCTCGAAATTTCGAGATTTCGATGGAAATTTTTCATTATGTTTCTCTTAGAAATTTTGTATCGATCATAGTTTTCCCAAGGTTGAAATGGGCTTTTAGGCCACATATATTACATTAGACAATGCCCAAGTCCATCTAGAGAACAAGTGATTGCAACATGCAATGGCTAATTTTTGTATCATTGTATAAAGTGGACATCAATATATTTACAAGTGTGATGGAAGGGTAGAAGCACGTGTAATTCAAGCAATAACCACACCGTCATCAAAACAAACACATGCTGACATGCATTACCCTCTCAAACCAAACTCTTCCTTCTTCATTTTCGATTGAAACAGAGTTGACAGAGAATAAGGAAAAGAAGAATGTTAAAAAGCTGGTTCCGCCATGGCTACAACAAGGTGGCTAAGACGAGGTTTGGAGTATTAGAAGCCCATCCTGTGGCTCAGCAACATGCAGAAGAAGCCATGGAAGCTCATGTTGAAACACAGAATAAGCTTAAATCCAATCAAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTCCTTCACTCTTTCTTTGTTGATCTCTCTAATTGTGGTCCTATGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAGAAAGACTCAAGTTTGAGTTATAGAAGGTCTTGTAGGGAAGGAATATGTGGATCATGTGCCATGAACATTGATGGAGCTAACACAGTGGCCTGTCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACTCCTCTTCCCCACATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTCGATCGAGCCATGGCTGAAGACTAGAAGGTCGACAGAGGATGGGCGAGAGTTCAGGCAATCTCGGGCGGAGAGGAAGAAGCTAGATGGGTTTCGAGATGAGTTCGAGAAGGAACGATTGCAAGCAATAGCGGAAGACAAGACGAAGCTTTATAGATGTAGAACTGTAAAGAACTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTGATCTCCAAGTCCAACAATTAGCTTTTCTACCTTTTTTTATTCTTCTCTAAAATCCTAAGACTAGGCATAGTTTCGAGATCGAACCAATACATCTTCAGTGTTGTTTCTCGTCTCTGGTTTCTTTTATATCTTCAGTCAAAATTTTGATCATTGCTTCTGCAGTACATTTATCTTTCTTTTTCTTCAATCTTAATAACCTTCTTTGTAGTTAACTTGTATAACAAACAAATAGAAAAGGTTGCCAAATACACTCTTTTATAAGAAAACAGAAACAAGGTTATGCAAAATGGGAAATGCAGAACGGTTTGTAGACCCTAAATAATTATTATAAGTAGTGTTTATTACACAATTGTTATACAAAAGCTCCACAAAAAAGGGGGAAGAAAATTAAAGACACATGAAGAAAAGTAGCTTAATCAAGAGTTGCCATCCCATTTCTGGTATCAAACTTAAAAAGAATAGCCAAAACTACAAGTAGAGTTTCTATACAGAAATAAATTTGGGCAAAGCCAAATCCTAAGGCACCAACTTCTGCTGAGAAATTAC

Coding sequence (CDS)

ATGTTAAAAAGCTGGTTCCGCCATGGCTACAACAAGGTGGCTAAGACGAGGTTTGGAGTATTAGAAGCCCATCCTGTGGCTCAGCAACATGCAGAAGAAGCCATGGAAGCTCATGTTGAAACACAGAATAAGCTTAAATCCAATCAAAAGGAGTTCAAAATATATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTCCTTCACTCTTTCTTTGTTGATCTCTCTAATTGTGGTCCTATGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAGAAAGACTCAAGTTTGAGTTATAGAAGGTCTTGTAGGGAAGGAATATGTGGATCATGTGCCATGAACATTGATGGAGCTAACACAGTGGCCTGTCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTATAACTCCTCTTCCCCACATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTCGATCGAGCCATGGCTGAAGACTAGAAGGTCGACAGAGGATGGGCGAGAGTTCAGGCAATCTCGGGCGGAGAGGAAGAAGCTAGATGGGTTTCGAGATGAGTTCGAGAAGGAACGATTGCAAGCAATAGCGGAAGACAAGACGAAGCTTTATAGATGTAGAACTGTAAAGAACTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCTCTGCAATTCACCACATGAAGGCAATGCATTTGATCTCCAAGTCCAACAATTAG

Protein sequence

MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLKSNQKEFKIYRWNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREFRQSRAERKKLDGFRDEFEKERLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSNN

Homology

[Close]

BLAST of Lsi07G001740 vs. ExPASy Swiss-Prot
Match: Q9FJP9 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-3 PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.0e-82
Identity = 160/269 (59.48%), Postives = 189/269 (70.26%), Query Frame = 0


Query: 18  FGVLEAHPVAQQHAEEAMEAH---VETQNKLKSNQKEFKIYRWNPQYPNHKPFLHSFFVD 77
           F +L  H  AQ  +++ +++     E + + K  +KEFKIYRWNP  PN KPFL SFFVD
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 78  LSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGANTVACLKPIDADTSKP 137
           LS+CGPMVLD LQKIKAE D+SLSYRRSCREGICGSC+MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 138 TIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREFRQSRAERKKLDGF-- 197
           TIITPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKTR+  +DGRE RQS  +RKKLDG   
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 198 -------------------------------------RDEFEKERLQAIAEDKTKLYRCR 245
                                                RDE+ +ERLQAI E +TK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

[Close]

BLAST of Lsi07G001740 vs. ExPASy Swiss-Prot
Match: Q6H4G3 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-2 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.4e-66
Identity = 137/289 (47.40%), Postives = 173/289 (59.86%), Query Frame = 0


Query: 14  AKTRFGVLEAHPVAQQHAEEAMEAHVETQNK-----------------LKSNQKEFKIYR 73
           A   F  L  HP A+ +A +A E       K                   S  KEF++YR
Sbjct: 22  ADGHFPSLRGHPAARANARDAAEKQAALAAKEEEIRDHRRGDAAAASPAPSTVKEFRVYR 81

Query: 74  WNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNID 133
           W+P  P+ +P L S+ VDL+ CGPMVLD LQKIKAE D++L++RRSCREGICGSC+M ID
Sbjct: 82  WSPDAPSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGICGSCSMCID 141

Query: 134 GANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTE-D 193
           G NTVACL+P+D DTS  T +TPLPHM+V++DLVVDLT+FYQQYKS+EPWLK +  T+ +
Sbjct: 142 GVNTVACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKRKTKTKTE 201

Query: 194 GREFRQSRAERKKLDGF---------------------------------------RDEF 246
             E  QS  ERK+LDG                                        RDE+
Sbjct: 202 TTEHAQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRWVSDSRDEY 261

[Close]

BLAST of Lsi07G001740 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-55
Identity = 121/240 (50.42%), Postives = 151/240 (62.92%), Query Frame = 0


Query: 43  NKLKSNQKEFKIYRWNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRS 102
           +K  +N K F IYRW+P  P+ KP L  + VDLS+CGPMVLD L KIK E+D SL++RRS
Sbjct: 42  SKAGANTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRS 101

Query: 103 CREGICGSCAMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKS 162
           CREGICGSCAMNIDG N +ACL  I + +S  T I+PLPHMFVIKDLVVD+TNFY QYKS
Sbjct: 102 CREGICGSCAMNIDGDNGLACLTKISSASSAST-ISPLPHMFVIKDLVVDMTNFYNQYKS 161

Query: 163 IEPWLKTRRS-TEDGREFRQSRAERKKLDGF----------------------------- 222
           +EPWLK + +  + G+E  Q++A+R KLDG                              
Sbjct: 162 VEPWLKRKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAAL 221

Query: 223 ----------RDEFEKERLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHL 243
                     RD+F KERL +I  D+ KLYRC T+KNCT  CPK L+P+  I  +K + L
Sbjct: 222 LHANRWIQDSRDQFTKERLDSI-NDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]

BLAST of Lsi07G001740 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 3.5e-55
Identity = 121/231 (52.38%), Postives = 145/231 (62.77%), Query Frame = 0


Query: 50  KEFKIYRWNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICG 109
           K F+IYRWNP  P  KP L  + +DL +CGPMVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 110 SCAMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 169
           SCAMNIDG N +ACL  I++  SK T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168

Query: 170 RR-STEDGREFRQSRAERKKLDGF------------------------------------ 229
           +  ++  G+E  QS+ +R KLDG                                     
Sbjct: 169 KNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 228

Query: 230 ---RDEFEKERLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 241
              RDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 SDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]

BLAST of Lsi07G001740 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 1.0e-54
Identity = 121/234 (51.71%), Postives = 145/234 (61.97%), Query Frame = 0


Query: 47  SNQKEFKIYRWNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREG 106
           SN K F+IYRWNP  P  KP L ++ +DL +CGPMVLDAL KIK E D SL++RRSCREG
Sbjct: 47  SNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREG 106

Query: 107 ICGSCAMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 166
           ICGSCAMNIDG N +ACL  I  D +  T ITPLPHMFVIKDLVVD+TNFY QYKSIEPW
Sbjct: 107 ICGSCAMNIDGCNGLACLTKIQ-DEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 166

Query: 167 LKTRR-STEDGREFRQSRAERKKLDGF--------------------------------- 226
           LK +  ++   +E  QS+ +R KLDG                                  
Sbjct: 167 LKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 226

Query: 227 ------RDEFEKERLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 241
                 RDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 227 RWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277

[Close]

BLAST of Lsi07G001740 vs. ExPASy TrEMBL
Match: A0A5D3CZM3 (Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005770 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116
Identity = 219/287 (76.31%), Postives = 233/287 (81.18%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK-SNQKEFKIYRWNP 60
           MLK WFRH YNKV+K RFGVLE HP+A+QHAEEAMEAH E ++ L+ +NQKEFKIYRWNP
Sbjct: 1   MLKGWFRHAYNKVSKKRFGVLEEHPIAKQHAEEAMEAHGEIKSNLRFNNQKEFKIYRWNP 60

Query: 61  QYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120
           QYPNHKPFLHSFF+DLS CGPMVLDALQ IKAEKDSSLSYRRSCREGICGSCAMNIDGAN
Sbjct: 61  QYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120

Query: 121 TVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREF 180
           TVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS E GREF
Sbjct: 121 TVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREF 180

Query: 181 RQSRAERKKLDGF---------------------------------------RDEFEKER 240
           RQ+ AERKKLDG                                        RDEF++ER
Sbjct: 181 RQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKEER 240

Query: 241 LQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           LQAIAED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 LQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of Lsi07G001740 vs. ExPASy TrEMBL
Match: A0A1S3BZX5 (Iron-sulfur subunit of complex II OS=Cucumis melo OX=3656 GN=LOC103494867 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116
Identity = 219/287 (76.31%), Postives = 233/287 (81.18%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK-SNQKEFKIYRWNP 60
           MLK WFRH YNKV+K RFGVLE HP+A+QHAEEAMEAH E ++ L+ +NQKEFKIYRWNP
Sbjct: 1   MLKGWFRHAYNKVSKKRFGVLEEHPIAKQHAEEAMEAHGEIKSNLRFNNQKEFKIYRWNP 60

Query: 61  QYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120
           QYPNHKPFLHSFF+DLS CGPMVLDALQ IKAEKDSSLSYRRSCREGICGSCAMNIDGAN
Sbjct: 61  QYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120

Query: 121 TVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREF 180
           TVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS E GREF
Sbjct: 121 TVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREF 180

Query: 181 RQSRAERKKLDGF---------------------------------------RDEFEKER 240
           RQ+ AERKKLDG                                        RDEF++ER
Sbjct: 181 RQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKEER 240

Query: 241 LQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           LQAIAED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 LQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of Lsi07G001740 vs. ExPASy TrEMBL
Match: A0A5A7TNF4 (Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005780 PE=3 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 220/287 (76.66%), Postives = 234/287 (81.53%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK-SNQKEFKIYRWNP 60
           MLKSWFRH YNKV+K RFGVLE HP+A+QHAEEAMEAH E ++ L+ +NQKEFKIYRWNP
Sbjct: 1   MLKSWFRHAYNKVSKQRFGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFKIYRWNP 60

Query: 61  QYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120
           QYPNHKPFLHSFF+DLS CGPMVLDALQ IKAEKDSSLSYRRSCREGICGSCAMNIDGAN
Sbjct: 61  QYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120

Query: 121 TVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREF 180
           TVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS E GREF
Sbjct: 121 TVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREF 180

Query: 181 RQSRAERKKLDGF---------------------------------------RDEFEKER 240
           RQ+ AERKKLDG                                        RDEF+KER
Sbjct: 181 RQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRDEFKKER 240

Query: 241 LQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           LQAIAEDKTKLYRCRTV+NCTANCPKSLDPSSAIH+MKAMHLI +SN
Sbjct: 241 LQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSN 287

[Close]

BLAST of Lsi07G001740 vs. ExPASy TrEMBL
Match: A0A1S3BY85 (Iron-sulfur subunit of complex II OS=Cucumis melo OX=3656 GN=LOC103494868 PE=3 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 220/287 (76.66%), Postives = 234/287 (81.53%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK-SNQKEFKIYRWNP 60
           MLKSWFRH YNKV+K RFGVLE HP+A+QHAEEAMEAH E ++ L+ +NQKEFKIYRWNP
Sbjct: 1   MLKSWFRHAYNKVSKQRFGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFKIYRWNP 60

Query: 61  QYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120
           QYPNHKPFLHSFF+DLS CGPMVLDALQ IKAEKDSSLSYRRSCREGICGSCAMNIDGAN
Sbjct: 61  QYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120

Query: 121 TVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREF 180
           TVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS E GREF
Sbjct: 121 TVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREF 180

Query: 181 RQSRAERKKLDGF---------------------------------------RDEFEKER 240
           RQ+ AERKKLDG                                        RDEF+KER
Sbjct: 181 RQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRDEFKKER 240

Query: 241 LQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           LQAIAEDKTKLYRCRTV+NCTANCPKSLDPSSAIH+MKAMHLI +SN
Sbjct: 241 LQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSN 287

[Close]

BLAST of Lsi07G001740 vs. ExPASy TrEMBL
Match: A0A5A7TT90 (Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00050 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116
Identity = 219/287 (76.31%), Postives = 233/287 (81.18%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK-SNQKEFKIYRWNP 60
           MLK WFRH YNKV+K RFGVLE HP+A+QHAEEAMEAH E ++ L+ +NQKEFKIYRWNP
Sbjct: 1   MLKGWFRHAYNKVSKKRFGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFKIYRWNP 60

Query: 61  QYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120
           QYPNHKPFLHSFF+DLS CGPMVLDALQ IKAEKDSSLSYRRSCREGICGSCAMNIDGAN
Sbjct: 61  QYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120

Query: 121 TVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREF 180
           TVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS E GREF
Sbjct: 121 TVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREF 180

Query: 181 RQSRAERKKLDGF---------------------------------------RDEFEKER 240
           RQ+ AERKKLDG                                        RDEF++ER
Sbjct: 181 RQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKEER 240

Query: 241 LQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           LQAIAED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 LQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of Lsi07G001740 vs. NCBI nr
Match: XP_038875058.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Benincasa hispida])

HSP 1 Score: 439.5 bits (1129), Expect = 1.9e-119
Identity = 228/291 (78.35%), Postives = 234/291 (80.41%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKT-----RFGVLEAHPVAQQHAEEAMEAHVETQNKLKSNQKEFKIY 60
           MLKSWFRHGYNKVAK      +FGVLEAHP AQQHAEEAMEAH E Q+ LK +QKEFKIY
Sbjct: 1   MLKSWFRHGYNKVAKRLAMKGKFGVLEAHPKAQQHAEEAMEAHGEIQSNLKFHQKEFKIY 60

Query: 61  RWNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNI 120
           RWNPQYPNHKPFLHSFFVDLS CGPMVLD LQKIKAE+DSSLSYRRSCREGICGSCAMNI
Sbjct: 61  RWNPQYPNHKPFLHSFFVDLSKCGPMVLDGLQKIKAEQDSSLSYRRSCREGICGSCAMNI 120

Query: 121 DGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTED 180
           DGANTVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRR  ED
Sbjct: 121 DGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRPAED 180

Query: 181 GREFRQSRAERKKLDGF---------------------------------------RDEF 240
           GREFRQSRAERKKLDG                                        RDEF
Sbjct: 181 GREFRQSRAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLNAYRWISDSRDEF 240

Query: 241 EKERLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           EKERLQAI EDKTKLYRCRTV+NCTANCPKSLDPSSAIH MKAMHLISKSN
Sbjct: 241 EKERLQAIVEDKTKLYRCRTVQNCTANCPKSLDPSSAIHRMKAMHLISKSN 291

[Close]

BLAST of Lsi07G001740 vs. NCBI nr
Match: XP_008454471.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucumis melo] >TYK16738.1 succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 219/287 (76.31%), Postives = 233/287 (81.18%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK-SNQKEFKIYRWNP 60
           MLK WFRH YNKV+K RFGVLE HP+A+QHAEEAMEAH E ++ L+ +NQKEFKIYRWNP
Sbjct: 1   MLKGWFRHAYNKVSKKRFGVLEEHPIAKQHAEEAMEAHGEIKSNLRFNNQKEFKIYRWNP 60

Query: 61  QYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120
           QYPNHKPFLHSFF+DLS CGPMVLDALQ IKAEKDSSLSYRRSCREGICGSCAMNIDGAN
Sbjct: 61  QYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120

Query: 121 TVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREF 180
           TVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS E GREF
Sbjct: 121 TVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREF 180

Query: 181 RQSRAERKKLDGF---------------------------------------RDEFEKER 240
           RQ+ AERKKLDG                                        RDEF++ER
Sbjct: 181 RQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKEER 240

Query: 241 LQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           LQAIAED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 LQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of Lsi07G001740 vs. NCBI nr
Match: XP_008454472.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial-like [Cucumis melo] >KAA0044720.1 succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. makuwa] >TYK16739.1 succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 428.7 bits (1101), Expect = 3.4e-116
Identity = 220/287 (76.66%), Postives = 234/287 (81.53%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK-SNQKEFKIYRWNP 60
           MLKSWFRH YNKV+K RFGVLE HP+A+QHAEEAMEAH E ++ L+ +NQKEFKIYRWNP
Sbjct: 1   MLKSWFRHAYNKVSKQRFGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFKIYRWNP 60

Query: 61  QYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120
           QYPNHKPFLHSFF+DLS CGPMVLDALQ IKAEKDSSLSYRRSCREGICGSCAMNIDGAN
Sbjct: 61  QYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120

Query: 121 TVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREF 180
           TVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS E GREF
Sbjct: 121 TVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREF 180

Query: 181 RQSRAERKKLDGF---------------------------------------RDEFEKER 240
           RQ+ AERKKLDG                                        RDEF+KER
Sbjct: 181 RQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRDEFKKER 240

Query: 241 LQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           LQAIAEDKTKLYRCRTV+NCTANCPKSLDPSSAIH+MKAMHLI +SN
Sbjct: 241 LQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSN 287

[Close]

BLAST of Lsi07G001740 vs. NCBI nr
Match: XP_004146922.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucumis sativus] >KGN53225.1 hypothetical protein Csa_014570 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 4.4e-116
Identity = 222/288 (77.08%), Postives = 231/288 (80.21%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK--SNQKEFKIYRWN 60
           MLK WFRHGYNK  K RFGVLEA P+A+QHAEEAMEAH E ++ L   +N+KEFKIYRWN
Sbjct: 1   MLKRWFRHGYNKEWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEFKIYRWN 60

Query: 61  PQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGA 120
           PQYPNHKPFLHSFF+DLS CGPMVLDALQKIKAEKDSSLSYRRSCREGICGSC MNIDGA
Sbjct: 61  PQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGA 120

Query: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGRE 180
           NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRS E GRE
Sbjct: 121 NTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGRE 180

Query: 181 FRQSRAERKKLDGF---------------------------------------RDEFEKE 240
           FRQS AERKKLDG                                        RDEF+KE
Sbjct: 181 FRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKKE 240

Query: 241 RLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           RLQAIAED TKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 RLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN 288

[Close]

BLAST of Lsi07G001740 vs. NCBI nr
Match: KAA0044721.1 (succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 428.3 bits (1100), Expect = 4.4e-116
Identity = 219/287 (76.31%), Postives = 233/287 (81.18%), Query Frame = 0


Query: 1   MLKSWFRHGYNKVAKTRFGVLEAHPVAQQHAEEAMEAHVETQNKLK-SNQKEFKIYRWNP 60
           MLK WFRH YNKV+K RFGVLE HP+A+QHAEEAMEAH E ++ L+ +NQKEFKIYRWNP
Sbjct: 1   MLKGWFRHAYNKVSKKRFGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFKIYRWNP 60

Query: 61  QYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120
           QYPNHKPFLHSFF+DLS CGPMVLDALQ IKAEKDSSLSYRRSCREGICGSCAMNIDGAN
Sbjct: 61  QYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAMNIDGAN 120

Query: 121 TVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREF 180
           TVACLKPIDADTSKPTIITPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS E GREF
Sbjct: 121 TVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSAEGGREF 180

Query: 181 RQSRAERKKLDGF---------------------------------------RDEFEKER 240
           RQ+ AERKKLDG                                        RDEF++ER
Sbjct: 181 RQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRDEFKEER 240

Query: 241 LQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 248
           LQAIAED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 LQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of Lsi07G001740 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 307.0 bits (785), Expect = 1.4e-83
Identity = 160/269 (59.48%), Postives = 189/269 (70.26%), Query Frame = 0


Query: 18  FGVLEAHPVAQQHAEEAMEAH---VETQNKLKSNQKEFKIYRWNPQYPNHKPFLHSFFVD 77
           F +L  H  AQ  +++ +++     E + + K  +KEFKIYRWNP  PN KPFL SFFVD
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 78  LSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCAMNIDGANTVACLKPIDADTSKP 137
           LS+CGPMVLD LQKIKAE D+SLSYRRSCREGICGSC+MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 138 TIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSTEDGREFRQSRAERKKLDGF-- 197
           TIITPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKTR+  +DGRE RQS  +RKKLDG   
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 198 -------------------------------------RDEFEKERLQAIAEDKTKLYRCR 245
                                                RDE+ +ERLQAI E +TK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

[Close]

BLAST of Lsi07G001740 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-56
Identity = 121/231 (52.38%), Postives = 145/231 (62.77%), Query Frame = 0


Query: 50  KEFKIYRWNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREGICG 109
           K F+IYRWNP  P  KP L  + +DL +CGPMVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 110 SCAMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 169
           SCAMNIDG N +ACL  I++  SK T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 168

Query: 170 RR-STEDGREFRQSRAERKKLDGF------------------------------------ 229
           +  ++  G+E  QS+ +R KLDG                                     
Sbjct: 169 KNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI 228

Query: 230 ---RDEFEKERLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 241
              RDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 SDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]

BLAST of Lsi07G001740 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 214.9 bits (546), Expect = 7.2e-56
Identity = 121/234 (51.71%), Postives = 145/234 (61.97%), Query Frame = 0


Query: 47  SNQKEFKIYRWNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREG 106
           SN K F+IYRWNP  P  KP L ++ +DL +CGPMVLDAL KIK E D SL++RRSCREG
Sbjct: 47  SNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREG 106

Query: 107 ICGSCAMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 166
           ICGSCAMNIDG N +ACL  I  D +  T ITPLPHMFVIKDLVVD+TNFY QYKSIEPW
Sbjct: 107 ICGSCAMNIDGCNGLACLTKIQ-DEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 166

Query: 167 LKTRR-STEDGREFRQSRAERKKLDGF--------------------------------- 226
           LK +  ++   +E  QS+ +R KLDG                                  
Sbjct: 167 LKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 226

Query: 227 ------RDEFEKERLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 241
                 RDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 227 RWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277

[Close]

BLAST of Lsi07G001740 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 214.9 bits (546), Expect = 7.2e-56
Identity = 121/234 (51.71%), Postives = 145/234 (61.97%), Query Frame = 0


Query: 47  SNQKEFKIYRWNPQYPNHKPFLHSFFVDLSNCGPMVLDALQKIKAEKDSSLSYRRSCREG 106
           SN K F+IYRWNP  P  KP L ++ +DL +CGPMVLDAL KIK E D SL++RRSCREG
Sbjct: 47  SNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREG 106

Query: 107 ICGSCAMNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 166
           ICGSCAMNIDG N +ACL  I  D +  T ITPLPHMFVIKDLVVD+TNFY QYKSIEPW
Sbjct: 107 ICGSCAMNIDGCNGLACLTKIQ-DEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 166

Query: 167 LKTRR-STEDGREFRQSRAERKKLDGF--------------------------------- 226
           LK +  ++   +E  QS+ +R KLDG                                  
Sbjct: 167 LKRKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 226

Query: 227 ------RDEFEKERLQAIAEDKTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 241
                 RDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 227 RWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 277

The following BLAST results are available for this feature:

BLAST of Lsi07G001740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJP9	2.0e-82	59.48	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Ara...	[more]
Q6H4G3	4.4e-66	47.40	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ory...	[more]
Q9S827	1.2e-55	50.42	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory...	[more]
Q8LB02	3.5e-55	52.38	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara...	[more]
Q8LBZ7	1.0e-54	51.71	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara...	[more]

BLAST of Lsi07G001740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZM3	1.3e-116	76.31	Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BZX5	1.3e-116	76.31	Iron-sulfur subunit of complex II OS=Cucumis melo OX=3656 GN=LOC103494867 PE=3 S...	[more]
A0A5A7TNF4	1.6e-116	76.66	Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BY85	1.6e-116	76.66	Iron-sulfur subunit of complex II OS=Cucumis melo OX=3656 GN=LOC103494868 PE=3 S...	[more]
A0A5A7TT90	2.1e-116	76.31	Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Lsi07G001740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875058.1	1.9e-119	78.35	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Benin...	[more]
XP_008454471.1	2.6e-116	76.31	PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochond...	[more]
XP_008454472.1	3.4e-116	76.66	PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochond...	[more]
XP_004146922.1	4.4e-116	77.08	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucum...	[more]
KAA0044721.1	4.4e-116	76.31	succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. ma...	[more]

BLAST of Lsi07G001740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65165.1	1.4e-83	59.48	succinate dehydrogenase 2-3	[more]
AT5G40650.1	2.5e-56	52.38	succinate dehydrogenase 2-2	[more]
AT3G27380.1	7.2e-56	51.71	succinate dehydrogenase 2-1	[more]
AT3G27380.2	7.2e-56	51.71	succinate dehydrogenase 2-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..51
None	No IPR available	PANTHER	PTHR11921	SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN	coord: 193..246 coord: 4..192
None	No IPR available	PANTHER	PTHR11921:SF40	SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT 3, MITOCHONDRIAL	coord: 193..246 coord: 4..192
None	No IPR available	SUPERFAMILY	46548	alpha-helical ferredoxin	coord: 154..241
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 39..152 e-value: 3.0E-40 score: 138.6
IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein	TIGRFAM	TIGR00384	TIGR00384	coord: 54..193 e-value: 4.0E-44 score: 148.7
IPR025192	Succinate dehydogenase/fumarate reductase N-terminal	PFAM	PF13085	Fer2_3	coord: 52..157 e-value: 6.9E-31 score: 106.5
IPR009051	Alpha-helical ferredoxin	GENE3D	1.10.1060.10		coord: 191..248 e-value: 2.1E-10 score: 42.2
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 103..111
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 50..143 score: 8.639751
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 82..116 e-value: 0.00520437 score: 33.1372
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 48..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G001740.1	Lsi07G001740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045273	respiratory chain complex II
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity