Homology
BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match:
Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1)
HSP 1 Score: 333.6 bits (854), Expect = 4.3e-90
Identity = 174/473 (36.79%), Postives = 275/473 (58.14%), Query Frame = 0
Query: 74 KDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTL 133
+D+ EL L N +I + K G+ A+ LL ++ G A A+ +I AL + GRTL
Sbjct: 262 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321
Query: 134 EADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILL 193
EA+ +F+E+ G KPRT NALL+G+++ G L A ++ M + ++ TY +L+
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 194 DYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGIS 253
D + NAGR E ++ EM+ + NSFV+S+++ +++ G W+K ++ E++ G+
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 254 VDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALEL 313
D+ YN +IDTFGK+ L A+ F RM +G+ P+ TWN+LI +CK G A E+
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 314 FTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQ 373
F M+ +G P + +I+S G+Q +WD +K+ L MK +G + + + LVD+YG+
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 374 YGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVI 433
G+F DA +C+ +KS GL PS++ + + NA++Q+GL E+ V ++M ++G++P+L+
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 434 LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDL 493
LN LINAF R +EA A+ ++ E G+ PDV+TYTTLMKA IR KF K
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK--------- 681
Query: 494 LAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTVVLEQ 547
VP +Y+EM +GC PDRKAR ML+S ++Q
Sbjct: 682 ---------------------VPVVYEEMIMSGCKPDRKARSMLRSALRYMKQ 704
BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match:
A0A1D6IEG9 (Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4577 GN=CRP1 PE=1 SV=1)
HSP 1 Score: 318.9 bits (816), Expect = 1.1e-85
Identity = 172/463 (37.15%), Postives = 270/463 (58.32%), Query Frame = 0
Query: 78 ELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADI 137
E + L + LI + + D+A+ LLA +++G + LI ALG GR EA+
Sbjct: 225 EPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEA 284
Query: 138 IFQEMISFG-CKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYH 197
+F E G KPRT NALL+G++R L A VL MS + ++ TY +L+D +
Sbjct: 285 LFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 344
Query: 198 ANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDK 257
AGR E ++ EM+ G + +S+V+S+++ +++ G W+KA ++ E++ SG+ D+
Sbjct: 345 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDR 404
Query: 258 HIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTD 317
H YN +IDTFGKY L A++ F +M+++G+ P++ TWN+LI +CK G A ELF +
Sbjct: 405 HFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEE 464
Query: 318 MQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQ 377
M+E P + +I+ LGEQ W+ ++ L MK +G + + Y LVD+YG+ G+
Sbjct: 465 MRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 524
Query: 378 FQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNV 437
+++A CI A+K+ GL PS + + + NA++Q+GL + + V++ M+A+G+E ++++LN
Sbjct: 525 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNS 584
Query: 438 LINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDLLAM 497
LINAF R EA ++ + E G+ PDVITYTTLMKA IR ++F K
Sbjct: 585 LINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDK------------ 644
Query: 498 RSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKS 540
VP IY+EM +GC PDRKAR ML+S
Sbjct: 645 ------------------VPVIYEEMITSGCAPDRKARAMLRS 657
BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match:
Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)
HSP 1 Score: 317.8 bits (813), Expect = 2.5e-85
Identity = 177/483 (36.65%), Postives = 277/483 (57.35%), Query Frame = 0
Query: 58 AALDDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVA 117
AAL D + R + + L SD LI + + D+A+ LLA +++G
Sbjct: 202 AALLDRLLGDLRESRLEPDAPLFSD----LISAFARARLPDAALELLASAQAIGLTPRSN 261
Query: 118 SYAYLIEALGNLGRTLEADIIFQEMISFG-CKPRTIVCNALLRGFLRKGLLDLASDVLVL 177
+ LI +LG+ R EA+ +F E G KPRT NALL+G+++ G L A VL
Sbjct: 262 AVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDE 321
Query: 178 MSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGM 237
MS + ++ TY +L+D + AGR E ++ EM+ G + +S+V+S+++ +++ G
Sbjct: 322 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGE 381
Query: 238 WKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNS 297
W+KA ++ E+ SG+ D+H YN +IDTFGKY L A++ F RM+++G+ P++ TWN+
Sbjct: 382 WQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNT 441
Query: 298 LIQWNCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRG 357
LI +CK G A+ELF +M+E + +I+ LGE+ +W+ ++ L MK +G
Sbjct: 442 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 501
Query: 358 HKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETV 417
+ + Y LVD+YG+ G+F++A CI A+K+ GL PS + + + NA++Q+GL + +
Sbjct: 502 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 561
Query: 418 KVLQLMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAF 477
V++ M A+G+E + V+LN LINAF R +EA ++ + E G+ PDVITYTTLMKA
Sbjct: 562 NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 621
Query: 478 IRAKKFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREM 537
IR ++F K VP IY+EM +GC PDRKAR M
Sbjct: 622 IRVEQFEK------------------------------VPVIYEEMITSGCAPDRKARAM 650
Query: 538 LKS 540
L+S
Sbjct: 682 LRS 650
BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match:
Q9FFZ2 (Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis thaliana OX=3702 GN=At5g36300 PE=3 SV=3)
HSP 1 Score: 298.1 bits (762), Expect = 2.0e-79
Identity = 176/419 (42.00%), Postives = 234/419 (55.85%), Query Frame = 0
Query: 79 LSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADII 138
+S + N IR +C+ G + AMSLLA + S+G SY IE L +L RTLEAD +
Sbjct: 9 ISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADAL 68
Query: 139 FQEMISFGCKPRTIV--CNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYH 198
F E++ F V NAL+ +LRK
Sbjct: 69 FHEVVRFMIYGSYSVRLYNALVSRYLRK-------------------------------- 128
Query: 199 ANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDK 258
E +W ++NEMK++ F LNSFVY K+I IY++NGMWKKA+GIV+EIR+ G+ +D
Sbjct: 129 ------EVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDV 188
Query: 259 HIYNSIIDTFGKYGQLSEALEVFKRMQQDG-VMPNITTWNSLIQWNCKAGNLATALELFT 318
IYNS+IDTFGKYG+L E L+V +++Q+ PNI TWNSLI+W+C G + ALELFT
Sbjct: 189 EIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMALELFT 248
Query: 319 DMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYG 378
+
Sbjct: 249 MI---------------------------------------------------------- 308
Query: 379 QFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILN 438
F+D + + LKS G+ PSA+ FC +ANA++QQGLC++TVKVL++ME EGIEPNL++LN
Sbjct: 309 -FEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLN 330
Query: 439 VLINAFAVAGRHSEALAIYHHIIE-VGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDL 494
VLINAF AG+H EAL+IYHHI E V I PDV+TY+TLMKAF RAKK+ V ++ L L
Sbjct: 369 VLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYEMVCSFYLVTL 330
BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 187.6 bits (475), Expect = 3.8e-46
Identity = 110/408 (26.96%), Postives = 203/408 (49.75%), Query Frame = 0
Query: 80 SSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLE-ADII 139
+S + + +++ Y ++ +D A+S++ ++ G V SY +++A R + A+ +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 140 FQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHAN 199
F+EM+ P N L+RGF G +D+A + M N TY L+D +
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 200 AGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHI 259
+++D + ++ M KG E N Y+ VI G K+ ++ E+ + G S+D+
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 260 YNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQ 319
YN++I + K G +AL + M + G+ P++ T+ SLI CKAGN+ A+E M+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 320 EQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQ 379
+G+ P+ + + TL+ ++G + + L M G S + Y L++ + G+ +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 380 DAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLI 439
DA + +K GL P ++ + + F + +E ++V + M +GI+P+ + + LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 440 NAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVL 487
F R EA +Y ++ VG+ PD TYT L+ A+ K L
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match:
A0A6J1E3F2 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430464 PE=4 SV=1)
HSP 1 Score: 931.4 bits (2406), Expect = 1.7e-267
Identity = 469/546 (85.90%), Postives = 491/546 (89.93%), Query Frame = 0
Query: 3 MQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAALDD 62
MQSIFLPKT IV SFGGV+S LLH SSKCDG+YMF DA LKLFR N LKK SKAAL D
Sbjct: 1 MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60
Query: 63 NCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYL 122
N IS RWHGCKD+EELS DLCNCLIRDYCKVGNVD+AMSLL+HME+VG HASVASY YL
Sbjct: 61 NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120
Query: 123 IEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDI 182
IEA GN+GRTLEADI+FQEMISFG PRT VCNALLRGFLRKGLLDLASDVLVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180
Query: 183 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 242
QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240
Query: 243 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNC 302
IVDEIRKSGISVDKHIYNSIIDTFGKYGQL EALEVFK+MQQDGVMP+ITTWNSLIQWNC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300
Query: 303 KAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGL 362
K+GNLATALELFTDMQEQGMHPDPKIF+TLISSLGEQGKWD+IK+NLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360
Query: 363 VYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLM 422
VYEILVDIYGQYGQF+DAEKCISALKSAGLLPSASNFCIIANAF++QGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420
Query: 423 EAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 482
EAEGIEPNLV+LNVLINAFAVAGRH EA+AIYHHI+EVGISPDVITYTTLMKA+IRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480
Query: 483 SKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTV 542
H+VPEIYKEME AGCTPDRKAREMLKSVTV
Sbjct: 481 ------------------------------HKVPEIYKEMERAGCTPDRKAREMLKSVTV 516
Query: 543 VLEQRH 549
VLEQRH
Sbjct: 541 VLEQRH 516
BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match:
A0A6J1E8S9 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430464 PE=4 SV=1)
HSP 1 Score: 931.4 bits (2406), Expect = 1.7e-267
Identity = 469/546 (85.90%), Postives = 491/546 (89.93%), Query Frame = 0
Query: 3 MQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAALDD 62
MQSIFLPKT IV SFGGV+S LLH SSKCDG+YMF DA LKLFR N LKK SKAAL D
Sbjct: 1 MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60
Query: 63 NCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYL 122
N IS RWHGCKD+EELS DLCNCLIRDYCKVGNVD+AMSLL+HME+VG HASVASY YL
Sbjct: 61 NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120
Query: 123 IEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDI 182
IEA GN+GRTLEADI+FQEMISFG PRT VCNALLRGFLRKGLLDLASDVLVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180
Query: 183 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 242
QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240
Query: 243 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNC 302
IVDEIRKSGISVDKHIYNSIIDTFGKYGQL EALEVFK+MQQDGVMP+ITTWNSLIQWNC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300
Query: 303 KAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGL 362
K+GNLATALELFTDMQEQGMHPDPKIF+TLISSLGEQGKWD+IK+NLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360
Query: 363 VYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLM 422
VYEILVDIYGQYGQF+DAEKCISALKSAGLLPSASNFCIIANAF++QGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420
Query: 423 EAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 482
EAEGIEPNLV+LNVLINAFAVAGRH EA+AIYHHI+EVGISPDVITYTTLMKA+IRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480
Query: 483 SKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTV 542
H+VPEIYKEME AGCTPDRKAREMLKSVTV
Sbjct: 481 ------------------------------HKVPEIYKEMERAGCTPDRKAREMLKSVTV 516
Query: 543 VLEQRH 549
VLEQRH
Sbjct: 541 VLEQRH 516
BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match:
A0A0A0KZ91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025700 PE=4 SV=1)
HSP 1 Score: 928.3 bits (2398), Expect = 1.5e-266
Identity = 470/550 (85.45%), Postives = 491/550 (89.27%), Query Frame = 0
Query: 1 MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
MKM SIFLPK IVSSFGGVFSD LL SSKCDGKYMFD +KLFRNN+L ASKA +
Sbjct: 1 MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60
Query: 61 DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
DDNCIIS+RWHGC DEEELSS+ CN LIRDYCKVG+VDSAMSLLAHMESVG HA++ SY
Sbjct: 61 DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120
Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
YLIEALGN+GRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLAS V VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180
Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
DI+KNQETYEILLDYH NAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
VGIVDEIRKSGIS+DKHIYNSIIDTFGKYG LSEALEVFKRMQQDGV+P+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300
Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
NCK+GNLATALELFTDMQEQGMHPDPKIF+TLIS LGEQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360
Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
LVYEILVDIYGQYGQFQDAEKCISALKSAGLL S SNFCIIANAF+QQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420
Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
LMEAEGIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
KF+K VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 520
Query: 541 TVVLEQRHYR 551
T +LEQRHYR
Sbjct: 541 TAILEQRHYR 520
BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match:
A0A5A7TTI3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004510 PE=4 SV=1)
HSP 1 Score: 921.4 bits (2380), Expect = 1.8e-264
Identity = 473/548 (86.31%), Postives = 489/548 (89.23%), Query Frame = 0
Query: 1 MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
MKMQSIFLPK IVSSFGG FSD LLH SSK DGKY FD A LK FRNN L ASKAA+
Sbjct: 1 MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGKYTFDGAILKFFRNNFLNLASKAAV 60
Query: 61 DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
DDNCIIS+RWHGC DEEELSS+ CN LI DYCKVGNVDSAMSLLAHMESVG HA++ASY
Sbjct: 61 DDNCIISSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120
Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
YLIEALGN+GRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
DI+KNQETYEILLDYH NAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
VGIVDEIRKSGIS+DKHIYNSIIDTFGKYGQLSEALEVFKRMQQD V+P+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300
Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
NCKAGNLATALELFTDMQEQGMHPDPKIF+TLIS L EQGKWDVIKQNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360
Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
LVYEILVDIYGQYGQFQD EKCISALKSAGLLPS+SNFCIIANAF+QQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420
Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
LMEAEGIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
KF+K VPEIYKEME+AGCTPDRK REMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKVREMLKSV 517
Query: 541 TVVLEQRH 549
T VLEQRH
Sbjct: 541 TAVLEQRH 517
BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match:
A0A1S4E032 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494438 PE=4 SV=1)
HSP 1 Score: 920.6 bits (2378), Expect = 3.1e-264
Identity = 473/548 (86.31%), Postives = 489/548 (89.23%), Query Frame = 0
Query: 1 MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
MKMQSIFLPK IVSSFGG FSD LLH SSK DG Y FD A LK FRNN L ASKAA+
Sbjct: 1 MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60
Query: 61 DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
DDNCI+S+RWHGC DEEELSS+ CN LI DYCKVGNVDSAMSLLAHMESVG HA++ASY
Sbjct: 61 DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120
Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
YLIEALGN+GRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
DI+KNQETYEILLDYH NAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
VGIVDEIRKSGIS+DKHIYNSIIDTFGKYGQLSEALEVFKRMQQD V+P+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300
Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
NCKAGNLATALELFTDMQEQGMHPDPKIF+TLIS L EQGKWDVIKQNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360
Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
LVYEILVDIYGQYGQFQD EKCISALKSAGLLPS+SNFCIIANAF+QQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420
Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
LMEAEGIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
KFSK VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFSK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 517
Query: 541 TVVLEQRH 549
T VLEQRH
Sbjct: 541 TAVLEQRH 517
BLAST of Lsi07G001420 vs. NCBI nr
Match:
XP_038901793.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X3 [Benincasa hispida] >XP_038901802.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X3 [Benincasa hispida])
HSP 1 Score: 961.4 bits (2484), Expect = 3.2e-276
Identity = 489/550 (88.91%), Postives = 507/550 (92.18%), Query Frame = 0
Query: 1 MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
MKMQS FLPK++IVSSFGGVFSDLLL+P S KC G+YMFDDAALKLFRNNALKK SK AL
Sbjct: 1 MKMQSTFLPKSLIVSSFGGVFSDLLLNPRSIKCVGRYMFDDAALKLFRNNALKKGSKEAL 60
Query: 61 DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
DDN IIS+RWHGC+DE ELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVG HASVASY
Sbjct: 61 DDNHIISSRWHGCRDEAELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGLHASVASYT 120
Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
YLIEALGNLGRTLEADI+FQEM+SFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNLGRTLEADILFQEMLSFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
DI+KNQETYEILLDYHANAGRLEDTWSIINEMK+KGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHANAGRLEDTWSIINEMKQKGFELNSFVYSKVIVIYQNNGMWKKA 240
Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
VGIVDEIRKSGISVDK IYNSI+DTFGKYGQLSEALEVFKRMQQDGVMP+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISVDKCIYNSIVDTFGKYGQLSEALEVFKRMQQDGVMPDITTWNSLIQW 300
Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHK+S
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKDS 360
Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF+QQGL EETVKVLQ
Sbjct: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFAQQGLSEETVKVLQ 420
Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
LMEA+GIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEADGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
KF+K VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 520
Query: 541 TVVLEQRHYR 551
TVVLEQRHYR
Sbjct: 541 TVVLEQRHYR 520
BLAST of Lsi07G001420 vs. NCBI nr
Match:
XP_038901745.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901752.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901759.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901767.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901775.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901783.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida])
HSP 1 Score: 957.2 bits (2473), Expect = 6.1e-275
Identity = 487/548 (88.87%), Postives = 505/548 (92.15%), Query Frame = 0
Query: 1 MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
MKMQS FLPK++IVSSFGGVFSDLLL+P S KC G+YMFDDAALKLFRNNALKK SK AL
Sbjct: 1 MKMQSTFLPKSLIVSSFGGVFSDLLLNPRSIKCVGRYMFDDAALKLFRNNALKKGSKEAL 60
Query: 61 DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
DDN IIS+RWHGC+DE ELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVG HASVASY
Sbjct: 61 DDNHIISSRWHGCRDEAELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGLHASVASYT 120
Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
YLIEALGNLGRTLEADI+FQEM+SFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNLGRTLEADILFQEMLSFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
DI+KNQETYEILLDYHANAGRLEDTWSIINEMK+KGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHANAGRLEDTWSIINEMKQKGFELNSFVYSKVIVIYQNNGMWKKA 240
Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
VGIVDEIRKSGISVDK IYNSI+DTFGKYGQLSEALEVFKRMQQDGVMP+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISVDKCIYNSIVDTFGKYGQLSEALEVFKRMQQDGVMPDITTWNSLIQW 300
Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHK+S
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKDS 360
Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF+QQGL EETVKVLQ
Sbjct: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFAQQGLSEETVKVLQ 420
Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
LMEA+GIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEADGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
KF+K VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 518
Query: 541 TVVLEQRH 549
TVVLEQRH
Sbjct: 541 TVVLEQRH 518
BLAST of Lsi07G001420 vs. NCBI nr
Match:
XP_038901715.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Benincasa hispida] >XP_038901721.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Benincasa hispida] >XP_038901729.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Benincasa hispida] >XP_038901737.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Benincasa hispida])
HSP 1 Score: 957.2 bits (2473), Expect = 6.1e-275
Identity = 487/548 (88.87%), Postives = 505/548 (92.15%), Query Frame = 0
Query: 1 MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
MKMQS FLPK++IVSSFGGVFSDLLL+P S KC G+YMFDDAALKLFRNNALKK SK AL
Sbjct: 1 MKMQSTFLPKSLIVSSFGGVFSDLLLNPRSIKCVGRYMFDDAALKLFRNNALKKGSKEAL 60
Query: 61 DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
DDN IIS+RWHGC+DE ELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVG HASVASY
Sbjct: 61 DDNHIISSRWHGCRDEAELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGLHASVASYT 120
Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
YLIEALGNLGRTLEADI+FQEM+SFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNLGRTLEADILFQEMLSFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180
Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
DI+KNQETYEILLDYHANAGRLEDTWSIINEMK+KGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHANAGRLEDTWSIINEMKQKGFELNSFVYSKVIVIYQNNGMWKKA 240
Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
VGIVDEIRKSGISVDK IYNSI+DTFGKYGQLSEALEVFKRMQQDGVMP+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISVDKCIYNSIVDTFGKYGQLSEALEVFKRMQQDGVMPDITTWNSLIQW 300
Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHK+S
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKDS 360
Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF+QQGL EETVKVLQ
Sbjct: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFAQQGLSEETVKVLQ 420
Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
LMEA+GIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEADGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
KF+K VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 518
Query: 541 TVVLEQRH 549
TVVLEQRH
Sbjct: 541 TVVLEQRH 518
BLAST of Lsi07G001420 vs. NCBI nr
Match:
XP_023551942.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 934.1 bits (2413), Expect = 5.5e-268
Identity = 471/548 (85.95%), Postives = 493/548 (89.96%), Query Frame = 0
Query: 1 MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
+ MQSIFLPKT IV SFGGV+S LLH SSKCDG+YMF DA LKLFR N LKK SKAAL
Sbjct: 24 INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 83
Query: 61 DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
DN IS RWHGCKD+EELS DLCNCLIRDYCKVGNVD+AMSLL+HME+VG HASVASY
Sbjct: 84 YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 143
Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
YLIEA GN+GRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLASDVLVLMSDL
Sbjct: 144 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 203
Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
DIQKNQETYEILLDYHANAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 204 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 263
Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQL EALEVFK+MQQDGVMP+ITTWNSLIQW
Sbjct: 264 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 323
Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
NCK+GNLATALELFTDMQEQGMHPDPKIF+TLISSLGEQGKWDVIK+NLDSMKLRGHKNS
Sbjct: 324 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 383
Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF++QGLCEETVKVL+
Sbjct: 384 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 443
Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
LMEAEGIEPNLV+LNVLINAFAVAGRH EALAIYHHI+EVGISPDVITYTTLMKA+IRAK
Sbjct: 444 LMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAK 503
Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
KF H+VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 504 KF------------------------------HKVPEIYKEMESAGCTPDRKAREMLKSV 541
Query: 541 TVVLEQRH 549
TVVLEQRH
Sbjct: 564 TVVLEQRH 541
BLAST of Lsi07G001420 vs. NCBI nr
Match:
XP_023551938.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551939.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551940.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551941.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 934.1 bits (2413), Expect = 5.5e-268
Identity = 471/548 (85.95%), Postives = 493/548 (89.96%), Query Frame = 0
Query: 1 MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
+ MQSIFLPKT IV SFGGV+S LLH SSKCDG+YMF DA LKLFR N LKK SKAAL
Sbjct: 24 INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 83
Query: 61 DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
DN IS RWHGCKD+EELS DLCNCLIRDYCKVGNVD+AMSLL+HME+VG HASVASY
Sbjct: 84 YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 143
Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
YLIEA GN+GRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLASDVLVLMSDL
Sbjct: 144 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 203
Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
DIQKNQETYEILLDYHANAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 204 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 263
Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQL EALEVFK+MQQDGVMP+ITTWNSLIQW
Sbjct: 264 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 323
Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
NCK+GNLATALELFTDMQEQGMHPDPKIF+TLISSLGEQGKWDVIK+NLDSMKLRGHKNS
Sbjct: 324 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 383
Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF++QGLCEETVKVL+
Sbjct: 384 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 443
Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
LMEAEGIEPNLV+LNVLINAFAVAGRH EALAIYHHI+EVGISPDVITYTTLMKA+IRAK
Sbjct: 444 LMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAK 503
Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
KF H+VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 504 KF------------------------------HKVPEIYKEMESAGCTPDRKAREMLKSV 541
Query: 541 TVVLEQRH 549
TVVLEQRH
Sbjct: 564 TVVLEQRH 541
BLAST of Lsi07G001420 vs. TAIR 10
Match:
AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 333.6 bits (854), Expect = 3.1e-91
Identity = 174/473 (36.79%), Postives = 275/473 (58.14%), Query Frame = 0
Query: 74 KDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTL 133
+D+ EL L N +I + K G+ A+ LL ++ G A A+ +I AL + GRTL
Sbjct: 262 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321
Query: 134 EADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILL 193
EA+ +F+E+ G KPRT NALL+G+++ G L A ++ M + ++ TY +L+
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 194 DYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGIS 253
D + NAGR E ++ EM+ + NSFV+S+++ +++ G W+K ++ E++ G+
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 254 VDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALEL 313
D+ YN +IDTFGK+ L A+ F RM +G+ P+ TWN+LI +CK G A E+
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 314 FTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQ 373
F M+ +G P + +I+S G+Q +WD +K+ L MK +G + + + LVD+YG+
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 374 YGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVI 433
G+F DA +C+ +KS GL PS++ + + NA++Q+GL E+ V ++M ++G++P+L+
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 434 LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDL 493
LN LINAF R +EA A+ ++ E G+ PDV+TYTTLMKA IR KF K
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK--------- 681
Query: 494 LAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTVVLEQ 547
VP +Y+EM +GC PDRKAR ML+S ++Q
Sbjct: 682 ---------------------VPVVYEEMIMSGCKPDRKARSMLRSALRYMKQ 704
BLAST of Lsi07G001420 vs. TAIR 10
Match:
AT5G36300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 233.8 bits (595), Expect = 3.3e-61
Identity = 149/388 (38.40%), Postives = 192/388 (49.48%), Query Frame = 0
Query: 101 MSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADIIFQEMISFGCKPRTIV--CNALL 160
MSLLA + S+G SY IE L +L RTLEAD +F E++ F V NAL+
Sbjct: 1 MSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALV 60
Query: 161 RGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFE 220
+LRK E +W ++NEMK++ F
Sbjct: 61 SRYLRK--------------------------------------EVSWRVVNEMKKRKFR 120
Query: 221 LNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEV 280
LNSFVY K+I IY++NGMWKKA+GIV+EIR+ G+ +D IYNS+IDTFGKYG+L E L
Sbjct: 121 LNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEEL-- 180
Query: 281 FKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGE 340
Sbjct: 181 ------------------------------------------------------------ 240
Query: 341 QGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASN 400
Q+G F+D + + LKS G+ PSA+
Sbjct: 241 ----------------------------------QFGSFEDIGELVGKLKSQGVAPSANL 254
Query: 401 FCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHII 460
FC +ANA++QQGLC++TVKVL++ME EGIEPNL++LNVLINAF AG+H EAL+IYHHI
Sbjct: 301 FCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIK 254
Query: 461 E-VGISPDVITYTTLMKAFIRAKKFSKV 486
E V I PDV+TY+TLMKAF RAKK+ V
Sbjct: 361 ETVWIHPDVVTYSTLMKAFTRAKKYEMV 254
BLAST of Lsi07G001420 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 187.6 bits (475), Expect = 2.7e-47
Identity = 110/408 (26.96%), Postives = 203/408 (49.75%), Query Frame = 0
Query: 80 SSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLE-ADII 139
+S + + +++ Y ++ +D A+S++ ++ G V SY +++A R + A+ +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 140 FQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHAN 199
F+EM+ P N L+RGF G +D+A + M N TY L+D +
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 200 AGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHI 259
+++D + ++ M KG E N Y+ VI G K+ ++ E+ + G S+D+
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 260 YNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQ 319
YN++I + K G +AL + M + G+ P++ T+ SLI CKAGN+ A+E M+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 320 EQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQ 379
+G+ P+ + + TL+ ++G + + L M G S + Y L++ + G+ +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 380 DAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLI 439
DA + +K GL P ++ + + F + +E ++V + M +GI+P+ + + LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 440 NAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVL 487
F R EA +Y ++ VG+ PD TYT L+ A+ K L
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
BLAST of Lsi07G001420 vs. TAIR 10
Match:
AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 169.5 bits (428), Expect = 7.7e-42
Identity = 103/396 (26.01%), Postives = 195/396 (49.24%), Query Frame = 0
Query: 87 LIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADIIFQEMISFG 146
++ YC+ G +D L+ M+ G + Y +I L + + EA+ F EMI G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 147 CKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTW 206
P T+V L+ GF ++G + AS M DI + TY ++ G + +
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 207 SIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTF 266
+ +EM KG E +S ++++I Y G K A + + + ++G S + Y ++ID
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 267 GKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDP 326
K G L A E+ M + G+ PNI T+NS++ CK+GN+ A++L + + G++ D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 327 KIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISA 386
+ TL+ + + G+ D ++ L M +G + + + + +L++ + +G +D EK ++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 387 LKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLINAFAVAGR 446
+ + G+ P+A+ F + + + + + + M + G+ P+ L+ A
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 447 HSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 483
EA ++ + G S V TY+ L+K F++ KKF
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
BLAST of Lsi07G001420 vs. TAIR 10
Match:
AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 169.5 bits (428), Expect = 7.7e-42
Identity = 103/396 (26.01%), Postives = 195/396 (49.24%), Query Frame = 0
Query: 87 LIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADIIFQEMISFG 146
++ YC+ G +D L+ M+ G + Y +I L + + EA+ F EMI G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 147 CKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTW 206
P T+V L+ GF ++G + AS M DI + TY ++ G + +
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 207 SIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTF 266
+ +EM KG E +S ++++I Y G K A + + + ++G S + Y ++ID
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 267 GKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDP 326
K G L A E+ M + G+ PNI T+NS++ CK+GN+ A++L + + G++ D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 327 KIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISA 386
+ TL+ + + G+ D ++ L M +G + + + + +L++ + +G +D EK ++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 387 LKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLINAFAVAGR 446
+ + G+ P+A+ F + + + + + + M + G+ P+ L+ A
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 447 HSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 483
EA ++ + G S V TY+ L+K F++ KKF
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8L844 | 4.3e-90 | 36.79 | Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidop... | [more] |
A0A1D6IEG9 | 1.1e-85 | 37.15 | Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4... | [more] |
Q84ZD2 | 2.5e-85 | 36.65 | Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza... | [more] |
Q9FFZ2 | 2.0e-79 | 42.00 | Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis th... | [more] |
Q9FIX3 | 3.8e-46 | 26.96 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E3F2 | 1.7e-267 | 85.90 | pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... | [more] |
A0A6J1E8S9 | 1.7e-267 | 85.90 | pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... | [more] |
A0A0A0KZ91 | 1.5e-266 | 85.45 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025700 PE=4 SV=1 | [more] |
A0A5A7TTI3 | 1.8e-264 | 86.31 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4E032 | 3.1e-264 | 86.31 | pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
XP_038901793.1 | 3.2e-276 | 88.91 | pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... | [more] |
XP_038901745.1 | 6.1e-275 | 88.87 | pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... | [more] |
XP_038901715.1 | 6.1e-275 | 88.87 | pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... | [more] |
XP_023551942.1 | 5.5e-268 | 85.95 | pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... | [more] |
XP_023551938.1 | 5.5e-268 | 85.95 | pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
AT5G42310.1 | 3.1e-91 | 36.79 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G36300.1 | 3.3e-61 | 38.40 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G39710.1 | 2.7e-47 | 26.96 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G05670.1 | 7.7e-42 | 26.01 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G05670.2 | 7.7e-42 | 26.01 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |