Lsi07G001420 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi07G001420
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr07: 1533210 .. 1539733 (+)
RNA-Seq ExpressionLsi07G001420
SyntenyLsi07G001420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTGTTTGCGGCATGAAAATGCAATCTATTTTCTTGCCAAAAACAGTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCTTTTGTTGCATCCATGTTCTAGTAAATGTGATGGAAAGTACATGTTTGATGATGCGGCATTAAAGTTGTTTAGGAATAATGCCCTTAAAAAGGCCAGTAAAGCAGCGTTAGATGATAATTGCATTATTAGCACGAGGTGGCATGGATGTAAAGATGAAGAGGAACTATCGAGTGACTTGTGTAACTGTTTGATTCGTGATTATTGTAAGGTAGGTAATGTTGATTCTGCCATGTCTCTTCTTGCTCATATGGAGTCTGTTGGTCGTCATGCCTCTGTAGCATCTTACGCATATTTGATTGAAGCTCTTGGAAACTTAGGTAGGACTTTGGAAGCTGATATCATATTTCAAGAAATGATTAGTTTTGGTTGTAAGCCGAGAACAATTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCCTCTGACGTTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGGTTATCGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAGATAAGAAAATCAGGGATTTCTGTGGACAAACACATTTATAACAGCATCATAGATACATTTGGAAAATATGGTCAATTGTCCGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAGGATGGTGTAATGCCTAATATAACAACTTGGAATTCACTGATACAATGGAACTGTAAAGCTGGGAACCTTGCTACTGCCCTTGAGTTATTCACGGACATGCAAGAACAGGGAATGCATCCAGATCCTAAGATCTTCGTTACTCTAATAAGCTCCTTGGGTGAGCAGGGAAAGTGGGATGTGATAAAGCAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATCTTGGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGTATATCTGCTCTAAAGTCTGCAGGCCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTTCTCAACAGGTTAGATGCACATCTTTACTCTCTCTCCTTTTCTTTTTCTTTTTTTTTTTTCTTTTCTCTCCCTCTTGGGTATCATGTAAGTTCTCTAGCTACAAAGGTTAACTGAATTTTTATGGCCATGTTTTGTTGTTAGTTTGTTGTTCTCTGTGCAGAGAGATGCTGGATGTTTTAAATAGAAAAAGAAATAATGTTGATCGTGATTACTAATTTATGATAAGTTGTTTTCTTGTATTTTGGTAATCCAATGCAGGGGTTGTGTGAAGAGACTGTAAAAGTGCTTCAGCTCATGGAGGCAGAAGGAATTGAACCAAATCTTGTAATCCTGAATGTACTGATCAATGCATTTGCTGTTGCTGGTAGGCATTCGGAGGCATTAGCAATTTATCATCATATAATTGAAGTTGTAAGTCTTTATGTTCGAGAATGCAAAACCATAAACATTAGTTAAAGCCGAATGCAATCAAATTTCTTCATTTTTTGGTGTTATCAAGACAATTCTATAATTCATCCTTTATTTTACTTTGAGAAGGGTATCAGTCCTGACGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTAGTAAGGTGCTTACTTATCCTTTGACTGAGTTAATTTTTGGGCTTGATCCAAACCTTAAGTTTACTAGCCATGCGTTCCATTAACGTTGTTTACGTTCTGATGAGTTTTCTAACGTTTTTGCATGAAGTTATTCAATTCTTCTCTGTGAAACCCTGCTGATACCTTCTAAGTTTAACCATATTTGGCTAGGTTCCTGAAATATATAAAGAAATGGAAAATGCTGGTTGCACGCCAGATAGGAAAGCCAGAGAGATGTTAAAGTCCGTAACAGTGGTTCTTGAACAGAGGCATTGTAAGTTCCACCCTTTTTGTACTTGTATTTCGTAGTTTCTCAGCCAGAGCAGTCCTTGCATGATTGTTCTATAATTCTTCACCCTCTAGGTGATGGTAAATTTAGAATGTCAAGTCATAATTTGAAAAGTTCATACCTGGAGAGTGGTGCAGAAGGATTCTTCTTGAAAAATATTGCATCATCAGGCAACAAGTCTTACTGACAAGTATATTGCTATCTTTCCCATAATCTGCGACTTGCTAAGATAATTAATGTCATTTGTCAAGTCAAACTATGCCAACCTCTAAAGACATCCGAGTTTTTTTCCTTGATGGCACTTATGAAGAAGGATTAACTAACGCAATAAAAGAAGAGGTATTTAATTCTGGTATGGGGAGGGACCACATATTGAAAATGGTAAATGCTCATTGGAGTCCTGTATCTAAGTAGACACCAAAAAGACCATCTTAGGGATTAAGAGCTTTTTTGGGTTGACTTTCTAAGTGCTTAAAAACATTTTTTTTTCCACTTAAAAATACTTTTTTAAGCACTTAGTTGGTCATTTCAAACATGGCCTACATCGGTTGTCTTAGTAGTGAATTAAGTTTCATGCAGCTGAGTGAACGACCAAAGTGGGAGTAAATCTTCTACTTCCTTTGTTTTGCAAATGATGAATACTGTAATCTACTTAGAGAAAGACAGCAACTGATACTTGCTAGTGTTGAATTCTTGAATGTTTGGATCTTTTTCACTGAAAAACAGACAGATAAAAGATTAGCAGCCTTCTAAAATAGTGATTAAGGAATTGATGCACACGAAGAAAGTAGATCACAATGCCAGGTAAAAACTCACCCTATTGTCTTAGATTTTATGTGAATTTCTGGACATTCTGGTGAAGCAGTATCTATTATATCAATATGTCCTAACATTTTATGACGACATCGATGACAGGCCAACCTTCAATGGACCCTGTGGAACTAGAGGAATTAACAGTTTCTGGCAATAAGTTTGAAGATGCAATGAGGTCAATCTTGTAAGTTGTAACCATTACGATAACGATAGCATAAATTATTTTTATTTTTCTTGATGTTGTTTGAGGATGAGAATCTTATATTCTCAAAAACGGGGGAAAAATTAGATGCTACTTAGATAACAATTGAGAAGTAGTTTGTTTATTCCTCCATTTTTCATATTAAGTGAAATTCATACTTCCTTCATTCATTTTTTTCTAATTGAAAAAGAAAATTAAAAACAATAATTTATTGAAGAATAACAGACCAATAAACACGAACAACAGATTAGGACAAGGCTTTTGCAAAGAAGAAAAGTAGGGAAAGTAAAGGAAGAATAATCCAAGTTCACTTTGTTAACATTTCAACCCCAAAAAAATAATAAAATAGGATCGAACTTATCTCAGAACTGTTATGAAATTCAATTGCTTTAGAAATCCCATCAAAGAAGATCAGGATACATCTTTAGGGAAGTGGATTATGTAACTTTAAAAACTCTAACCTTTTTCGTTTGCTGTTGTTCTTACTTTTGCTGCTTCAAAAAATGATATCTGAATTGCATGTTTATATAATGTACTGTGACTGGTTACTTAGAAATATATATATATATATATATTCGAGTATGCTTGTGTAGATCAGACACCAAAGGTAAAAGTAGGGAACGAAAACATTAATCGTTCATGTATAATATTGAAAGCCTTTAAACACTTAAATATAATTTAATGTTTGATTTTAGATTTTTAAACGTAATTTTCATGTCATTAAAATTCATTTGGAAGGATTAAAAGCATGTTTTAGAGTACTTTTGAAAATGACAAAAGTGGTTTTAACTATTTCAAAATTACCCTCAGTCATACCTATATGAGCAAGCTTTCATCGATTTAATATCTCAAATCAGGTAAGCAATTGAGGAGTGATTACCAACAATCAACAATCTGCGTAGTCTACAAACTTTATTGGGCAGCTGGTGGCATAACGAAAGGTACTAAAACCATGTCTTATCTCTATGAGACTCTTTTTGTTTTGAAGAATTTTTTTTTTTTTTATCCCTAAGTTTCAAAATTTTGCATTTTTAGTCCTTAGGTTTTCCATTTGATTAAATTTTGTCAAGTTTCAAAATGTTACAATTTTACCCTTGAAGTTTGAGTTTGGTTTCAATTTGGTCCCTCTGTTTTACTTTTATTATTTAGTATTATATTACAATGTCTATGGATTAATTTAAAAAGAAAGAGTTATAATTAATTATGTTTTATTATTTTTTTATCATAATTAAAATTAATTTAAAAATTTTACTTATTAGACATTAACACCAAAGACTGAAGTGAGTAGTTTGTGAAAAATTGAGGTTTAAAAGTGTAAATATTGAACCTAGGGACTAAATTGAAACAAAATATAAATTTCAAAGGTAAATATAACATTTTAAAATATAGAGACAAATTGAAATCAAAATTAAAACTTAAAGATTAAAAGTTAACATTTTAAAACCTGGACGAACAAGCTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAACATATATATATATATATATATATATATATATATATAGAACAAAGTATTATTATATTCTTTTTGGGTTGGAAACTTGGATATCTCATTTCAATATTCCATTTGATCTGAATTTCAAATTCTCCCCCTTTTTTTATAAGGTTAATTGGAGTTTTGCTCTGCGTGAGCTGTTTTACTTTATAAAAAGCATATATATTATTATTATTTAAAATACTGACAGAATTTCAACTCGAATAATATTGGAATATTTGAATTCTTGTACTAGTTTAAAATTCCTTTGACAACTATTTTGTTTTCAAAAATCAAGATTGATTTAAAATAATTTCAAAACAGAGCTTCTAAATATTATTGCACAGCTTTAAAATTCGACAAAACAGCTCTCAGAAATCTGGGGCGTCTGTAAAAACAATTGCGAAGTTAATTTAAAAGGACAGTACTACACACACACATTTGCTGTTCTCATTTTTTACTTAAATAATATTTTTGCAGTTGTCAATTATAATTATCACTTAATTTTTTTTTATATACAATTTAGTTTAAATGTATTGTTTTTTCAAATAAAATGTGTAAAAAATTAATAACAGAATAGGTTTGGAAGTGATTTTAAAAACGAAAAAAGTAATTTTAATTATTTCAGAATTAAAATTGGTTTTGAATAATTTAAAATATGTCGTGATCTGAAAAATGATTTAAACCCAAATCATTCAAACGTACCCATATCATCAAAATTGATTTTGAATAAATAAAAACATGGTTTAAAATAGTTTTAAATATGACATAGTGATTTTAACCATTTCAAAATTACTTCCAAACATATTTTAATTTGTGGAAAAATCTTTAAAACATACACCAGAACCATCCTTCGGTACCTCCTATTTCTAAAATTCAGAAATTTATATAAAATTGTTAATCTCCTTTTTATTTTTTATTTCTTAAAAAAAGAAACTAAAGAGCCATTACCTTTTGATGGATGAAGAAAAATAGCTATAAAACCACACTATATTGCATAGTCAAACGAGAACACGAAAACATCCAACATAATATAGTTGTTACAACACCGTATAAGCATATCCTGAGGCAGATTGCGTTAGCCTTAAGCAACACAAAACTCCAAACATTTGGTACAGATAAAACAACCATCTTCTTTATTTATTTAGTAACTAGCTACTTGTTGTCTAATGTCTGATGGCCAAAAGCACAACAATGCCTGAGAACTCTAGAACCCGTGGGGCTTCTCGGAATCCTCAAGACTGGTTGGTCGGAACCAAGCCTTTTCCTCCTCCACAGCAGAGTAGTTGCCACCATCTGCTGCACGGTTGGCCACCGCTGCAGCAGGATTGTCGGTGGCCGGCCCAAAAACTCCGGTTTTTGGATGAGGAGCCCAGTATTTATCAGCAGCTTGAGGCTGAATCACATCATCAGGGACTACGGTCGGTCGAACTTGCTCGTCGAGGTTCTTGTCATATGCTGAGGTGTGAGCTGCCCTCCTGTTTCAAGGGTAAAAGTGTAAAGTCATTAAGCATATTAAGTAAATAAAAATTAAACTCAATTAAATGATAAAAGATGTAGGATTTTTGAAATCTATGTATCAAATAAATTGAATTTAAAATTCAGATGTAAAAGCGTAACTATCTAAACCTAGGTACCAACTACTCAAACCTTATGATGACAAATATATCTTTTCCCATAATTGGTTTAAATTG

mRNA sequence

TTTTTGTTTGCGGCATGAAAATGCAATCTATTTTCTTGCCAAAAACAGTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCTTTTGTTGCATCCATGTTCTAGTAAATGTGATGGAAAGTACATGTTTGATGATGCGGCATTAAAGTTGTTTAGGAATAATGCCCTTAAAAAGGCCAGTAAAGCAGCGTTAGATGATAATTGCATTATTAGCACGAGGTGGCATGGATGTAAAGATGAAGAGGAACTATCGAGTGACTTGTGTAACTGTTTGATTCGTGATTATTGTAAGGTAGGTAATGTTGATTCTGCCATGTCTCTTCTTGCTCATATGGAGTCTGTTGGTCGTCATGCCTCTGTAGCATCTTACGCATATTTGATTGAAGCTCTTGGAAACTTAGGTAGGACTTTGGAAGCTGATATCATATTTCAAGAAATGATTAGTTTTGGTTGTAAGCCGAGAACAATTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCCTCTGACGTTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGGTTATCGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAGATAAGAAAATCAGGGATTTCTGTGGACAAACACATTTATAACAGCATCATAGATACATTTGGAAAATATGGTCAATTGTCCGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAGGATGGTGTAATGCCTAATATAACAACTTGGAATTCACTGATACAATGGAACTGTAAAGCTGGGAACCTTGCTACTGCCCTTGAGTTATTCACGGACATGCAAGAACAGGGAATGCATCCAGATCCTAAGATCTTCGTTACTCTAATAAGCTCCTTGGGTGAGCAGGGAAAGTGGGATGTGATAAAGCAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATCTTGGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGTATATCTGCTCTAAAGTCTGCAGGCCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTTCTCAACAGGGGTTGTGTGAAGAGACTGTAAAAGTGCTTCAGCTCATGGAGGCAGAAGGAATTGAACCAAATCTTGTAATCCTGAATGTACTGATCAATGCATTTGCTGTTGCTGGTAGGCATTCGGAGGCATTAGCAATTTATCATCATATAATTGAAGTTGGTATCAGTCCTGACGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTAGTAAGGTGCTTACTTATCCTTTGACTGATTTACTAGCCATGCGTTCCATTAACGTTGTTTACGTTCTGATGAGTTTTCTAACGTTTTTGCATGAAGTTCCTGAAATATATAAAGAAATGGAAAATGCTGGTTGCACGCCAGATAGGAAAGCCAGAGAGATGTTAAAGTCCGTAACAGTGGTTCTTGAACAGAGGCATTACAGATAAAAGATTAGCAGCCTTCTAAAATAGTGATTAAGGAATTGATGCACACGAAGAAAGTAGATCACAATGCCAGGCCAACCTTCAATGGACCCTGTGGAACTAGAGGAATTAACAGTTTCTGGCAATAAGTTTGAAGATGCAATGAGGTCAATCTTGTAAGCAATTGAGGAGTGATTACCAACAATCAACAATCTGCGTAGTCTACAAACTTTATTGGGCAGCTGGTGGCATAACGAAAGCACAACAATGCCTGAGAACTCTAGAACCCGTGGGGCTTCTCGGAATCCTCAAGACTGGTTGGTCGGAACCAAGCCTTTTCCTCCTCCACAGCAGAGTAGTTGCCACCATCTGCTGCACGGTTGGCCACCGCTGCAGCAGGATTGTCGGTGGCCGGCCCAAAAACTCCGGTTTTTGGATGAGGAGCCCAGTATTTATCAGCAGCTTGAGGCTGAATCACATCATCAGGGACTACGGTCGGTCGAACTTGCTCGTCGAGGTTCTTGTCATATGCTGAGGTGTGAGCTGCCCTCCTGTTTCAAGGGTAAAAGTGTAAAGTCATTAAGCATATTAAGTAAATAAAAATTAAACTCAATTAAATGATAAAAGATGTAGGATTTTTGAAATCTATGTATCAAATAAATTGAATTTAAAATTCAGATGTAAAAGCGTAACTATCTAAACCTAGGTACCAACTACTCAAACCTTATGATGACAAATATATCTTTTCCCATAATTGGTTTAAATTG

Coding sequence (CDS)

ATGAAAATGCAATCTATTTTCTTGCCAAAAACAGTCATCGTATCCTCATTTGGTGGAGTATTTTCTGACCTTTTGTTGCATCCATGTTCTAGTAAATGTGATGGAAAGTACATGTTTGATGATGCGGCATTAAAGTTGTTTAGGAATAATGCCCTTAAAAAGGCCAGTAAAGCAGCGTTAGATGATAATTGCATTATTAGCACGAGGTGGCATGGATGTAAAGATGAAGAGGAACTATCGAGTGACTTGTGTAACTGTTTGATTCGTGATTATTGTAAGGTAGGTAATGTTGATTCTGCCATGTCTCTTCTTGCTCATATGGAGTCTGTTGGTCGTCATGCCTCTGTAGCATCTTACGCATATTTGATTGAAGCTCTTGGAAACTTAGGTAGGACTTTGGAAGCTGATATCATATTTCAAGAAATGATTAGTTTTGGTTGTAAGCCGAGAACAATTGTCTGCAATGCACTACTAAGAGGGTTTTTGAGAAAAGGCCTTTTAGATCTTGCCTCTGACGTTCTTGTGTTAATGAGTGATTTAGATATTCAAAAAAATCAAGAAACTTATGAAATTCTCTTGGATTATCATGCCAATGCTGGACGGTTGGAAGATACTTGGTCTATTATTAATGAGATGAAACGAAAAGGTTTTGAGCTGAACTCATTTGTGTATAGTAAGGTTATCGTTATATATCAAAACAATGGCATGTGGAAGAAAGCAGTGGGAATTGTTGATGAGATAAGAAAATCAGGGATTTCTGTGGACAAACACATTTATAACAGCATCATAGATACATTTGGAAAATATGGTCAATTGTCCGAGGCCTTAGAAGTGTTCAAAAGAATGCAACAGGATGGTGTAATGCCTAATATAACAACTTGGAATTCACTGATACAATGGAACTGTAAAGCTGGGAACCTTGCTACTGCCCTTGAGTTATTCACGGACATGCAAGAACAGGGAATGCATCCAGATCCTAAGATCTTCGTTACTCTAATAAGCTCCTTGGGTGAGCAGGGAAAGTGGGATGTGATAAAGCAGAATCTTGATAGTATGAAGCTCAGAGGGCATAAGAATAGTGGCCTAGTTTATGAAATCTTGGTAGATATTTATGGGCAGTATGGTCAATTTCAGGATGCTGAGAAGTGTATATCTGCTCTAAAGTCTGCAGGCCTTCTACCATCCGCTAGCAATTTTTGCATTATAGCAAATGCTTTTTCTCAACAGGGGTTGTGTGAAGAGACTGTAAAAGTGCTTCAGCTCATGGAGGCAGAAGGAATTGAACCAAATCTTGTAATCCTGAATGTACTGATCAATGCATTTGCTGTTGCTGGTAGGCATTCGGAGGCATTAGCAATTTATCATCATATAATTGAAGTTGGTATCAGTCCTGACGTTATAACCTACACCACCCTTATGAAGGCATTTATTCGTGCAAAGAAGTTTAGTAAGGTGCTTACTTATCCTTTGACTGATTTACTAGCCATGCGTTCCATTAACGTTGTTTACGTTCTGATGAGTTTTCTAACGTTTTTGCATGAAGTTCCTGAAATATATAAAGAAATGGAAAATGCTGGTTGCACGCCAGATAGGAAAGCCAGAGAGATGTTAAAGTCCGTAACAGTGGTTCTTGAACAGAGGCATTACAGATAA

Protein sequence

MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAALDDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTVVLEQRHYR
Homology
BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match: Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.3e-90
Identity = 174/473 (36.79%), Postives = 275/473 (58.14%), Query Frame = 0

Query: 74  KDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTL 133
           +D+ EL   L N +I  + K G+   A+ LL   ++ G  A  A+   +I AL + GRTL
Sbjct: 262 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321

Query: 134 EADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILL 193
           EA+ +F+E+   G KPRT   NALL+G+++ G L  A  ++  M    +  ++ TY +L+
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381

Query: 194 DYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGIS 253
           D + NAGR E    ++ EM+    + NSFV+S+++  +++ G W+K   ++ E++  G+ 
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441

Query: 254 VDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALEL 313
            D+  YN +IDTFGK+  L  A+  F RM  +G+ P+  TWN+LI  +CK G    A E+
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501

Query: 314 FTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQ 373
           F  M+ +G  P    +  +I+S G+Q +WD +K+ L  MK +G   + + +  LVD+YG+
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561

Query: 374 YGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVI 433
            G+F DA +C+  +KS GL PS++ +  + NA++Q+GL E+ V   ++M ++G++P+L+ 
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621

Query: 434 LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDL 493
           LN LINAF    R +EA A+  ++ E G+ PDV+TYTTLMKA IR  KF K         
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK--------- 681

Query: 494 LAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTVVLEQ 547
                                VP +Y+EM  +GC PDRKAR ML+S    ++Q
Sbjct: 682 ---------------------VPVVYEEMIMSGCKPDRKARSMLRSALRYMKQ 704

BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match: A0A1D6IEG9 (Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4577 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-85
Identity = 172/463 (37.15%), Postives = 270/463 (58.32%), Query Frame = 0

Query: 78  ELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADI 137
           E  + L + LI  + +    D+A+ LLA  +++G      +   LI ALG  GR  EA+ 
Sbjct: 225 EPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEA 284

Query: 138 IFQEMISFG-CKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYH 197
           +F E    G  KPRT   NALL+G++R   L  A  VL  MS   +  ++ TY +L+D +
Sbjct: 285 LFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 344

Query: 198 ANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDK 257
             AGR E    ++ EM+  G + +S+V+S+++  +++ G W+KA  ++ E++ SG+  D+
Sbjct: 345 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDR 404

Query: 258 HIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTD 317
           H YN +IDTFGKY  L  A++ F +M+++G+ P++ TWN+LI  +CK G    A ELF +
Sbjct: 405 HFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEE 464

Query: 318 MQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQ 377
           M+E    P    +  +I+ LGEQ  W+ ++  L  MK +G   + + Y  LVD+YG+ G+
Sbjct: 465 MRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 524

Query: 378 FQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNV 437
           +++A  CI A+K+ GL PS + +  + NA++Q+GL +  + V++ M+A+G+E ++++LN 
Sbjct: 525 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNS 584

Query: 438 LINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDLLAM 497
           LINAF    R  EA ++   + E G+ PDVITYTTLMKA IR ++F K            
Sbjct: 585 LINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDK------------ 644

Query: 498 RSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKS 540
                             VP IY+EM  +GC PDRKAR ML+S
Sbjct: 645 ------------------VPVIYEEMITSGCAPDRKARAMLRS 657

BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match: Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.5e-85
Identity = 177/483 (36.65%), Postives = 277/483 (57.35%), Query Frame = 0

Query: 58  AALDDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVA 117
           AAL D  +   R    + +  L SD    LI  + +    D+A+ LLA  +++G      
Sbjct: 202 AALLDRLLGDLRESRLEPDAPLFSD----LISAFARARLPDAALELLASAQAIGLTPRSN 261

Query: 118 SYAYLIEALGNLGRTLEADIIFQEMISFG-CKPRTIVCNALLRGFLRKGLLDLASDVLVL 177
           +   LI +LG+  R  EA+ +F E    G  KPRT   NALL+G+++ G L  A  VL  
Sbjct: 262 AVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDE 321

Query: 178 MSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGM 237
           MS   +  ++ TY +L+D +  AGR E    ++ EM+  G + +S+V+S+++  +++ G 
Sbjct: 322 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGE 381

Query: 238 WKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNS 297
           W+KA  ++ E+  SG+  D+H YN +IDTFGKY  L  A++ F RM+++G+ P++ TWN+
Sbjct: 382 WQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNT 441

Query: 298 LIQWNCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRG 357
           LI  +CK G    A+ELF +M+E         +  +I+ LGE+ +W+ ++  L  MK +G
Sbjct: 442 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 501

Query: 358 HKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETV 417
              + + Y  LVD+YG+ G+F++A  CI A+K+ GL PS + +  + NA++Q+GL +  +
Sbjct: 502 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 561

Query: 418 KVLQLMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAF 477
            V++ M A+G+E + V+LN LINAF    R +EA ++   + E G+ PDVITYTTLMKA 
Sbjct: 562 NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 621

Query: 478 IRAKKFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREM 537
           IR ++F K                              VP IY+EM  +GC PDRKAR M
Sbjct: 622 IRVEQFEK------------------------------VPVIYEEMITSGCAPDRKARAM 650

Query: 538 LKS 540
           L+S
Sbjct: 682 LRS 650

BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match: Q9FFZ2 (Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis thaliana OX=3702 GN=At5g36300 PE=3 SV=3)

HSP 1 Score: 298.1 bits (762), Expect = 2.0e-79
Identity = 176/419 (42.00%), Postives = 234/419 (55.85%), Query Frame = 0

Query: 79  LSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADII 138
           +S  + N  IR +C+ G  + AMSLLA + S+G      SY   IE L +L RTLEAD +
Sbjct: 9   ISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADAL 68

Query: 139 FQEMISFGCKPRTIV--CNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYH 198
           F E++ F       V   NAL+  +LRK                                
Sbjct: 69  FHEVVRFMIYGSYSVRLYNALVSRYLRK-------------------------------- 128

Query: 199 ANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDK 258
                 E +W ++NEMK++ F LNSFVY K+I IY++NGMWKKA+GIV+EIR+ G+ +D 
Sbjct: 129 ------EVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDV 188

Query: 259 HIYNSIIDTFGKYGQLSEALEVFKRMQQDG-VMPNITTWNSLIQWNCKAGNLATALELFT 318
            IYNS+IDTFGKYG+L E L+V +++Q+     PNI TWNSLI+W+C  G +  ALELFT
Sbjct: 189 EIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMALELFT 248

Query: 319 DMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYG 378
            +                                                          
Sbjct: 249 MI---------------------------------------------------------- 308

Query: 379 QFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILN 438
            F+D  + +  LKS G+ PSA+ FC +ANA++QQGLC++TVKVL++ME EGIEPNL++LN
Sbjct: 309 -FEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLN 330

Query: 439 VLINAFAVAGRHSEALAIYHHIIE-VGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDL 494
           VLINAF  AG+H EAL+IYHHI E V I PDV+TY+TLMKAF RAKK+  V ++ L  L
Sbjct: 369 VLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYEMVCSFYLVTL 330

BLAST of Lsi07G001420 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.8e-46
Identity = 110/408 (26.96%), Postives = 203/408 (49.75%), Query Frame = 0

Query: 80  SSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLE-ADII 139
           +S + + +++ Y ++  +D A+S++   ++ G    V SY  +++A     R +  A+ +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 140 FQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHAN 199
           F+EM+     P     N L+RGF   G +D+A  +   M       N  TY  L+D +  
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 200 AGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHI 259
             +++D + ++  M  KG E N   Y+ VI      G  K+   ++ E+ + G S+D+  
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 260 YNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQ 319
           YN++I  + K G   +AL +   M + G+ P++ T+ SLI   CKAGN+  A+E    M+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 320 EQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQ 379
            +G+ P+ + + TL+    ++G  +   + L  M   G   S + Y  L++ +   G+ +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 380 DAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLI 439
           DA   +  +K  GL P   ++  + + F +    +E ++V + M  +GI+P+ +  + LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 440 NAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVL 487
             F    R  EA  +Y  ++ VG+ PD  TYT L+ A+       K L
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match: A0A6J1E3F2 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430464 PE=4 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 1.7e-267
Identity = 469/546 (85.90%), Postives = 491/546 (89.93%), Query Frame = 0

Query: 3   MQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAALDD 62
           MQSIFLPKT IV SFGGV+S  LLH  SSKCDG+YMF DA LKLFR N LKK SKAAL D
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60

Query: 63  NCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYL 122
           N  IS RWHGCKD+EELS DLCNCLIRDYCKVGNVD+AMSLL+HME+VG HASVASY YL
Sbjct: 61  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120

Query: 123 IEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDI 182
           IEA GN+GRTLEADI+FQEMISFG  PRT VCNALLRGFLRKGLLDLASDVLVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 183 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 242
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 243 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNC 302
           IVDEIRKSGISVDKHIYNSIIDTFGKYGQL EALEVFK+MQQDGVMP+ITTWNSLIQWNC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 303 KAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGL 362
           K+GNLATALELFTDMQEQGMHPDPKIF+TLISSLGEQGKWD+IK+NLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 363 VYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLM 422
           VYEILVDIYGQYGQF+DAEKCISALKSAGLLPSASNFCIIANAF++QGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420

Query: 423 EAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 482
           EAEGIEPNLV+LNVLINAFAVAGRH EA+AIYHHI+EVGISPDVITYTTLMKA+IRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 483 SKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTV 542
                                         H+VPEIYKEME AGCTPDRKAREMLKSVTV
Sbjct: 481 ------------------------------HKVPEIYKEMERAGCTPDRKAREMLKSVTV 516

Query: 543 VLEQRH 549
           VLEQRH
Sbjct: 541 VLEQRH 516

BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match: A0A6J1E8S9 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430464 PE=4 SV=1)

HSP 1 Score: 931.4 bits (2406), Expect = 1.7e-267
Identity = 469/546 (85.90%), Postives = 491/546 (89.93%), Query Frame = 0

Query: 3   MQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAALDD 62
           MQSIFLPKT IV SFGGV+S  LLH  SSKCDG+YMF DA LKLFR N LKK SKAAL D
Sbjct: 1   MQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAVLKLFRKNGLKKVSKAALYD 60

Query: 63  NCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYL 122
           N  IS RWHGCKD+EELS DLCNCLIRDYCKVGNVD+AMSLL+HME+VG HASVASY YL
Sbjct: 61  NYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYTYL 120

Query: 123 IEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDI 182
           IEA GN+GRTLEADI+FQEMISFG  PRT VCNALLRGFLRKGLLDLASDVLVLMSDLDI
Sbjct: 121 IEAHGNVGRTLEADILFQEMISFGRMPRTTVCNALLRGFLRKGLLDLASDVLVLMSDLDI 180

Query: 183 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 242
           QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG
Sbjct: 181 QKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVG 240

Query: 243 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNC 302
           IVDEIRKSGISVDKHIYNSIIDTFGKYGQL EALEVFK+MQQDGVMP+ITTWNSLIQWNC
Sbjct: 241 IVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQWNC 300

Query: 303 KAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGL 362
           K+GNLATALELFTDMQEQGMHPDPKIF+TLISSLGEQGKWD+IK+NLDSMKLRGHKNSGL
Sbjct: 301 KSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDIIKKNLDSMKLRGHKNSGL 360

Query: 363 VYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLM 422
           VYEILVDIYGQYGQF+DAEKCISALKSAGLLPSASNFCIIANAF++QGLCEETVKVLQLM
Sbjct: 361 VYEILVDIYGQYGQFRDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLQLM 420

Query: 423 EAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 482
           EAEGIEPNLV+LNVLINAFAVAGRH EA+AIYHHI+EVGISPDVITYTTLMKA+IRAKKF
Sbjct: 421 EAEGIEPNLVMLNVLINAFAVAGRHLEAMAIYHHIVEVGISPDVITYTTLMKAYIRAKKF 480

Query: 483 SKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTV 542
                                         H+VPEIYKEME AGCTPDRKAREMLKSVTV
Sbjct: 481 ------------------------------HKVPEIYKEMERAGCTPDRKAREMLKSVTV 516

Query: 543 VLEQRH 549
           VLEQRH
Sbjct: 541 VLEQRH 516

BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match: A0A0A0KZ91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025700 PE=4 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 1.5e-266
Identity = 470/550 (85.45%), Postives = 491/550 (89.27%), Query Frame = 0

Query: 1   MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
           MKM SIFLPK  IVSSFGGVFSD LL   SSKCDGKYMFD   +KLFRNN+L  ASKA +
Sbjct: 1   MKMHSIFLPKAFIVSSFGGVFSDHLLQRGSSKCDGKYMFDGGIVKLFRNNSLNFASKAVV 60

Query: 61  DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
           DDNCIIS+RWHGC DEEELSS+ CN LIRDYCKVG+VDSAMSLLAHMESVG HA++ SY 
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLIRDYCKVGDVDSAMSLLAHMESVGLHATMTSYT 120

Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
           YLIEALGN+GRTLEADIIFQEMISFGCKPRT+VCNALLRGFLRKGLLDLAS V VLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTVVCNALLRGFLRKGLLDLASGVFVLMSDL 180

Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DI+KNQETYEILLDYH NAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
           VGIVDEIRKSGIS+DKHIYNSIIDTFGKYG LSEALEVFKRMQQDGV+P+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGHLSEALEVFKRMQQDGVVPDITTWNSLIQW 300

Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIF+TLIS LGEQGKWDVI QNLDSMKLRGHKNS
Sbjct: 301 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISFLGEQGKWDVINQNLDSMKLRGHKNS 360

Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
            LVYEILVDIYGQYGQFQDAEKCISALKSAGLL S SNFCIIANAF+QQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDAEKCISALKSAGLLASCSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
           KF+K                              VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 520

Query: 541 TVVLEQRHYR 551
           T +LEQRHYR
Sbjct: 541 TAILEQRHYR 520

BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match: A0A5A7TTI3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004510 PE=4 SV=1)

HSP 1 Score: 921.4 bits (2380), Expect = 1.8e-264
Identity = 473/548 (86.31%), Postives = 489/548 (89.23%), Query Frame = 0

Query: 1   MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
           MKMQSIFLPK  IVSSFGG FSD LLH  SSK DGKY FD A LK FRNN L  ASKAA+
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGKYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
           DDNCIIS+RWHGC DEEELSS+ CN LI DYCKVGNVDSAMSLLAHMESVG HA++ASY 
Sbjct: 61  DDNCIISSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
           YLIEALGN+GRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DI+KNQETYEILLDYH NAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
           VGIVDEIRKSGIS+DKHIYNSIIDTFGKYGQLSEALEVFKRMQQD V+P+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
           NCKAGNLATALELFTDMQEQGMHPDPKIF+TLIS L EQGKWDVIKQNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
            LVYEILVDIYGQYGQFQD EKCISALKSAGLLPS+SNFCIIANAF+QQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
           KF+K                              VPEIYKEME+AGCTPDRK REMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKVREMLKSV 517

Query: 541 TVVLEQRH 549
           T VLEQRH
Sbjct: 541 TAVLEQRH 517

BLAST of Lsi07G001420 vs. ExPASy TrEMBL
Match: A0A1S4E032 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494438 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 3.1e-264
Identity = 473/548 (86.31%), Postives = 489/548 (89.23%), Query Frame = 0

Query: 1   MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
           MKMQSIFLPK  IVSSFGG FSD LLH  SSK DG Y FD A LK FRNN L  ASKAA+
Sbjct: 1   MKMQSIFLPKAFIVSSFGG-FSDHLLHRDSSKFDGIYTFDGAILKFFRNNFLNLASKAAV 60

Query: 61  DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
           DDNCI+S+RWHGC DEEELSS+ CN LI DYCKVGNVDSAMSLLAHMESVG HA++ASY 
Sbjct: 61  DDNCIVSSRWHGCIDEEELSSESCNRLICDYCKVGNVDSAMSLLAHMESVGLHATMASYT 120

Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
           YLIEALGN+GRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNVGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DI+KNQETYEILLDYH NAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHVNAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
           VGIVDEIRKSGIS+DKHIYNSIIDTFGKYGQLSEALEVFKRMQQD V+P+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISMDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDDVVPDITTWNSLIQW 300

Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
           NCKAGNLATALELFTDMQEQGMHPDPKIF+TLIS L EQGKWDVIKQNLDSMKLRGHKNS
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFITLISFLSEQGKWDVIKQNLDSMKLRGHKNS 360

Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
            LVYEILVDIYGQYGQFQD EKCISALKSAGLLPS+SNFCIIANAF+QQGLCEETVKVLQ
Sbjct: 361 VLVYEILVDIYGQYGQFQDGEKCISALKSAGLLPSSSNFCIIANAFAQQGLCEETVKVLQ 420

Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
           KFSK                              VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFSK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 517

Query: 541 TVVLEQRH 549
           T VLEQRH
Sbjct: 541 TAVLEQRH 517

BLAST of Lsi07G001420 vs. NCBI nr
Match: XP_038901793.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X3 [Benincasa hispida] >XP_038901802.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X3 [Benincasa hispida])

HSP 1 Score: 961.4 bits (2484), Expect = 3.2e-276
Identity = 489/550 (88.91%), Postives = 507/550 (92.18%), Query Frame = 0

Query: 1   MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
           MKMQS FLPK++IVSSFGGVFSDLLL+P S KC G+YMFDDAALKLFRNNALKK SK AL
Sbjct: 1   MKMQSTFLPKSLIVSSFGGVFSDLLLNPRSIKCVGRYMFDDAALKLFRNNALKKGSKEAL 60

Query: 61  DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
           DDN IIS+RWHGC+DE ELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVG HASVASY 
Sbjct: 61  DDNHIISSRWHGCRDEAELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGLHASVASYT 120

Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
           YLIEALGNLGRTLEADI+FQEM+SFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNLGRTLEADILFQEMLSFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DI+KNQETYEILLDYHANAGRLEDTWSIINEMK+KGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHANAGRLEDTWSIINEMKQKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
           VGIVDEIRKSGISVDK IYNSI+DTFGKYGQLSEALEVFKRMQQDGVMP+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISVDKCIYNSIVDTFGKYGQLSEALEVFKRMQQDGVMPDITTWNSLIQW 300

Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
           NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHK+S
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKDS 360

Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
           GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF+QQGL EETVKVLQ
Sbjct: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFAQQGLSEETVKVLQ 420

Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEA+GIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEADGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
           KF+K                              VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 520

Query: 541 TVVLEQRHYR 551
           TVVLEQRHYR
Sbjct: 541 TVVLEQRHYR 520

BLAST of Lsi07G001420 vs. NCBI nr
Match: XP_038901745.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901752.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901759.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901767.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901775.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida] >XP_038901783.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 957.2 bits (2473), Expect = 6.1e-275
Identity = 487/548 (88.87%), Postives = 505/548 (92.15%), Query Frame = 0

Query: 1   MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
           MKMQS FLPK++IVSSFGGVFSDLLL+P S KC G+YMFDDAALKLFRNNALKK SK AL
Sbjct: 1   MKMQSTFLPKSLIVSSFGGVFSDLLLNPRSIKCVGRYMFDDAALKLFRNNALKKGSKEAL 60

Query: 61  DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
           DDN IIS+RWHGC+DE ELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVG HASVASY 
Sbjct: 61  DDNHIISSRWHGCRDEAELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGLHASVASYT 120

Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
           YLIEALGNLGRTLEADI+FQEM+SFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNLGRTLEADILFQEMLSFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DI+KNQETYEILLDYHANAGRLEDTWSIINEMK+KGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHANAGRLEDTWSIINEMKQKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
           VGIVDEIRKSGISVDK IYNSI+DTFGKYGQLSEALEVFKRMQQDGVMP+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISVDKCIYNSIVDTFGKYGQLSEALEVFKRMQQDGVMPDITTWNSLIQW 300

Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
           NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHK+S
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKDS 360

Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
           GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF+QQGL EETVKVLQ
Sbjct: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFAQQGLSEETVKVLQ 420

Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEA+GIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEADGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
           KF+K                              VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 518

Query: 541 TVVLEQRH 549
           TVVLEQRH
Sbjct: 541 TVVLEQRH 518

BLAST of Lsi07G001420 vs. NCBI nr
Match: XP_038901715.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Benincasa hispida] >XP_038901721.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Benincasa hispida] >XP_038901729.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Benincasa hispida] >XP_038901737.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 957.2 bits (2473), Expect = 6.1e-275
Identity = 487/548 (88.87%), Postives = 505/548 (92.15%), Query Frame = 0

Query: 1   MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
           MKMQS FLPK++IVSSFGGVFSDLLL+P S KC G+YMFDDAALKLFRNNALKK SK AL
Sbjct: 1   MKMQSTFLPKSLIVSSFGGVFSDLLLNPRSIKCVGRYMFDDAALKLFRNNALKKGSKEAL 60

Query: 61  DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
           DDN IIS+RWHGC+DE ELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVG HASVASY 
Sbjct: 61  DDNHIISSRWHGCRDEAELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGLHASVASYT 120

Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
           YLIEALGNLGRTLEADI+FQEM+SFGCKPRTIVCNALLRGFLRKGLLDLAS VLVLMSDL
Sbjct: 121 YLIEALGNLGRTLEADILFQEMLSFGCKPRTIVCNALLRGFLRKGLLDLASGVLVLMSDL 180

Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DI+KNQETYEILLDYHANAGRLEDTWSIINEMK+KGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 181 DIKKNQETYEILLDYHANAGRLEDTWSIINEMKQKGFELNSFVYSKVIVIYQNNGMWKKA 240

Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
           VGIVDEIRKSGISVDK IYNSI+DTFGKYGQLSEALEVFKRMQQDGVMP+ITTWNSLIQW
Sbjct: 241 VGIVDEIRKSGISVDKCIYNSIVDTFGKYGQLSEALEVFKRMQQDGVMPDITTWNSLIQW 300

Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
           NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHK+S
Sbjct: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKDS 360

Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
           GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF+QQGL EETVKVLQ
Sbjct: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFAQQGLSEETVKVLQ 420

Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEA+GIEPNLV+LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK
Sbjct: 421 LMEADGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480

Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
           KF+K                              VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 481 KFAK------------------------------VPEIYKEMESAGCTPDRKAREMLKSV 518

Query: 541 TVVLEQRH 549
           TVVLEQRH
Sbjct: 541 TVVLEQRH 518

BLAST of Lsi07G001420 vs. NCBI nr
Match: XP_023551942.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 934.1 bits (2413), Expect = 5.5e-268
Identity = 471/548 (85.95%), Postives = 493/548 (89.96%), Query Frame = 0

Query: 1   MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
           + MQSIFLPKT IV SFGGV+S  LLH  SSKCDG+YMF DA LKLFR N LKK SKAAL
Sbjct: 24  INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 83

Query: 61  DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
            DN  IS RWHGCKD+EELS DLCNCLIRDYCKVGNVD+AMSLL+HME+VG HASVASY 
Sbjct: 84  YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 143

Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
           YLIEA GN+GRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLASDVLVLMSDL
Sbjct: 144 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 203

Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIQKNQETYEILLDYHANAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 204 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 263

Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
           VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQL EALEVFK+MQQDGVMP+ITTWNSLIQW
Sbjct: 264 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 323

Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIF+TLISSLGEQGKWDVIK+NLDSMKLRGHKNS
Sbjct: 324 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 383

Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
           GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF++QGLCEETVKVL+
Sbjct: 384 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 443

Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLV+LNVLINAFAVAGRH EALAIYHHI+EVGISPDVITYTTLMKA+IRAK
Sbjct: 444 LMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAK 503

Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
           KF                              H+VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 504 KF------------------------------HKVPEIYKEMESAGCTPDRKAREMLKSV 541

Query: 541 TVVLEQRH 549
           TVVLEQRH
Sbjct: 564 TVVLEQRH 541

BLAST of Lsi07G001420 vs. NCBI nr
Match: XP_023551938.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551939.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551940.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551941.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 934.1 bits (2413), Expect = 5.5e-268
Identity = 471/548 (85.95%), Postives = 493/548 (89.96%), Query Frame = 0

Query: 1   MKMQSIFLPKTVIVSSFGGVFSDLLLHPCSSKCDGKYMFDDAALKLFRNNALKKASKAAL 60
           + MQSIFLPKT IV SFGGV+S  LLH  SSKCDG+YMF DA LKLFR N LKK SKAAL
Sbjct: 24  INMQSIFLPKTFIVYSFGGVYSGTLLHRSSSKCDGRYMFGDAILKLFRKNGLKKVSKAAL 83

Query: 61  DDNCIISTRWHGCKDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYA 120
            DN  IS RWHGCKD+EELS DLCNCLIRDYCKVGNVD+AMSLL+HME+VG HASVASY 
Sbjct: 84  YDNYTISARWHGCKDQEELSGDLCNCLIRDYCKVGNVDAAMSLLSHMEAVGLHASVASYT 143

Query: 121 YLIEALGNLGRTLEADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDL 180
           YLIEA GN+GRTLEADI+FQEMISFG KPRT VCNALLRGFLRKGLLDLASDVLVLMSDL
Sbjct: 144 YLIEAHGNVGRTLEADILFQEMISFGRKPRTTVCNALLRGFLRKGLLDLASDVLVLMSDL 203

Query: 181 DIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 240
           DIQKNQETYEILLDYHANAGRLEDTW IINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA
Sbjct: 204 DIQKNQETYEILLDYHANAGRLEDTWGIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKA 263

Query: 241 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQW 300
           VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQL EALEVFK+MQQDGVMP+ITTWNSLIQW
Sbjct: 264 VGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLPEALEVFKKMQQDGVMPDITTWNSLIQW 323

Query: 301 NCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNS 360
           NCK+GNLATALELFTDMQEQGMHPDPKIF+TLISSLGEQGKWDVIK+NLDSMKLRGHKNS
Sbjct: 324 NCKSGNLATALELFTDMQEQGMHPDPKIFITLISSLGEQGKWDVIKKNLDSMKLRGHKNS 383

Query: 361 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQ 420
           GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAF++QGLCEETVKVL+
Sbjct: 384 GLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASNFCIIANAFARQGLCEETVKVLE 443

Query: 421 LMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAK 480
           LMEAEGIEPNLV+LNVLINAFAVAGRH EALAIYHHI+EVGISPDVITYTTLMKA+IRAK
Sbjct: 444 LMEAEGIEPNLVMLNVLINAFAVAGRHLEALAIYHHIVEVGISPDVITYTTLMKAYIRAK 503

Query: 481 KFSKVLTYPLTDLLAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSV 540
           KF                              H+VPEIYKEME+AGCTPDRKAREMLKSV
Sbjct: 504 KF------------------------------HKVPEIYKEMESAGCTPDRKAREMLKSV 541

Query: 541 TVVLEQRH 549
           TVVLEQRH
Sbjct: 564 TVVLEQRH 541

BLAST of Lsi07G001420 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 3.1e-91
Identity = 174/473 (36.79%), Postives = 275/473 (58.14%), Query Frame = 0

Query: 74  KDEEELSSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTL 133
           +D+ EL   L N +I  + K G+   A+ LL   ++ G  A  A+   +I AL + GRTL
Sbjct: 262 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321

Query: 134 EADIIFQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILL 193
           EA+ +F+E+   G KPRT   NALL+G+++ G L  A  ++  M    +  ++ TY +L+
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381

Query: 194 DYHANAGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGIS 253
           D + NAGR E    ++ EM+    + NSFV+S+++  +++ G W+K   ++ E++  G+ 
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441

Query: 254 VDKHIYNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALEL 313
            D+  YN +IDTFGK+  L  A+  F RM  +G+ P+  TWN+LI  +CK G    A E+
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501

Query: 314 FTDMQEQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQ 373
           F  M+ +G  P    +  +I+S G+Q +WD +K+ L  MK +G   + + +  LVD+YG+
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561

Query: 374 YGQFQDAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVI 433
            G+F DA +C+  +KS GL PS++ +  + NA++Q+GL E+ V   ++M ++G++P+L+ 
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621

Query: 434 LNVLINAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVLTYPLTDL 493
           LN LINAF    R +EA A+  ++ E G+ PDV+TYTTLMKA IR  KF K         
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK--------- 681

Query: 494 LAMRSINVVYVLMSFLTFLHEVPEIYKEMENAGCTPDRKAREMLKSVTVVLEQ 547
                                VP +Y+EM  +GC PDRKAR ML+S    ++Q
Sbjct: 682 ---------------------VPVVYEEMIMSGCKPDRKARSMLRSALRYMKQ 704

BLAST of Lsi07G001420 vs. TAIR 10
Match: AT5G36300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 233.8 bits (595), Expect = 3.3e-61
Identity = 149/388 (38.40%), Postives = 192/388 (49.48%), Query Frame = 0

Query: 101 MSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADIIFQEMISFGCKPRTIV--CNALL 160
           MSLLA + S+G      SY   IE L +L RTLEAD +F E++ F       V   NAL+
Sbjct: 1   MSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALV 60

Query: 161 RGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTWSIINEMKRKGFE 220
             +LRK                                      E +W ++NEMK++ F 
Sbjct: 61  SRYLRK--------------------------------------EVSWRVVNEMKKRKFR 120

Query: 221 LNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTFGKYGQLSEALEV 280
           LNSFVY K+I IY++NGMWKKA+GIV+EIR+ G+ +D  IYNS+IDTFGKYG+L E L  
Sbjct: 121 LNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEEL-- 180

Query: 281 FKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDPKIFVTLISSLGE 340
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 341 QGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISALKSAGLLPSASN 400
                                             Q+G F+D  + +  LKS G+ PSA+ 
Sbjct: 241 ----------------------------------QFGSFEDIGELVGKLKSQGVAPSANL 254

Query: 401 FCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLINAFAVAGRHSEALAIYHHII 460
           FC +ANA++QQGLC++TVKVL++ME EGIEPNL++LNVLINAF  AG+H EAL+IYHHI 
Sbjct: 301 FCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIK 254

Query: 461 E-VGISPDVITYTTLMKAFIRAKKFSKV 486
           E V I PDV+TY+TLMKAF RAKK+  V
Sbjct: 361 ETVWIHPDVVTYSTLMKAFTRAKKYEMV 254

BLAST of Lsi07G001420 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 187.6 bits (475), Expect = 2.7e-47
Identity = 110/408 (26.96%), Postives = 203/408 (49.75%), Query Frame = 0

Query: 80  SSDLCNCLIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLE-ADII 139
           +S + + +++ Y ++  +D A+S++   ++ G    V SY  +++A     R +  A+ +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 140 FQEMISFGCKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHAN 199
           F+EM+     P     N L+RGF   G +D+A  +   M       N  TY  L+D +  
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 200 AGRLEDTWSIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHI 259
             +++D + ++  M  KG E N   Y+ VI      G  K+   ++ E+ + G S+D+  
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 260 YNSIIDTFGKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQ 319
           YN++I  + K G   +AL +   M + G+ P++ T+ SLI   CKAGN+  A+E    M+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 320 EQGMHPDPKIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQ 379
            +G+ P+ + + TL+    ++G  +   + L  M   G   S + Y  L++ +   G+ +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 380 DAEKCISALKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLI 439
           DA   +  +K  GL P   ++  + + F +    +E ++V + M  +GI+P+ +  + LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 440 NAFAVAGRHSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKFSKVL 487
             F    R  EA  +Y  ++ VG+ PD  TYT L+ A+       K L
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

BLAST of Lsi07G001420 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 7.7e-42
Identity = 103/396 (26.01%), Postives = 195/396 (49.24%), Query Frame = 0

Query: 87  LIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADIIFQEMISFG 146
           ++  YC+ G +D    L+  M+  G   +   Y  +I  L  + +  EA+  F EMI  G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 147 CKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTW 206
             P T+V   L+ GF ++G +  AS     M   DI  +  TY  ++      G + +  
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 207 SIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTF 266
            + +EM  KG E +S  ++++I  Y   G  K A  + + + ++G S +   Y ++ID  
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 267 GKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDP 326
            K G L  A E+   M + G+ PNI T+NS++   CK+GN+  A++L  + +  G++ D 
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 327 KIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISA 386
             + TL+ +  + G+ D  ++ L  M  +G + + + + +L++ +  +G  +D EK ++ 
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586

Query: 387 LKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLINAFAVAGR 446
           + + G+ P+A+ F  +   +  +   +    + + M + G+ P+      L+     A  
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646

Query: 447 HSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 483
             EA  ++  +   G S  V TY+ L+K F++ KKF
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682

BLAST of Lsi07G001420 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 7.7e-42
Identity = 103/396 (26.01%), Postives = 195/396 (49.24%), Query Frame = 0

Query: 87  LIRDYCKVGNVDSAMSLLAHMESVGRHASVASYAYLIEALGNLGRTLEADIIFQEMISFG 146
           ++  YC+ G +D    L+  M+  G   +   Y  +I  L  + +  EA+  F EMI  G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 147 CKPRTIVCNALLRGFLRKGLLDLASDVLVLMSDLDIQKNQETYEILLDYHANAGRLEDTW 206
             P T+V   L+ GF ++G +  AS     M   DI  +  TY  ++      G + +  
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 207 SIINEMKRKGFELNSFVYSKVIVIYQNNGMWKKAVGIVDEIRKSGISVDKHIYNSIIDTF 266
            + +EM  KG E +S  ++++I  Y   G  K A  + + + ++G S +   Y ++ID  
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 267 GKYGQLSEALEVFKRMQQDGVMPNITTWNSLIQWNCKAGNLATALELFTDMQEQGMHPDP 326
            K G L  A E+   M + G+ PNI T+NS++   CK+GN+  A++L  + +  G++ D 
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 327 KIFVTLISSLGEQGKWDVIKQNLDSMKLRGHKNSGLVYEILVDIYGQYGQFQDAEKCISA 386
             + TL+ +  + G+ D  ++ L  M  +G + + + + +L++ +  +G  +D EK ++ 
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586

Query: 387 LKSAGLLPSASNFCIIANAFSQQGLCEETVKVLQLMEAEGIEPNLVILNVLINAFAVAGR 446
           + + G+ P+A+ F  +   +  +   +    + + M + G+ P+      L+     A  
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646

Query: 447 HSEALAIYHHIIEVGISPDVITYTTLMKAFIRAKKF 483
             EA  ++  +   G S  V TY+ L+K F++ KKF
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L8444.3e-9036.79Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidop... [more]
A0A1D6IEG91.1e-8537.15Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4... [more]
Q84ZD22.5e-8536.65Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza... [more]
Q9FFZ22.0e-7942.00Putative pentatricopeptide repeat-containing protein At5g36300 OS=Arabidopsis th... [more]
Q9FIX33.8e-4626.96Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1E3F21.7e-26785.90pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
A0A6J1E8S91.7e-26785.90pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
A0A0A0KZ911.5e-26685.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025700 PE=4 SV=1[more]
A0A5A7TTI31.8e-26486.31Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4E0323.1e-26486.31pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
XP_038901793.13.2e-27688.91pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
XP_038901745.16.1e-27588.87pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
XP_038901715.16.1e-27588.87pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
XP_023551942.15.5e-26885.95pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
XP_023551938.15.5e-26885.95pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like isofor... [more]
Match NameE-valueIdentityDescription
AT5G42310.13.1e-9136.79Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G36300.13.3e-6138.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G39710.12.7e-4726.96Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05670.17.7e-4226.01Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.27.7e-4226.01Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 408..543
e-value: 1.7E-20
score: 75.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 227..407
e-value: 1.6E-40
score: 141.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 145..215
e-value: 1.7E-10
score: 42.7
coord: 31..144
e-value: 1.3E-10
score: 43.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 258..290
e-value: 1.2E-8
score: 32.6
coord: 188..220
e-value: 1.7E-6
score: 25.9
coord: 84..111
e-value: 0.0015
score: 16.6
coord: 223..255
e-value: 0.0019
score: 16.3
coord: 118..149
e-value: 1.6E-4
score: 19.7
coord: 293..325
e-value: 5.0E-7
score: 27.5
coord: 433..466
e-value: 7.5E-6
score: 23.8
coord: 153..183
e-value: 0.003
score: 15.6
coord: 399..430
e-value: 7.3E-4
score: 17.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 153..179
e-value: 0.12
score: 12.6
coord: 84..111
e-value: 9.6E-4
score: 19.2
coord: 118..147
e-value: 0.0075
score: 16.4
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 417..476
e-value: 7.1E-10
score: 38.8
coord: 243..299
e-value: 1.1E-10
score: 41.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 185..228
e-value: 1.4E-7
score: 31.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..289
score: 12.912469
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 185..219
score: 10.610596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 290..324
score: 12.232868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 395..429
score: 8.911594
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 115..149
score: 10.380408
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..464
score: 10.39137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 9.196589
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 80..114
score: 9.361008
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 47..486
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 513..549
NoneNo IPR availablePANTHERPTHR47942:SF13OS06G0710800 PROTEINcoord: 513..549
NoneNo IPR availablePANTHERPTHR47942:SF13OS06G0710800 PROTEINcoord: 47..486

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G001420.1Lsi07G001420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding