Lsi07G001170 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G001170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ethylene-responsive transcription factor 2-like
Location	chr07: 1335560 .. 1336120 (-)
RNA-Seq Expression	Lsi07G001170
Synteny	Lsi07G001170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTCTTCAATTCCCTTCACGACGCCGTCGTTTTTGGCCTTTCCCCTCTCCATTATTCCATCTCTCCGCCGGACCACCCCTCTTCCGCCGCCCTCAACCTCCACCCATTTCCCACCACCCCCGCCGCCGCCGCCGCCACCCAGATGGATTCCCAGGGAAAGCGCTACCGTGGGGTGCGGAGGCGGCCCTGGGGGAAATACGCTTCGGAGATTCGGGATCCGGCCAAGAGTGGCGCACGTGTGTGGCTTGGCACGTACGAGACTGCTGAGGACGCGGCTTTGGCTTACGATCGAGCCGCTTTCAGGATGCGCGGCAAAAAGGCCCTTCTTAACTTCCCTAACCGCATTGGCTCTGGCGACCCTCCGCCGCTTAGAGTCTCGGCTCGGCGTCGGGAACATGATATTGATAATCATATCCTTGTGCCTTTGGCTCACGGCTCGGCTAAGAGGAGAAAAGGCGCGCCTAATAAAGATGCTCAGCCCGAGTCGAGTGTGTTCCAGGTGGGGCCCTCCCAGATGTCAGTGTTGCCAGTTGGCGAGCAGCTATTGGTTAGCTAG

mRNA sequence

ATGATTCTCTTCAATTCCCTTCACGACGCCGTCGTTTTTGGCCTTTCCCCTCTCCATTATTCCATCTCTCCGCCGGACCACCCCTCTTCCGCCGCCCTCAACCTCCACCCATTTCCCACCACCCCCGCCGCCGCCGCCGCCACCCAGATGGATTCCCAGGGAAAGCGCTACCGTGGGGTGCGGAGGCGGCCCTGGGGGAAATACGCTTCGGAGATTCGGGATCCGGCCAAGAGTGGCGCACGTGTGTGGCTTGGCACGTACGAGACTGCTGAGGACGCGGCTTTGGCTTACGATCGAGCCGCTTTCAGGATGCGCGGCAAAAAGGCCCTTCTTAACTTCCCTAACCGCATTGGCTCTGGCGACCCTCCGCCGCTTAGAGTCTCGGCTCGGCGTCGGGAACATGATATTGATAATCATATCCTTGTGCCTTTGGCTCACGGCTCGGCTAAGAGGAGAAAAGGCGCGCCTAATAAAGATGCTCAGCCCGAGTCGAGTGTGTTCCAGGTGGGGCCCTCCCAGATGTCAGTGTTGCCAGTTGGCGAGCAGCTATTGGTTAGCTAG

Coding sequence (CDS)

ATGATTCTCTTCAATTCCCTTCACGACGCCGTCGTTTTTGGCCTTTCCCCTCTCCATTATTCCATCTCTCCGCCGGACCACCCCTCTTCCGCCGCCCTCAACCTCCACCCATTTCCCACCACCCCCGCCGCCGCCGCCGCCACCCAGATGGATTCCCAGGGAAAGCGCTACCGTGGGGTGCGGAGGCGGCCCTGGGGGAAATACGCTTCGGAGATTCGGGATCCGGCCAAGAGTGGCGCACGTGTGTGGCTTGGCACGTACGAGACTGCTGAGGACGCGGCTTTGGCTTACGATCGAGCCGCTTTCAGGATGCGCGGCAAAAAGGCCCTTCTTAACTTCCCTAACCGCATTGGCTCTGGCGACCCTCCGCCGCTTAGAGTCTCGGCTCGGCGTCGGGAACATGATATTGATAATCATATCCTTGTGCCTTTGGCTCACGGCTCGGCTAAGAGGAGAAAAGGCGCGCCTAATAAAGATGCTCAGCCCGAGTCGAGTGTGTTCCAGGTGGGGCCCTCCCAGATGTCAGTGTTGCCAGTTGGCGAGCAGCTATTGGTTAGCTAG

Protein sequence

MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGVRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSGDPPPLRVSARRREHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLPVGEQLLVS

Homology

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BLAST of Lsi07G001170 vs. ExPASy Swiss-Prot
Match: Q9LW50 (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.6e-39
Identity = 95/197 (48.22%), Postives = 126/197 (63.96%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSI----SPPDHPSSAALNLHPFPTTPAAAAATQ-MDSQGK 60
           M+++  L DA+  G +P + +     + P      A +  P    PA     Q +  +G+
Sbjct: 42  MVIYGLLSDALTTGWTPFNLTSTEIKAEPREEIEPATSPVPSVAPPAETTTAQAVVPKGR 101

Query: 61  RYRGVRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPN 120
            YRGVR+RPWGK+A+EIRDPAK+GARVWLGTYETAE+AALAYD+AA+RMRG KALLNFP+
Sbjct: 102 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPH 161

Query: 121 RIGSGDPPPLRVSARRREHDIDNHILVPLAHGS--AKRRKGAPNKDA----QPESSVFQV 180
           RIG  +P P+R++ +RR  +  +  + P +  S   +RRK    K A    Q  S+V QV
Sbjct: 162 RIGLNEPEPVRLTVKRRSPEPASSSISPASENSLPKRRRKAVAAKQAELEVQSRSNVMQV 221

Query: 181 GPSQMSVLPVGEQLLVS 187
           G  QM   PVGEQLLVS
Sbjct: 222 G-CQMEQFPVGEQLLVS 237

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BLAST of Lsi07G001170 vs. ExPASy Swiss-Prot
Match: Q40479 (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.6e-39
Identity = 96/200 (48.00%), Postives = 128/200 (64.00%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYS-----ISPPDHPSSAALNLHPFPTTPAAAAATQMDS--- 60
           M+++  L DA+  G +P + +       P +    A +   P P+    A  T   +   
Sbjct: 38  MVIYGLLSDALTAGWTPFNLTSTEIKAEPREEIEPATI---PVPSVAPPAETTTAQAVVP 97

Query: 61  QGKRYRGVRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLN 120
           +G+ YRGVR+RPWGK+A+EIRDPAK+GARVWLGTYETAE+AALAYD+AA+RMRG KALLN
Sbjct: 98  KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLN 157

Query: 121 FPNRIGSGDPPPLRVSARRREHD-IDNHILVPLAHGSAKRRKGA-----PNKDAQPESSV 180
           FP+RIG  +P P+R++A+RR  +   + I   L +GS KRR+ A        + Q  S+ 
Sbjct: 158 FPHRIGLNEPEPVRLTAKRRSPEPASSSISSALENGSPKRRRKAVAAKKAELEVQSRSNA 217

Query: 181 FQVGPSQMSVLPVGEQLLVS 187
            QVG  QM   PVGEQLLVS
Sbjct: 218 MQVG-CQMEQFPVGEQLLVS 233

[Close]

BLAST of Lsi07G001170 vs. ExPASy Swiss-Prot
Match: Q84XB3 (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33
Identity = 87/182 (47.80%), Postives = 114/182 (62.64%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSIS----PPDHPSSAALNLHPFPTTPAAAAATQMDSQGKR 60
           M+++  L DA   G +P + +       P      A++    P T A AA   +  +G+ 
Sbjct: 50  MVIYGFLQDAFSIGWTPSNLTSEEVKLEPREEIEPAMSTSVSPPTVAPAA---LQPKGRH 109

Query: 61  YRGVRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNR 120
           YRGVR+RPWGK+A+EIRDPAK+GARVWLGTYE+AE+AALAY +AAFRMRG KALLNFP+R
Sbjct: 110 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHR 169

Query: 121 IGSGDPPPLRVSARRR-EHDIDNHILVPLAHGSAK-RRKGAPNKDAQPESSVFQVGPSQM 177
           IG  +P P+RV+ +RR      + +      GS K RRKG   K A+ E  V   GP+ M
Sbjct: 170 IGLNEPEPVRVTVKRRLSESASSSVSSASESGSPKRRRKGVAAKQAELE--VESRGPNVM 226

[Close]

BLAST of Lsi07G001170 vs. ExPASy Swiss-Prot
Match: Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33
Identity = 87/190 (45.79%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISP-PDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRG 60
           M+++  L DA+  G SP ++S            + + P  TT A AA      +G+ YRG
Sbjct: 51  MVIYTLLKDALNVGWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAEL---PRGRHYRG 110

Query: 61  VRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGS 120
           VRRRPWGK+A+EIRDPAK+GARVWLGTYET E+AA+AYD+AA+RMRG KA LNFP+RIG 
Sbjct: 111 VRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGL 170

Query: 121 GDPPPLRVSARRR---EHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSV 180
            +P P+RV+A+RR   E    +    P     A   + +   + + +S+V Q G  Q+ +
Sbjct: 171 NEPEPVRVTAKRRASPEPASSSENSSPKRRRKAVATEKSEAVEVESKSNVLQTG-CQVEL 230

Query: 181 LPVGEQLLVS 187
           L    QLLVS
Sbjct: 231 LTRRHQLLVS 236

[Close]

BLAST of Lsi07G001170 vs. ExPASy Swiss-Prot
Match: O80337 (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 4.0e-32
Identity = 82/168 (48.81%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYS------------ISPPDHPSSAALNLHPF---PTTPAAA 60
           M+++  L+DA   G  P   S            I  P+  S AA++  P     T+P +A
Sbjct: 81  MLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPE--SFAAVDSVPVKKEKTSPVSA 140

Query: 61  AATQMDSQGKRYRGVRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMR 120
           A T   ++GK YRGVR+RPWGK+A+EIRDPAK+GARVWLGT+ETAEDAALAYDRAAFRMR
Sbjct: 141 AVTA--AKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMR 200

Query: 121 GKKALLNFPNRIGSGDPPPLRVSARRREHDIDNHILVPLAHGSAKRRK 154
           G +ALLNFP R+ SG+P P+R+ ++R      N       +G+ K+R+
Sbjct: 201 GSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNE------NGAPKKRR 238

[Close]

BLAST of Lsi07G001170 vs. ExPASy TrEMBL
Match: A0A6J1E4I1 (ethylene-responsive transcription factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430683 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.9e-74
Identity = 154/186 (82.80%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           M++FNSLHDAVVF LSPLH SI PPD  +S+AL+L PFPTT A AA  QMD + KRYRGV
Sbjct: 47  MVIFNSLHDAVVFVLSPLH-SIHPPD--ASSALHLDPFPTTTAPAA--QMDDKSKRYRGV 106

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRG KALLNFPNRIGS 
Sbjct: 107 RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGSKALLNFPNRIGSD 166

Query: 121 DPPPLRVSARRREHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLPVG 180
           DPPPLRVSARRREHD    ILVPLA GSAKRRKGA NK A+PESS FQVGPSQ++ LPVG
Sbjct: 167 DPPPLRVSARRREHD----ILVPLADGSAKRRKGAANKKAEPESSKFQVGPSQIAALPVG 223

Query: 181 EQLLVS 187
           EQLLVS
Sbjct: 227 EQLLVS 223

[Close]

BLAST of Lsi07G001170 vs. ExPASy TrEMBL
Match: A0A6J1J528 (ethylene-responsive transcription factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483495 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.7e-70
Identity = 148/186 (79.57%), Postives = 159/186 (85.48%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           M++FNSLHDAVVF LSPLH SI PPD  +S+AL+L PFPTT   AA  QM  + KRYRGV
Sbjct: 47  MVIFNSLHDAVVFVLSPLH-SIHPPD--ASSALHLDPFPTTTTPAA--QMGDKSKRYRGV 106

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYD+AAFRMRG KALLNFPNRIGS 
Sbjct: 107 RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDQAAFRMRGSKALLNFPNRIGSD 166

Query: 121 DPPPLRVSARRREHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLPVG 180
           DPPPLRVSARRREHD    ILVPLA GSAKRRKGA N  A+PESS  QVGPSQM+ LPVG
Sbjct: 167 DPPPLRVSARRREHD----ILVPLADGSAKRRKGAANIKAEPESSKSQVGPSQMAALPVG 223

Query: 181 EQLLVS 187
           E+LLV+
Sbjct: 227 EKLLVN 223

[Close]

BLAST of Lsi07G001170 vs. ExPASy TrEMBL
Match: A0A6J1CHX1 (ethylene-responsive transcription factor 2-like OS=Momordica charantia OX=3673 GN=LOC111011655 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.6e-55
Identity = 125/188 (66.49%), Postives = 144/188 (76.60%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           MI+FNSLHDAVVFGLSPLH S +    P+   +   P  + P  A +  +  +G+ YRGV
Sbjct: 35  MIVFNSLHDAVVFGLSPLHSSSAAAQLPT---VKPDPGFSAPTKALSPPLGCRGQHYRGV 94

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           RRRPWGKYA+EIRDPAKSGARVWLGTYETAEDAALAYDRAAF+MRG KALLNFPNRIGSG
Sbjct: 95  RRRPWGKYAAEIRDPAKSGARVWLGTYETAEDAALAYDRAAFQMRGSKALLNFPNRIGSG 154

Query: 121 DPPPLRVSARRREHDIDNHILVP--LAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLP 180
           DPPP RVSARRR+HD+   I+    LA+ SAKRRK   NK+A+P      V  SQM++LP
Sbjct: 155 DPPPHRVSARRRQHDL---IITTQGLANASAKRRKATANKEAKP------VRDSQMAMLP 210

Query: 181 VGEQLLVS 187
           VGEQLLVS
Sbjct: 215 VGEQLLVS 210

[Close]

BLAST of Lsi07G001170 vs. ExPASy TrEMBL
Match: A0A6J1AHF7 (ethylene-responsive transcription factor 2-like OS=Herrania umbratica OX=108875 GN=LOC110417957 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 7.1e-40
Identity = 108/232 (46.55%), Postives = 143/232 (61.64%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSI------SPPDHPSSAALNLHPFP-TTPAAAAATQM--- 60
           MI++NSLH+A+ FG SP   S+      + P+  +   + + P   T PAAA ATQM   
Sbjct: 45  MIIYNSLHEALNFGWSPTSDSMVAASVKAEPEMMTGPVMEVSPMGLTQPAAATATQMLFG 104

Query: 61  -----------------------------DSQGKRYRGVRRRPWGKYASEIRDPAKSGAR 120
                                          +G+ YRGVR+RPWGK+A+EIRDPAK+GAR
Sbjct: 105 SAFMGISSENRSSFLMGKQEKCFRNGNQKVVKGRHYRGVRQRPWGKFAAEIRDPAKNGAR 164

Query: 121 VWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSGDPPPLRVSARRREHDIDNHIL 180
           VWLGTYETAE+AALAYDRAA+RMRG +ALLNFP+RIG+ +P P+RV+A+RREHD      
Sbjct: 165 VWLGTYETAEEAALAYDRAAYRMRGSRALLNFPHRIGNNEPEPVRVTAKRREHD------ 224

Query: 181 VPLAHGSA--KRRKGAPNKDAQPES-----SVFQVGPSQMSVLPVGEQLLVS 187
            P  + S+  KR+K     +A+ E      +VFQ+G  QM ++PVGEQLLV+
Sbjct: 225 -PALYNSSSPKRKKSLAANEAELERDSRGLTVFQLG-HQMGLMPVGEQLLVN 268

[Close]

BLAST of Lsi07G001170 vs. ExPASy TrEMBL
Match: F6I2N7 (AP2/ERF domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_16s0013g00890 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 9.3e-40
Identity = 97/185 (52.43%), Postives = 124/185 (67.03%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           M+L+  L DAV  G +P  + + PP             P  P   AA    S+G+ YRGV
Sbjct: 65  MVLYGVLRDAVSVGWTP--FGLPPPPEVKEEPREEVAAPAMPEVRAA---PSRGRHYRGV 124

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           R+RPWGK+A+EIRDPAK+GARVWLGTYETAE+AA+AYDRAA+RMRG +ALLNFP+R+GSG
Sbjct: 125 RQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAAVAYDRAAYRMRGSRALLNFPHRVGSG 184

Query: 121 DPPPLRVSARRREHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLPVG 180
           +P P+R++A+RR  + +         GS KR K     + +  S+VFQVG  QM  LPVG
Sbjct: 185 EPDPVRITAKRRSPEPE----PSPESGSPKRLKNGLAAEVERRSNVFQVG-HQMGALPVG 239

Query: 181 EQLLV 186
           EQLLV
Sbjct: 245 EQLLV 239

[Close]

BLAST of Lsi07G001170 vs. NCBI nr
Match: XP_022922814.1 (ethylene-responsive transcription factor 2-like [Cucurbita moschata])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 154/186 (82.80%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           M++FNSLHDAVVF LSPLH SI PPD  +S+AL+L PFPTT A AA  QMD + KRYRGV
Sbjct: 47  MVIFNSLHDAVVFVLSPLH-SIHPPD--ASSALHLDPFPTTTAPAA--QMDDKSKRYRGV 106

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRG KALLNFPNRIGS 
Sbjct: 107 RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGSKALLNFPNRIGSD 166

Query: 121 DPPPLRVSARRREHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLPVG 180
           DPPPLRVSARRREHD    ILVPLA GSAKRRKGA NK A+PESS FQVGPSQ++ LPVG
Sbjct: 167 DPPPLRVSARRREHD----ILVPLADGSAKRRKGAANKKAEPESSKFQVGPSQIAALPVG 223

Query: 181 EQLLVS 187
           EQLLVS
Sbjct: 227 EQLLVS 223

[Close]

BLAST of Lsi07G001170 vs. NCBI nr
Match: KAG6576826.1 (Ethylene-responsive transcription factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.0 bits (728), Expect = 4.5e-73
Identity = 153/186 (82.26%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           M++FNSLHDAVVF LSPLH SI PPD  +S+AL+L PFPTT A AA  QMD + KRYRGV
Sbjct: 47  MVIFNSLHDAVVFVLSPLH-SIHPPD--ASSALHLDPFPTTTAPAA--QMDDKSKRYRGV 106

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRG KALLNFPNRIGS 
Sbjct: 107 RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGSKALLNFPNRIGSD 166

Query: 121 DPPPLRVSARRREHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLPVG 180
           DPPPLRVSARRREHD    ILVPLA GSAKRRKGA NK A+PESS FQVGPSQ++ LPVG
Sbjct: 167 DPPPLRVSARRREHD----ILVPLADGSAKRRKGAANKKAEPESSKFQVGPSQIATLPVG 223

Query: 181 EQLLVS 187
           +QLLVS
Sbjct: 227 DQLLVS 223

[Close]

BLAST of Lsi07G001170 vs. NCBI nr
Match: XP_023552990.1 (ethylene-responsive transcription factor 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 153/187 (81.82%), Postives = 161/187 (86.10%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPS-SAALNLHPFPTTPAAAAATQMDSQGKRYRG 60
           M++FNSLHDAVVF LSPLH SI PPD  S S+AL+L PFPTT A AA  QM  + KRYRG
Sbjct: 47  MVIFNSLHDAVVFVLSPLH-SIHPPDASSASSALHLDPFPTTTAPAA--QMGDKSKRYRG 106

Query: 61  VRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGS 120
           VRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRG KALLNFPNRIGS
Sbjct: 107 VRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGSKALLNFPNRIGS 166

Query: 121 GDPPPLRVSARRREHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLPV 180
            DPPPLRVSARRREHD    ILVPLA  SAKRRKGA NK A+PESS FQVGPSQ++ LPV
Sbjct: 167 DDPPPLRVSARRREHD----ILVPLADESAKRRKGAANKKAEPESSKFQVGPSQIAALPV 226

Query: 181 GEQLLVS 187
           GEQLLVS
Sbjct: 227 GEQLLVS 226

[Close]

BLAST of Lsi07G001170 vs. NCBI nr
Match: XP_022985507.1 (ethylene-responsive transcription factor 2-like [Cucurbita maxima])

HSP 1 Score: 273.1 bits (697), Expect = 1.8e-69
Identity = 148/186 (79.57%), Postives = 159/186 (85.48%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           M++FNSLHDAVVF LSPLH SI PPD  +S+AL+L PFPTT   AA  QM  + KRYRGV
Sbjct: 47  MVIFNSLHDAVVFVLSPLH-SIHPPD--ASSALHLDPFPTTTTPAA--QMGDKSKRYRGV 106

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYD+AAFRMRG KALLNFPNRIGS 
Sbjct: 107 RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDQAAFRMRGSKALLNFPNRIGSD 166

Query: 121 DPPPLRVSARRREHDIDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLPVG 180
           DPPPLRVSARRREHD    ILVPLA GSAKRRKGA N  A+PESS  QVGPSQM+ LPVG
Sbjct: 167 DPPPLRVSARRREHD----ILVPLADGSAKRRKGAANIKAEPESSKSQVGPSQMAALPVG 223

Query: 181 EQLLVS 187
           E+LLV+
Sbjct: 227 EKLLVN 223

[Close]

BLAST of Lsi07G001170 vs. NCBI nr
Match: XP_038902085.1 (ethylene-responsive transcription factor 2-like [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 5.2e-69
Identity = 146/188 (77.66%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           MILFNSLHDAVVFGLSPLH+         S      P PT P            KRYRGV
Sbjct: 36  MILFNSLHDAVVFGLSPLHH--------YSXXXATAPAPTRP------------KRYRGV 95

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRG KALLNFPNRIGSG
Sbjct: 96  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGSKALLNFPNRIGSG 155

Query: 121 DPPPLRVSARRREHD--IDNHILVPLAHGSAKRRKGAPNKDAQPESSVFQVGPSQMSVLP 180
           DPPPLRVS RRREHD    NH LVPLAHGSAKRRKGA NKDAQPESSVFQVGP+QM++LP
Sbjct: 156 DPPPLRVSPRRREHDNHNHNHTLVPLAHGSAKRRKGAANKDAQPESSVFQVGPTQMTILP 203

Query: 181 VGEQLLVS 187
           +GEQLLVS
Sbjct: 216 LGEQLLVS 203

[Close]

BLAST of Lsi07G001170 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 139.4 bits (350), Expect = 2.9e-33
Identity = 82/168 (48.81%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYS------------ISPPDHPSSAALNLHPF---PTTPAAA 60
           M+++  L+DA   G  P   S            I  P+  S AA++  P     T+P +A
Sbjct: 81  MLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPE--SFAAVDSVPVKKEKTSPVSA 140

Query: 61  AATQMDSQGKRYRGVRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMR 120
           A T   ++GK YRGVR+RPWGK+A+EIRDPAK+GARVWLGT+ETAEDAALAYDRAAFRMR
Sbjct: 141 AVTA--AKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMR 200

Query: 121 GKKALLNFPNRIGSGDPPPLRVSARRREHDIDNHILVPLAHGSAKRRK 154
           G +ALLNFP R+ SG+P P+R+ ++R      N       +G+ K+R+
Sbjct: 201 GSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNE------NGAPKKRR 238

[Close]

BLAST of Lsi07G001170 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 132.5 bits (332), Expect = 3.5e-31
Identity = 79/180 (43.89%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 5   NSLHDAVVFGL--SPLHYSISPPDHP---SSAALNLHPFPTTPA-------AAAATQMDS 64
           N   D +V+GL     H+  S  D        A+ + P     A       A   T+   
Sbjct: 53  NDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKKAIPVTETAV 112

Query: 65  QGKRYRGVRRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLN 124
           + K YRGVR+RPWGK+A+EIRDPAK+GARVWLGT+ETAEDAALAYD AAFRMRG +ALLN
Sbjct: 113 KAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLN 172

Query: 125 FPNRIGSGDPPPLRVSARRREHDIDNHILVPLA--HGSAKRRKGAPNKDAQPESSVFQVG 171
           FP R+ SG+P P+R++++R      +      +  +G  KRR+ A N  ++      +VG
Sbjct: 173 FPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKAENLTSEVVQVKCEVG 232

[Close]

BLAST of Lsi07G001170 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 130.2 bits (326), Expect = 1.7e-30
Identity = 73/132 (55.30%), Postives = 89/132 (67.42%), Query Frame = 0


Query: 1   MILFNSLHDAVVFGLSPLHYSISPPDHPSSAALNLHPFPTTPAAAAATQMDSQGKRYRGV 60
           M ++N+L DAV  G +P     S P   S A  N  P      + A  Q   +G +YRGV
Sbjct: 44  MAIYNTLRDAVSSGWTP-----SVPPVTSPAEENKPPATKASGSHAPRQ---KGMQYRGV 103

Query: 61  RRRPWGKYASEIRDPAKSGARVWLGTYETAEDAALAYDRAAFRMRGKKALLNFPNRIGSG 120
           RRRPWGK+A+EIRDP K+GARVWLGTYET EDAA+AYDRAAF++RG KA LNFP+ IGS 
Sbjct: 104 RRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSC 163

Query: 121 DPPPLRVSARRR 133
              P+R+  RRR
Sbjct: 164 KYEPVRIRPRRR 167

[Close]

BLAST of Lsi07G001170 vs. TAIR 10
Match: AT5G47230.1 (ethylene responsive element binding factor 5 )

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23
Identity = 56/112 (50.00%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 31  AALNLHPFPTTPAAAAATQMDSQGKRYRGVRRRPWGKYASEIRDPAKSGARVWLGTYETA 90
           AA N  P  T P +      + + K YRGVR+RPWGK+A+EIRDP K G+RVWLGT++TA
Sbjct: 136 AAENTKPEVTKPVS------EEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTA 195

Query: 91  EDAALAYDRAAFRMRGKKALLNFPNRIGSGDPPPLRVSARRREHDIDNHILV 143
            +AA AYD AAFR+RG KA+LNFP  +G    P      ++R+ D D  + V
Sbjct: 196 IEAARAYDEAAFRLRGSKAILNFPLEVGKW-KPRADEGEKKRKRDDDEKVTV 240

[Close]

BLAST of Lsi07G001170 vs. TAIR 10
Match: AT5G61590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 29  SSAALNLHPFPTTPAAAAATQMDSQGKRYRGVRRRPWGKYASEIRDPAKSGARVWLGTYE 88
           SS++    P   T +    T+   + + YRGVRRRPWGK+A+EIRDPAK G+R+WLGT+E
Sbjct: 79  SSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFE 138

Query: 89  TAEDAALAYDRAAFRMRGKKALLNFPNRIGSGDPPPLRVSARRR 133
           +  DAA AYD AAF++RG+KA+LNFP   G  D P      RRR
Sbjct: 139 SDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRR 182

The following BLAST results are available for this feature:

BLAST of Lsi07G001170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW50	7.6e-39	48.22	Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q40479	7.6e-39	48.00	Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 ...	[more]
Q84XB3	1.3e-33	47.80	Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ER...	[more]
Q40476	1.3e-33	45.79	Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ...	[more]
O80337	4.0e-32	48.81	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=E...	[more]

BLAST of Lsi07G001170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4I1	9.9e-74	82.80	ethylene-responsive transcription factor 2-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J528	8.7e-70	79.57	ethylene-responsive transcription factor 2-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CHX1	1.6e-55	66.49	ethylene-responsive transcription factor 2-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1AHF7	7.1e-40	46.55	ethylene-responsive transcription factor 2-like OS=Herrania umbratica OX=108875 ...	[more]
F6I2N7	9.3e-40	52.43	AP2/ERF domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_16s0013g0089...	[more]

BLAST of Lsi07G001170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922814.1	2.0e-73	82.80	ethylene-responsive transcription factor 2-like [Cucurbita moschata]	[more]
KAG6576826.1	4.5e-73	82.26	Ethylene-responsive transcription factor 2, partial [Cucurbita argyrosperma subs...	[more]
XP_023552990.1	1.1e-71	81.82	ethylene-responsive transcription factor 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985507.1	1.8e-69	79.57	ethylene-responsive transcription factor 2-like [Cucurbita maxima]	[more]
XP_038902085.1	5.2e-69	77.66	ethylene-responsive transcription factor 2-like [Benincasa hispida]	[more]

BLAST of Lsi07G001170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17500.1	2.9e-33	48.81	ethylene responsive element binding factor 1	[more]
AT5G47220.1	3.5e-31	43.89	ethylene responsive element binding factor 2	[more]
AT2G44840.1	1.7e-30	55.30	ethylene-responsive element binding factor 13	[more]
AT5G47230.1	1.6e-23	50.00	ethylene responsive element binding factor 5	[more]
AT5G61590.1	2.1e-23	51.92	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 57..68 score: 71.67 coord: 80..96 score: 65.56
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 56..120 e-value: 1.2E-36 score: 137.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 56..106 e-value: 2.4E-13 score: 50.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 56..114 score: 24.434111
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 55..115 e-value: 3.78987E-32 score: 108.513
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 55..116 e-value: 8.2E-28 score: 98.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..169
None	No IPR available	PANTHER	PTHR31190:SF128	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1	coord: 45..131
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 45..131
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 56..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G001170.1	Lsi07G001170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity