Lsi07G000510 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G000510
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	calmodulin-like protein 3
Location	chr07: 549398 .. 549850 (+)
RNA-Seq Expression	Lsi07G000510
Synteny	Lsi07G000510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGACGGAACTACGAAGAGTGTTTCAGATGTTCGATCGCAACGGCGACGGCCGGATCACCAAGAAGGAATTAAGCGACTCCTTGGAGAATTTGGGGATTTTCATTCCCGATAAAGATCTGACTCAAATGATTGAGAAAATCGACGTTAATGGCGATGGATGTGTCGATATCGATGAGTTCGGAGAGCTGTACCAGTCGATTATGGACGAGCGAGACGAGGAGGAAGACATGAGAGAAGCCTTCAATGTCTTCGATCAGAACGGCGATGGATTCATCACCGTCGACGAATTGAGGTCAGTTCTAGCTTCCTTGGGTCTTAAGCAAGGGAGAACTGTAGAGGATTGCAAGAAGATGATTATGAAGGTGGATGTGGATGGAGATGGAATGGTGAATTACAAGGAGTTTAAGCAAATGATGAAGGGAGGTGGATTTAGTGCGTTAGGTTGA

mRNA sequence

ATGGATCCGACGGAACTACGAAGAGTGTTTCAGATGTTCGATCGCAACGGCGACGGCCGGATCACCAAGAAGGAATTAAGCGACTCCTTGGAGAATTTGGGGATTTTCATTCCCGATAAAGATCTGACTCAAATGATTGAGAAAATCGACGTTAATGGCGATGGATGTGTCGATATCGATGAGTTCGGAGAGCTGTACCAGTCGATTATGGACGAGCGAGACGAGGAGGAAGACATGAGAGAAGCCTTCAATGTCTTCGATCAGAACGGCGATGGATTCATCACCGTCGACGAATTGAGGTCAGTTCTAGCTTCCTTGGGTCTTAAGCAAGGGAGAACTGTAGAGGATTGCAAGAAGATGATTATGAAGGTGGATGTGGATGGAGATGGAATGGTGAATTACAAGGAGTTTAAGCAAATGATGAAGGGAGGTGGATTTAGTGCGTTAGGTTGA

Coding sequence (CDS)

ATGGATCCGACGGAACTACGAAGAGTGTTTCAGATGTTCGATCGCAACGGCGACGGCCGGATCACCAAGAAGGAATTAAGCGACTCCTTGGAGAATTTGGGGATTTTCATTCCCGATAAAGATCTGACTCAAATGATTGAGAAAATCGACGTTAATGGCGATGGATGTGTCGATATCGATGAGTTCGGAGAGCTGTACCAGTCGATTATGGACGAGCGAGACGAGGAGGAAGACATGAGAGAAGCCTTCAATGTCTTCGATCAGAACGGCGATGGATTCATCACCGTCGACGAATTGAGGTCAGTTCTAGCTTCCTTGGGTCTTAAGCAAGGGAGAACTGTAGAGGATTGCAAGAAGATGATTATGAAGGTGGATGTGGATGGAGATGGAATGGTGAATTACAAGGAGTTTAAGCAAATGATGAAGGGAGGTGGATTTAGTGCGTTAGGTTGA

Protein sequence

MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDIDEFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSALG

Homology

[Close]

BLAST of Lsi07G000510 vs. ExPASy Swiss-Prot
Match: Q9SRR7 (Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.4e-69
Identity = 128/150 (85.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MD  EL R+FQMFDRNGDG+ITK+EL+DSLENLGI+IPDKDL QMIEKID+NGDG VDI+
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IM+ERDEEEDMREAFNVFDQN DGFITV+ELRSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

[Close]

BLAST of Lsi07G000510 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-67
Identity = 124/150 (82.67%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTEL+RVFQMFD+NGDG IT KELS++L +LGI+IPDK+LTQMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERD-EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKK 120
           EFGELY++IMDE D EEEDM+EAFNVFDQNGDGFITVDEL++VL+SLGLKQG+T++DCKK
Sbjct: 61  EFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKK 120

Query: 121 MIMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           MI KVDVDGDG VNYKEF+QMMKGGGF++L
Sbjct: 121 MIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150

[Close]

BLAST of Lsi07G000510 vs. ExPASy Swiss-Prot
Match: O22845 (Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 3.6e-63
Identity = 118/153 (77.12%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           +DP+EL+RVFQMFD+NGDGRITK+EL+DSLENLGI+IPDKDLTQMI KID NGDGCVDID
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGELYQSIMDE-----RDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVE 120
           EF  LY SI+DE       EEEDM++AFNVFDQ+GDGFITV+EL+SV+ASLGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]

BLAST of Lsi07G000510 vs. ExPASy Swiss-Prot
Match: Q9SU00 (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-59
Identity = 108/149 (72.48%), Postives = 131/149 (87.92%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MD  EL RVFQMFD+NGDG+I K EL D  +++GI +P+ ++ +MI K+DVNGDG +DID
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ +++E++EEEDMREAF VFDQNGDGFIT +ELRSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+GGGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]

BLAST of Lsi07G000510 vs. ExPASy Swiss-Prot
Match: Q9LX27 (Calmodulin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=CML4 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.2e-57
Identity = 109/145 (75.17%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 3   PTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDIDEF 62
           P +L+RVFQMFD+NGDGRITK+EL+DSLENLGIF+PDKDL QMI+K+D NGDGCVDI+EF
Sbjct: 49  PVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEF 108

Query: 63  GELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKMIM 122
             LY SI++E+ EE DMR+AFNVFDQ+GDGFITV+EL SV+ SLGLKQG+T+E CK+MIM
Sbjct: 109 ESLYGSIVEEK-EEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIM 168

Query: 123 KVDVDGDGMVNYKEFKQMMKGGGFS 148
           +VD DGDG VNYKEF QMMK G FS
Sbjct: 169 QVDEDGDGRVNYKEFLQMMKSGDFS 192

[Close]

BLAST of Lsi07G000510 vs. ExPASy TrEMBL
Match: D1MWZ5 (Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitCaEFh PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. ExPASy TrEMBL
Match: A0A1S3BXJ7 (calmodulin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103494537 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. ExPASy TrEMBL
Match: A0A6J1IXV3 (calmodulin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111479505 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.5e-77
Identity = 147/150 (98.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTEL+RVFQMFDRNGDGRIT+KELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDE+DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. ExPASy TrEMBL
Match: A0A6J1CVD5 (calmodulin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111014628 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.0e-76
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVN DGCVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNCDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. ExPASy TrEMBL
Match: A0A6J1GTL3 (calmodulin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111457424 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTEL+RVFQMFDRNGDGRIT+KELSDSLENLGIFIPDKDL QMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLIQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDE+DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 ITKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. NCBI nr
Match: XP_004152098.1 (calmodulin-like protein 3 [Cucumis sativus] >XP_008453977.1 PREDICTED: calmodulin-like protein 3 [Cucumis melo] >XP_038878708.1 calmodulin-like protein 3 [Benincasa hispida] >KAE8649113.1 hypothetical protein Csa_015095 [Cucumis sativus] >BAI52955.1 calcium-binding EF-hand protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 300.8 bits (769), Expect = 6.5e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. NCBI nr
Match: XP_022979973.1 (calmodulin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 297.0 bits (759), Expect = 9.3e-77
Identity = 147/150 (98.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTEL+RVFQMFDRNGDGRIT+KELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDE+DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. NCBI nr
Match: XP_022145111.1 (calmodulin-like protein 3 [Momordica charantia])

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVN DGCVDID
Sbjct: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNCDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITV+ELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVEELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. NCBI nr
Match: XP_023526445.1 (calmodulin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.0 bits (754), Expect = 3.5e-76
Identity = 146/150 (97.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTEL+RVFQMFDRNGDGRIT+KELSDSLENLGIFIPDKDLT MIEKIDVNGDGCVDID
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLTHMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDE+DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           IMKVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. NCBI nr
Match: XP_022955376.1 (calmodulin-like protein 3 [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 2.3e-75
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTEL+RVFQMFDRNGDGRIT+KELSDSLENLGIFIPDKDL QMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELKRVFQMFDRNGDGRITQKELSDSLENLGIFIPDKDLIQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFGELYQSIMDE+DEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM
Sbjct: 61  EFGELYQSIMDEKDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVNYKEFKQMMKGGGFSALG
Sbjct: 121 ITKVDVDGDGMVNYKEFKQMMKGGGFSALG 150

[Close]

BLAST of Lsi07G000510 vs. TAIR 10
Match: AT3G07490.1 (ARF-GAP domain 11 )

HSP 1 Score: 261.9 bits (668), Expect = 3.1e-70
Identity = 128/150 (85.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MD  EL R+FQMFDRNGDG+ITK+EL+DSLENLGI+IPDKDL QMIEKID+NGDG VDI+
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ+IM+ERDEEEDMREAFNVFDQN DGFITV+ELRSVLASLGLKQGRT+EDCK+M
Sbjct: 61  EFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSALG 151
           I KVDVDGDGMVN+KEFKQMMKGGGF+ALG
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMKGGGFAALG 150

[Close]

BLAST of Lsi07G000510 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 256.9 bits (655), Expect = 1.0e-68
Identity = 124/150 (82.67%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MDPTEL+RVFQMFD+NGDG IT KELS++L +LGI+IPDK+LTQMIEKIDVNGDGCVDID
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 61  EFGELYQSIMDERD-EEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKK 120
           EFGELY++IMDE D EEEDM+EAFNVFDQNGDGFITVDEL++VL+SLGLKQG+T++DCKK
Sbjct: 61  EFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKK 120

Query: 121 MIMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           MI KVDVDGDG VNYKEF+QMMKGGGF++L
Sbjct: 121 MIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150

[Close]

BLAST of Lsi07G000510 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 242.3 bits (617), Expect = 2.5e-64
Identity = 118/153 (77.12%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           +DP+EL+RVFQMFD+NGDGRITK+EL+DSLENLGI+IPDKDLTQMI KID NGDGCVDID
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 61  EFGELYQSIMDE-----RDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVE 120
           EF  LY SI+DE       EEEDM++AFNVFDQ+GDGFITV+EL+SV+ASLGLKQG+T++
Sbjct: 121 EFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLD 180

Query: 121 DCKKMIMKVDVDGDGMVNYKEFKQMMKGGGFSA 149
            CKKMIM+VD DGDG VNYKEF QMMKGGGFS+
Sbjct: 181 GCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]

BLAST of Lsi07G000510 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 229.6 bits (584), Expect = 1.7e-60
Identity = 108/149 (72.48%), Postives = 131/149 (87.92%), Query Frame = 0


Query: 1   MDPTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDID 60
           MD  EL RVFQMFD+NGDG+I K EL D  +++GI +P+ ++ +MI K+DVNGDG +DID
Sbjct: 1   MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDID 60

Query: 61  EFGELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKM 120
           EFG LYQ +++E++EEEDMREAF VFDQNGDGFIT +ELRSVLAS+GLKQGRT+EDCKKM
Sbjct: 61  EFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKM 120

Query: 121 IMKVDVDGDGMVNYKEFKQMMKGGGFSAL 150
           I KVDVDGDGMVN+KEFKQMM+GGGF+AL
Sbjct: 121 ISKVDVDGDGMVNFKEFKQMMRGGGFAAL 149

[Close]

BLAST of Lsi07G000510 vs. TAIR 10
Match: AT3G59440.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-58
Identity = 109/145 (75.17%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 3   PTELRRVFQMFDRNGDGRITKKELSDSLENLGIFIPDKDLTQMIEKIDVNGDGCVDIDEF 62
           P +L+RVFQMFD+NGDGRITK+EL+DSLENLGIF+PDKDL QMI+K+D NGDGCVDI+EF
Sbjct: 49  PVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEF 108

Query: 63  GELYQSIMDERDEEEDMREAFNVFDQNGDGFITVDELRSVLASLGLKQGRTVEDCKKMIM 122
             LY SI++E+ EE DMR+AFNVFDQ+GDGFITV+EL SV+ SLGLKQG+T+E CK+MIM
Sbjct: 109 ESLYGSIVEEK-EEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIM 168

Query: 123 KVDVDGDGMVNYKEFKQMMKGGGFS 148
           +VD DGDG VNYKEF QMMK G FS
Sbjct: 169 QVDEDGDGRVNYKEFLQMMKSGDFS 192

The following BLAST results are available for this feature:

BLAST of Lsi07G000510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRR7	4.4e-69	85.33	Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1	[more]
Q9LNE7	1.4e-67	82.67	Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1	[more]
O22845	3.6e-63	77.12	Calmodulin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=CML5 PE=2 SV=2	[more]
Q9SU00	2.4e-59	72.48	Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1	[more]
Q9LX27	2.2e-57	75.17	Calmodulin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=CML4 PE=2 SV=1	[more]

BLAST of Lsi07G000510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D1MWZ5	3.1e-78	100.00	Calcium-binding EF-hand protein OS=Citrullus lanatus subsp. vulgaris OX=260674 G...	[more]
A0A1S3BXJ7	3.1e-78	100.00	calmodulin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103494537 PE=4 SV=1	[more]
A0A6J1IXV3	4.5e-77	98.00	calmodulin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111479505 PE=4 SV=1	[more]
A0A6J1CVD5	1.0e-76	98.67	calmodulin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111014628 PE=4 SV...	[more]
A0A6J1GTL3	1.1e-75	96.67	calmodulin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111457424 PE=4 SV=...	[more]

BLAST of Lsi07G000510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152098.1	6.5e-78	100.00	calmodulin-like protein 3 [Cucumis sativus] >XP_008453977.1 PREDICTED: calmoduli...	[more]
XP_022979973.1	9.3e-77	98.00	calmodulin-like protein 3 [Cucurbita maxima]	[more]
XP_022145111.1	2.1e-76	98.67	calmodulin-like protein 3 [Momordica charantia]	[more]
XP_023526445.1	3.5e-76	97.33	calmodulin-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022955376.1	2.3e-75	96.67	calmodulin-like protein 3 [Cucurbita moschata]	[more]

BLAST of Lsi07G000510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07490.1	3.1e-70	85.33	ARF-GAP domain 11	[more]
AT1G05990.1	1.0e-68	82.67	EF hand calcium-binding protein family	[more]
AT2G43290.1	2.5e-64	77.12	Calcium-binding EF-hand family protein	[more]
AT4G12860.1	1.7e-60	72.48	EF hand calcium-binding protein family	[more]
AT3G59440.1	1.6e-58	75.17	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01697	PARVALBUMIN	coord: 65..83 score: 13.16 coord: 87..103 score: 46.03 coord: 124..137 score: 49.64
None	No IPR available	GENE3D	1.10.238.10		coord: 2..68 e-value: 2.4E-19 score: 71.2
None	No IPR available	GENE3D	1.10.238.10		coord: 69..144 e-value: 1.3E-24 score: 88.3
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 1..149
None	No IPR available	PANTHER	PTHR10891:SF901	EF HAND CALCIUM-BINDING FAMILY PROTEIN	coord: 1..149
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 41..69 e-value: 6.6E-4 score: 29.0 coord: 116..144 e-value: 4.5E-5 score: 32.9 coord: 78..106 e-value: 7.0E-7 score: 38.9 coord: 5..33 e-value: 5.8E-5 score: 32.5
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 5..67 e-value: 2.5E-13 score: 50.2 coord: 76..142 e-value: 1.7E-13 score: 50.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 1..36 score: 14.597092
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 112..147 score: 15.071314
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 37..72 score: 13.007053
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 74..109 score: 17.247154
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 5..62 e-value: 3.99295E-15 score: 63.7209
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 82..142 e-value: 3.45635E-16 score: 66.4173
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 50..62
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 14..26
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 87..99
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 125..137
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 5..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G000510.1	Lsi07G000510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding