Lsi07G000500 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTAATTGGATTTACGGAAGTGGTAGTGGGTGGACTTCCAATTTGGGAAAGTCGTCGTGTTACGTTTTCTTTTCTCAGCTGAGCGTAGTTTAGATTATTCATCTGCTTGTCTATTCGATTCAGGACCTGAATTCACACTTCAGGTCTTTAACTTAGTGTAAATTTGTTCATATTCATGTGTTGTTTGATGAGATTAGAAGTGAAGTTGGTTTTACTTGTAGTAATTTACCTAAAATTTGGATCTTTTTGACATGTTGAATGTAAGTAGGAACTAATTTTTCACCATTGCATAAGTTGAAGAAAAGTAGAGGAGCTGTTTTGGCTTTATTACAGTGCTCCAGAAAATTCCAAGAGTTGTGTTCTTTCAAGGTTTTTCATTGTCTCCTTATCCCTTCCAAACCGACTTGGAAGCCAAGGCAATATGTCTCGATTCTAGATTCACTATCCTTAATCTCCCCTGCCCTATTGAAATTTCAGTGCAACTCACAAGATGACCTTCCTCTTCACACCCTTCCTCAACTGACTTGAAGATTCTCATGCTTTTTTCAAACTCCTTGATTACTTCACTTGGCATTTTGAAAGAGGGCGTAGAGGAGCTGGCCACACTAGCAAGGCAAGATTATTTACATCCTTTGGGAAAATTTTTCTTCAATCCATTTCTCTAATCTGTTCTTGATTCTTTCCACTATTTAACCTCAAGAAGTGAAACTTGAAGGGTTGAAGGGGTATATTATTCATGTAGGATATAGACCCTCTCTCAGACTACACCCCCAAAATGATCATCCTGGAGAACCTCCGGTTGATCAATATTGACGCACACAATTATAGACTATCTTGTTGATGTTCTCATACAGGCGACCTTTTACAGAATTTCGAGGATTTTTAAGGCATTTTCTAGTACTTTTTTTTTTTCCTTTAATAATAATAAAAATAAGAAAATAAATAAAAAACATAATATCATCAGTCACTAGTGATGGTTGTCCTGAATTGAATTCTCCCCTATCTCTGTCATTACAATGCTTTGAGAGCTCTTTCTGAAACAACCTTCTTAGAAAATCAGCAATAATCACAACGAGGAATCGAACAGGAAAAGAAAATCTCCATGTCTAAGATATTCTTTTACTTCAATTTTACCTCTTGTTTTACCGTCATGAAAACCGAGGATCTAGCTTTTGCTATGCACTATGGCAAGGAATTTACAAACATTGATCATCAAACTAATTTGGTGGAAGCCTATCCTGCTAGCTGTTACTTTCGTAGGAAGACATGTAAAGTTCCCTTCCAGGGAAGCATTCTGCATCTCTAAAGAAATTCTAAAATTTGACAATTTAGAATAAAGAAGAAATCTCATAATGTTGAGGGGTAACTTAATTATTAATCGTTACTTGAGAGGAAACTTAATTATCAATTGTTACTTGTAATTTTCTGTAAAGAGGACATCCAGTGGTCCAAAAGAAAACGTCCGTGTGCATGAAATAATTTTTTTTGCTATGCAAAACTTAACTGCTTTATATAAAGGATCAATACTGCGGTAGTTTTAAAATTTTGGTGGCTTGGCTCAATTGATGAAATCAAAAGTTATGTATAACAATGCCAATACATAGAGTGTGAAAATTATGATTTGTGGTTTACTTTTTAGTATTTTATAAATATATTATTGATCCAGTACCTATAAATCAGAATGTATCTTTCAAGTTTTAAATAATTATTTTTACCTCAAGTTCCTTTGTGATTCATCTACCTCTAGAGCTTTGCTTGCTAATGGCACAATATAGCAGGAATCAATTTAACTGCACGACAGACATTACTATCATGTGATTTCATTGACCCTTGTACTCCTTTAACTCGTTGCACCGTCTGGAGCAAAGCCAGCTGCTGAAGATTCAATTCTTCTTTGGTGTGTTGGTCTTTCCTCCGTGTAATCTGTCCTTTTGCATGTTCTGTATCCTGATAATTCATATTGCTGTCAAATAAAGAAATGGATGAAGATCTTTTTCTTGTTCAAAGTCTTCCTCTTCAGGGAGTCAATTGAAAAACAGAATGGGTTGTCAAATCATCTTAGCGATTTGTAAATTGTTTGTTAATGAATTATTTCCTGCTTTTGTGAAGAAGTATTTAAACATTTAACATTTACTTTGCAATGTAATATTTGAAAAAAAAATGTCCTTTCTTAATAATATCTGTACGCAGAGTGGCTTTGGCAGTTAAAACACACATTATGGGAAATCCTTAACATAAGCTTTGATATGACTAATACAGTGCTAGTAAAAAACAAAGTGTCCCAAAGAATAAGCCCTGATTAGAATTATTGGTTTCAGGTGATATGACTGGAAACATACCTGAGATCCAAAGTAGACGTGTAGAGCATACATGTCCAGCTGAAAATGTAAATGCTTCTGCTGGTTCTCCTAAAACTTCTCCAGAAGTCTTCCCATCTGCTATTGAATTCTATGTCTGGTCTGATGAGGGAATTAATCTTTACGTGGATTTAAATTCTAGCCCTTTGGACTGGACCGAAAGATTAAAAAACGAGGTTTACATCTGTGAGAGCATCTACAGAGACAAATGTCTGCAACAAAACCTCTGTTGGTTTAAAGGTCATAAAGAATTTGCGAAATCTTTTCAGTGGAATAATCATGCTGGCCTAATCAAGGGTGACTATTTACAGGAGGAAACTCCCTCCTGTTCAGACCTGATGACAAGTAATTGCATGGAGACTGACCGACTAGATGAAGCTGATGGATCTGTTATCTTCTCTGCTATTACCTCTAATGCCATTAATGCAGATGCTTCTGAGAATTTAGATCAAGATCAGACACTCATATCTTCTGAAACTAATTTTGATATGCAGAACCAGAAACTTGCTGGGTCTGAATCTTGTACTGAAGAGGATAACCGTGCAACGAATCTTGATTTTGAGATTGATAATGCTTTACAGAAAAAGGAAAATTCTTTTCCAATTTCTGGTGGTCAATCTAATCTTTCCACATTAGTCCATCAAAATTTTACGCTTGAAAGTGAAATTTGTGAATCTTCAACACTGCAGAACAGCTGCAGTATTTTAAACCTCCCTGTGGAGAATCCTGGAAGCTCAGCAGCTGGTTCTATGGACATGGAATCATCAGATATTGAACAATGTCCTAAAGACGTCTCTTGTTCACCTTGTAGAGCATTACCACAGAGAGACTCGAATGTTTCTGATTACAGCTTGCAAACAAGTGCAGAGAAGTCGGTAAGGTGTTGTTTCGTTGCCAATTTCCATGTGTTCTGCAATTAAGAGTATATCATGGTTTCTATATACACAGTTTTTTAAAAGTATTTCTTTTATGATTATAAGTCCAAAAAAAAAAAAAAGGTTGTGTACGATTATAGATATGGATGAAGCATTGGAGTTGGTTTGCTTTTAGCTTCAATTTTAAATTATTATTTCCTTGATAGCCAGTTGTGGAGACATTTTAAGATCTCCTTTGACCTTTTGATTTGGGATGATGTCTTATTTAATATTTCCTATCTTCCTTTTTATACATAGTTCTTGTTTGATGGATACTTCACGTATGTGGATATGGATATAAGAACATTTTTTAAATGGAAATCTTCTTCTGCCACCAGAAAGTACACCTATTTTTCTCGCATTAATCAACCTTTTAATTGTAATATGGTTTTTTTGCTTGCAGGAGAGGAACAACTTAAGTGTTGCAACGGAGAGTTCAGAGTAAACATTTTTCTAATGAGAAGCCTTTTAACTATTTTAACTTGTTGTTTGATACCATCATTCACTATATTTTTTTTATTTTTTATTTCCAGATGCTCTCAATTCCCTGAATCTGGGGAGAAGACGTTGCCTGTATCTCATATTCTTGAATCTAATGGAGCCCATAAGAGGAGGAAACTCACTAAAACTGAAACAAGATGTTATAGTGAACCAGATAGAAGAGTTTTAAGAAGTGTAACGAATAAACAGAGGCTCCCTAGAAGATCCAGGCGGCTCACTTTAAAGGTCTAG ATGGGTGATATGACTGGAAACATACCTGAGATCCAAAGTAGACGTGTAGAGCATACATGTCCAGCTGAAAATGTAAATGCTTCTGCTGGTTCTCCTAAAACTTCTCCAGAAGTCTTCCCATCTGCTATTGAATTCTATGTCTGGTCTGATGAGGGAATTAATCTTTACGTGGATTTAAATTCTAGCCCTTTGGACTGGACCGAAAGATTAAAAAACGAGGTTTACATCTGTGAGAGCATCTACAGAGACAAATGTCTGCAACAAAACCTCTGTTGGTTTAAAGGTCATAAAGAATTTGCGAAATCTTTTCAGTGGAATAATCATGCTGGCCTAATCAAGGGTGACTATTTACAGGAGGAAACTCCCTCCTGTTCAGACCTGATGACAAGTAATTGCATGGAGACTGACCGACTAGATGAAGCTGATGGATCTGTTATCTTCTCTGCTATTACCTCTAATGCCATTAATGCAGATGCTTCTGAGAATTTAGATCAAGATCAGACACTCATATCTTCTGAAACTAATTTTGATATGCAGAACCAGAAACTTGCTGGGTCTGAATCTTGTACTGAAGAGGATAACCGTGCAACGAATCTTGATTTTGAGATTGATAATGCTTTACAGAAAAAGGAAAATTCTTTTCCAATTTCTGGTGGTCAATCTAATCTTTCCACATTAGTCCATCAAAATTTTACGCTTGAAAGTGAAATTTGTGAATCTTCAACACTGCAGAACAGCTGCAGTATTTTAAACCTCCCTGTGGAGAATCCTGGAAGCTCAGCAGCTGGTTCTATGGACATGGAATCATCAGATATTGAACAATGTCCTAAAGACGTCTCTTGTTCACCTTGTAGAGCATTACCACAGAGAGACTCGAATGTTTCTGATTACAGCTTGCAAACAAGTGCAGAGAAGTCGTTCTTGTTTGATGGATACTTCACGTATGTGGATATGGATATAAGAACATTTTTTAAATGGAAATCTTCTTCTGCCACCAGAAAGTACACCTATTTTTCTCGCATTAATCAACCTTTTAATTGTAATATGGAGAGGAACAACTTAAGTGTTGCAACGGAGAGTTCAGAATGCTCTCAATTCCCTGAATCTGGGGAGAAGACGTTGCCTGTATCTCATATTCTTGAATCTAATGGAGCCCATAAGAGGAGGAAACTCACTAAAACTGAAACAAGATGTTATAGTGAACCAGATAGAAGAGTTTTAAGAAGTGTAACGAATAAACAGAGGCTCCCTAGAAGATCCAGGCGGCTCACTTTAAAGGTCTAG ATGGGTGATATGACTGGAAACATACCTGAGATCCAAAGTAGACGTGTAGAGCATACATGTCCAGCTGAAAATGTAAATGCTTCTGCTGGTTCTCCTAAAACTTCTCCAGAAGTCTTCCCATCTGCTATTGAATTCTATGTCTGGTCTGATGAGGGAATTAATCTTTACGTGGATTTAAATTCTAGCCCTTTGGACTGGACCGAAAGATTAAAAAACGAGGTTTACATCTGTGAGAGCATCTACAGAGACAAATGTCTGCAACAAAACCTCTGTTGGTTTAAAGGTCATAAAGAATTTGCGAAATCTTTTCAGTGGAATAATCATGCTGGCCTAATCAAGGGTGACTATTTACAGGAGGAAACTCCCTCCTGTTCAGACCTGATGACAAGTAATTGCATGGAGACTGACCGACTAGATGAAGCTGATGGATCTGTTATCTTCTCTGCTATTACCTCTAATGCCATTAATGCAGATGCTTCTGAGAATTTAGATCAAGATCAGACACTCATATCTTCTGAAACTAATTTTGATATGCAGAACCAGAAACTTGCTGGGTCTGAATCTTGTACTGAAGAGGATAACCGTGCAACGAATCTTGATTTTGAGATTGATAATGCTTTACAGAAAAAGGAAAATTCTTTTCCAATTTCTGGTGGTCAATCTAATCTTTCCACATTAGTCCATCAAAATTTTACGCTTGAAAGTGAAATTTGTGAATCTTCAACACTGCAGAACAGCTGCAGTATTTTAAACCTCCCTGTGGAGAATCCTGGAAGCTCAGCAGCTGGTTCTATGGACATGGAATCATCAGATATTGAACAATGTCCTAAAGACGTCTCTTGTTCACCTTGTAGAGCATTACCACAGAGAGACTCGAATGTTTCTGATTACAGCTTGCAAACAAGTGCAGAGAAGTCGTTCTTGTTTGATGGATACTTCACGTATGTGGATATGGATATAAGAACATTTTTTAAATGGAAATCTTCTTCTGCCACCAGAAAGTACACCTATTTTTCTCGCATTAATCAACCTTTTAATTGTAATATGGAGAGGAACAACTTAAGTGTTGCAACGGAGAGTTCAGAATGCTCTCAATTCCCTGAATCTGGGGAGAAGACGTTGCCTGTATCTCATATTCTTGAATCTAATGGAGCCCATAAGAGGAGGAAACTCACTAAAACTGAAACAAGATGTTATAGTGAACCAGATAGAAGAGTTTTAAGAAGTGTAACGAATAAACAGAGGCTCCCTAGAAGATCCAGGCGGCTCACTTTAAAGGTCTAG MGDMTGNIPEIQSRRVEHTCPAENVNASAGSPKTSPEVFPSAIEFYVWSDEGINLYVDLNSSPLDWTERLKNEVYICESIYRDKCLQQNLCWFKGHKEFAKSFQWNNHAGLIKGDYLQEETPSCSDLMTSNCMETDRLDEADGSVIFSAITSNAINADASENLDQDQTLISSETNFDMQNQKLAGSESCTEEDNRATNLDFEIDNALQKKENSFPISGGQSNLSTLVHQNFTLESEICESSTLQNSCSILNLPVENPGSSAAGSMDMESSDIEQCPKDVSCSPCRALPQRDSNVSDYSLQTSAEKSFLFDGYFTYVDMDIRTFFKWKSSSATRKYTYFSRINQPFNCNMERNNLSVATESSECSQFPESGEKTLPVSHILESNGAHKRRKLTKTETRCYSEPDRRVLRSVTNKQRLPRRSRRLTLKV Homology
BLAST of Lsi07G000500 vs. ExPASy TrEMBL
Match: A0A0A0KXF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015770 PE=4 SV=1) HSP 1 Score: 639.0 bits (1647), Expect = 1.4e-179 Identity = 337/426 (79.11%), Postives = 354/426 (83.10%), Query Frame = 0
BLAST of Lsi07G000500 vs. ExPASy TrEMBL
Match: A0A5D3D2I7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001280 PE=4 SV=1) HSP 1 Score: 628.2 bits (1619), Expect = 2.4e-176 Identity = 331/424 (78.07%), Postives = 350/424 (82.55%), Query Frame = 0
BLAST of Lsi07G000500 vs. ExPASy TrEMBL
Match: A0A1S3BYC6 (uncharacterized protein LOC103494538 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494538 PE=4 SV=1) HSP 1 Score: 626.7 bits (1615), Expect = 7.1e-176 Identity = 330/423 (78.01%), Postives = 349/423 (82.51%), Query Frame = 0
BLAST of Lsi07G000500 vs. ExPASy TrEMBL
Match: A0A5A7TNZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003480 PE=4 SV=1) HSP 1 Score: 626.3 bits (1614), Expect = 9.2e-176 Identity = 330/424 (77.83%), Postives = 349/424 (82.31%), Query Frame = 0
BLAST of Lsi07G000500 vs. ExPASy TrEMBL
Match: A0A6J1GUR5 (uncharacterized protein LOC111457658 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457658 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 5.6e-149 Identity = 294/425 (69.18%), Postives = 323/425 (76.00%), Query Frame = 0
BLAST of Lsi07G000500 vs. NCBI nr
Match: XP_038905854.1 (uncharacterized protein LOC120091797 [Benincasa hispida] >XP_038905863.1 uncharacterized protein LOC120091797 [Benincasa hispida] >XP_038905870.1 uncharacterized protein LOC120091797 [Benincasa hispida]) HSP 1 Score: 659.8 bits (1701), Expect = 1.6e-185 Identity = 345/424 (81.37%), Postives = 359/424 (84.67%), Query Frame = 0
BLAST of Lsi07G000500 vs. NCBI nr
Match: XP_031740578.1 (uncharacterized protein LOC105435172 [Cucumis sativus]) HSP 1 Score: 634.0 bits (1634), Expect = 9.2e-178 Identity = 335/424 (79.01%), Postives = 352/424 (83.02%), Query Frame = 0
BLAST of Lsi07G000500 vs. NCBI nr
Match: KAE8649114.1 (hypothetical protein Csa_014495 [Cucumis sativus]) HSP 1 Score: 632.5 bits (1630), Expect = 2.7e-177 Identity = 334/423 (78.96%), Postives = 351/423 (82.98%), Query Frame = 0
BLAST of Lsi07G000500 vs. NCBI nr
Match: TYK16986.1 (uncharacterized protein E5676_scaffold130G001280 [Cucumis melo var. makuwa]) HSP 1 Score: 628.2 bits (1619), Expect = 5.0e-176 Identity = 331/424 (78.07%), Postives = 350/424 (82.55%), Query Frame = 0
BLAST of Lsi07G000500 vs. NCBI nr
Match: XP_008453978.1 (PREDICTED: uncharacterized protein LOC103494538 isoform X1 [Cucumis melo]) HSP 1 Score: 626.7 bits (1615), Expect = 1.5e-175 Identity = 330/423 (78.01%), Postives = 349/423 (82.51%), Query Frame = 0
BLAST of Lsi07G000500 vs. TAIR 10
Match: AT3G59430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; Has 332 Blast hits to 125 proteins in 52 species: Archae - 0; Bacteria - 61; Metazoa - 17; Fungi - 14; Plants - 37; Viruses - 2; Other Eukaryotes - 201 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 5.3e-06 Identity = 27/82 (32.93%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of Lsi07G000500 vs. TAIR 10
Match: AT3G59430.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 5.3e-06 Identity = 27/82 (32.93%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of Lsi07G000500 vs. TAIR 10
Match: AT3G59430.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 5.3e-06 Identity = 27/82 (32.93%), Postives = 44/82 (53.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
|