![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lsi06G016750 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACTTCCCTCAGATTCTGCATACCTCTCAACCAAGCTACCAAGATGAACCGCAACCAGAATCAGGCATTCTCCCTATATATCTATTGACTATTGTATTGTATGTACAAATTCCCTACCCTAAATCATATTTATATCATTAATTCTATGCTGCTGCTGTCACTGGTAGATTCTCAGAAGAAGCTCTGCTGGCCGGGGATTGCTCAACAATAATGGTTTCCATCTTCTTCGTGTCTCTTGTGCGGTAACTAACTTTACCATTTTCATTATTTGCTAACTAAATCTAAGTCTCTAACTTTGTGAATTGAGTTTGAAACTTATTTGGTAATCGCATTGAGTGTATGAACAGGCAAAACCAGAGACAGTTGATAAAGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAACTTCAGAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCCGACTCCCTCGACACAGTACGTCTTATCTCTTATCCTTCCTTCTTCACTCTTCTTTTACTTAAATTTAATGTATATGTTGGCATGCCCATAGGTGGAGATTATTATGACTTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAATGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAAAAGACTATATAGGCTTTTAGTATGTTGAAGTAGTATTATTCCAAGAGTTTTGTTGGGTTGGGTTGAGTAGGTAGTATGTTCTTTTTTCCTCAAATGATTTTTTTTAAGCAAATTAATGTGTGCTTCTACTGCAGCAACTTGTTAACTACAAAATTTATAATGCAATATGAAGTATGGTGTTGTGTTGTTTTTTGCTCTTTAAACGAGGAGGGGATCGATCAGTCTATTTCATGGATTGCAATGGTGGAGAGAAGACAACCTTTTGAAACCATCAAATTTCTTTCAAAAATAAAGTTGATGACCTTTTTCCCTTGGAAAGGAAAGAAAAAAGCCGATGGAAAGAGATGGTTTTTCAACACTACTTTTATACTAAGTATAATTTATGATTAAGTGGGACCCCCTACTGATAAAAATGTAGCCCATTTTAATGGAGGGTTTGCTTTTGAAGACCAAAGTAGTTGGCTCAGGTAACAAAGCACTATCACTTCAACACAAAGTGATTGTAGATATGAAAACCCAATTTCT TACTTCCCTCAGATTCTGCATACCTCTCAACCAAGCTACCAAGATGAACCGCAACCAGAATCAGGCATTCTCCCTATATATCTATTGACTATTGTATTGTATATTCTCAGAAGAAGCTCTGCTGGCCGGGGATTGCTCAACAATAATGGTTTCCATCTTCTTCGTGTCTCTTGTGCGGCAAAACCAGAGACAGTTGATAAAGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAACTTCAGAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACTTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAATGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAAAAGACTATATAGGCTTTTAGTATGTTGAAGTAGTATTATTCCAAGAGTTTTGTTGGGTTGGGTTGAGTAGGTAGTATGTTCTTTTTTCCTCAAATGATTTTTTTTAAGCAAATTAATGTGTGCTTCTACTGCAGCAACTTGTTAACTACAAAATTTATAATGCAATATGAAGTATGGTGTTGTGTTGTTTTTTGCTCTTTAAACGAGGAGGGGATCGATCAGTCTATTTCATGGATTGCAATGGTGGAGAGAAGACAACCTTTTGAAACCATCAAATTTCTTTCAAAAATAAAGTTGATGACCTTTTTCCCTTGGAAAGGAAAGAAAAAAGCCGATGGAAAGAGATGGTTTTTCAACACTACTTTTATACTAAGTATAATTTATGATTAAGTGGGACCCCCTACTGATAAAAATGTAGCCCATTTTAATGGAGGGTTTGCTTTTGAAGACCAAAGTAGTTGGCTCAGGTAACAAAGCACTATCACTTCAACACAAAGTGATTGTAGATATGAAAACCCAATTTCT TACTTCCCTCAGATTCTGCATACCTCTCAACCAAGCTACCAAGATGAACCGCAACCAGAATCAGGCATTCTCCCTATATATCTATTGACTATTGTATTGTATATTCTCAGAAGAAGCTCTGCTGGCCGGGGATTGCTCAACAATAATGGTTTCCATCTTCTTCGTGTCTCTTGTGCGGCAAAACCAGAGACAGTTGATAAAGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAACTTCAGAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACTTTAGAGGAAGAATTTAGCATCAATATCGAAGAGGATAATGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAA YFPQILHTSQPSYQDEPQPESGILPIYLLTIVLYILRRSSAGRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS Homology
BLAST of Lsi06G016750 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26 Identity = 62/85 (72.94%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.6e-26 Identity = 67/113 (59.29%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.6e-26 Identity = 61/98 (62.24%), Postives = 80/98 (81.63%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy Swiss-Prot
Match: Q9SW21 (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ACP4 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.7e-25 Identity = 65/116 (56.03%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 6.2e-25 Identity = 61/86 (70.93%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy TrEMBL
Match: A0A5D3BIB6 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00190 PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.8e-43 Identity = 103/111 (92.79%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy TrEMBL
Match: E5GBM2 (Acyl carrier protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 4.0e-43 Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy TrEMBL
Match: A0A1S3CLC5 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103502288 PE=3 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 4.0e-43 Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy TrEMBL
Match: A0A6J1JI20 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111484784 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.0e-42 Identity = 102/118 (86.44%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Lsi06G016750 vs. ExPASy TrEMBL
Match: A0A0A0LNR6 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_1G000670 PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.4e-42 Identity = 97/108 (89.81%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Lsi06G016750 vs. NCBI nr
Match: XP_038879812.1 (acyl carrier protein 4, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 188.7 bits (478), Expect = 3.4e-44 Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0
BLAST of Lsi06G016750 vs. NCBI nr
Match: KAA0057735.1 (acyl carrier protein 4 [Cucumis melo var. makuwa] >TYJ98421.1 acyl carrier protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 185.3 bits (469), Expect = 3.7e-43 Identity = 103/111 (92.79%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of Lsi06G016750 vs. NCBI nr
Match: XP_008464386.1 (PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo] >ADN33862.1 acyl carrier protein [Cucumis melo subsp. melo]) HSP 1 Score: 184.1 bits (466), Expect = 8.3e-43 Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of Lsi06G016750 vs. NCBI nr
Match: XP_022987144.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 181.8 bits (460), Expect = 4.1e-42 Identity = 102/118 (86.44%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Lsi06G016750 vs. NCBI nr
Match: XP_023516582.1 (acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181.8 bits (460), Expect = 4.1e-42 Identity = 102/118 (86.44%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Lsi06G016750 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 ) HSP 1 Score: 115.9 bits (289), Expect = 2.6e-26 Identity = 65/116 (56.03%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of Lsi06G016750 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 ) HSP 1 Score: 112.5 bits (280), Expect = 2.9e-25 Identity = 58/87 (66.67%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of Lsi06G016750 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 ) HSP 1 Score: 110.9 bits (276), Expect = 8.4e-25 Identity = 57/87 (65.52%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of Lsi06G016750 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 ) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23 Identity = 65/128 (50.78%), Postives = 87/128 (67.97%), Query Frame = 0
BLAST of Lsi06G016750 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 ) HSP 1 Score: 98.6 bits (244), Expect = 4.3e-21 Identity = 51/84 (60.71%), Postives = 68/84 (80.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|