Lsi06G016590 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G016590
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr06: 26876567 .. 26879356 (+)
RNA-Seq ExpressionLsi06G016590
SyntenyLsi06G016590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAAACAAGCCTCCCAAGTATTTTAATGGAGGTTTGTCACTATGGCATACCATATAAACAATTTAAGGCCGGCTGACCAGTTTAAGATGTGATCATTTCAAAGTAACATAAAAGTAGAAACAAGTTTCAAATAGAAAAGGAAGATACATATCAAACGATGACGCCCATCACATATATATATTTTTAATAGATAATTTCCCATCTTCATTCCATTATAAGGACGTTGACCAAGCTTTAATTAGGATACTGGCAATTAAGTATTTCACGATTCTCTTTCTAAAAAAATGTATGCAATTAACTCCACCTCTAAGTGCCAGAGAAATTTCCCCCTTCACAAATAAAGGTTTTCGTAGGATAACTTGACCTTTATTAAAAAGAAAAAGATGACTTAATCAACTTGAATGATTATTATTACTATTGTTATTGTTTTTGAAATAAGAAAGTAAACATATATATATATTTTTTTTTTGTTGGAGAAAGTATGGGGGTAGAAATATTTTTGCAACTTTCCAAAATTACCCTCATCACCTTAGTACTTGGGCAGTCTCCCTAGGAATATTTTAGTCTTTTGAATGCCTCTCGTAATCTATAAATAGCCCTCTTCTTCTAGTTGCAAACCCTCTAATAAGAGAAGACTAAGCTTTTCCTGTACCAAAAGAGAAAGGCACATGCGAAAAACACAATAAAGCATGACCTTAGTAACCAAAGAATTTTAAAAATCATAAGAAAAACTTCACAATCATATAAAAGAGAAACATGTCCCCCACATCAATATTCCTAAACACATCATTACCAAATTACCAGAAAGCATTTATACACAAGAATATGGCTGATAGCAACCGTGTTTTGGAAGATGATTTACCAAACGAATCATATGACTAGTGTTGTGTTTCAAAGTATGGAACAGGAACAGACGATCTTCTGTTGCGAATTGTCAGTCTTTTTCTCTGTATCATCATCAACATATCTATGTAAATAAATATTTCATAGCACGACAAAGAAATACCAGACTCATCAAAAACAAATTTGATCAATGACCACAAGTTCTCACAGTTATGATTTAATCTAGTTTTATAAGGACCTCGACCATATTCAAGATTTCACTAGAGAACCACAGCAGTCACATAAAATTGTATTAAAACAAGTGACACTATCACATTCTATTTTTCATTCTCTTTCTCTTCTACTCTTCTATGTTTAAGGGTGCACGCTCTAGTGTGGATATTGGTTTATATATGCATTCATTGGAATCAAGAAAGAAAAATCATCAATCAAACAGAAGAAACCAAATTCCTAGATGAGATCCTAGACTGCTGCTAATACTAGAAAAACATTGAAGGGGCTGCCTTAGTTTAAAATTTGGTTGTGTGCCCCTTTATTTTGGAATTAAAAGCATGTTTATTTTGCACAAAGACTTGGTCAAGTTTCATGGATAATCGTTAATAAATTAATCAAAATTAAATCCAAACAATTAATGAAAAGTATAGACTTATAGTCAAGTTTCATGGAAATAAAAGATGTCACGAGTAATCTTATGAAATCGTGAAATATTAGAACTAATCAAAACTAATTCTAAGCAATTACCGACAATTATAATCAGTCAATTACATGAGGCTAATTAATATGTTAATTATGTATCAAGTAACTAATAACAATATCACTTACTTTAATAGTAGTTCACACTAGTTAACTAATTTCTGTAAACTCAACCAAATGAAACTACTAAATAAATCTGGAAGATTTGAGATTTTTATCAGCCCTAACAACAATCCAAGTTCTTTCTTCTCTAGTTTATTTTAGATTTCCCAATGATAGAAGATAAAAAGAAAAAAAATGATGAGGAAAATAATGAAGAGGGAAGAAGAAGCAAGAGTAAAGAAAAGGGAAAAATCACGCGAAGAGAAAGAGTGGTTAAGAATATATACTTGAATCCCCAGTTAAGGGTTATGCAAGAGTATCTGAGCTCTAGGGAGTTAGTACTTTAGGTCTGTTTTCATATTTAGGCAAGGTATCCAACAAATCCCTTTGTTCCTACGCAAAAATTCCCCAACCGAAGAATAGGAAGAAGAGTATTGTTCACAAATATAAAGCAAACTTTAATCTTCATCCAACATCTGTACTATATCGTAATTTTGCTATTAGATTTCCTAGGTGACTAGTTAAATCTGCAGGTCTGACAAGATTTTTTAAATCATCACAGAGAGCAGAATAATAGACCAGCTAAGCCCCTAGAAAATATCTCTCTCCATTTTTCTTTATATATATCTGTGCATGTCCGGCCATCTTGTGCATATCTCGACCATTCTCACTGCACAACTATCTGAACTACTACGTTTGATTGTCAAGGTAACTCGTATTCTCATAGGATATTACATCCTAGATAGGTGGCCATAGCTTGAATCCATTCTCTTATTATTTACACAGGCCAACTCAATGGATAACTTCTCACTGCATACTTTTTAAGGGAGTAATAGTCAATAAGATGATCATACATCTCTAACTTTGTGCCAAATGAAATGCTTTAGATGTAATCTGCTAGCAGTTATGTCCTAACCATTCAAAGAAGGCGCTAGAAAACCCTTCTGCATTTTAAAGCCACAGGCAATAGTTCAGGACGGGACAGAGAAAAAAACGGGATATAATTCTGGAGCAGAAATAAATGAAGAAAGAAGGTTCTCTAAAAGGCTCATGATAGCTAACTCATGGGACTACATGCTAAGATTCGGCATTCTGGTTAGCATAGTTCAGAGTTATAACCCAAAAGCACTAGTCAAAAGGCATTGA

mRNA sequence

ATGGATTTCCCAATGATAGAAGATAAAAAGAAAAAAAATGATGAGGAAAATAATGAAGAGGGAAGAAGAAGCAAGAGTAAAGAAAAGGGAAAAATCACGCGAAGAGAAAGAGTGGTTAAGAATATATACTTGAATCCCCAGTTAAGGGTTATGCAAGAGTATCTGAGCTCTAGGGAGTTAGCAATAGTTCAGGACGGGACAGAGAAAAAAACGGGATATAATTCTGGAGCAGAAATAAATGAAGAAAGAAGGTTCTCTAAAAGGCTCATGATAGCTAACTCATGGGACTACATGCTAAGATTCGGCATTCTGGTTAGCATAGTTCAGAGTTATAACCCAAAAGCACTAGTCAAAAGGCATTGA

Coding sequence (CDS)

ATGGATTTCCCAATGATAGAAGATAAAAAGAAAAAAAATGATGAGGAAAATAATGAAGAGGGAAGAAGAAGCAAGAGTAAAGAAAAGGGAAAAATCACGCGAAGAGAAAGAGTGGTTAAGAATATATACTTGAATCCCCAGTTAAGGGTTATGCAAGAGTATCTGAGCTCTAGGGAGTTAGCAATAGTTCAGGACGGGACAGAGAAAAAAACGGGATATAATTCTGGAGCAGAAATAAATGAAGAAAGAAGGTTCTCTAAAAGGCTCATGATAGCTAACTCATGGGACTACATGCTAAGATTCGGCATTCTGGTTAGCATAGTTCAGAGTTATAACCCAAAAGCACTAGTCAAAAGGCATTGA

Protein sequence

MDFPMIEDKKKKNDEENNEEGRRSKSKEKGKITRRERVVKNIYLNPQLRVMQEYLSSRELAIVQDGTEKKTGYNSGAEINEERRFSKRLMIANSWDYMLRFGILVSIVQSYNPKALVKRH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G016590.1Lsi06G016590.1mRNA