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Lsi06G016300 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATACCGCAAGAGGCATTCCTATAAAAAGCGCATCCGAGCAGCTGAGTAAAGCACGGAGCCGTGCGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCTCATAGCGGCATACGCCTATTTTTGGAGGGGTTTCTCTTTGGGGAAGCTCCTGCAGTTGAAGTACAAATGATTAATTAGCCCTTGAAATTGTACAATTGATAATTATTTGCTTAAGTTTTTTTCTCATATTTTTAGTAACATGTATATCAATACCTATGGTTATCGTGAATTATTTATGTTTCATTTTCAGATGATCGATTGGCTGTCATCTCTCAGTGCCCTATATTTTAGTGGGAAATCGTAAAAGCACACTTGGCCTTAAACTTGGAGCCTGCTGTAATATTTGGTTTTAACCATTTTATAATAGAAGGTGATTGCCACTGCCCTTGAAAGCAACATGTCGTAGGTAGATGTAAGGCTGGCTTAATTTAGATACCAGCAAAAATGTGCCATTGAAATTGTAAAAACATTTGTAATCTGTGTGAGAGTTAATGCTTGATTGGTATAAAAAAAATGAAACAGGGGTTGTGAGACTGAGCGAGCTAAGCAAAAAGGCAACAGCCAAGTGGGGGTAGAAGCTTGAAAGTATTATCTACTGAAAGAACTATGTGGGAGATGCTTTTTATAAGGATTTTGATTCGATGATCCTAAGTTTCTCAACACAGTTTTAATTTTCAAAGT TATACCGCAAGAGGCATTCCTATAAAAAGCGCATCCGAGCAGCTGAGTAAAGCACGGAGCCGTGCGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCTCATAGCGGCATACGCCTATTTTTGGAGGGGTTTCTCTTTGGGGAAGCTCCTGCAGTTGAAATGATCGATTGGCTGTCATCTCTCAGTGCCCTATATTTTAGTGGGAAATCGTAAAAGCACACTTGGCCTTAAACTTGGAGCCTGCTGTAATATTTGGTTTTAACCATTTTATAATAGAAGGTGATTGCCACTGCCCTTGAAAGCAACATGTCGTAGGTAGATGTAAGGCTGGCTTAATTTAGATACCAGCAAAAATGTGCCATTGAAATTGTAAAAACATTTGTAATCTGTGTGAGAGTTAATGCTTGATTGGTATAAAAAAAATGAAACAGGGGTTGTGAGACTGAGCGAGCTAAGCAAAAAGGCAACAGCCAAGTGGGGGTAGAAGCTTGAAAGTATTATCTACTGAAAGAACTATGTGGGAGATGCTTTTTATAAGGATTTTGATTCGATGATCCTAAGTTTCTCAACACAGTTTTAATTTTCAAAGT TATACCGCAAGAGGCATTCCTATAAAAAGCGCATCCGAGCAGCTGAGTAAAGCACGGAGCCGTGCGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGCTCATAGCGGCATACGCCTATTTTTGGAGGGGTTTCTCTTTGGGGAAGCTCCTGCAGTTGAAATGATCGATTGGCTGTCATCTCTCAGTGCCCTATATTTTAGTGGGAAATCGTAA YTARGIPIKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAPAVEMIDWLSSLSALYFSGKS Homology
BLAST of Lsi06G016300 vs. ExPASy TrEMBL
Match: A0A5A7URK2 (Monocarboxylate transporter 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00740 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.0e-17 Identity = 49/59 (83.05%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Lsi06G016300 vs. ExPASy TrEMBL
Match: A0A6A1VV19 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G010380 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.3e-10 Identity = 40/56 (71.43%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Lsi06G016300 vs. ExPASy TrEMBL
Match: A0A0D2UXN6 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G243800 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09 Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of Lsi06G016300 vs. ExPASy TrEMBL
Match: A0A7J9N3H8 (Uncharacterized protein (Fragment) OS=Gossypium schwendimanii OX=34291 GN=Goshw_005361 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.6e-09 Identity = 44/71 (61.97%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of Lsi06G016300 vs. ExPASy TrEMBL
Match: A0A1R3K6E7 (Monocarboxylate transporter 9 OS=Corchorus olitorius OX=93759 GN=COLO4_10930 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.2e-09 Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 0
BLAST of Lsi06G016300 vs. NCBI nr
Match: KAA0057788.1 (monocarboxylate transporter 9 [Cucumis melo var. makuwa] >TYJ98472.1 monocarboxylate transporter 9 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16 Identity = 49/59 (83.05%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Lsi06G016300 vs. NCBI nr
Match: KAB1214490.1 (hypothetical protein CJ030_MR5G010380 [Morella rubra]) HSP 1 Score: 73.6 bits (179), Expect = 8.8e-10 Identity = 40/56 (71.43%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Lsi06G016300 vs. NCBI nr
Match: KJB73689.1 (hypothetical protein B456_011G243800 [Gossypium raimondii]) HSP 1 Score: 71.6 bits (174), Expect = 3.4e-09 Identity = 39/48 (81.25%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of Lsi06G016300 vs. NCBI nr
Match: MBA0877873.1 (hypothetical protein [Gossypium schwendimanii]) HSP 1 Score: 70.5 bits (171), Expect = 7.5e-09 Identity = 44/71 (61.97%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of Lsi06G016300 vs. NCBI nr
Match: KAG8480455.1 (hypothetical protein CXB51_025076 [Gossypium anomalum]) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08 Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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