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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCCATAGTTGAATTGAAGGAATAGGGCAAGGAACTTACTTGTCCTGGATAATAAAACGGAAGCTCATACTGCAGAAAACAATATATAAAAAACAATCAAGATCCTATAGGTTTAAAATAAACTTCATCAAACTTTAGAACTATATAGGCAATTCACAAATCTCACCATGCCTTCTTTATAGTCCTTCCCTCTTTTCCTCCTACCAGGATGATAATCTTGGTCGTACTGCAAAAAAGTATCAGTTGGATGAGATAAGATGGATGGAACAGCCAGTCACAAAATGCTCGAAAATATCTATTAGCATCTTTAATTTTTCGACATCACTCTACAATCACCTCCTAAAAACAGAATTGGGGGGGGGGGGGGGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAGGGGGGGGGGGGGGGGGGTGACAAACCTTGTAGGACTCCTCCTCCAATCTATCTTTATTCGCAGCAACCCACTCCTTGTACTGTTTCAAAAACACTTTGTATCTGTCCAAACACAAATCTTCAGTATCCGTCCTCACATCTTTCTCAAGTCGATCCAAATCCACCCTCACAGCTTGCAATTTGTGCGCTCCCCTAATAAATTCCAGCTCTTCTCTATCAACATCCCAATCCCTCGGAGGCCAGTCCCGTGGAGGAACCACTTGAAGGACCAGCGGCCTAGTCCACGTCGTCTCAAGAGGCTCCGGTATCTCGCCTTTAATTTCGCATTGCGTGCGGTAATAGTCATCCTCCGTCAACCCCATTTCCTCCATCTTCTGCTTCCGGTACTTTGGGCTCAACATTTTGAAGGCTTCAATCGCCTCAGGAGTCTGAAGCGGCACTTCCTCGCCTTCATTCAAACTCTTCCGCGCAAAATCAGCTTCTGGAGTGAAGACTTCTTCCCAGGGCGCCCAACCGCGCTCAACCCAGTTACGCTTGCGAGCTTCGTCCTCTGTTTCCTTGTCTTTCGGACCAAAGTTCTCGAGGAAGGACTCGTCCACAGGGAACTCGTCTGA mRNA sequence ATGTCCATACTCTTCTCTATCAACATCCCAATCCCTCGGAGGCCAGTCCCGTGGAGGAACCACTTGAAGGACCAGCGGCCTAGTCCACGTCGTCTCAAGAGGCTCCGGTATCTCGCCTTTAATTTCGCATTGCGTGCGGTAATAGTCATCCTCCGTCAACCCCATTTCCTCCATCTTCTGCTTCCGGTACTTTGGGCTCAACATTTTGAAGGCTTCAATCGCCTCAGGAGTCTGAAGCGGCACTTCCTCGCCTTCATTCAAACTCTTCCGCGCAAAATCAGCTTCTGGAGTGAAGACTTCTTCCCAGGGCGCCCAACCGCGCTCAACCCAGTTACGCTTGCGAGCTTCGTCCTCTGTTTCCTTGTCTTTCGGACCAAAGTTCTCGAGGAAGGACTCGTCCACAGGGAACTCGTCTGA Coding sequence (CDS) ATGTCCATACTCTTCTCTATCAACATCCCAATCCCTCGGAGGCCAGTCCCGTGGAGGAACCACTTGAAGGACCAGCGGCCTAGTCCACGTCGTCTCAAGAGGCTCCGGTATCTCGCCTTTAATTTCGCATTGCGTGCGGTAATAGTCATCCTCCGTCAACCCCATTTCCTCCATCTTCTGCTTCCGGTACTTTGGGCTCAACATTTTGAAGGCTTCAATCGCCTCAGGAGTCTGAAGCGGCACTTCCTCGCCTTCATTCAAACTCTTCCGCGCAAAATCAGCTTCTGGAGTGAAGACTTCTTCCCAGGGCGCCCAACCGCGCTCAACCCAGTTACGCTTGCGAGCTTCGTCCTCTGTTTCCTTGTCTTTCGGACCAAAGTTCTCGAGGAAGGACTCGTCCACAGGGAACTCGTCTGA Protein sequence MSILFSINIPIPRRPVPWRNHLKDQRPSPRRLKRLRYLAFNFALRAVIVILRQPHFLHLLLPVLWAQHFEGFNRLRSLKRHFLAFIQTLPRKISFWSEDFFPGRPTALNPVTLASFVLCFLVFRTKVLEEGLVHRELV
Homology
BLAST of Lsi06G016230 vs. ExPASy TrEMBL
Match: A0A0A9KCL3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.8e-06 Identity = 40/115 (34.78%), Postives = 57/115 (49.57%), Query Frame = 0 Query: 4 LFSINIPIPRRPVPWRNHLKDQRPSPRRLKRLRYLAFNFALRAVIVILRQPHFLHLLLPV 63 L +++P RRPVP R+ L+ + PRRL+ L +A L P LL V Sbjct: 223 LVRVHLPAGRRPVPRRHELQREPAGPRRLEGLGRVACGEE------ALHVPRLSLHLLAV 282
Query: 64 LWAQHFEGFNRLRSLKRHFLAFIQTLPRKISFWSEDFFPGRPTALNPVTLASFVL 119 +H E LR L+RH LA ++ + R+ D PGRP+ L+P T A +L Sbjct: 283 GGREHAERLEGLRRLERHLLALVEAVAREGDLGGHDLLPGRPSMLHPATAAGDLL 331
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A9KCL3 | 3.8e-06 | 34.78 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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