Homology
BLAST of Lsi06G015940 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 584.7 bits (1506), Expect = 1.4e-165
Identity = 285/712 (40.03%), Postives = 444/712 (62.36%), Query Frame = 0
Query: 25 NPKSLILQQCKTSKDLHQVHAHLLK-----TRRLLDPIITEAVLESAALLLPNTIDYALS 84
+P +L CKT + L +HA ++K T L +I +L LP YA+S
Sbjct: 34 HPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP----YAIS 93
Query: 85 IFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSVEHDEFTFSCVLKACSRMRA 144
+F I +P +N M RG A P +AL L+ M + + +TF VLK+C++ +A
Sbjct: 94 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 153
Query: 145 LKEGEQVHTLILKSGSKPNEFVENTLIHM------------------------------- 204
KEG+Q+H +LK G + +V +LI M
Sbjct: 154 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 213
Query: 205 YANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTM 264
YA+ G + A+++FD +P + +V+WN+M+SGY + G + E ++LF+ M++ ++ D+ TM
Sbjct: 214 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 273
Query: 265 ISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDK 324
++V+ AC + +E+G + +I G N ++ +LID+Y+KCG ++TA LF+ +
Sbjct: 274 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 333
Query: 325 RDVVAWSAMISGYAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWV 384
+DV++W+ +I GY + KEAL LF EM + PN+VTM+S+L +CA LGA + G+W+
Sbjct: 334 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 393
Query: 385 HFYIKKKKMKLT--VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNG 444
H YI K+ +T +L T LID YAKCG I+ + +VF + K++ +W A+I G A +G
Sbjct: 394 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 453
Query: 445 EGKMALEFFSLMRENDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHY 504
+ + FS MR+ ++P+D+TF+G+LSACSH+ ++D GR++F +M +D+ + P++EHY
Sbjct: 454 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 513
Query: 505 GCMVDILGRAGLLEEAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEP 564
GCM+D+LG +GL +EA + I+ M + P+GV+W +LL +C+ H NVE+ E E++ ++EP
Sbjct: 514 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 573
Query: 565 AHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHT 624
+ G Y+LLSN YA GR + + R+L+ +K +KK PGCS IE+D VVHEF D H
Sbjct: 574 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 633
Query: 625 HSKEIHDALDKMMKRIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQ 684
++EI+ L++M ++ G+VP+ + E EEE KE ++ HHSEKLAIA+GLI T P
Sbjct: 634 RNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPG 693
Query: 685 TTIRISKNLRMCGDCHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
T + I KNLR+C +CH ATK IS++++R II RDR RFHHF+D +CSCNDYW
Sbjct: 694 TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Lsi06G015940 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 573.5 bits (1477), Expect = 3.1e-162
Identity = 283/703 (40.26%), Postives = 435/703 (61.88%), Query Frame = 0
Query: 30 ILQQCKTSKDLHQVHAHLLKTRRLLDPIITEAVLESAALLLPNTIDYALSIFNHIDKPES 89
++++C + + L Q H H+++T DP + AAL +++YA +F+ I KP S
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 90 SAYNVMIRGLAFKQSPHNALLLFKKM-HENSVEHDEFTFSCVLKACSRMRALKEGEQVHT 149
A+N +IR A P ++ F M E+ +++TF ++KA + + +L G+ +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 150 LILKSGSKPNEFVENTLIHMYANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLWNE 209
+ +KS + FV N+LIH Y +CG + A +VF + E+ +V+WNSM++G+ + G ++
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 210 VVKLFRKMLELHIEFDDVTMISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSLID 269
++LF+KM ++ VTM+ VL AC ++ +LE G + YI + N TL +++D
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 270 MYAKCGRVDTARNLFDEMD-------------------------------KRDVVAWSAM 329
MY KCG ++ A+ LFD M+ ++D+VAW+A+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 330 ISGYAQADRCKEALNLFHEMQKGKT-DPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKK 389
IS Y Q + EAL +FHE+Q K N++T+VS L +CA +GA E G+W+H YIKK
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 390 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFS 449
+++ + + LI Y+KCG +++S EVF + ++VF W+A+I GLA +G G A++ F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 450 LMRENDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRA 509
M+E +VKPN VTF V ACSH LVDE +LF+ M ++GI P +HY C+VD+LGR+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 510 GLLEEAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLS 569
G LE+A +FI+ MPIPP+ VW LL +C+ H N+ +AE + + LEP + G ++LLS
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 570 NTYALVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALD 629
N YA +G+ E+ +R ++ +KK PGCS IE+DG++HEF S D H S++++ L
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 630 KMMKRIKSIGYVPNIEDA-RLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNL 689
++M+++KS GY P I ++ EEE KE S++ HSEKLAI YGLI T IR+ KNL
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNL 695
Query: 690 RMCGDCHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
R+CGDCH+ K ISQ+++R IIVRDR RFHHF++ CSCND+W
Sbjct: 696 RVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Lsi06G015940 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 534.6 bits (1376), Expect = 1.6e-150
Identity = 265/670 (39.55%), Postives = 394/670 (58.81%), Query Frame = 0
Query: 31 LQQCKTSKDLHQVHAHLLKTRRLLDP-IITEAVLESAALLLPNTIDYALSIFNHIDKPES 90
LQ+C ++L Q+HA +LKT + D IT+ + + + + YA +F+ D+P++
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 91 SAYNVMIRGLAFKQSPHNALLLFKKMHENSVEHDEFTFSCVLKACSRMRALKEGEQVHTL 150
+N+MIRG + P +LLL+++M +S H+ +TF +LKACS + A +E Q+H
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 151 ILKSGSKPNEFVENTLIHMYANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLWNEV 210
I K G + + + N+LI+ YA G +A +FD +PE V+WNS++ G
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG---------- 200
Query: 211 VKLFRKMLELHIEFDDVTMISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSLIDM 270
Sbjct: 201 ------------------------------------------------------------ 260
Query: 271 YAKCGRVDTARNLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGKTDPNEVTM 330
Y K G++D A LF +M +++ ++W+ MISGY QAD KEAL LFHEMQ +P+ V++
Sbjct: 261 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 320
Query: 331 VSVLYSCAVLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMPF 390
+ L +CA LGA E GKW+H Y+ K ++++ LG LID YAKCG ++ ++EVFK +
Sbjct: 321 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 380
Query: 391 KNVFTWTALIQGLANNGEGKMALEFFSLMRENDVKPNDVTFIGVLSACSHACLVDEGRNL 450
K+V WTALI G A +G G+ A+ F M++ +KPN +TF VL+ACS+ LV+EG+ +
Sbjct: 381 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 440
Query: 451 FNSMRRDFGIEPRIEHYGCMVDILGRAGLLEEAYQFIDNMPIPPNGVVWRTLLASCRAHK 510
F SM RD+ ++P IEHYGC+VD+LGRAGLL+EA +FI MP+ PN V+W LL +CR HK
Sbjct: 441 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 500
Query: 511 NVEMAEKSMEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKTPGCSLI 570
N+E+ E+ E + ++P H G Y+ +N +A+ + + A R L+KE+ + K PGCS I
Sbjct: 501 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 560
Query: 571 ELDGVVHEFFSEDGEHTHSKEIHDALDKMMKRIKSIGYVPNIEDARLE-AEEESKETSVS 630
L+G HEF + D H ++I M ++++ GYVP +E+ L+ +++ +E V
Sbjct: 561 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 620
Query: 631 HHSEKLAIAYGLIRTSPQTTIRISKNLRMCGDCHNATKFISQVFERTIIVRDRNRFHHFK 690
HSEKLAI YGLI+T P T IRI KNLR+C DCH TK IS++++R I++RDR RFHHF+
Sbjct: 621 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 620
Query: 691 DSLCSCNDYW 699
D CSC DYW
Sbjct: 681 DGKCSCGDYW 620
BLAST of Lsi06G015940 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 532.3 bits (1370), Expect = 8.0e-150
Identity = 267/708 (37.71%), Postives = 423/708 (59.75%), Query Frame = 0
Query: 31 LQQCKTSKDLHQVHAHLLKT--RRLLDPIITEAVLESAALLLPNTIDYALSIFNHI-DKP 90
L CK+ + Q+HAH+L+T L+ + + S+++ + YAL++F+ I P
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSI----NLSYALNVFSSIPSPP 78
Query: 91 ESSAYNVMIRGLAFKQSPHNALLLFKKMHENSVEHDEFTFSCVLKACSRMRALKEGEQVH 150
ES +N +R L+ P +L ++++ D+F+F +LKA S++ AL EG ++H
Sbjct: 79 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 138
Query: 151 TLILKSGSKPNEFVENTLIHMYANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLWN 210
+ K + + FVE + MYA+CG++ AR VFD M R +V WN+M+ Y + GL +
Sbjct: 139 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 198
Query: 211 EVVKLFRKMLELHIEFDDVTMISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSLI 270
E KLF +M + ++ D++ + +++ ACGR ++ I E+++ + + L+T+L+
Sbjct: 199 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 258
Query: 271 DMYA-------------------------------KCGRVDTARNLFDEMDKRDVVAWSA 330
MYA KCGR+D A+ +FD+ +K+D+V W+
Sbjct: 259 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 318
Query: 331 MISGYAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKK 390
MIS Y ++D +EAL +F EM P+ V+M SV+ +CA LG + KWVH I
Sbjct: 319 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 378
Query: 391 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFS 450
++ +++ LI+ YAKCG +D + +VF++MP +NV +W+++I L+ +GE AL F+
Sbjct: 379 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 438
Query: 451 LMRENDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRA 510
M++ +V+PN+VTF+GVL CSH+ LV+EG+ +F SM ++ I P++EHYGCMVD+ GRA
Sbjct: 439 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 498
Query: 511 GLLEEAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLS 570
LL EA + I++MP+ N V+W +L+++CR H +E+ + + + I LEP H G +L+S
Sbjct: 499 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 558
Query: 571 NTYALVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALD 630
N YA R ED +R +++EK + K G S I+ +G HEF D H S EI+ LD
Sbjct: 559 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 618
Query: 631 KMMKRIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQT------TIR 690
+++ ++K GYVP+ ++ EEE K+ V HSEKLA+ +GL+ + IR
Sbjct: 619 EVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIR 678
Query: 691 ISKNLRMCGDCHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
I KNLR+C DCH K +S+V+ER IIVRDR RFH +K+ LCSC DYW
Sbjct: 679 IVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
BLAST of Lsi06G015940 vs. ExPASy Swiss-Prot
Match:
Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)
HSP 1 Score: 526.6 bits (1355), Expect = 4.4e-148
Identity = 260/672 (38.69%), Postives = 402/672 (59.82%), Query Frame = 0
Query: 27 KSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITEAVLESAALLLPNTIDYALSIFNHIDK 86
K+LI C T L Q+H L+ D + +L+ L Y+ +F+H
Sbjct: 17 KTLISVAC-TVNHLKQIHVSLINHHLHHDTFLVNLLLKRT--LFFRQTKYSYLLFSHTQF 76
Query: 87 PESSAYNVMIRGLAFKQSPHNALLLFKKMHENSVEHDEFTFSCVLKACSRMRALKEGEQV 146
P YN +I G H L LF + ++ + FTF VLKAC+R + K G +
Sbjct: 77 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 136
Query: 147 HTLILKSGSKPNEFVENTLIHMYANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLW 206
H+L++K G + +L+ +Y+ G++ A ++FD +P+R +V W ++ SGYT +G
Sbjct: 137 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 196
Query: 207 NEVVKLFRKMLELHIEFDDVTMISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSL 266
E + LF+KM+E+ ++ D ++ VL AC + DL+ GE I +Y+ + +N+ + T+L
Sbjct: 197 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 256
Query: 267 IDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGKTDPNE 326
+++YAKCG+++ AR++FD M ++D+V WS MI GYA KE + LF +M + P++
Sbjct: 257 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQ 316
Query: 327 VTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKE 386
++V L SCA LGA + G+W I + + + + LID YAKCG + R EVFKE
Sbjct: 317 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 376
Query: 387 MPFKNVFTWTALIQGLANNGEGKMALEFFSLMRENDVKPNDVTFIGVLSACSHACLVDEG 446
M K++ A I GLA NG K++ F + + P+ TF+G+L C HA L+ +G
Sbjct: 377 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 436
Query: 447 RNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLEEAYQFIDNMPIPPNGVVWRTLLASCR 506
FN++ + ++ +EHYGCMVD+ GRAG+L++AY+ I +MP+ PN +VW LL+ CR
Sbjct: 437 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 496
Query: 507 AHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKTPGC 566
K+ ++AE ++ + LEP ++G+Y+ LSN Y++ GR ++A VR ++ +K +KK PG
Sbjct: 497 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 556
Query: 567 SLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMKRIKSIGYVPNIEDARLEAEEESKETS 626
S IEL+G VHEF ++D H S +I+ L+ + ++ +G+VP E + EEE KE
Sbjct: 557 SWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERV 616
Query: 627 VSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGDCHNATKFISQVFERTIIVRDRNRFHH 686
+ +HSEKLA+A GLI T IR+ KNLR+CGDCH K IS++ R I+VRD NRFH
Sbjct: 617 LGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHC 676
Query: 687 FKDSLCSCNDYW 699
F + CSCNDYW
Sbjct: 677 FTNGSCSCNDYW 685
BLAST of Lsi06G015940 vs. ExPASy TrEMBL
Match:
A0A5D3BFH8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001050 PE=3 SV=1)
HSP 1 Score: 1302.0 bits (3368), Expect = 0.0e+00
Identity = 637/698 (91.26%), Postives = 665/698 (95.27%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS V CLP +LTSIT IS+FPENPKSLILQQCKT KDL QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLP+TIDYALSIFNHIDKPESSAYNVMIRGLAFK+SP NALLLFKKMHENSV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
+HD+FTFS VLKACSRMR LKEGEQVH LILKSG K NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGMPERGIVAWNSMLSGYTKNGLW+EVVKLF+K+LEL+I FDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LEMGELIGEYI+SKGL RNNTL+TSLIDMYAKCGR+DTAR LF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLITSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKG DPNEVTMVSVLYSCA+LGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEM FKNVFTWTALIQGLANNGEGKMALEFFSLM E
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
NDVKPNDVTFIGVLSACSHACLVD+GRNLFNSMRRDF IEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MP PPN VVWRTLLASCRAHKN+EMAEKS+EHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEH HSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
+IK++GYVPNIE ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSP+TTIRISKNLRMCGD
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATK+ISQ FER IIVRDRNRFHHFKD LCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of Lsi06G015940 vs. ExPASy TrEMBL
Match:
A0A1S4E4P2 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103502371 PE=3 SV=1)
HSP 1 Score: 1302.0 bits (3368), Expect = 0.0e+00
Identity = 637/698 (91.26%), Postives = 665/698 (95.27%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS V CLP +LTSIT IS+FPENPKSLILQQCKT KDL QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLP+TIDYALSIFNHIDKPESSAYNVMIRGLAFK+SP NALLLFKKMHENSV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
+HD+FTFS VLKACSRMR LKEGEQVH LILKSG K NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGMPERGIVAWNSMLSGYTKNGLW+EVVKLF+K+LEL+I FDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LEMGELIGEYI+SKGL RNNTL+TSLIDMYAKCGR+DTAR LF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLITSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKG DPNEVTMVSVLYSCA+LGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEM FKNVFTWTALIQGLANNGEGKMALEFFSLM E
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
NDVKPNDVTFIGVLSACSHACLVD+GRNLFNSMRRDF IEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MP PPN VVWRTLLASCRAHKN+EMAEKS+EHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEH HSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
+IK++GYVPNIE ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSP+TTIRISKNLRMCGD
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATK+ISQ FER IIVRDRNRFHHFKD LCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of Lsi06G015940 vs. ExPASy TrEMBL
Match:
A0A5A7URN2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001020 PE=3 SV=1)
HSP 1 Score: 1301.6 bits (3367), Expect = 0.0e+00
Identity = 637/698 (91.26%), Postives = 664/698 (95.13%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS V CLP +LTSIT IS+FPENPKSLILQQCKT KDL QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLP+TIDYALSIFNHIDKPESSAYNVMIRGLAFK+SP NALLLFKKMHENSV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
+HD+FTFS VLKACSRMR LKEGEQVH LILKSG K NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGMPERGIVAWNSMLSGYTKNGLW+EVVKLF+K+LEL+I FDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LEMGELIGEYI+SKGL RNNTLMTSLIDMYAKCGR+DTAR LF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLMTSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKG DPNEVTMVSVLYSCA+LGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEM FKNVFTWTALIQGLANNGEGKMALEFF LM E
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFCLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
NDVKPNDVTFIGVLSACSHACLVD+GRNLFNSMRRDF IEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MP PPN VVWRTLLASCRAHKN+EMAEKS+EHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEH HSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
+IK++GYVPNIE ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSP+TTIRISKNLRMCGD
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATK+ISQ FER IIVRDRNRFHHFKD LCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of Lsi06G015940 vs. ExPASy TrEMBL
Match:
A0A0A0LRD6 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G003520 PE=3 SV=1)
HSP 1 Score: 1292.3 bits (3343), Expect = 0.0e+00
Identity = 637/698 (91.26%), Postives = 661/698 (94.70%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS V CLPNI+LTSIT +FPENPKSLILQQCKT KDL QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLP+TIDYALSIFNHIDKPESSAYNVMIRGLAFK+SP NALLLFKKMHE SV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
+HD+FTFS VLKACSRM+AL+EGEQVH LILKSG K NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGMPER IVAWNSMLSGYTKNGLW+EVVKLFRK+LEL IEFDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYI+SKGL RNNTL TSLIDMYAKCG+VDTAR LFDEMDKRDVVAWSAMISG
Sbjct: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKG PNEVTMVSVLYSCA+LGAYETGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEM FKNVFTWTALIQGLANNGEGKMALEFFS M E
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
NDVKPNDVTFIGVLSACSHACLVD+GR+LFNSMRRDF IEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFIDNMP PPN VVWRTLLASCRAHKN+EMAEKS+EHITRLEPAHSGDYILLSNTYA
Sbjct: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKK PGCSLIELDGVVHEFFSEDGEH HSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
+IK +GYVPN +DARLEAEEESKETSVSHHSEKLAIAYGLIRTSP+TTIRISKNLRMC D
Sbjct: 601 QIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATKFISQVFER IIVRDRNRFHHFKD LCSCNDYW
Sbjct: 661 CHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
BLAST of Lsi06G015940 vs. ExPASy TrEMBL
Match:
A0A6J1C4F8 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111007294 PE=3 SV=1)
HSP 1 Score: 1288.1 bits (3332), Expect = 0.0e+00
Identity = 621/698 (88.97%), Postives = 664/698 (95.13%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS +AC P ++T+ITHIS+FPENPK+LILQQCKT KDLHQVHAHL+KTRRLLDP ITE
Sbjct: 1 MASALACFPANSVTTITHISQFPENPKTLILQQCKTPKDLHQVHAHLVKTRRLLDPTITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLPNTIDYALSIFNHID+PESSAYNVMIRGL+FKQSPHNA LLFKKMHENSV
Sbjct: 61 AVLESAALLLPNTIDYALSIFNHIDRPESSAYNVMIRGLSFKQSPHNAFLLFKKMHENSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
EHD FTFSCVLKACSRMRAL+EGEQVH ILKSG KPNEFVENTLIHMYANCG+VG+AR+
Sbjct: 121 EHDGFTFSCVLKACSRMRALREGEQVHAQILKSGRKPNEFVENTLIHMYANCGEVGIARR 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGM ERG++AWNSMLSGYTKNG+W+EVVKLF++MLELHIEFDDVTMISVLMACGRLAD
Sbjct: 181 VFDGMSERGVIAWNSMLSGYTKNGIWHEVVKLFKRMLELHIEFDDVTMISVLMACGRLAD 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYI+SKGLT N +L TSLIDMYAKCGRVDTA LFD+M KRDVVAWSAMISG
Sbjct: 241 LELGELIGEYIVSKGLTGNRSLTTSLIDMYAKCGRVDTAWKLFDKMHKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQK K DPNEVTMVSVLYSCA+LGAYETGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKAKVDPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGY D SVEVF+EMP +NVFTWTALIQGLANNGEGK+AL+FFSLMRE
Sbjct: 361 VTLGTQLIDFYAKCGYTDSSVEVFREMPIRNVFTWTALIQGLANNGEGKLALDFFSLMRE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
N+VKPNDVTFIGVLSACSHACLVD+GR+LFNSM RDF IEPRIEHYGCMVDILGRAGLLE
Sbjct: 421 NNVKPNDVTFIGVLSACSHACLVDQGRHLFNSMGRDFDIEPRIEHYGCMVDILGRAGLLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFIDNMPIPPN VVWRTLLASCRAHKNVEMAEKS+EHIT+LEPAHSGDYILLSNTYA
Sbjct: 481 EAYQFIDNMPIPPNAVVWRTLLASCRAHKNVEMAEKSLEHITQLEPAHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
GRVEDA+RVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDG+HTHSKEIH+ALD+MMK
Sbjct: 541 FAGRVEDALRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGQHTHSKEIHNALDEMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
RI+ +GYVPNIEDARLEAEE+SKETSVSHHSEKLAIAYGLIRT P+T IRISKNLRMC D
Sbjct: 601 RIRLLGYVPNIEDARLEAEEDSKETSVSHHSEKLAIAYGLIRTPPRTIIRISKNLRMCRD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATK IS+VF+RTIIVRDRNRFHHFKD LCSCNDYW
Sbjct: 661 CHNATKVISRVFDRTIIVRDRNRFHHFKDGLCSCNDYW 698
BLAST of Lsi06G015940 vs. NCBI nr
Match:
XP_016903201.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucumis melo] >TYJ98502.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1302.0 bits (3368), Expect = 0.0e+00
Identity = 637/698 (91.26%), Postives = 665/698 (95.27%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS V CLP +LTSIT IS+FPENPKSLILQQCKT KDL QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLP+TIDYALSIFNHIDKPESSAYNVMIRGLAFK+SP NALLLFKKMHENSV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
+HD+FTFS VLKACSRMR LKEGEQVH LILKSG K NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGMPERGIVAWNSMLSGYTKNGLW+EVVKLF+K+LEL+I FDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LEMGELIGEYI+SKGL RNNTL+TSLIDMYAKCGR+DTAR LF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLITSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKG DPNEVTMVSVLYSCA+LGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEM FKNVFTWTALIQGLANNGEGKMALEFFSLM E
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
NDVKPNDVTFIGVLSACSHACLVD+GRNLFNSMRRDF IEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MP PPN VVWRTLLASCRAHKN+EMAEKS+EHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEH HSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
+IK++GYVPNIE ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSP+TTIRISKNLRMCGD
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATK+ISQ FER IIVRDRNRFHHFKD LCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of Lsi06G015940 vs. NCBI nr
Match:
KAA0057818.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1301.6 bits (3367), Expect = 0.0e+00
Identity = 637/698 (91.26%), Postives = 664/698 (95.13%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS V CLP +LTSIT IS+FPENPKSLILQQCKT KDL QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLP+TIDYALSIFNHIDKPESSAYNVMIRGLAFK+SP NALLLFKKMHENSV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
+HD+FTFS VLKACSRMR LKEGEQVH LILKSG K NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGMPERGIVAWNSMLSGYTKNGLW+EVVKLF+K+LEL+I FDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LEMGELIGEYI+SKGL RNNTLMTSLIDMYAKCGR+DTAR LF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLMTSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKG DPNEVTMVSVLYSCA+LGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEM FKNVFTWTALIQGLANNGEGKMALEFF LM E
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFCLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
NDVKPNDVTFIGVLSACSHACLVD+GRNLFNSMRRDF IEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MP PPN VVWRTLLASCRAHKN+EMAEKS+EHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEH HSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
+IK++GYVPNIE ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSP+TTIRISKNLRMCGD
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATK+ISQ FER IIVRDRNRFHHFKD LCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of Lsi06G015940 vs. NCBI nr
Match:
XP_004138266.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sativus] >KGN63534.1 hypothetical protein Csa_013924 [Cucumis sativus])
HSP 1 Score: 1292.3 bits (3343), Expect = 0.0e+00
Identity = 637/698 (91.26%), Postives = 661/698 (94.70%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS V CLPNI+LTSIT +FPENPKSLILQQCKT KDL QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLP+TIDYALSIFNHIDKPESSAYNVMIRGLAFK+SP NALLLFKKMHE SV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
+HD+FTFS VLKACSRM+AL+EGEQVH LILKSG K NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGMPER IVAWNSMLSGYTKNGLW+EVVKLFRK+LEL IEFDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYI+SKGL RNNTL TSLIDMYAKCG+VDTAR LFDEMDKRDVVAWSAMISG
Sbjct: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKG PNEVTMVSVLYSCA+LGAYETGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEM FKNVFTWTALIQGLANNGEGKMALEFFS M E
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
NDVKPNDVTFIGVLSACSHACLVD+GR+LFNSMRRDF IEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFIDNMP PPN VVWRTLLASCRAHKN+EMAEKS+EHITRLEPAHSGDYILLSNTYA
Sbjct: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKK PGCSLIELDGVVHEFFSEDGEH HSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
+IK +GYVPN +DARLEAEEESKETSVSHHSEKLAIAYGLIRTSP+TTIRISKNLRMC D
Sbjct: 601 QIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATKFISQVFER IIVRDRNRFHHFKD LCSCNDYW
Sbjct: 661 CHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
BLAST of Lsi06G015940 vs. NCBI nr
Match:
XP_022135298.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Momordica charantia])
HSP 1 Score: 1288.1 bits (3332), Expect = 0.0e+00
Identity = 621/698 (88.97%), Postives = 664/698 (95.13%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS +AC P ++T+ITHIS+FPENPK+LILQQCKT KDLHQVHAHL+KTRRLLDP ITE
Sbjct: 1 MASALACFPANSVTTITHISQFPENPKTLILQQCKTPKDLHQVHAHLVKTRRLLDPTITE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLPNTIDYALSIFNHID+PESSAYNVMIRGL+FKQSPHNA LLFKKMHENSV
Sbjct: 61 AVLESAALLLPNTIDYALSIFNHIDRPESSAYNVMIRGLSFKQSPHNAFLLFKKMHENSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
EHD FTFSCVLKACSRMRAL+EGEQVH ILKSG KPNEFVENTLIHMYANCG+VG+AR+
Sbjct: 121 EHDGFTFSCVLKACSRMRALREGEQVHAQILKSGRKPNEFVENTLIHMYANCGEVGIARR 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGM ERG++AWNSMLSGYTKNG+W+EVVKLF++MLELHIEFDDVTMISVLMACGRLAD
Sbjct: 181 VFDGMSERGVIAWNSMLSGYTKNGIWHEVVKLFKRMLELHIEFDDVTMISVLMACGRLAD 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYI+SKGLT N +L TSLIDMYAKCGRVDTA LFD+M KRDVVAWSAMISG
Sbjct: 241 LELGELIGEYIVSKGLTGNRSLTTSLIDMYAKCGRVDTAWKLFDKMHKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQK K DPNEVTMVSVLYSCA+LGAYETGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKAKVDPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
VTLGTQLIDFYAKCGY D SVEVF+EMP +NVFTWTALIQGLANNGEGK+AL+FFSLMRE
Sbjct: 361 VTLGTQLIDFYAKCGYTDSSVEVFREMPIRNVFTWTALIQGLANNGEGKLALDFFSLMRE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
N+VKPNDVTFIGVLSACSHACLVD+GR+LFNSM RDF IEPRIEHYGCMVDILGRAGLLE
Sbjct: 421 NNVKPNDVTFIGVLSACSHACLVDQGRHLFNSMGRDFDIEPRIEHYGCMVDILGRAGLLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFIDNMPIPPN VVWRTLLASCRAHKNVEMAEKS+EHIT+LEPAHSGDYILLSNTYA
Sbjct: 481 EAYQFIDNMPIPPNAVVWRTLLASCRAHKNVEMAEKSLEHITQLEPAHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
GRVEDA+RVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDG+HTHSKEIH+ALD+MMK
Sbjct: 541 FAGRVEDALRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGQHTHSKEIHNALDEMMK 600
Query: 601 RIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGD 660
RI+ +GYVPNIEDARLEAEE+SKETSVSHHSEKLAIAYGLIRT P+T IRISKNLRMC D
Sbjct: 601 RIRLLGYVPNIEDARLEAEEDSKETSVSHHSEKLAIAYGLIRTPPRTIIRISKNLRMCRD 660
Query: 661 CHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
CHNATK IS+VF+RTIIVRDRNRFHHFKD LCSCNDYW
Sbjct: 661 CHNATKVISRVFDRTIIVRDRNRFHHFKDGLCSCNDYW 698
BLAST of Lsi06G015940 vs. NCBI nr
Match:
XP_022921781.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1283.9 bits (3321), Expect = 0.0e+00
Identity = 628/699 (89.84%), Postives = 665/699 (95.14%), Query Frame = 0
Query: 1 MASTVACLPNITLTSITHISKFPENPKSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITE 60
MAS VACLPNI++TSITH+S+FPENPKSLILQ+CKT KDL QVHAHLLKTRRL DP I E
Sbjct: 1 MASIVACLPNISVTSITHLSQFPENPKSLILQRCKTPKDLRQVHAHLLKTRRLQDPTIAE 60
Query: 61 AVLESAALLLPNTIDYALSIFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSV 120
AVLESAALLLPN+IDYALSIFNH+DKPESSAYNVMIRGLAFKQSPHNA+LLFKKMHENSV
Sbjct: 61 AVLESAALLLPNSIDYALSIFNHMDKPESSAYNVMIRGLAFKQSPHNAVLLFKKMHENSV 120
Query: 121 EHDEFTFSCVLKACSRMRALKEGEQVHTLILKSGSKPNEFVENTLIHMYANCGQVGVARQ 180
+HD+FTFS VLKACSRMRAL+EGEQVH LILKSG KPNEFVENTLIHMYANCGQVGVARQ
Sbjct: 121 QHDKFTFSSVLKACSRMRALREGEQVHALILKSGFKPNEFVENTLIHMYANCGQVGVARQ 180
Query: 181 VFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
VFDGM +R VAWNSMLSGYTKNGLW+EVVKLFRKMLELHIEFDDVTMISVLMACGRLAD
Sbjct: 181 VFDGMSQRATVAWNSMLSGYTKNGLWDEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
Query: 241 LEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYI+SKG+ RN+TL TSLIDMYAKCG+VDTAR LFDEMDKRDVVAWSAMISG
Sbjct: 241 LELGELIGEYILSKGIRRNSTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEAL+LFHEMQK K D NEVTMVSVLYSCAVLGAYETGKWVH YIK+KKMKLT
Sbjct: 301 YAQADRCKEALDLFHEMQKAKVDANEVTMVSVLYSCAVLGAYETGKWVHSYIKRKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFSLMRE 420
V+LGTQLIDFYAKCGYIDRSVEVF+ MPF NVFTWTALIQGLANNGEGKMAL+FF+LMRE
Sbjct: 361 VSLGTQLIDFYAKCGYIDRSVEVFRAMPFANVFTWTALIQGLANNGEGKMALDFFALMRE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLE 480
N+VKPNDVTFI VLSACSHACLVD+GR+LFNSMRR F IEPRIEHYGCMVDILGRAGLLE
Sbjct: 421 NNVKPNDVTFIAVLSACSHACLVDQGRHLFNSMRRGFDIEPRIEHYGCMVDILGRAGLLE 480
Query: 481 EAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYA 540
EAYQFI NMPIPPN VVWRTLLASC+AHKNVEMAEKS +HIT LEPAHSGDYILLSNTYA
Sbjct: 481 EAYQFIANMPIPPNAVVWRTLLASCKAHKNVEMAEKSFDHITLLEPAHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMK 600
LVGRVEDA+RVRSLIK+KEIKKTPGCSLIELDGVVHEFFSEDG+HTHSKEIHDALD+MMK
Sbjct: 541 LVGRVEDALRVRSLIKDKEIKKTPGCSLIELDGVVHEFFSEDGDHTHSKEIHDALDEMMK 600
Query: 601 RIKSIGYVPNIEDARLEA-EEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCG 660
RIKS+GYVPN+EDARLEA EEESKETSVSHHSEKLAIAYGLIRT QTTIRISKNLRMC
Sbjct: 601 RIKSLGYVPNMEDARLEAEEEESKETSVSHHSEKLAIAYGLIRTPLQTTIRISKNLRMCR 660
Query: 661 DCHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
DCHNATK ISQV++RTIIVRDRNRFHHFKD LCSCNDYW
Sbjct: 661 DCHNATKVISQVYKRTIIVRDRNRFHHFKDGLCSCNDYW 699
BLAST of Lsi06G015940 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 584.7 bits (1506), Expect = 9.7e-167
Identity = 285/712 (40.03%), Postives = 444/712 (62.36%), Query Frame = 0
Query: 25 NPKSLILQQCKTSKDLHQVHAHLLK-----TRRLLDPIITEAVLESAALLLPNTIDYALS 84
+P +L CKT + L +HA ++K T L +I +L LP YA+S
Sbjct: 34 HPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP----YAIS 93
Query: 85 IFNHIDKPESSAYNVMIRGLAFKQSPHNALLLFKKMHENSVEHDEFTFSCVLKACSRMRA 144
+F I +P +N M RG A P +AL L+ M + + +TF VLK+C++ +A
Sbjct: 94 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 153
Query: 145 LKEGEQVHTLILKSGSKPNEFVENTLIHM------------------------------- 204
KEG+Q+H +LK G + +V +LI M
Sbjct: 154 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 213
Query: 205 YANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLWNEVVKLFRKMLELHIEFDDVTM 264
YA+ G + A+++FD +P + +V+WN+M+SGY + G + E ++LF+ M++ ++ D+ TM
Sbjct: 214 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 273
Query: 265 ISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSLIDMYAKCGRVDTARNLFDEMDK 324
++V+ AC + +E+G + +I G N ++ +LID+Y+KCG ++TA LF+ +
Sbjct: 274 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 333
Query: 325 RDVVAWSAMISGYAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWV 384
+DV++W+ +I GY + KEAL LF EM + PN+VTM+S+L +CA LGA + G+W+
Sbjct: 334 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 393
Query: 385 HFYIKKKKMKLT--VTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNG 444
H YI K+ +T +L T LID YAKCG I+ + +VF + K++ +W A+I G A +G
Sbjct: 394 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 453
Query: 445 EGKMALEFFSLMRENDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHY 504
+ + FS MR+ ++P+D+TF+G+LSACSH+ ++D GR++F +M +D+ + P++EHY
Sbjct: 454 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 513
Query: 505 GCMVDILGRAGLLEEAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEP 564
GCM+D+LG +GL +EA + I+ M + P+GV+W +LL +C+ H NVE+ E E++ ++EP
Sbjct: 514 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 573
Query: 565 AHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHT 624
+ G Y+LLSN YA GR + + R+L+ +K +KK PGCS IE+D VVHEF D H
Sbjct: 574 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 633
Query: 625 HSKEIHDALDKMMKRIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQ 684
++EI+ L++M ++ G+VP+ + E EEE KE ++ HHSEKLAIA+GLI T P
Sbjct: 634 RNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPG 693
Query: 685 TTIRISKNLRMCGDCHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
T + I KNLR+C +CH ATK IS++++R II RDR RFHHF+D +CSCNDYW
Sbjct: 694 TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Lsi06G015940 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 573.5 bits (1477), Expect = 2.2e-163
Identity = 283/703 (40.26%), Postives = 435/703 (61.88%), Query Frame = 0
Query: 30 ILQQCKTSKDLHQVHAHLLKTRRLLDPIITEAVLESAALLLPNTIDYALSIFNHIDKPES 89
++++C + + L Q H H+++T DP + AAL +++YA +F+ I KP S
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 90 SAYNVMIRGLAFKQSPHNALLLFKKM-HENSVEHDEFTFSCVLKACSRMRALKEGEQVHT 149
A+N +IR A P ++ F M E+ +++TF ++KA + + +L G+ +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 150 LILKSGSKPNEFVENTLIHMYANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLWNE 209
+ +KS + FV N+LIH Y +CG + A +VF + E+ +V+WNSM++G+ + G ++
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 210 VVKLFRKMLELHIEFDDVTMISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSLID 269
++LF+KM ++ VTM+ VL AC ++ +LE G + YI + N TL +++D
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 270 MYAKCGRVDTARNLFDEMD-------------------------------KRDVVAWSAM 329
MY KCG ++ A+ LFD M+ ++D+VAW+A+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 330 ISGYAQADRCKEALNLFHEMQKGKT-DPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKK 389
IS Y Q + EAL +FHE+Q K N++T+VS L +CA +GA E G+W+H YIKK
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 390 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFS 449
+++ + + LI Y+KCG +++S EVF + ++VF W+A+I GLA +G G A++ F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 450 LMRENDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRA 509
M+E +VKPN VTF V ACSH LVDE +LF+ M ++GI P +HY C+VD+LGR+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 510 GLLEEAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLS 569
G LE+A +FI+ MPIPP+ VW LL +C+ H N+ +AE + + LEP + G ++LLS
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 570 NTYALVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALD 629
N YA +G+ E+ +R ++ +KK PGCS IE+DG++HEF S D H S++++ L
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 630 KMMKRIKSIGYVPNIEDA-RLEAEEESKETSVSHHSEKLAIAYGLIRTSPQTTIRISKNL 689
++M+++KS GY P I ++ EEE KE S++ HSEKLAI YGLI T IR+ KNL
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNL 695
Query: 690 RMCGDCHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
R+CGDCH+ K ISQ+++R IIVRDR RFHHF++ CSCND+W
Sbjct: 696 RVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Lsi06G015940 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 534.6 bits (1376), Expect = 1.2e-151
Identity = 265/670 (39.55%), Postives = 394/670 (58.81%), Query Frame = 0
Query: 31 LQQCKTSKDLHQVHAHLLKTRRLLDP-IITEAVLESAALLLPNTIDYALSIFNHIDKPES 90
LQ+C ++L Q+HA +LKT + D IT+ + + + + YA +F+ D+P++
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 91 SAYNVMIRGLAFKQSPHNALLLFKKMHENSVEHDEFTFSCVLKACSRMRALKEGEQVHTL 150
+N+MIRG + P +LLL+++M +S H+ +TF +LKACS + A +E Q+H
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 151 ILKSGSKPNEFVENTLIHMYANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLWNEV 210
I K G + + + N+LI+ YA G +A +FD +PE V+WNS++ G
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG---------- 200
Query: 211 VKLFRKMLELHIEFDDVTMISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSLIDM 270
Sbjct: 201 ------------------------------------------------------------ 260
Query: 271 YAKCGRVDTARNLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGKTDPNEVTM 330
Y K G++D A LF +M +++ ++W+ MISGY QAD KEAL LFHEMQ +P+ V++
Sbjct: 261 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 320
Query: 331 VSVLYSCAVLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMPF 390
+ L +CA LGA E GKW+H Y+ K ++++ LG LID YAKCG ++ ++EVFK +
Sbjct: 321 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 380
Query: 391 KNVFTWTALIQGLANNGEGKMALEFFSLMRENDVKPNDVTFIGVLSACSHACLVDEGRNL 450
K+V WTALI G A +G G+ A+ F M++ +KPN +TF VL+ACS+ LV+EG+ +
Sbjct: 381 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 440
Query: 451 FNSMRRDFGIEPRIEHYGCMVDILGRAGLLEEAYQFIDNMPIPPNGVVWRTLLASCRAHK 510
F SM RD+ ++P IEHYGC+VD+LGRAGLL+EA +FI MP+ PN V+W LL +CR HK
Sbjct: 441 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 500
Query: 511 NVEMAEKSMEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKTPGCSLI 570
N+E+ E+ E + ++P H G Y+ +N +A+ + + A R L+KE+ + K PGCS I
Sbjct: 501 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 560
Query: 571 ELDGVVHEFFSEDGEHTHSKEIHDALDKMMKRIKSIGYVPNIEDARLE-AEEESKETSVS 630
L+G HEF + D H ++I M ++++ GYVP +E+ L+ +++ +E V
Sbjct: 561 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 620
Query: 631 HHSEKLAIAYGLIRTSPQTTIRISKNLRMCGDCHNATKFISQVFERTIIVRDRNRFHHFK 690
HSEKLAI YGLI+T P T IRI KNLR+C DCH TK IS++++R I++RDR RFHHF+
Sbjct: 621 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 620
Query: 691 DSLCSCNDYW 699
D CSC DYW
Sbjct: 681 DGKCSCGDYW 620
BLAST of Lsi06G015940 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 532.3 bits (1370), Expect = 5.7e-151
Identity = 267/708 (37.71%), Postives = 423/708 (59.75%), Query Frame = 0
Query: 31 LQQCKTSKDLHQVHAHLLKT--RRLLDPIITEAVLESAALLLPNTIDYALSIFNHI-DKP 90
L CK+ + Q+HAH+L+T L+ + + S+++ + YAL++F+ I P
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSI----NLSYALNVFSSIPSPP 78
Query: 91 ESSAYNVMIRGLAFKQSPHNALLLFKKMHENSVEHDEFTFSCVLKACSRMRALKEGEQVH 150
ES +N +R L+ P +L ++++ D+F+F +LKA S++ AL EG ++H
Sbjct: 79 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 138
Query: 151 TLILKSGSKPNEFVENTLIHMYANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLWN 210
+ K + + FVE + MYA+CG++ AR VFD M R +V WN+M+ Y + GL +
Sbjct: 139 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 198
Query: 211 EVVKLFRKMLELHIEFDDVTMISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSLI 270
E KLF +M + ++ D++ + +++ ACGR ++ I E+++ + + L+T+L+
Sbjct: 199 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 258
Query: 271 DMYA-------------------------------KCGRVDTARNLFDEMDKRDVVAWSA 330
MYA KCGR+D A+ +FD+ +K+D+V W+
Sbjct: 259 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 318
Query: 331 MISGYAQADRCKEALNLFHEMQKGKTDPNEVTMVSVLYSCAVLGAYETGKWVHFYIKKKK 390
MIS Y ++D +EAL +F EM P+ V+M SV+ +CA LG + KWVH I
Sbjct: 319 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 378
Query: 391 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMPFKNVFTWTALIQGLANNGEGKMALEFFS 450
++ +++ LI+ YAKCG +D + +VF++MP +NV +W+++I L+ +GE AL F+
Sbjct: 379 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 438
Query: 451 LMRENDVKPNDVTFIGVLSACSHACLVDEGRNLFNSMRRDFGIEPRIEHYGCMVDILGRA 510
M++ +V+PN+VTF+GVL CSH+ LV+EG+ +F SM ++ I P++EHYGCMVD+ GRA
Sbjct: 439 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 498
Query: 511 GLLEEAYQFIDNMPIPPNGVVWRTLLASCRAHKNVEMAEKSMEHITRLEPAHSGDYILLS 570
LL EA + I++MP+ N V+W +L+++CR H +E+ + + + I LEP H G +L+S
Sbjct: 499 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 558
Query: 571 NTYALVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHTHSKEIHDALD 630
N YA R ED +R +++EK + K G S I+ +G HEF D H S EI+ LD
Sbjct: 559 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 618
Query: 631 KMMKRIKSIGYVPNIEDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPQT------TIR 690
+++ ++K GYVP+ ++ EEE K+ V HSEKLA+ +GL+ + IR
Sbjct: 619 EVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIR 678
Query: 691 ISKNLRMCGDCHNATKFISQVFERTIIVRDRNRFHHFKDSLCSCNDYW 699
I KNLR+C DCH K +S+V+ER IIVRDR RFH +K+ LCSC DYW
Sbjct: 679 IVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
BLAST of Lsi06G015940 vs. TAIR 10
Match:
AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 526.6 bits (1355), Expect = 3.1e-149
Identity = 260/672 (38.69%), Postives = 402/672 (59.82%), Query Frame = 0
Query: 27 KSLILQQCKTSKDLHQVHAHLLKTRRLLDPIITEAVLESAALLLPNTIDYALSIFNHIDK 86
K+LI C T L Q+H L+ D + +L+ L Y+ +F+H
Sbjct: 17 KTLISVAC-TVNHLKQIHVSLINHHLHHDTFLVNLLLKRT--LFFRQTKYSYLLFSHTQF 76
Query: 87 PESSAYNVMIRGLAFKQSPHNALLLFKKMHENSVEHDEFTFSCVLKACSRMRALKEGEQV 146
P YN +I G H L LF + ++ + FTF VLKAC+R + K G +
Sbjct: 77 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 136
Query: 147 HTLILKSGSKPNEFVENTLIHMYANCGQVGVARQVFDGMPERGIVAWNSMLSGYTKNGLW 206
H+L++K G + +L+ +Y+ G++ A ++FD +P+R +V W ++ SGYT +G
Sbjct: 137 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 196
Query: 207 NEVVKLFRKMLELHIEFDDVTMISVLMACGRLADLEMGELIGEYIMSKGLTRNNTLMTSL 266
E + LF+KM+E+ ++ D ++ VL AC + DL+ GE I +Y+ + +N+ + T+L
Sbjct: 197 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 256
Query: 267 IDMYAKCGRVDTARNLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGKTDPNE 326
+++YAKCG+++ AR++FD M ++D+V WS MI GYA KE + LF +M + P++
Sbjct: 257 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQ 316
Query: 327 VTMVSVLYSCAVLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKE 386
++V L SCA LGA + G+W I + + + + LID YAKCG + R EVFKE
Sbjct: 317 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 376
Query: 387 MPFKNVFTWTALIQGLANNGEGKMALEFFSLMRENDVKPNDVTFIGVLSACSHACLVDEG 446
M K++ A I GLA NG K++ F + + P+ TF+G+L C HA L+ +G
Sbjct: 377 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 436
Query: 447 RNLFNSMRRDFGIEPRIEHYGCMVDILGRAGLLEEAYQFIDNMPIPPNGVVWRTLLASCR 506
FN++ + ++ +EHYGCMVD+ GRAG+L++AY+ I +MP+ PN +VW LL+ CR
Sbjct: 437 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 496
Query: 507 AHKNVEMAEKSMEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKTPGC 566
K+ ++AE ++ + LEP ++G+Y+ LSN Y++ GR ++A VR ++ +K +KK PG
Sbjct: 497 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 556
Query: 567 SLIELDGVVHEFFSEDGEHTHSKEIHDALDKMMKRIKSIGYVPNIEDARLEAEEESKETS 626
S IEL+G VHEF ++D H S +I+ L+ + ++ +G+VP E + EEE KE
Sbjct: 557 SWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERV 616
Query: 627 VSHHSEKLAIAYGLIRTSPQTTIRISKNLRMCGDCHNATKFISQVFERTIIVRDRNRFHH 686
+ +HSEKLA+A GLI T IR+ KNLR+CGDCH K IS++ R I+VRD NRFH
Sbjct: 617 LGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHC 676
Query: 687 FKDSLCSCNDYW 699
F + CSCNDYW
Sbjct: 677 FTNGSCSCNDYW 685
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LN01 | 1.4e-165 | 40.03 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| O82380 | 3.1e-162 | 40.26 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| Q9FJY7 | 1.6e-150 | 39.55 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
| O23337 | 8.0e-150 | 37.71 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
| Q9SR82 | 4.4e-148 | 38.69 | Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BFH8 | 0.0e+00 | 91.26 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S4E4P2 | 0.0e+00 | 91.26 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
| A0A5A7URN2 | 0.0e+00 | 91.26 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A0A0LRD6 | 0.0e+00 | 91.26 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0035... | [more] |
| A0A6J1C4F8 | 0.0e+00 | 88.97 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Mom... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_016903201.1 | 0.0e+00 | 91.26 | PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... | [more] |
| KAA0057818.1 | 0.0e+00 | 91.26 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| XP_004138266.1 | 0.0e+00 | 91.26 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sa... | [more] |
| XP_022135298.1 | 0.0e+00 | 88.97 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Momor... | [more] |
| XP_022921781.1 | 0.0e+00 | 89.84 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G08070.1 | 9.7e-167 | 40.03 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G29760.1 | 2.2e-163 | 40.26 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G66520.1 | 1.2e-151 | 39.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G14820.1 | 5.7e-151 | 37.71 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G08820.1 | 3.1e-149 | 38.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
