Lsi06G015920 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G015920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Elongation factor Tu
Location	chr06: 26309646 .. 26311079 (+)
RNA-Seq Expression	Lsi06G015920
Synteny	Lsi06G015920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCATTTCCTTAGCTTCCGCTTCCACTTCCTCTAAGCTTGTTTTCCCTCACCCTTCTTCTTCTTCTTCTTCCTCCTCCCCTTCTTCTTCCCTTCTCGTCAAACCCTCCTCTGTTACCAACCTTTCTTCCTCTTTCTTGAACCCTTCTTCTATTCGCCCTCTCTCCCTTTCTTCCCCCTCTGTAAACCGTCCTCGTTCCTTCACAATTCGAGCCGCCCGTGGCAAATTCGAGAGGAAGAAACCCCATGTCAATATCGGCACAATTGGCCATGTCGACCATGGTAAAACCACTCTTACCGCCGCTTTGACCATGGCTTTGAGCAAAGCCCCAAAGAAATACGACGAAATTGACGCTGCCCCAGAAGAGCGAGCTCGTGGTATTACAATTAATACAGCTACCGTCGAGTACGAGACTGAGAGCCGACATTACGCTCATGTTGATTGTCCTGGCCATGCTGATTATGTCAAGAACATGATTACTGGTGCTGCTCAAATGGATGGAGCAATTTTGGTGGTTTCCGGTGCTGATGGCCCAATGCCACAGACGAAGGAGCATATTTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTCAACAAGAAGGATCAAGTTGATGATGAGGAGCTTCTGCAGCTTGTGGAATTGGAGATGCGTGAGTTGCTTTCTTCCTATGAATTCCCAGGTGATGATGTTCCAATTATTGCTGGTTCTGCTTTGTTAGCTTTGGAAGCTTTAATGGCTAATAACAATATAGCTAGAGGAGAAAATGAATGGGTGGATAAAATTTTTGAACTTATGGATGCTGTTGATAGCTATATACCAATACCTGAAAGACAAACAGATCTTCCATTTTTGCTTGCTGTTGAAGATGTGTTTTCTATTACTGGTCGTGGTACTGTGGCTACAGGGCGTGTTGAAAGGGGAACTGTTAGAGTGGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGAAACACAACAGTAACAGGAGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGGGATAATGTTGGTTTGTTGCTTAGAGGTGTTCAGAAGGCTGATATCCAAAGAGGGATGGTTTTAGCCAAGCCTGGCACTATCACCCCACATACCAAGTTTAGTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGACATTCACCCTTTTTCGCCGGTTACAGACCGCAATTCTATATGAGGACGACCGATGTCACTGGTAAGGTGTCTTCGATTATGAACGACAAGGATGAGGAGTCGAAAATGGTTATGCCTGGAGACCGAGTGAAAATGGTTGTGGAACTGATTATGCCGGTGGCTTGTGAACAAGGAATGAGGTTTGCTATCAGAGAAGGTGGTAAGACCGTTGGTGCTGGTGTGATTCAATCAATAATCGAGTGA

mRNA sequence

ATGGCGGCCATTTCCTTAGCTTCCGCTTCCACTTCCTCTAAGCTTGTTTTCCCTCACCCTTCTTCTTCTTCTTCTTCCTCCTCCCCTTCTTCTTCCCTTCTCGTCAAACCCTCCTCTGTTACCAACCTTTCTTCCTCTTTCTTGAACCCTTCTTCTATTCGCCCTCTCTCCCTTTCTTCCCCCTCTGTAAACCGTCCTCGTTCCTTCACAATTCGAGCCGCCCGTGGCAAATTCGAGAGGAAGAAACCCCATGTCAATATCGGCACAATTGGCCATGTCGACCATGGTAAAACCACTCTTACCGCCGCTTTGACCATGGCTTTGAGCAAAGCCCCAAAGAAATACGACGAAATTGACGCTGCCCCAGAAGAGCGAGCTCGTGGTATTACAATTAATACAGCTACCGTCGAGTACGAGACTGAGAGCCGACATTACGCTCATGTTGATTGTCCTGGCCATGCTGATTATGTCAAGAACATGATTACTGGTGCTGCTCAAATGGATGGAGCAATTTTGGTGGTTTCCGGTGCTGATGGCCCAATGCCACAGACGAAGGAGCATATTTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTCAACAAGAAGGATCAAGTTGATGATGAGGAGCTTCTGCAGCTTGTGGAATTGGAGATGCGTGAGTTGCTTTCTTCCTATGAATTCCCAGGTGATGATGTTCCAATTATTGCTGGTTCTGCTTTGTTAGCTTTGGAAGCTTTAATGGCTAATAACAATATAGCTAGAGGAGAAAATGAATGGGTGGATAAAATTTTTGAACTTATGGATGCTGTTGATAGCTATATACCAATACCTGAAAGACAAACAGATCTTCCATTTTTGCTTGCTGTTGAAGATGTGTTTTCTATTACTGGTCGTGGTACTGTGGCTACAGGGCGTGTTGAAAGGGGAACTGTTAGAGTGGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGAAACACAACAGTAACAGGAGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGGGATAATGTTGGTTTGTTGCTTAGAGGTGTTCAGAAGGCTGATATCCAAAGAGGGATGGTTTTAGCCAAGCCTGGCACTATCACCCCACATACCAAGTTTAGTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGACATTCACCCTTTTTCGCCGGTTACAGACCGCAATTCTATATGAGGACGACCGATGTCACTGGTAAGGTGTCTTCGATTATGAACGACAAGGATGAGGAGTCGAAAATGGTTATGCCTGGAGACCGAGTGAAAATGGTTGTGGAACTGATTATGCCGGTGGCTTGTGAACAAGGAATGAGGTTTGCTATCAGAGAAGGTGGTAAGACCGTTGGTGCTGGTGTGATTCAATCAATAATCGAGTGA

Coding sequence (CDS)

ATGGCGGCCATTTCCTTAGCTTCCGCTTCCACTTCCTCTAAGCTTGTTTTCCCTCACCCTTCTTCTTCTTCTTCTTCCTCCTCCCCTTCTTCTTCCCTTCTCGTCAAACCCTCCTCTGTTACCAACCTTTCTTCCTCTTTCTTGAACCCTTCTTCTATTCGCCCTCTCTCCCTTTCTTCCCCCTCTGTAAACCGTCCTCGTTCCTTCACAATTCGAGCCGCCCGTGGCAAATTCGAGAGGAAGAAACCCCATGTCAATATCGGCACAATTGGCCATGTCGACCATGGTAAAACCACTCTTACCGCCGCTTTGACCATGGCTTTGAGCAAAGCCCCAAAGAAATACGACGAAATTGACGCTGCCCCAGAAGAGCGAGCTCGTGGTATTACAATTAATACAGCTACCGTCGAGTACGAGACTGAGAGCCGACATTACGCTCATGTTGATTGTCCTGGCCATGCTGATTATGTCAAGAACATGATTACTGGTGCTGCTCAAATGGATGGAGCAATTTTGGTGGTTTCCGGTGCTGATGGCCCAATGCCACAGACGAAGGAGCATATTTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTCAACAAGAAGGATCAAGTTGATGATGAGGAGCTTCTGCAGCTTGTGGAATTGGAGATGCGTGAGTTGCTTTCTTCCTATGAATTCCCAGGTGATGATGTTCCAATTATTGCTGGTTCTGCTTTGTTAGCTTTGGAAGCTTTAATGGCTAATAACAATATAGCTAGAGGAGAAAATGAATGGGTGGATAAAATTTTTGAACTTATGGATGCTGTTGATAGCTATATACCAATACCTGAAAGACAAACAGATCTTCCATTTTTGCTTGCTGTTGAAGATGTGTTTTCTATTACTGGTCGTGGTACTGTGGCTACAGGGCGTGTTGAAAGGGGAACTGTTAGAGTGGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGAAACACAACAGTAACAGGAGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGGGATAATGTTGGTTTGTTGCTTAGAGGTGTTCAGAAGGCTGATATCCAAAGAGGGATGGTTTTAGCCAAGCCTGGCACTATCACCCCACATACCAAGTTTAGTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGACATTCACCCTTTTTCGCCGGTTACAGACCGCAATTCTATATGAGGACGACCGATGTCACTGGTAAGGTGTCTTCGATTATGAACGACAAGGATGAGGAGTCGAAAATGGTTATGCCTGGAGACCGAGTGAAAATGGTTGTGGAACTGATTATGCCGGTGGCTTGTGAACAAGGAATGAGGTTTGCTATCAGAGAAGGTGGTAAGACCGTTGGTGCTGGTGTGATTCAATCAATAATCGAGTGA

Protein sequence

MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRPLSLSSPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE

Homology

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BLAST of Lsi06G015920 vs. ExPASy Swiss-Prot
Match: Q43467 (Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFA PE=3 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 4.4e-224
Identity = 408/480 (85.00%), Postives = 445/480 (92.71%), Query Frame = 0


Query: 4   ISLASASTSSKLV-FPHPSSSSS-SSSPSSSLLVKPSSVTNLSSSFLNPSSIRPLSLSSP 63
           ++++SA+ SSKL+  PH SSSSS +S+P  S       +T LSSSFL+P+++   + SS 
Sbjct: 1   MAVSSATASSKLILLPHASSSSSLNSTPFRSSTTNTHKLTPLSSSFLHPTTVLRRTPSST 60

Query: 64  SVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKYDE 123
           +  R R+FT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + APKKYDE
Sbjct: 61  TTPR-RTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDE 120

Query: 124 IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 183
           IDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA
Sbjct: 121 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 180

Query: 184 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 243
           DGPMPQTKEHI+LAKQVGVPNMVVFLNK+DQVDDEELLQLVE+E+R+LLSSYEFPGDD P
Sbjct: 181 DGPMPQTKEHIILAKQVGVPNMVVFLNKQDQVDDEELLQLVEIEVRDLLSSYEFPGDDTP 240

Query: 244 IIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF 303
           I++GSALLALEALMAN  I RG+NEWVDKIF+LMD VD+YIPIP+RQTDLPFLLAVEDVF
Sbjct: 241 IVSGSALLALEALMANPAIKRGDNEWVDKIFQLMDEVDNYIPIPQRQTDLPFLLAVEDVF 300

Query: 304 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 363
           SITGRGTVATGRVERGT++VGETVD+VGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL
Sbjct: 301 SITGRGTVATGRVERGTIKVGETVDLVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 360

Query: 364 RGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 423
           RGVQK DIQRGMVLAKPGTITPHTKFSA+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT
Sbjct: 361 RGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 420

Query: 424 GKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478
           GKV+SIMNDKDEES MV+PGDRVKMVVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 GKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479

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BLAST of Lsi06G015920 vs. ExPASy Swiss-Prot
Match: P46280 (Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFB1 PE=3 SV=1)

HSP 1 Score: 773.1 bits (1995), Expect = 1.8e-222
Identity = 403/479 (84.13%), Postives = 440/479 (91.86%), Query Frame = 0


Query: 3   AISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRPLSLSSPS 62
           AIS A+A+TS     PH   S S SS    L     S T+LSSSF++P++I  L+ ++ +
Sbjct: 2   AISWAAATTSKLAYPPHVHFSPSPSSNYLFLKTHKPSATHLSSSFIHPTTILHLAAANTT 61

Query: 63  VNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKYDEI 122
             R RSFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + APKKYDEI
Sbjct: 62  TRR-RSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEI 121

Query: 123 DAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD 182
           DAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD
Sbjct: 122 DAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD 181

Query: 183 GPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPI 242
           GPMPQTKEHILLAKQVGVPN+VVFLNK+DQVDDEELLQLVELE+RELLS YEFPGDDVPI
Sbjct: 182 GPMPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLSKYEFPGDDVPI 241

Query: 243 IAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFS 302
           I+GSALL+LEALMAN +I RGEN+WVDKI+ELM+AVD YIPIP+RQT+LPFLLA+EDVF+
Sbjct: 242 ISGSALLSLEALMANPSIKRGENQWVDKIYELMEAVDDYIPIPQRQTELPFLLAIEDVFT 301

Query: 303 ITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLR 362
           ITGRGTVATGRVERGT+RVGETVDIVG+++TRNTTVTGVEMFQKILDEALAGDNVGLLLR
Sbjct: 302 ITGRGTVATGRVERGTIRVGETVDIVGVKDTRNTTVTGVEMFQKILDEALAGDNVGLLLR 361

Query: 363 GVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG 422
           G+QK DIQRGMVLAKPGTITPHTKFSA+VYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG
Sbjct: 362 GIQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTG 421

Query: 423 KVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478
           KV+ IMNDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 422 KVTEIMNDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479

[Close]

BLAST of Lsi06G015920 vs. ExPASy Swiss-Prot
Match: Q43364 (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFB PE=2 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 6.6e-220
Identity = 403/485 (83.09%), Postives = 442/485 (91.13%), Query Frame = 0


Query: 1   MAAISLAS--ASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVTNLSSSFL-NPSSIRPLS 60
           MA+IS AS  A+ S+KL +P+  SSSSSSS ++++    SS   LSSSF   PS++   S
Sbjct: 1   MASISAASATATASTKLAYPYSPSSSSSSSNTAAVFPSNSSKLILSSSFTPTPSTLFLHS 60

Query: 61  -LSSPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAP 120
             ++PS   PR FT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + AP
Sbjct: 61  PTTTPSTTHPRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAP 120

Query: 121 KKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAIL 180
           KKYDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAIL
Sbjct: 121 KKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAIL 180

Query: 181 VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFP 240
           VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELLSSYEFP
Sbjct: 181 VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLELVELEVRELLSSYEFP 240

Query: 241 GDDVPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLA 300
           GD++PII+GSALLALEALMAN +I RGEN+WVDKI++LMD VD YIPIP+RQT+LPFL+A
Sbjct: 241 GDEIPIISGSALLALEALMANPSIKRGENQWVDKIYQLMDNVDEYIPIPQRQTELPFLMA 300

Query: 301 VEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDN 360
           +EDVFSITGRGTVATGRVERGTV+VGE VDIVGL++TRNTTVTGVEMFQKILDEA+AGDN
Sbjct: 301 IEDVFSITGRGTVATGRVERGTVKVGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDN 360

Query: 361 VGLLLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMR 420
           VGLLLRG+QK DIQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFFAGYRPQFYMR
Sbjct: 361 VGLLLRGIQKIDIQRGMVLAKPGTITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMR 420

Query: 421 TTDVTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVI 478
           TTDVTGKV+ IM+DK EESKMVMPGDRV MVVELIMPVACEQGMRFAIREGGKTVGAGVI
Sbjct: 421 TTDVTGKVTVIMSDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVI 480

[Close]

BLAST of Lsi06G015920 vs. ExPASy Swiss-Prot
Match: Q40450 (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFA PE=2 SV=2)

HSP 1 Score: 759.6 bits (1960), Expect = 2.1e-218
Identity = 399/482 (82.78%), Postives = 437/482 (90.66%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVT-NLSSSFLNPSSIRPLSLS 60
           MA+IS A+A++S+KLV  + ++    SS   S L+  SS T N S+ FL+     P + S
Sbjct: 1   MASISAATATSSTKLVSSNSTNPLLPSSTKPSKLILSSSFTPNCSTLFLH----SPATPS 60

Query: 61  SPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKY 120
           S + +R R FT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + APKKY
Sbjct: 61  STATHRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKY 120

Query: 121 DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180
           DEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILV S
Sbjct: 121 DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCS 180

Query: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDD 240
           GADGPMPQTKEHILLAKQVGVPNMVVFLNK+DQVDDEELLQLVELE+RELLSSYEFPGDD
Sbjct: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDD 240

Query: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300
           +PII+GSALLALEALMAN +I RGEN+WVDKI+ELMDAVDSYIPIP RQT+LPFL+A+ED
Sbjct: 241 IPIISGSALLALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELPFLMAIED 300

Query: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360
           VFSITGRGTVATGRVERGTVR+G+TVDIVGL++TR+TTVTGVEMFQKILDEA+AGDNVGL
Sbjct: 301 VFSITGRGTVATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGL 360

Query: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420
           LLRG+QK DIQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFF+GYRPQFYMRTTD
Sbjct: 361 LLRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTD 420

Query: 421 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 478
           VTGKV+SI  DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ I
Sbjct: 421 VTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKI 478

[Close]

BLAST of Lsi06G015920 vs. ExPASy Swiss-Prot
Match: P68158 (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum OX=4097 GN=TUFA PE=3 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 2.1e-218
Identity = 399/482 (82.78%), Postives = 437/482 (90.66%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVT-NLSSSFLNPSSIRPLSLS 60
           MA+IS A+A++S+KLV  + ++    SS   S L+  SS T N S+ FL+     P + S
Sbjct: 1   MASISAATATSSTKLVSSNSTNPLLPSSTKPSKLILSSSFTPNCSTLFLH----SPATPS 60

Query: 61  SPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKY 120
           S + +R R FT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + APKKY
Sbjct: 61  STATHRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKY 120

Query: 121 DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180
           DEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILV S
Sbjct: 121 DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCS 180

Query: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDD 240
           GADGPMPQTKEHILLAKQVGVPNMVVFLNK+DQVDDEELLQLVELE+RELLSSYEFPGDD
Sbjct: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDD 240

Query: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300
           +PII+GSALLALEALMAN +I RGEN+WVDKI+ELMDAVDSYIPIP RQT+LPFL+A+ED
Sbjct: 241 IPIISGSALLALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELPFLMAIED 300

Query: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360
           VFSITGRGTVATGRVERGTVR+G+TVDIVGL++TR+TTVTGVEMFQKILDEA+AGDNVGL
Sbjct: 301 VFSITGRGTVATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGL 360

Query: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420
           LLRG+QK DIQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFF+GYRPQFYMRTTD
Sbjct: 361 LLRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTD 420

Query: 421 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 478
           VTGKV+SI  DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ I
Sbjct: 421 VTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKI 478

[Close]

BLAST of Lsi06G015920 vs. ExPASy TrEMBL
Match: A0A5A7URR7 (Elongation factor Tu OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001070 PE=3 SV=1)

HSP 1 Score: 879.8 bits (2272), Expect = 5.2e-252
Identity = 467/482 (96.89%), Postives = 468/482 (97.10%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSS-----SSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRP 60
           MAAISLAS STSSKLVFPHPSSS     SSSSSPSSSL  KPSS  NLSSSFLN SSIRP
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSPSPSPSSSSSPSSSLFSKPSS--NLSSSFLNSSSIRP 60

Query: 61  LSLSSPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY 120
            S SSPSVNRPRS TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY
Sbjct: 61  FSFSSPSVNRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY 120

Query: 121 DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180
           DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS
Sbjct: 121 DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180

Query: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDD 240
           GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDD
Sbjct: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDD 240

Query: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300
           VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED
Sbjct: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300

Query: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360
           VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL
Sbjct: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360

Query: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420
           LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD
Sbjct: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420

Query: 421 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 478
           VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI
Sbjct: 421 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 480

[Close]

BLAST of Lsi06G015920 vs. ExPASy TrEMBL
Match: A0A1S3CLM5 (Elongation factor Tu OS=Cucumis melo OX=3656 GN=LOC103502373 PE=3 SV=1)

HSP 1 Score: 879.8 bits (2272), Expect = 5.2e-252
Identity = 467/482 (96.89%), Postives = 468/482 (97.10%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSS-----SSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRP 60
           MAAISLAS STSSKLVFPHPSSS     SSSSSPSSSL  KPSS  NLSSSFLN SSIRP
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSPSPSPSSSSSPSSSLFSKPSS--NLSSSFLNSSSIRP 60

Query: 61  LSLSSPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY 120
            S SSPSVNRPRS TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY
Sbjct: 61  FSFSSPSVNRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY 120

Query: 121 DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180
           DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS
Sbjct: 121 DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180

Query: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDD 240
           GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDD
Sbjct: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDD 240

Query: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300
           VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED
Sbjct: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300

Query: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360
           VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL
Sbjct: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360

Query: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420
           LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD
Sbjct: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420

Query: 421 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 478
           VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI
Sbjct: 421 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 480

[Close]

BLAST of Lsi06G015920 vs. ExPASy TrEMBL
Match: A0A6J1C0N2 (Elongation factor Tu OS=Momordica charantia OX=3673 GN=LOC111007263 PE=3 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 1.6e-245
Identity = 453/480 (94.38%), Postives = 463/480 (96.46%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRPLSLSS 60
           MAAISLASASTS+KLVFPH  +S S SSP +SL  KPSS+  LSSSFLNPSSIRPL+ SS
Sbjct: 1   MAAISLASASTSTKLVFPH--ASPSPSSPPASLFAKPSSIPKLSSSFLNPSSIRPLTFSS 60

Query: 61  PS---VNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE 120
            S   V RPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE
Sbjct: 61  GSSATVARPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE 120

Query: 121 IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 180
           IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA
Sbjct: 121 IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 180

Query: 181 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 240
           DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP
Sbjct: 181 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 240

Query: 241 IIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF 300
           IIAGSALLALEALMAN +IARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF
Sbjct: 241 IIAGSALLALEALMANQSIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF 300

Query: 301 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 360
           SITGRGTVATGRVERGT+RVG+TVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL
Sbjct: 301 SITGRGTVATGRVERGTIRVGDTVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 360

Query: 361 RGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 420
           RGVQKADIQRGMVL+KPGTITPHTKF AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT
Sbjct: 361 RGVQKADIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 420

Query: 421 GKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478
           GKV+SIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 GKVTSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478

[Close]

BLAST of Lsi06G015920 vs. ExPASy TrEMBL
Match: A0A6J1E4U0 (Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111429936 PE=3 SV=1)

HSP 1 Score: 855.1 bits (2208), Expect = 1.4e-244
Identity = 454/481 (94.39%), Postives = 463/481 (96.26%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVTN----LSSSFLNPSSIRPL 60
           MAAISLASASTSS L+F H +S+S SSSPSSSL VKPSS ++    LSSSFLNPSSIRPL
Sbjct: 1   MAAISLASASTSSNLLFLH-ASASPSSSPSSSLFVKPSSSSSSAIKLSSSFLNPSSIRPL 60

Query: 61  SLSSPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYD 120
           + SSP+V  PRS TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYD
Sbjct: 61  TFSSPAVKPPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYD 120

Query: 121 EIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG 180
           EIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG
Sbjct: 121 EIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG 180

Query: 181 ADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDV 240
           ADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDV
Sbjct: 181 ADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDV 240

Query: 241 PIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDV 300
           PIIAGSALLALEALMAN  I RGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDV
Sbjct: 241 PIIAGSALLALEALMANPGIVRGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDV 300

Query: 301 FSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLL 360
           FSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLL
Sbjct: 301 FSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLL 360

Query: 361 LRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDV 420
           LRGVQKADIQRGMVLAKPGTITPHTKF AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDV
Sbjct: 361 LRGVQKADIQRGMVLAKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDV 420

Query: 421 TGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 478
           TGKV+SIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII
Sbjct: 421 TGKVTSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 480

[Close]

BLAST of Lsi06G015920 vs. ExPASy TrEMBL
Match: A0A6J1JDL1 (Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111484851 PE=3 SV=1)

HSP 1 Score: 853.2 bits (2203), Expect = 5.2e-244
Identity = 453/479 (94.57%), Postives = 460/479 (96.03%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKP--SSVTNLSSSFLNPSSIRPLSL 60
           MAAISLASASTSS L+F H +S+S SSSPSSSL  KP  SS   LSSSFLNPSSIRPL+ 
Sbjct: 1   MAAISLASASTSSNLLFLH-ASASPSSSPSSSLFAKPSSSSAIKLSSSFLNPSSIRPLTF 60

Query: 61  SSPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEI 120
           SS +VN PRS TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEI
Sbjct: 61  SSSAVNPPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEI 120

Query: 121 DAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD 180
           DAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD
Sbjct: 121 DAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD 180

Query: 181 GPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPI 240
           GPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVPI
Sbjct: 181 GPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPI 240

Query: 241 IAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFS 300
           IAGSALLALEALMAN  I RGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFS
Sbjct: 241 IAGSALLALEALMANPGIVRGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFS 300

Query: 301 ITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLR 360
           ITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLR
Sbjct: 301 ITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLR 360

Query: 361 GVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG 420
           GVQKADIQRGMVLAKPGTITPHTKF AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG
Sbjct: 361 GVQKADIQRGMVLAKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG 420

Query: 421 KVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478
           KV+SIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 KVTSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478

[Close]

BLAST of Lsi06G015920 vs. NCBI nr
Match: XP_038879216.1 (elongation factor Tu, chloroplastic [Benincasa hispida])

HSP 1 Score: 879.8 bits (2272), Expect = 1.1e-251
Identity = 464/477 (97.27%), Postives = 467/477 (97.90%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRPLSLSS 60
           MAAISLASASTSSKL+FPHPSSSSSSSS SSS    PSS   LSSSFLNPSSIRPLS SS
Sbjct: 1   MAAISLASASTSSKLLFPHPSSSSSSSSSSSS--SPPSSSLKLSSSFLNPSSIRPLSFSS 60

Query: 61  PSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDA 120
           PS+NRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSK PKKYDEIDA
Sbjct: 61  PSLNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKVPKKYDEIDA 120

Query: 121 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 180
           APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP
Sbjct: 121 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 180

Query: 181 MPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIIA 240
           MPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIIA
Sbjct: 181 MPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIIA 240

Query: 241 GSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSIT 300
           GSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSIT
Sbjct: 241 GSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSIT 300

Query: 301 GRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGV 360
           GRGTVATGRVERGTV+VGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGV
Sbjct: 301 GRGTVATGRVERGTVKVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGV 360

Query: 361 QKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV 420
           QKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV
Sbjct: 361 QKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV 420

Query: 421 SSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478
           SSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 SSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 475

[Close]

BLAST of Lsi06G015920 vs. NCBI nr
Match: XP_008464512.1 (PREDICTED: elongation factor Tu, chloroplastic [Cucumis melo] >KAA0057820.1 elongation factor Tu [Cucumis melo var. makuwa] >TYJ98504.1 elongation factor Tu [Cucumis melo var. makuwa])

HSP 1 Score: 879.8 bits (2272), Expect = 1.1e-251
Identity = 467/482 (96.89%), Postives = 468/482 (97.10%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSS-----SSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRP 60
           MAAISLAS STSSKLVFPHPSSS     SSSSSPSSSL  KPSS  NLSSSFLN SSIRP
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSPSPSPSSSSSPSSSLFSKPSS--NLSSSFLNSSSIRP 60

Query: 61  LSLSSPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY 120
            S SSPSVNRPRS TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY
Sbjct: 61  FSFSSPSVNRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY 120

Query: 121 DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180
           DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS
Sbjct: 121 DEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180

Query: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDD 240
           GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDD
Sbjct: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDD 240

Query: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300
           VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED
Sbjct: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300

Query: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360
           VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL
Sbjct: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360

Query: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420
           LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD
Sbjct: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420

Query: 421 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 478
           VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI
Sbjct: 421 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 480

[Close]

BLAST of Lsi06G015920 vs. NCBI nr
Match: XP_004138088.2 (elongation factor Tu, chloroplastic [Cucumis sativus] >KAE8652395.1 hypothetical protein Csa_014228 [Cucumis sativus])

HSP 1 Score: 872.5 bits (2253), Expect = 1.7e-249
Identity = 464/484 (95.87%), Postives = 468/484 (96.69%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPH-------PSSSSSSSSPSSSLLVKPSSVTNLSSSFLNPSSI 60
           MAAISLAS STSSKLVFPH       PSSSSSSSS SS+L  KPSS  NLSSSFLN SSI
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSS--NLSSSFLNSSSI 60

Query: 61  RPLSLSSPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPK 120
           RPLS SSPSV+RPRS TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPK
Sbjct: 61  RPLSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPK 120

Query: 121 KYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILV 180
           KYDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILV
Sbjct: 121 KYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILV 180

Query: 181 VSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPG 240
           VSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPG
Sbjct: 181 VSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPG 240

Query: 241 DDVPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAV 300
           DDVPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAV
Sbjct: 241 DDVPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAV 300

Query: 301 EDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNV 360
           EDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNV
Sbjct: 301 EDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNV 360

Query: 361 GLLLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRT 420
           GLLLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRT
Sbjct: 361 GLLLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRT 420

Query: 421 TDVTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQ 478
           TDVTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQ
Sbjct: 421 TDVTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQ 480

[Close]

BLAST of Lsi06G015920 vs. NCBI nr
Match: XP_022135255.1 (elongation factor Tu, chloroplastic [Momordica charantia])

HSP 1 Score: 858.2 bits (2216), Expect = 3.3e-245
Identity = 453/480 (94.38%), Postives = 463/480 (96.46%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRPLSLSS 60
           MAAISLASASTS+KLVFPH  +S S SSP +SL  KPSS+  LSSSFLNPSSIRPL+ SS
Sbjct: 1   MAAISLASASTSTKLVFPH--ASPSPSSPPASLFAKPSSIPKLSSSFLNPSSIRPLTFSS 60

Query: 61  PS---VNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE 120
            S   V RPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE
Sbjct: 61  GSSATVARPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE 120

Query: 121 IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 180
           IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA
Sbjct: 121 IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 180

Query: 181 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 240
           DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP
Sbjct: 181 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVP 240

Query: 241 IIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF 300
           IIAGSALLALEALMAN +IARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF
Sbjct: 241 IIAGSALLALEALMANQSIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF 300

Query: 301 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 360
           SITGRGTVATGRVERGT+RVG+TVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL
Sbjct: 301 SITGRGTVATGRVERGTIRVGDTVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 360

Query: 361 RGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 420
           RGVQKADIQRGMVL+KPGTITPHTKF AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT
Sbjct: 361 RGVQKADIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 420

Query: 421 GKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478
           GKV+SIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 GKVTSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478

[Close]

BLAST of Lsi06G015920 vs. NCBI nr
Match: KAG6589415.1 (Elongation factor Tu, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 858.2 bits (2216), Expect = 3.3e-245
Identity = 455/478 (95.19%), Postives = 462/478 (96.65%), Query Frame = 0


Query: 1   MAAISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKP-SSVTNLSSSFLNPSSIRPLSLS 60
           MAAISLASASTSS L+F H +S+S SSSPSSSL VKP SS   LSSSFLNPSSIRPL+ S
Sbjct: 1   MAAISLASASTSSNLLFLH-ASASPSSSPSSSLFVKPSSSAIKLSSSFLNPSSIRPLTFS 60

Query: 61  SPSVNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID 120
           SP+VN PRS TIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID
Sbjct: 61  SPAVNPPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID 120

Query: 121 AAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 180
           AAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG
Sbjct: 121 AAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 180

Query: 181 PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPII 240
           PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELL+LVELEMRELLSSYEFPGDDVPII
Sbjct: 181 PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPII 240

Query: 241 AGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSI 300
           AGSALLALEALMAN  I RGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSI
Sbjct: 241 AGSALLALEALMANPGIVRGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSI 300

Query: 301 TGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRG 360
           TGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRG
Sbjct: 301 TGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRG 360

Query: 361 VQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGK 420
           VQKADIQRGMVLAKPGTITPHTKF AVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGK
Sbjct: 361 VQKADIQRGMVLAKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGK 420

Query: 421 VSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478
           V+SIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 421 VTSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 477

[Close]

BLAST of Lsi06G015920 vs. TAIR 10
Match: AT4G20360.1 (RAB GTPase homolog E1B )

HSP 1 Score: 738.0 bits (1904), Expect = 4.7e-213
Identity = 392/479 (81.84%), Postives = 428/479 (89.35%), Query Frame = 0


Query: 3   AISLASASTSSKLVFPHPSSSSSSSSPSSSLLVKPSSVTNLSSSFLNPSSIRPLSLSSPS 62
           AIS  +A +SS  +    SS S S  P+ S   K  ++T LSSSFL   S   L+ +S S
Sbjct: 2   AISAPAACSSSSRILCSYSSPSPSLCPAISTSGKLKTLT-LSSSFLPSYS---LTTTSAS 61

Query: 63  VNRPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKYDEI 122
            +  RSFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    S   KKYDEI
Sbjct: 62  QSTRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEI 121

Query: 123 DAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD 182
           DAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD
Sbjct: 122 DAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD 181

Query: 183 GPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPI 242
           GPMPQTKEHILLAKQVGVP+MVVFLNK+DQVDD ELL+LVELE+RELLSSYEF GDD+PI
Sbjct: 182 GPMPQTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYEFNGDDIPI 241

Query: 243 IAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFS 302
           I+GSALLA+E L  N  + RG+N+WVDKI+ELMDAVD YIPIP+RQT+LPFLLAVEDVFS
Sbjct: 242 ISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFS 301

Query: 303 ITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLR 362
           ITGRGTVATGRVERGTV+VGETVD+VGLRETR+ TVTGVEMFQKILDEALAGDNVGLLLR
Sbjct: 302 ITGRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLR 361

Query: 363 GVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG 422
           G+QKADIQRGMVLAKPG+ITPHTKF A++YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG
Sbjct: 362 GIQKADIQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG 421

Query: 423 KVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478
           KV+ IMNDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVI +I+E
Sbjct: 422 KVTKIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476

[Close]

BLAST of Lsi06G015920 vs. TAIR 10
Match: AT4G02930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 518.5 bits (1334), Expect = 5.8e-147
Identity = 286/462 (61.90%), Postives = 338/462 (73.16%), Query Frame = 0


Query: 28  SPSSSLLVKPSSV------TNLSSSFLNPSSIRPLSLSSPSVNRPRSFTIRAARGKFERK 87
           +PSS  LV  SS        +++SS+    SI    LSS +      +   A    F R 
Sbjct: 8   NPSSKRLVPFSSQIYSRCGASVTSSYSISHSIGGDDLSSSTFGTSSFWRSMAT---FTRN 67

Query: 88  KPHVNIGTIGHVDHGKTTLTAALTMALSKAPK----KYDEIDAAPEERARGITINTATVE 147
           KPHVN+GTIGHVDHGKTTLTAA+T  L++  K     +DEID APEE+ RGITI TA VE
Sbjct: 68  KPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVE 127

Query: 148 YETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVP 207
           YET  RHYAHVDCPGHADYVKNMITGAAQMDG ILVVSG DGPMPQTKEHILLA+QVGVP
Sbjct: 128 YETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQVGVP 187

Query: 208 NMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPIIAGSALLALEALMANNNIA 267
           ++V FLNK D VDD ELL+LVE+E+RELLS Y+FPGDD+PII GSAL AL+    N+ I 
Sbjct: 188 SLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQG--TNDEIG 247

Query: 268 RGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGRVERGTVRV 327
           R        I +LMDAVD YIP P R  D PFL+ +EDVFSI GRGTVATGR+E+G ++V
Sbjct: 248 R------QAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKV 307

Query: 328 GETVDIVGLRE---TRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGMVLAKP 387
           GE V+I+GLRE      +TVTGVEMF+KILD   AGDNVGLLLRG+++ DIQRGMV+AKP
Sbjct: 308 GEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVIAKP 367

Query: 388 GTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDEESKMV 447
           G+   + KF A +YVL K+EGGRH+ FF+ YRPQFY+RT D+TGKV     +  E  KMV
Sbjct: 368 GSCKTYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKV-----ELPENVKMV 427

Query: 448 MPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 477
           MPGD V  V ELIMPV  E G RFA+REGG+TVGAGV+  ++
Sbjct: 428 MPGDNVTAVFELIMPVPLETGQRFALREGGRTVGAGVVSKVM 453

[Close]

BLAST of Lsi06G015920 vs. TAIR 10
Match: AT1G07920.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-40
Identity = 137/442 (31.00%), Postives = 199/442 (45.02%), Query Frame = 0


Query: 80  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE-------------------IDA 139
           ++K H+NI  IGHVD GK+T T  L   L    K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 140 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 199
              ER RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 200 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DEELLQLVELEMRELLSSYE 259
                    QT+EH LLA  +GV  M+   NK D       +     +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 260 FPGDDVPIIAGSALLALEALMANNNIARGEN-EWVDKIFELMDAVDSYIPIPERQTDLPF 319
           +  D +P +       +     +N I R  N +W  K   L++A+D  I  P+R +D P 
Sbjct: 183 YNPDKIPFV------PISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPSDKPL 242

Query: 320 LLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALA 379
            L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL 
Sbjct: 243 RLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEALP 302

Query: 380 GDNVGLLLRGVQKADIQRGMVL--AKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRP 439
           GDNVG  ++ V   D++RG V   +K         F++ V ++             GY P
Sbjct: 303 GDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYAP 362

Query: 440 QFYMRTTDVTGKVSSIMNDKD--------EESKMVMPGDRVKMVVELIMPVACEQGM--- 476
                T+ +  K S I+   D        +E K +  GD   + +    P+  E      
Sbjct: 363 VLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYP 422

[Close]

BLAST of Lsi06G015920 vs. TAIR 10
Match: AT1G07930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-40
Identity = 137/442 (31.00%), Postives = 199/442 (45.02%), Query Frame = 0


Query: 80  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE-------------------IDA 139
           ++K H+NI  IGHVD GK+T T  L   L    K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 140 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 199
              ER RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 200 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DEELLQLVELEMRELLSSYE 259
                    QT+EH LLA  +GV  M+   NK D       +     +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 260 FPGDDVPIIAGSALLALEALMANNNIARGEN-EWVDKIFELMDAVDSYIPIPERQTDLPF 319
           +  D +P +       +     +N I R  N +W  K   L++A+D  I  P+R +D P 
Sbjct: 183 YNPDKIPFV------PISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPSDKPL 242

Query: 320 LLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALA 379
            L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL 
Sbjct: 243 RLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEALP 302

Query: 380 GDNVGLLLRGVQKADIQRGMVL--AKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRP 439
           GDNVG  ++ V   D++RG V   +K         F++ V ++             GY P
Sbjct: 303 GDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYAP 362

Query: 440 QFYMRTTDVTGKVSSIMNDKD--------EESKMVMPGDRVKMVVELIMPVACEQGM--- 476
                T+ +  K S I+   D        +E K +  GD   + +    P+  E      
Sbjct: 363 VLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYP 422

[Close]

BLAST of Lsi06G015920 vs. TAIR 10
Match: AT1G07940.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-40
Identity = 137/442 (31.00%), Postives = 199/442 (45.02%), Query Frame = 0


Query: 80  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE-------------------IDA 139
           ++K H+NI  IGHVD GK+T T  L   L    K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 140 APEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 199
              ER RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 200 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DEELLQLVELEMRELLSSYE 259
                    QT+EH LLA  +GV  M+   NK D       +     +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 260 FPGDDVPIIAGSALLALEALMANNNIARGEN-EWVDKIFELMDAVDSYIPIPERQTDLPF 319
           +  D +P +       +     +N I R  N +W  K   L++A+D  I  P+R +D P 
Sbjct: 183 YNPDKIPFV------PISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPSDKPL 242

Query: 320 LLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALA 379
            L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL 
Sbjct: 243 RLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEALP 302

Query: 380 GDNVGLLLRGVQKADIQRGMVL--AKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRP 439
           GDNVG  ++ V   D++RG V   +K         F++ V ++             GY P
Sbjct: 303 GDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYAP 362

Query: 440 QFYMRTTDVTGKVSSIMNDKD--------EESKMVMPGDRVKMVVELIMPVACEQGM--- 476
                T+ +  K S I+   D        +E K +  GD   + +    P+  E      
Sbjct: 363 VLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYP 422

The following BLAST results are available for this feature:

BLAST of Lsi06G015920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43467	4.4e-224	85.00	Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFA PE=3 SV=1	[more]
P46280	1.8e-222	84.13	Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFB1 PE=3 SV=1	[more]
Q43364	6.6e-220	83.09	Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFB PE=...	[more]
Q40450	2.1e-218	82.78	Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFA PE=...	[more]
P68158	2.1e-218	82.78	Elongation factor Tu, chloroplastic OS=Nicotiana tabacum OX=4097 GN=TUFA PE=3 SV...	[more]

BLAST of Lsi06G015920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7URR7	5.2e-252	96.89	Elongation factor Tu OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350...	[more]
A0A1S3CLM5	5.2e-252	96.89	Elongation factor Tu OS=Cucumis melo OX=3656 GN=LOC103502373 PE=3 SV=1	[more]
A0A6J1C0N2	1.6e-245	94.38	Elongation factor Tu OS=Momordica charantia OX=3673 GN=LOC111007263 PE=3 SV=1	[more]
A0A6J1E4U0	1.4e-244	94.39	Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111429936 PE=3 SV=1	[more]
A0A6J1JDL1	5.2e-244	94.57	Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111484851 PE=3 SV=1	[more]

BLAST of Lsi06G015920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879216.1	1.1e-251	97.27	elongation factor Tu, chloroplastic [Benincasa hispida]	[more]
XP_008464512.1	1.1e-251	96.89	PREDICTED: elongation factor Tu, chloroplastic [Cucumis melo] >KAA0057820.1 elon...	[more]
XP_004138088.2	1.7e-249	95.87	elongation factor Tu, chloroplastic [Cucumis sativus] >KAE8652395.1 hypothetical...	[more]
XP_022135255.1	3.3e-245	94.38	elongation factor Tu, chloroplastic [Momordica charantia]	[more]
KAG6589415.1	3.3e-245	95.19	Elongation factor Tu, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Lsi06G015920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20360.1	4.7e-213	81.84	RAB GTPase homolog E1B	[more]
AT4G02930.1	5.8e-147	61.90	GTP binding Elongation factor Tu family protein	[more]
AT1G07920.1	1.6e-40	31.00	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.1	1.6e-40	31.00	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.1	1.6e-40	31.00	GTP binding Elongation factor Tu family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Translational (tr)-type GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 162..173 score: 66.17 coord: 199..208 score: 51.85 coord: 86..99 score: 76.82 coord: 126..134 score: 70.58 coord: 146..156 score: 63.79
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 82..279 e-value: 7.0E-55 score: 185.6
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 82..282 score: 59.666664
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 416..476 e-value: 4.0E-23 score: 83.0
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 284..412 e-value: 1.4E-53 score: 182.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR43721:SF21	ELONGATION FACTOR TU	coord: 25..477
None	No IPR available	PANTHER	PTHR43721	ELONGATION FACTOR TU-RELATED	coord: 25..477
None	No IPR available	CDD	cd03707	EFTU_III	coord: 378..472 e-value: 4.87917E-55 score: 176.548
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 376..475 e-value: 8.9E-40 score: 135.3
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 85..213 e-value: 1.5E-15 score: 55.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 74..281 e-value: 7.6E-72 score: 243.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 77..297
IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle	TIGRFAM	TIGR00485	TIGR00485	coord: 74..477 e-value: 5.2E-223 score: 737.8
IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle	HAMAP	MF_00118_B	EF_Tu_B	coord: 73..477 score: 58.963676
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 303..371 e-value: 2.0E-17 score: 63.3
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 119..134
IPR041709	Elongation factor Tu (EF-Tu), GTP-binding domain	CDD	cd01884	EF_Tu	coord: 83..281 e-value: 7.02937E-126 score: 362.286
IPR033720	Elongation factor Tu, domain 2	CDD	cd03697	EFTU_II	coord: 289..375 e-value: 5.0946E-51 score: 166.155
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 283..379
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 376..476

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G015920.1	Lsi06G015920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070125	mitochondrial translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity