
Lsi06G014740 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTTTCTTTTTCTTTTTCCCTCTGGAAAGTTCGTAACACTAAACAATTTGTATAAAGTTATAAACAGAGAGATGGTGAGAGTTTTTACCAAACCTCCCATTGGTTTATCCGCTAATTTGCTTTTTTATCACTTCGCTTCAGCACTTGTTTAATGATTAAGGCGCAAAGTTCCAGTCTTTCCACTCACTCTCTCTCTCTCACGCAAGAGATTTCCGAGGAATCGATTATCCAGAAGCTTCAGATCAAACGGAGAACGGGAACTGGTCTACAATCAATCGACGCTAAATGGGATCTGGAGCGGGCAGTTTTTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGTATGTTTCTCTCCTCTTGATTCTGATTATCCCAGAAGAGGGATCGTTTTTTCTTTGAGGGTCGACCTTCACTTTGCCATGGCGGACTAGAAAACTTGTTAGACTAATTCTCTGTTAACCTCATTATCATCTGTTCATGAACGATCAGATTAGCTTTTCCTGTTTAATGGAAGGAATAATCCGAACCCCCAAACTCGTGTTCTCAGAAGAAAGATTCCCAATAACCCTCATTTGCAGCCTGGGCTGGAAGGATGGGTCCTAAAATATACTGTAGCCATAATTAGAAAATATACTGAAGTCTATGAGCTTCTCTGACTAAAACGTAAAGTAAAATGGTGCAGTTTCTTGTAGTTACCTAAGCAATCTTTTATAATCCTGCCAATGAGTATCAGTTGGGGCTCTGAGAACTGACTTAGCTTGTTTACTTTAGCTCTGAGGCCTTGTCGTTGTTGGGTATTGTAGGCTGTACCCGAACTGAATCTATCATGAAATGATGAGGATCTTTAAAAGGAACACTCTATCCAGTCCCATTGGTTAAGGACTTAGTTTTGCTGTTTTATATTTCAGTTTTTGCTAGTGGATATCGAGTATATTTGGTCTAAGAAAGATAAAAGAACACTCATCACTGCAATGTACCTCAAAACCAAGAATGTAACTCTCTGGACCAAGACTTTGGAGAGTATTAGTCTGCTGAATTCTGAATTGGTACGTTGAACTGTAGCTTGTGAGAACCTAATAATTAAAGTATTAACAACATACACGTAAAGAATAATAGAATGATGAGTGGACTTAAATCTATTAAACTGGGCTCTACTATTGGATCTTGACAATGATCATGCAAGGCACTGTGTAGTTTACTCGTCACACATGTTATCTTCCTGTCAAGGGACTATGAAACCAGCTAGTTTTGTTTTGTATAAACAATTAAGTTTTATCATTTAAAAGTAAACAAGACTCCCATTGTAGAGGCTTCACAGCGGGACTAATTATTATATAAAATTAATCAACATCTGGAGTTGTTGAAACCCTTTGGTAACAAAACAAACCTTGGACCTATTAACTGTTTGTCTGATAGAGATTTATTTTAACCTCAAACAACCAGCCAAATAACCTACAAAGGACCGTCTTATTATGCATCTCCTTAATAGCTAATTTTCACTTGGGATCACCGAGTTGGGCCTTTGCACTAGAAGGCTCAATAGGTAAAGGACTGAGATATGAATTATGACATGAGATGCGTATTTTTGTTTCAAAACGCCAACTATAGTAGCCAACCAGGATAATGAATTGAATTAGGAAAAGAACCATGCTTTGGAAGTTGTATAATTATGTGATTTGAAGGATTATATCACACGTCAATGACAAAAGAGAGAAGGATGAGCCTGTTTTAGCTTGTAGGAACCACAGAAGCACGCAAACTTGCTAATGAAACCCAGCAGCAGAATCAACGGTAAAAAAGTCTGCCTTCATAGTGCATCCCTGAGGAACAACTGCAAGTTTGATGCAGAGGACTGAGCACAGGAGGAAGACCTAGACAGCCAGGGAATTCAAATTAAGAGCGTAGAATTGAATCTCATCGTGTCACCAATTCTGCACCACAATAGACAATAGTATTGTGTTCTTATGAGTTTACTGCCTTAGAAGCAGTATATAGTTGCTCACTGGTGGTTTGGCACCGGATACCTTTTCAGCTATTTACGCATGCTAAACTTGGCTCTAAAAGAACGTGAAGGTTGTTATAGCTGAGCGGGTGACGTGACAGATAGGAATAGGAAAATGGTTAGAGTATGGGAAGAAATGTAAAGCAGAAGAAAAAGTTGATTTTGGAAAAATGATTAGCTAATCATTGAAAAAATTCCAGGAAGAGAAAGAGGAGACTTTCCGTATGCCTACTTCAACTATTTTCTTTTCCACTCTATTTAACATATTTCTGATTGCTATCACCATCATGTAAGTGCACACCAGCAAATTCTTAACTTCATTCCTGGGTTTCATTTGCAGGCCTCTTGTGAGTCTTGTTTATCCTCTGTAAGTGGTTCTGCTTCTTTGTTTAACTTTCTATCCTCTTCTTGAATGATGCCTTTGGTCTCTTTGACAGTTGCATCCCAAAATTGTAGCTCAAATATTTTTTATTTGGCAGATATGCATCAGTTAGAGCCATAGAAACGAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTATATTCTATGCTCACCCTCTTTGAGCTTACATTTGCAAAAGTTCTCGAATGGTAAATTTGCTTCTTTAGTTTAGAAATCGCATTTTGCTCATTTTATCATACTGTTCTCTGGTTTTCAATTTGTGAATATAAAGGCTCTCTCAAGTCTATATGTGAGTTCTGTTTTCTCGTTACACTGATGTTAGTTAATTTGCTAGAGATTAGGACTTGGAATTTCAAATCCCATATGATTATGATAATTTGATTCTTGAATAATTTTCACATAAATGTTGTTGCTCTTTTGGTCTAATTTTGAAATGCTGGTATTATTATTTATTTTTATACTTGGTGCATCTAAAATTTGAAGCTAGTTTGTTATGTTATTTTGGCCTTGTTCTGGATGATTTTAGTATGTTCATTTTAAAGACTACCTGGCTCTGCTTGCAATGTTTTTTTACTTATCAGATGATTCAAGTATCCCTTCTGTATTTCATATTCTTTCCATTTTTGAAGTTTTCTGTCACAATCCTATAATGAAGGTGTTCTTTACACTAATAAGTTGATATTTTATTAGAACTGGTTAAAAGCCACTGATGAAGTTCCAATTTTCCCCATTAAATCTTTACATAGGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTGGTCATTCCGTACTTCAGTGGTGCTGCATATGTGTATGAGCATTTCGTGAGGCCTCTATTCGTCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAACCCGACGACATCCTAACCGCTGCAGAGAAGTACATTGCAGAAAATGGGACTGAAGACCTCCAAAATATCATCAACAGGGTATATACACTCTGACTCAGGCTCAAGTGGTTGCTTTAAAATAATTCTGAATTTGTGTTTGTATGAATGAATCAATGCAAGCGTACACAAGCAACCCATCAATTAGTTCAACCGACCTTACTGATACATATGAATGTTTTTTTTCATTTCGTTTCTGTAGGCTGATAAGGCTCAGACAAGTAGTCGTTACATGAGCTATTCTGAGAACCACGACCACGACTACAACCACGATTACTGGAACTAGTCTATATCAAGTGTTGGGAGGGCAAGAGAAGATAATCTTTTGGCTGTCAGTTGATGTTATGTGGTGGCGTTTATTTATATGTTTTATATTTGTTCATATGAAACAGTAGGTAGGTAAGTGTAAGATATTACTTCTAAGTAGTTGGTCTAATATGATTATGGCTTCTTGAGCTTTGATGTCTTGTTTGTTCTTCCCCTCACATTTGAGTCTTTACTTCACTTGGTTGGAGAATAAAAGTGCTAAGCTAGTTTGTTGTCCTTAAATTGATTGCTACTTGATATCATTTCTTGAATAGGTTTTGTTTTTTCCCCCTCCTCCTCCTCTTGAGACTTTGTCCTCTTGAGATTTTGGATACTTTTTGGATATTAGGTTTTCTCTACAGTGGTCAATGATGGAATAGTTCCATGGTTATCTCATTTATGAAACCTTTTTTCTTGATATTATAT TTTCTTTCTTTTTCTTTTTCCCTCTGGAAAGTTCGTAACACTAAACAATTTGTATAAAGTTATAAACAGAGAGATGGTGAGAGTTTTTACCAAACCTCCCATTGGTTTATCCGCTAATTTGCTTTTTTATCACTTCGCTTCAGCACTTGTTTAATGATTAAGGCGCAAAGTTCCAGTCTTTCCACTCACTCTCTCTCTCTCACGCAAGAGATTTCCGAGGAATCGATTATCCAGAAGCTTCAGATCAAACGGAGAACGGGAACTGGTCTACAATCAATCGACGCTAAATGGGATCTGGAGCGGGCAGTTTTTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGAACCACAGAAGCACGCAAACTTGCTAATGAAACCCAGCAGCAGAATCAACGATATGCATCAGTTAGAGCCATAGAAACGAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTATATTCTATGCTCACCCTCTTTGAGCTTACATTTGCAAAAAAATCGCATTTTGCTCATTTTATCATACTGTTCTCTGGTTTTCAATTTGTGAATATAAAGGCTCTCTCAAGTCTATATTATGTTCATTTTAAAGACTACCTGGCTCTGCTTGCAATGTTTTTTTACTTATCAGATGATTCAAGTATCCCTTCTGTATTTCATATTCTTTCCATTTTTGAAGTTTTCTGTCACAATCCTATAATGAAGAACTGGTTAAAAGCCACTGATGAAGTTCCAATTTTCCCCATTAAATCTTTACATAGGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTGGTCATTCCGTACTTCAGTGGTGCTGCATATGTGTATGAGCATTTCGTGAGGCCTCTATTCGTCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAACCCGACGACATCCTAACCGCTGCAGAGAAGTACATTGCAGAAAATGGGACTGAAGACCTCCAAAATATCATCAACAGGGCTGATAAGGCTCAGACAAGTAGTCGTTACATGAGCTATTCTGAGAACCACGACCACGACTACAACCACGATTACTGGAACTAGTCTATATCAAGTGTTGGGAGGGCAAGAGAAGATAATCTTTTGGCTGTCAGTTGATGTTATGTGGTGGCGTTTATTTATATGTTTTATATTTGTTCATATGAAACAGTAGGTAGGTAAGTGTAAGATATTACTTCTAAGTAGTTGGTCTAATATGATTATGGCTTCTTGAGCTTTGATGTCTTGTTTGTTCTTCCCCTCACATTTGAGTCTTTACTTCACTTGGTTGGAGAATAAAAGTGCTAAGCTAGTTTGTTGTCCTTAAATTGATTGCTACTTGATATCATTTCTTGAATAGGTTTTGTTTTTTCCCCCTCCTCCTCCTCTTGAGACTTTGTCCTCTTGAGATTTTGGATACTTTTTGGATATTAGGTTTTCTCTACAGTGGTCAATGATGGAATAGTTCCATGGTTATCTCATTTATGAAACCTTTTTTCTTGATATTATAT ATGATTAAGGCGCAAAGTTCCAGTCTTTCCACTCACTCTCTCTCTCTCACGCAAGAGATTTCCGAGGAATCGATTATCCAGAAGCTTCAGATCAAACGGAGAACGGGAACTGGTCTACAATCAATCGACGCTAAATGGGATCTGGAGCGGGCAGTTTTTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGAACCACAGAAGCACGCAAACTTGCTAATGAAACCCAGCAGCAGAATCAACGATATGCATCAGTTAGAGCCATAGAAACGAAGTCTCCTGTGGACGATCAGCAATGGCTTACTTACTGGATTCTATATTCTATGCTCACCCTCTTTGAGCTTACATTTGCAAAAAAATCGCATTTTGCTCATTTTATCATACTGTTCTCTGGTTTTCAATTTGTGAATATAAAGGCTCTCTCAAGTCTATATTATGTTCATTTTAAAGACTACCTGGCTCTGCTTGCAATGTTTTTTTACTTATCAGATGATTCAAGTATCCCTTCTGTATTTCATATTCTTTCCATTTTTGAAGTTTTCTGTCACAATCCTATAATGAAGAACTGGTTAAAAGCCACTGATGAAGTTCCAATTTTCCCCATTAAATCTTTACATAGGATCCCTATCTGGCCATATGCAAAGTTGATTTTGTCATGCTGGTTGGTCATTCCGTACTTCAGTGGTGCTGCATATGTGTATGAGCATTTCGTGAGGCCTCTATTCGTCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGACTTCTTCAGCAAACCCGACGACATCCTAACCGCTGCAGAGAAGTACATTGCAGAAAATGGGACTGAAGACCTCCAAAATATCATCAACAGGGCTGATAAGGCTCAGACAAGTAGTCGTTACATGAGCTATTCTGAGAACCACGACCACGACTACAACCACGATTACTGGAACTAG MIKAQSSSLSTHSLSLTQEISEESIIQKLQIKRRTGTGLQSIDAKWDLERAVFSRSSSKTSMFLPGTTEARKLANETQQQNQRYASVRAIETKSPVDDQQWLTYWILYSMLTLFELTFAKKSHFAHFIILFSGFQFVNIKALSSLYYVHFKDYLALLAMFFYLSDDSSIPSVFHILSIFEVFCHNPIMKNWLKATDEVPIFPIKSLHRIPIWPYAKLILSCWLVIPYFSGAAYVYEHFVRPLFVNKQTVNIWYVPKMKDFFSKPDDILTAAEKYIAENGTEDLQNIINRADKAQTSSRYMSYSENHDHDYNHDYWN Homology
BLAST of Lsi06G014740 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.5e-39 Identity = 97/231 (41.99%), Postives = 119/231 (51.52%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.2e-23 Identity = 78/236 (33.05%), Postives = 107/236 (45.34%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18 Identity = 69/224 (30.80%), Postives = 92/224 (41.07%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.5e-10 Identity = 48/157 (30.57%), Postives = 62/157 (39.49%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06 Identity = 48/160 (30.00%), Postives = 54/160 (33.75%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy TrEMBL
Match: A0A1S3BWS9 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103493983 PE=3 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65 Identity = 141/233 (60.52%), Postives = 146/233 (62.66%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy TrEMBL
Match: A0A5A7UWG1 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002450 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 9.2e-64 Identity = 141/235 (60.00%), Postives = 146/235 (62.13%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy TrEMBL
Match: A0A0A0LUH0 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G009650 PE=3 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62 Identity = 140/239 (58.58%), Postives = 146/239 (61.09%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy TrEMBL
Match: A0A6J1E1G0 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429946 PE=3 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61 Identity = 138/234 (58.97%), Postives = 143/234 (61.11%), Query Frame = 0
BLAST of Lsi06G014740 vs. ExPASy TrEMBL
Match: A0A6J1JI83 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484825 PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60 Identity = 135/233 (57.94%), Postives = 142/233 (60.94%), Query Frame = 0
BLAST of Lsi06G014740 vs. NCBI nr
Match: XP_008453193.1 (PREDICTED: HVA22-like protein a [Cucumis melo] >XP_008453194.1 PREDICTED: HVA22-like protein a [Cucumis melo]) HSP 1 Score: 258.8 bits (660), Expect = 5.9e-65 Identity = 141/233 (60.52%), Postives = 146/233 (62.66%), Query Frame = 0
BLAST of Lsi06G014740 vs. NCBI nr
Match: KAA0057935.1 (HVA22-like protein a [Cucumis melo var. makuwa] >TYJ98622.1 HVA22-like protein a [Cucumis melo var. makuwa]) HSP 1 Score: 253.8 bits (647), Expect = 1.9e-63 Identity = 141/235 (60.00%), Postives = 146/235 (62.13%), Query Frame = 0
BLAST of Lsi06G014740 vs. NCBI nr
Match: XP_004138159.1 (HVA22-like protein a [Cucumis sativus] >KGN63661.1 hypothetical protein Csa_014222 [Cucumis sativus]) HSP 1 Score: 250.0 bits (637), Expect = 2.8e-62 Identity = 140/239 (58.58%), Postives = 146/239 (61.09%), Query Frame = 0
BLAST of Lsi06G014740 vs. NCBI nr
Match: KAG6589501.1 (HVA22-like protein a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 246.5 bits (628), Expect = 3.0e-61 Identity = 138/235 (58.72%), Postives = 144/235 (61.28%), Query Frame = 0
BLAST of Lsi06G014740 vs. NCBI nr
Match: XP_022921802.1 (HVA22-like protein a [Cucurbita moschata]) HSP 1 Score: 246.5 bits (628), Expect = 3.0e-61 Identity = 138/234 (58.97%), Postives = 143/234 (61.11%), Query Frame = 0
BLAST of Lsi06G014740 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-40 Identity = 97/231 (41.99%), Postives = 119/231 (51.52%), Query Frame = 0
BLAST of Lsi06G014740 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 112.1 bits (279), Expect = 8.3e-25 Identity = 78/236 (33.05%), Postives = 107/236 (45.34%), Query Frame = 0
BLAST of Lsi06G014740 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 95.5 bits (236), Expect = 8.1e-20 Identity = 69/224 (30.80%), Postives = 92/224 (41.07%), Query Frame = 0
BLAST of Lsi06G014740 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-11 Identity = 48/157 (30.57%), Postives = 62/157 (39.49%), Query Frame = 0
BLAST of Lsi06G014740 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-07 Identity = 48/160 (30.00%), Postives = 54/160 (33.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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