Lsi06G014070 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G014070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Transcription factor TCP5
Location	chr06: 24642297 .. 24643475 (-)
RNA-Seq Expression	Lsi06G014070
Synteny	Lsi06G014070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGAAATAATTCAAAAGAAAAGGGTTGTGAAGCAAAAGAAGAAGGAATTATTAGAAGTAGTAATAATAGTGATGGAAAATATAGTTTCCCCAAGGCTCCAACAAGTTCAAGACAATGGTCAGGATTTAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACTGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATTGATTGGCTTCTTGACGTCACCAAACTCGACATCGACAACCTCCCTCCGCTCCAAATCCCCGCCGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGATCCTCATCATTATTACACTTCTTCTTCTTCTTCTTCTTCCTCTTCCCGATTTTGTAATTCGTTCCCTCCTCCTCCTCCCTTTGCGCTCGACGTAAAGGGTAGTGATGCGTATCAGACGACGACAACGGTTGAAAAAACAAAGCTTTGGGATGTGGATTTAACATTACAGGAAAAAGCAGCATCAGCGACGGCGGCAACGACGGCGGCAAAAGGGAAGTGGATTGATGGAAGTAATAATAATAGTGAAGTAGAAGATTACAATGAGCAAATTTCATCTGAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGGTAAACAATTCCACTCCTTACAATAACTACAACTCTTCTCATGATCATCATCAACCTTCTTATTTATCTCTTTCACAATTTGGGAACAACAACAACAACAATAATAATAATGGGATTTTCCCATCACAATTAGTTGAGGCTGCTCAAACAAGTACTTCATCATCTTCTAATTCTTCACTATTTTTCACTCCTTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTAATTTGTCCAATCCCTTCATGCCTTCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCAGCTCAAAGTTTCAATTTCAAGCAGCTTCTTCATGCAGCTGATCACAACAATGCCAGTGCCGGCGGTGCCGGTGCAAGCTCCTCCGCGAAGGACGGGGCGGCCGGGAACTCGTAG

mRNA sequence

ATGTTGAGAAATAATTCAAAAGAAAAGGGTTGTGAAGCAAAAGAAGAAGGAATTATTAGAAGTAGTAATAATAGTGATGGAAAATATAGTTTCCCCAAGGCTCCAACAAGTTCAAGACAATGGTCAGGATTTAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACTGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATTGATTGGCTTCTTGACGTCACCAAACTCGACATCGACAACCTCCCTCCGCTCCAAATCCCCGCCGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGATCCTCATCATTATTACACTTCTTCTTCTTCTTCTTCTTCCTCTTCCCGATTTTGTAATTCGTTCCCTCCTCCTCCTCCCTTTGCGCTCGACGTAAAGGGTAGTGATGCGTATCAGACGACGACAACGGTTGAAAAAACAAAGCTTTGGGATGTGGATTTAACATTACAGGAAAAAGCAGCATCAGCGACGGCGGCAACGACGGCGGCAAAAGGGAAGTGGATTGATGGAAGTAATAATAATAGTGAAGTAGAAGATTACAATGAGCAAATTTCATCTGAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGGTAAACAATTCCACTCCTTACAATAACTACAACTCTTCTCATGATCATCATCAACCTTCTTATTTATCTCTTTCACAATTTGGGAACAACAACAACAACAATAATAATAATGGGATTTTCCCATCACAATTAGTTGAGGCTGCTCAAACAAGTACTTCATCATCTTCTAATTCTTCACTATTTTTCACTCCTTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTAATTTGTCCAATCCCTTCATGCCTTCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCAGCTCAAAGTTTCAATTTCAAGCAGCTTCTTCATGCAGCTGATCACAACAATGCCAGTGCCGGCGGTGCCGGTGCAAGCTCCTCCGCGAAGGACGGGGCGGCCGGGAACTCGTAG

Coding sequence (CDS)

ATGTTGAGAAATAATTCAAAAGAAAAGGGTTGTGAAGCAAAAGAAGAAGGAATTATTAGAAGTAGTAATAATAGTGATGGAAAATATAGTTTCCCCAAGGCTCCAACAAGTTCAAGACAATGGTCAGGATTTAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACTGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATTGATTGGCTTCTTGACGTCACCAAACTCGACATCGACAACCTCCCTCCGCTCCAAATCCCCGCCGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGATCCTCATCATTATTACACTTCTTCTTCTTCTTCTTCTTCCTCTTCCCGATTTTGTAATTCGTTCCCTCCTCCTCCTCCCTTTGCGCTCGACGTAAAGGGTAGTGATGCGTATCAGACGACGACAACGGTTGAAAAAACAAAGCTTTGGGATGTGGATTTAACATTACAGGAAAAAGCAGCATCAGCGACGGCGGCAACGACGGCGGCAAAAGGGAAGTGGATTGATGGAAGTAATAATAATAGTGAAGTAGAAGATTACAATGAGCAAATTTCATCTGAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGGTAAACAATTCCACTCCTTACAATAACTACAACTCTTCTCATGATCATCATCAACCTTCTTATTTATCTCTTTCACAATTTGGGAACAACAACAACAACAATAATAATAATGGGATTTTCCCATCACAATTAGTTGAGGCTGCTCAAACAAGTACTTCATCATCTTCTAATTCTTCACTATTTTTCACTCCTTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCCCATGCTAATTTGTCCAATCCCTTCATGCCTTCATCTCTCCACCCTTTTGCCTCACAAAACTTGAAACCCTTTCCAGCTCAAAGTTTCAATTTCAAGCAGCTTCTTCATGCAGCTGATCACAACAATGCCAGTGCCGGCGGTGCCGGTGCAAGCTCCTCCGCGAAGGACGGGGCGGCCGGGAACTCGTAG

Protein sequence

MLRNNSKEKGCEAKEEGIIRSSNNSDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPAGFSPFHQQMLFPQYDPHHYYTSSSSSSSSSRFCNSFPPPPPFALDVKGSDAYQTTTTVEKTKLWDVDLTLQEKAASATAATTAAKGKWIDGSNNNSEVEDYNEQISSEKLLSMAICSSNLPNMVNNSTPYNNYNSSHDHHQPSYLSLSQFGNNNNNNNNNGIFPSQLVEAAQTSTSSSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMPSSLHPFASQNLKPFPAQSFNFKQLLHAADHNNASAGGAGASSSAKDGAAGNS

Homology

[Close]

BLAST of Lsi06G014070 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-40
Identity = 132/317 (41.64%), Postives = 167/317 (52.68%), Query Frame = 0


Query: 32  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 91
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 92  DKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPAGFSPFHQQMLFPQYDPHHYYTSSSSSS 151
           D+L L QPSKVIDWLL+  K D+D LPPLQ P GF+  +  ++F          S    S
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFG--------NSGFGES 155

Query: 152 SSSRFCNSFPPPPPFAL---DVKGSD---AYQTTTTVEKTKLWDVDLTLQEKAASATAAT 211
            SS    +FP      L   D+ GS    A  T TT  + + +D+D              
Sbjct: 156 PSSTTSTTFPGTNLGFLENWDLGGSSRTRARLTDTTTTQRESFDLD-------------- 215

Query: 212 TAAKGKWI-DGSNNNSEVEDYNEQISSEKLLSMAICSSNLPNMVNNSTPYNNYNSSHDHH 271
              KGKWI +  N+N + + +N     +           L N  NN++ Y  YN  H   
Sbjct: 216 ---KGKWIKNDENSNQDHQGFNTNHQQQ---------FPLTNPYNNTSAY--YNLGHLQQ 275

Query: 272 QPSYLSLSQFGNN---------NNNNNNNGIFPSQLVEAAQTSTSSSSNSSLFFTPYASY 331
                SL Q GNN          NNNNN  + P         S+S+   S LFF P    
Sbjct: 276 -----SLDQSGNNVTVAISNVAANNNNNLNLHP--------PSSSAGDGSQLFFGPTPPA 303

[Close]

BLAST of Lsi06G014070 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-32
Identity = 76/128 (59.38%), Postives = 92/128 (71.88%), Query Frame = 0


Query: 12  EAKEEGIIRSSNNSDGKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 71
           E +EE  +R+++   GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT
Sbjct: 27  EDQEETEVRATS---GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCT 86

Query: 72  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQI-PAGFS 131
           +RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID LPPL I P  FS
Sbjct: 87  LRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFS 146

Query: 132 PFHQQMLF 135
            F+    F
Sbjct: 147 IFNHHQSF 151

[Close]

BLAST of Lsi06G014070 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.2e-31
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 44  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 103
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 104 WLLDVTKLDIDNLPPLQIPAGF 126
           WLL+V K D+D LPPLQ P GF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of Lsi06G014070 vs. ExPASy Swiss-Prot
Match: Q93V43 (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.6e-16
Identity = 82/261 (31.42%), Postives = 124/261 (47.51%), Query Frame = 0


Query: 23  NNSDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 82
           NN++G     +      +W    + RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV T
Sbjct: 8   NNNNGDVVDNEVNNRLSRWH-HNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVST 67

Query: 83  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPAGFSPFHQQMLFPQYDPHHY 142
           A+Q YDLQD+L   QPSK ++WL+   +  I  LP L              FP  D +H 
Sbjct: 68  ALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPSL----------NNTHFPTDDENHQ 127

Query: 143 ---YTSSSSSSSSSRFCNSFPPPPPFALDVKGSDAYQTTT--TVEKTKLWDVDLTLQEKA 202
               T+ +++S S   C+S             SD  + ++  ++ +++L D     +E+A
Sbjct: 128 NQTLTTVAANSLSKSACSS------------NSDTSKNSSGLSLSRSELRD---KARERA 187

Query: 203 ASATAATTAAKG----KWIDGSNNNSEVEDYNEQ--ISSEKLLSMAICSSNLP------- 262
              TA  T  +      + D  N+ S+  + N Q   S+     M   SS L        
Sbjct: 188 RERTAKETKERDHNHTSFTDLLNSGSDPVNSNRQWMASAPSSSPMEYFSSGLILGSGQQT 242

Query: 263 --NMVNNSTPYNNYNSSHDHH 264
              +  NS P+++ +  H HH
Sbjct: 248 HFPISTNSHPFSSISDHHHHH 242

[Close]

BLAST of Lsi06G014070 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15
Identity = 99/306 (32.35%), Postives = 136/306 (44.44%), Query Frame = 0


Query: 39  RQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQP 98
           R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L   QP
Sbjct: 32  RNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 91

Query: 99  SKVIDWLLDVTKLDIDNLPPLQIPAGFSPFHQQMLFPQYDPHHYYTSSSSSSSSSRFCNS 158
           SK ++WL++     I +LP L              F   D +   T S+ SS +S   +S
Sbjct: 92  SKAVEWLINAASDSITDLPLLNTN-----------FDHLDQNQNQTKSACSSGTSE--SS 151

Query: 159 FPPPPPFALDVKGSDAYQTTTTVEKTKLWDVDLTLQEKAASATAATTA------AKGKWI 218
                   +  K  +  +  T  ++      D  LQ   +S T   T       +   W 
Sbjct: 152 LLSLSRTEIRGKARERARERTAKDR------DKDLQNAHSSFTQLLTGGFDQQPSNRNWT 211

Query: 219 DGSN----------NNSEVEDYNEQISSEKLLSMAICSSNLPNMVNNSTPYNNYNSSHDH 278
            GS+          N+S  E  N   S     +  I SS        S+  N   SS   
Sbjct: 212 GGSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSS--------SSAINGGYSSRGT 271

Query: 279 HQPSYLSLSQFGNNNNNNNNNGIFPSQLVEAAQTSTSSSSNSSLFFTPYASYITN--PFE 327
            Q +  S S F NNNNN          + + +  S+SSSS+S +     + ++    P +
Sbjct: 272 LQSN--SQSLFLNNNNN----------ITQRSSISSSSSSSSPMDSQSISFFMATPPPLD 297

[Close]

BLAST of Lsi06G014070 vs. ExPASy TrEMBL
Match: A0A1S3BX07 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 3.2e-167
Identity = 345/412 (83.74%), Postives = 359/412 (87.14%), Query Frame = 0


Query: 1   MLRN-NSK-EKGCEAKEEGI-IR--SSNNSDGKYSFPKAPT-SSRQWSGFRNPRIVRVSR 60
           MLRN NSK +KG EAKEEGI IR  SSNN+DGKYSFPKAPT SSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 NLPPLQIPAGFSPFHQQMLFPQY-DPHHYYTSSSSSSSSSRFCNSFPPPPPFALDVKGSD 180
           NLPPLQIP GFSPFHQQMLFPQY DPHH+Y +SSSSSSSSRFCNS   PPPF LDVK +D
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNS--QPPPFMLDVKSTD 188

Query: 181 AYQTTTTVEKTKLWDVDL-TLQEKAASATAATTAAKGKWIDGSNNNS----EVEDYNEQI 240
           AYQTT TVEKTKLWD+DL  L EKA SAT A T  KGKWIDGSNN+S    +VEDYNEQI
Sbjct: 189 AYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQI 248

Query: 241 SSEKLLSMAICSSNLPNMV--NNSTPYNNYNSSHDHH----QPSYLSLSQFGNNNNNNNN 300
           SS+KLLSMAICSSNLPNM+  NNSTPYNNYNSSHDHH    QPS LSLSQFG   NNNN+
Sbjct: 249 SSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFG---NNNNS 308

Query: 301 NGIFPSQLVEAAQTST-SSSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMPS 360
           NGIFPSQLVEAAQ ST SSSS+SSLFFTPYASYITNPFESHIHFLSSNSHA  +NPFM S
Sbjct: 309 NGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 368

Query: 361 SLHPFA-SQNLKPFPAQSFNFKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           SLHPFA SQNLKPFP  SFN KQL HAAD NN + G AGA SSAKDGAAGNS
Sbjct: 369 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 415

[Close]

BLAST of Lsi06G014070 vs. ExPASy TrEMBL
Match: A0A5A7UWW8 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003030 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 3.2e-167
Identity = 345/412 (83.74%), Postives = 359/412 (87.14%), Query Frame = 0


Query: 1   MLRN-NSK-EKGCEAKEEGI-IR--SSNNSDGKYSFPKAPT-SSRQWSGFRNPRIVRVSR 60
           MLRN NSK +KG EAKEEGI IR  SSNN+DGKYSFPKAPT SSRQWSGFRNPRIVRVSR
Sbjct: 1   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120

Query: 121 NLPPLQIPAGFSPFHQQMLFPQY-DPHHYYTSSSSSSSSSRFCNSFPPPPPFALDVKGSD 180
           NLPPLQIP GFSPFHQQMLFPQY DPHH+Y +SSSSSSSSRFCNS   PPPF LDVK +D
Sbjct: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNS--QPPPFMLDVKSTD 180

Query: 181 AYQTTTTVEKTKLWDVDL-TLQEKAASATAATTAAKGKWIDGSNNNS----EVEDYNEQI 240
           AYQTT TVEKTKLWD+DL  L EKA SAT A T  KGKWIDGSNN+S    +VEDYNEQI
Sbjct: 181 AYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQI 240

Query: 241 SSEKLLSMAICSSNLPNMV--NNSTPYNNYNSSHDHH----QPSYLSLSQFGNNNNNNNN 300
           SS+KLLSMAICSSNLPNM+  NNSTPYNNYNSSHDHH    QPS LSLSQFG   NNNN+
Sbjct: 241 SSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFG---NNNNS 300

Query: 301 NGIFPSQLVEAAQTST-SSSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMPS 360
           NGIFPSQLVEAAQ ST SSSS+SSLFFTPYASYITNPFESHIHFLSSNSHA  +NPFM S
Sbjct: 301 NGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 360

Query: 361 SLHPFA-SQNLKPFPAQSFNFKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           SLHPFA SQNLKPFP  SFN KQL HAAD NN + G AGA SSAKDGAAGNS
Sbjct: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 407

[Close]

BLAST of Lsi06G014070 vs. ExPASy TrEMBL
Match: A0A0A0LRU6 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 9.4e-167
Identity = 343/415 (82.65%), Postives = 361/415 (86.99%), Query Frame = 0


Query: 1   MLRNNSK-EKGCEAKEEGII---RSSNNSDGKYSFPKAPT-SSRQWSGFRNPRIVRVSRS 60
           MLRNNSK +KGCEAKEEG++    S+NN+DGKYSFPKAPT SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPAGFSPFHQQMLFPQY-DPHHYY-----TSSSSSSSSSRFCNSFPPPPPFALDV 180
           LPPLQIP GFSPFHQQMLFPQY DPHH+Y     +SSSSSSSSSRFCNS   PPPF LDV
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSL--PPPFMLDV 180

Query: 181 KGSDAYQTTTTVEKTKLWDVDL-TLQEKAASATAATTAAKGKWIDGSNNNS----EVEDY 240
           K +DAYQTT TVEKTKLWD+DL  LQ+KA SAT A T  KGKWIDGSNN+S    +VEDY
Sbjct: 181 KSTDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDY 240

Query: 241 NEQISSEKLLSMAICSSNLPNMV--NNSTPYNNYNSSHDHH---QPSYLSLSQFGNNNNN 300
           NEQISS+KLLSMAICSSNLPNM+  NNSTPYNNYNSSHDH+   QPS LSLSQFG   NN
Sbjct: 241 NEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFG---NN 300

Query: 301 NNNNGIFPSQLVE-AAQTSTSSSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPF 360
           NN+NG+FPSQLVE AAQ S SSSS+SSLFFTPYASYITNPFESHIHFLSSNSHA LSNPF
Sbjct: 301 NNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHA-LSNPF 360

Query: 361 MPSSLHPFA-SQNLKPFPAQSFNFKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           M SSLHPFA SQNLKPFP  SFN KQL HAAD NNA  G AGA SSAKDGAAGNS
Sbjct: 361 MSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNA-GGSAGAGSSAKDGAAGNS 408

[Close]

BLAST of Lsi06G014070 vs. ExPASy TrEMBL
Match: A0A6J1E797 (transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 2.5e-119
Identity = 265/393 (67.43%), Postives = 284/393 (72.26%), Query Frame = 0


Query: 1   MLRNNSKEKGCEAKEEGIIRSSNNSDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKD 60
           MLR NSKEKG E+KEE          GKY FPKAPTSSRQWSGFRNPRIVRVSRSFGGKD
Sbjct: 1   MLR-NSKEKGFESKEE----------GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKD 60

Query: 61  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQ 120
           RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDID LPPLQ
Sbjct: 61  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQ 120

Query: 121 IPAGFSPFHQQMLFPQYDPHHYY-TSSSSSSSSSRFCNSFPPPPPFALDVKGSDAYQTTT 180
           IP GFSPFHQQMLFP YD HH+Y +SSSSSSSSS+FCNS   PPPFA+D+KG        
Sbjct: 121 IPTGFSPFHQQMLFPPYDHHHHYSSSSSSSSSSSQFCNSL--PPPFAVDMKGD------- 180

Query: 181 TVEKTKLWDVDLTLQEKAASATAATTAAKGKWIDGSNNNSEVEDYNEQISSEKLLSMAIC 240
           ++EKTK+WD+DL LQ KA+S T      KGKWIDGS +N  VEDY               
Sbjct: 181 SIEKTKIWDMDLALQGKASSLT------KGKWIDGS-SNQHVEDY--------------- 240

Query: 241 SSNLPNMVNNSTPYNNYNSSHDHHQPSYLSLSQFGNNNNNNNNNGIFPSQLVEAAQTSTS 300
                    N TPYN YNS            SQFG      NNNG+FPSQ+    +  TS
Sbjct: 241 ---------NFTPYNTYNS------------SQFG------NNNGVFPSQI----EAPTS 300

Query: 301 SSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMPSSLHPFASQNLKPFPAQSF 360
           SSS S+LFFTPYASYITNPFESHIHFLSSNSHA LSNPF+PS+LHPFASQNLKPF A SF
Sbjct: 301 SSSASALFFTPYASYITNPFESHIHFLSSNSHA-LSNPFVPSALHPFASQNLKPFSAASF 312

Query: 361 NFKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           NFKQLLHAAD       G G   S KDG AG+S
Sbjct: 361 NFKQLLHAAD-------GNGTDRSNKDGTAGDS 312

[Close]

BLAST of Lsi06G014070 vs. ExPASy TrEMBL
Match: A0A6J1JE53 (transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.1e-117
Identity = 263/392 (67.09%), Postives = 283/392 (72.19%), Query Frame = 0


Query: 1   MLRNNSKEKGCEAKEEGIIRSSNNSDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKD 60
           MLR NSKEKG E+KEE          GKY FPKAPTSS QWSGFRNPRIVRVSRSFGGKD
Sbjct: 1   MLR-NSKEKGFESKEE----------GKYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKD 60

Query: 61  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQ 120
           RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPPLQ
Sbjct: 61  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQ 120

Query: 121 IPAGFSPFHQQMLFPQYDPHHYYTSSSSSSSSSRFCNSFPPPPPFALDVKGSDAYQTTTT 180
           IP GFSPFHQQM FP YD  H++    SSSSSS+FCNS   PPPFA++VKG     ++T 
Sbjct: 121 IPTGFSPFHQQMFFPPYDDQHHH-HHHSSSSSSQFCNSL--PPPFAVNVKGD---SSSTA 180

Query: 181 VEKTKLWDVDLTLQEKAASATAATTAAKGKWIDGSNNNSEVEDYNEQISSEKLLSMAICS 240
           VEKTK+WD+DL LQ KA+S T      KGKWIDGS +N  VEDY                
Sbjct: 181 VEKTKIWDMDLALQGKASSLT------KGKWIDGS-SNQHVEDY---------------- 240

Query: 241 SNLPNMVNNSTPYNNYNSSHDHHQPSYLSLSQFGNNNNNNNNNGIFPSQLVEAAQTSTSS 300
                   N TPYN+YNS            SQFG      NNNG+FPSQ+    +  TSS
Sbjct: 241 --------NFTPYNSYNS------------SQFG------NNNGVFPSQI----EAPTSS 300

Query: 301 SSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMPSSLHPFASQNLKPFPAQSFN 360
           SS S+LFFTPYASYITNPFESHIHFLSSNSHA LSNPF+PS+LHPFASQNLKPF A SFN
Sbjct: 301 SSASALFFTPYASYITNPFESHIHFLSSNSHA-LSNPFVPSALHPFASQNLKPFSAASFN 314

Query: 361 FKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           FKQLLHAAD       G GA  S KDGAAG+S
Sbjct: 361 FKQLLHAAD-------GNGADRSNKDGAAGDS 314

[Close]

BLAST of Lsi06G014070 vs. NCBI nr
Match: KAA0057999.1 (transcription factor TCP5 [Cucumis melo var. makuwa])

HSP 1 Score: 597.8 bits (1540), Expect = 6.7e-167
Identity = 345/412 (83.74%), Postives = 359/412 (87.14%), Query Frame = 0


Query: 1   MLRN-NSK-EKGCEAKEEGI-IR--SSNNSDGKYSFPKAPT-SSRQWSGFRNPRIVRVSR 60
           MLRN NSK +KG EAKEEGI IR  SSNN+DGKYSFPKAPT SSRQWSGFRNPRIVRVSR
Sbjct: 1   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120

Query: 121 NLPPLQIPAGFSPFHQQMLFPQY-DPHHYYTSSSSSSSSSRFCNSFPPPPPFALDVKGSD 180
           NLPPLQIP GFSPFHQQMLFPQY DPHH+Y +SSSSSSSSRFCNS   PPPF LDVK +D
Sbjct: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNS--QPPPFMLDVKSTD 180

Query: 181 AYQTTTTVEKTKLWDVDL-TLQEKAASATAATTAAKGKWIDGSNNNS----EVEDYNEQI 240
           AYQTT TVEKTKLWD+DL  L EKA SAT A T  KGKWIDGSNN+S    +VEDYNEQI
Sbjct: 181 AYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQI 240

Query: 241 SSEKLLSMAICSSNLPNMV--NNSTPYNNYNSSHDHH----QPSYLSLSQFGNNNNNNNN 300
           SS+KLLSMAICSSNLPNM+  NNSTPYNNYNSSHDHH    QPS LSLSQFG   NNNN+
Sbjct: 241 SSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFG---NNNNS 300

Query: 301 NGIFPSQLVEAAQTST-SSSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMPS 360
           NGIFPSQLVEAAQ ST SSSS+SSLFFTPYASYITNPFESHIHFLSSNSHA  +NPFM S
Sbjct: 301 NGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 360

Query: 361 SLHPFA-SQNLKPFPAQSFNFKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           SLHPFA SQNLKPFP  SFN KQL HAAD NN + G AGA SSAKDGAAGNS
Sbjct: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 407

[Close]

BLAST of Lsi06G014070 vs. NCBI nr
Match: XP_008453284.1 (PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: transcription factor TCP5 [Cucumis melo])

HSP 1 Score: 597.8 bits (1540), Expect = 6.7e-167
Identity = 345/412 (83.74%), Postives = 359/412 (87.14%), Query Frame = 0


Query: 1   MLRN-NSK-EKGCEAKEEGI-IR--SSNNSDGKYSFPKAPT-SSRQWSGFRNPRIVRVSR 60
           MLRN NSK +KG EAKEEGI IR  SSNN+DGKYSFPKAPT SSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 NLPPLQIPAGFSPFHQQMLFPQY-DPHHYYTSSSSSSSSSRFCNSFPPPPPFALDVKGSD 180
           NLPPLQIP GFSPFHQQMLFPQY DPHH+Y +SSSSSSSSRFCNS   PPPF LDVK +D
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNS--QPPPFMLDVKSTD 188

Query: 181 AYQTTTTVEKTKLWDVDL-TLQEKAASATAATTAAKGKWIDGSNNNS----EVEDYNEQI 240
           AYQTT TVEKTKLWD+DL  L EKA SAT A T  KGKWIDGSNN+S    +VEDYNEQI
Sbjct: 189 AYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQI 248

Query: 241 SSEKLLSMAICSSNLPNMV--NNSTPYNNYNSSHDHH----QPSYLSLSQFGNNNNNNNN 300
           SS+KLLSMAICSSNLPNM+  NNSTPYNNYNSSHDHH    QPS LSLSQFG   NNNN+
Sbjct: 249 SSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFG---NNNNS 308

Query: 301 NGIFPSQLVEAAQTST-SSSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMPS 360
           NGIFPSQLVEAAQ ST SSSS+SSLFFTPYASYITNPFESHIHFLSSNSHA  +NPFM S
Sbjct: 309 NGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 368

Query: 361 SLHPFA-SQNLKPFPAQSFNFKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           SLHPFA SQNLKPFP  SFN KQL HAAD NN + G AGA SSAKDGAAGNS
Sbjct: 369 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 415

[Close]

BLAST of Lsi06G014070 vs. NCBI nr
Match: XP_011648477.1 (transcription factor TCP5 [Cucumis sativus] >KGN63734.1 hypothetical protein Csa_014083 [Cucumis sativus])

HSP 1 Score: 596.3 bits (1536), Expect = 1.9e-166
Identity = 343/415 (82.65%), Postives = 361/415 (86.99%), Query Frame = 0


Query: 1   MLRNNSK-EKGCEAKEEGII---RSSNNSDGKYSFPKAPT-SSRQWSGFRNPRIVRVSRS 60
           MLRNNSK +KGCEAKEEG++    S+NN+DGKYSFPKAPT SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPAGFSPFHQQMLFPQY-DPHHYY-----TSSSSSSSSSRFCNSFPPPPPFALDV 180
           LPPLQIP GFSPFHQQMLFPQY DPHH+Y     +SSSSSSSSSRFCNS   PPPF LDV
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSL--PPPFMLDV 180

Query: 181 KGSDAYQTTTTVEKTKLWDVDL-TLQEKAASATAATTAAKGKWIDGSNNNS----EVEDY 240
           K +DAYQTT TVEKTKLWD+DL  LQ+KA SAT A T  KGKWIDGSNN+S    +VEDY
Sbjct: 181 KSTDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDY 240

Query: 241 NEQISSEKLLSMAICSSNLPNMV--NNSTPYNNYNSSHDHH---QPSYLSLSQFGNNNNN 300
           NEQISS+KLLSMAICSSNLPNM+  NNSTPYNNYNSSHDH+   QPS LSLSQFG   NN
Sbjct: 241 NEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFG---NN 300

Query: 301 NNNNGIFPSQLVE-AAQTSTSSSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPF 360
           NN+NG+FPSQLVE AAQ S SSSS+SSLFFTPYASYITNPFESHIHFLSSNSHA LSNPF
Sbjct: 301 NNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHA-LSNPF 360

Query: 361 MPSSLHPFA-SQNLKPFPAQSFNFKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           M SSLHPFA SQNLKPFP  SFN KQL HAAD NNA  G AGA SSAKDGAAGNS
Sbjct: 361 MSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNA-GGSAGAGSSAKDGAAGNS 408

[Close]

BLAST of Lsi06G014070 vs. NCBI nr
Match: XP_038879592.1 (transcription factor TCP5-like [Benincasa hispida])

HSP 1 Score: 595.9 bits (1535), Expect = 2.5e-166
Identity = 341/402 (84.83%), Postives = 351/402 (87.31%), Query Frame = 0


Query: 1   MLRNN-SKEKGCEAKEEGIIRSSNNSDGKYSFPK-APTSSRQWSGFRNPRIVRVSRSFGG 60
           MLRNN SKEKGCEAKEEGI  S+NN DGKYSF K A TSSRQWSGFRNPRIVRVSRSFGG
Sbjct: 1   MLRNNSSKEKGCEAKEEGIRSSNNNDDGKYSFSKAASTSSRQWSGFRNPRIVRVSRSFGG 60

Query: 61  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPP 120
           KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPP
Sbjct: 61  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPP 120

Query: 121 LQIPAGFSPFHQQMLFPQYDPHHYYTSSSSSSSSSRFCNSFPPPPP---FALDVKGSDAY 180
           LQIP GFSPFHQQMLFPQYDPHH+Y   S+SSSSSR CNS PPPPP   FALDVKG DAY
Sbjct: 121 LQIPPGFSPFHQQMLFPQYDPHHHY--YSTSSSSSRLCNSLPPPPPPPSFALDVKGIDAY 180

Query: 181 QTTTTVEKTKLWDVDLTLQEKAASATAATTAAKGKWIDGSN--NNSEVEDYNEQISSEKL 240
           QTT TVEKTKLWDVDL LQEKAA+AT ATT  KGKWIDGSN  N+ +VEDYNEQISS+KL
Sbjct: 181 QTTMTVEKTKLWDVDLGLQEKAAAATTATT--KGKWIDGSNTTNSQQVEDYNEQISSQKL 240

Query: 241 LSMAICSSNLPNMV-NNSTPYNNYNSSHDHHQPSYLSLSQFGNNNNNNNNNGIFPSQLVE 300
           LSMAICSSNLPNM+ NNSTPYNNYNS         LSLSQFGNNNN++N N  FPSQLVE
Sbjct: 241 LSMAICSSNLPNMMNNNSTPYNNYNSC--------LSLSQFGNNNNDDNGN--FPSQLVE 300

Query: 301 -AAQTSTSSSSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMP-SSLHPFASQN 360
            AAQTSTSSSSNSSLFFTPYASYITNPFESHIHFLSSNSH NLSNPFMP SSLHPFASQN
Sbjct: 301 AAAQTSTSSSSNSSLFFTPYASYITNPFESHIHFLSSNSHVNLSNPFMPNSSLHPFASQN 360

Query: 361 LKPFPAQSFNFKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           LKPFP  SFN KQLLHAAD NN     AGASSSAKDGAA NS
Sbjct: 361 LKPFPPPSFNLKQLLHAAD-NNPGGSRAGASSSAKDGAAENS 387

[Close]

BLAST of Lsi06G014070 vs. NCBI nr
Match: KAG6589600.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 448.4 bits (1152), Expect = 6.5e-122
Identity = 267/392 (68.11%), Postives = 286/392 (72.96%), Query Frame = 0


Query: 1   MLRNNSKEKGCEAKEEGIIRSSNNSDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKD 60
           MLR NSKEKG E+KEE          GKY FPKAPTSSRQWSGFRNPRIVRVSRSFGGKD
Sbjct: 1   MLR-NSKEKGFESKEE----------GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKD 60

Query: 61  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQ 120
           RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPPLQ
Sbjct: 61  RHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQ 120

Query: 121 IPAGFSPFHQQMLFPQYDPHHYYTSSSSSSSSSRFCNSFPPPPPFALDVKGSDAYQTTTT 180
           IP GFSPFHQQMLFP YD HH+Y+SSSSSSSSS+FCNS   PPPFA+D+KG        +
Sbjct: 121 IPTGFSPFHQQMLFPPYDHHHHYSSSSSSSSSSQFCNSL--PPPFAVDMKGD-------S 180

Query: 181 VEKTKLWDVDLTLQEKAASATAATTAAKGKWIDGSNNNSEVEDYNEQISSEKLLSMAICS 240
           +EKTK+WD+DL LQ KA+S T      KGKWIDGS +N  VEDY                
Sbjct: 181 IEKTKIWDMDLALQGKASSLT------KGKWIDGS-SNQHVEDY---------------- 240

Query: 241 SNLPNMVNNSTPYNNYNSSHDHHQPSYLSLSQFGNNNNNNNNNGIFPSQLVEAAQTSTSS 300
                   N TPYN YNS            SQFG      NNNG+FPSQ+    +  TSS
Sbjct: 241 --------NFTPYNTYNS------------SQFG------NNNGVFPSQI----EAPTSS 300

Query: 301 SSNSSLFFTPYASYITNPFESHIHFLSSNSHANLSNPFMPSSLHPFASQNLKPFPAQSFN 360
           SS S+LFFTPYASYITNPFESHIHFLSSNSHA LSNPF+PS+LHPFASQNLKPF A SFN
Sbjct: 301 SSASALFFTPYASYITNPFESHIHFLSSNSHA-LSNPFVPSALHPFASQNLKPFSAASFN 311

Query: 361 FKQLLHAADHNNASAGGAGASSSAKDGAAGNS 393
           FKQLLHAAD N       GA  S KDG AG+S
Sbjct: 361 FKQLLHAADAN-------GADPSNKDGTAGDS 311

[Close]

BLAST of Lsi06G014070 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 169.1 bits (427), Expect = 7.1e-42
Identity = 132/317 (41.64%), Postives = 167/317 (52.68%), Query Frame = 0


Query: 32  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 91
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 92  DKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPAGFSPFHQQMLFPQYDPHHYYTSSSSSS 151
           D+L L QPSKVIDWLL+  K D+D LPPLQ P GF+  +  ++F          S    S
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFG--------NSGFGES 155

Query: 152 SSSRFCNSFPPPPPFAL---DVKGSD---AYQTTTTVEKTKLWDVDLTLQEKAASATAAT 211
            SS    +FP      L   D+ GS    A  T TT  + + +D+D              
Sbjct: 156 PSSTTSTTFPGTNLGFLENWDLGGSSRTRARLTDTTTTQRESFDLD-------------- 215

Query: 212 TAAKGKWI-DGSNNNSEVEDYNEQISSEKLLSMAICSSNLPNMVNNSTPYNNYNSSHDHH 271
              KGKWI +  N+N + + +N     +           L N  NN++ Y  YN  H   
Sbjct: 216 ---KGKWIKNDENSNQDHQGFNTNHQQQ---------FPLTNPYNNTSAY--YNLGHLQQ 275

Query: 272 QPSYLSLSQFGNN---------NNNNNNNGIFPSQLVEAAQTSTSSSSNSSLFFTPYASY 331
                SL Q GNN          NNNNN  + P         S+S+   S LFF P    
Sbjct: 276 -----SLDQSGNNVTVAISNVAANNNNNLNLHP--------PSSSAGDGSQLFFGPTPPA 303

[Close]

BLAST of Lsi06G014070 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-33
Identity = 76/128 (59.38%), Postives = 92/128 (71.88%), Query Frame = 0


Query: 12  EAKEEGIIRSSNNSDGKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 71
           E +EE  +R+++   GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT
Sbjct: 27  EDQEETEVRATS---GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCT 86

Query: 72  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQI-PAGFS 131
           +RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID LPPL I P  FS
Sbjct: 87  LRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFS 146

Query: 132 PFHQQMLF 135
            F+    F
Sbjct: 147 IFNHHQSF 151

[Close]

BLAST of Lsi06G014070 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-33
Identity = 76/128 (59.38%), Postives = 92/128 (71.88%), Query Frame = 0


Query: 12  EAKEEGIIRSSNNSDGKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 71
           E +EE  +R+++   GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT
Sbjct: 27  EDQEETEVRATS---GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCT 86

Query: 72  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQI-PAGFS 131
           +RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID LPPL I P  FS
Sbjct: 87  LRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFS 146

Query: 132 PFHQQMLF 135
            F+    F
Sbjct: 147 IFNHHQSF 151

[Close]

BLAST of Lsi06G014070 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 137.1 bits (344), Expect = 3.0e-32
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 44  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 103
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 104 WLLDVTKLDIDNLPPLQIPAGF 126
           WLL+V K D+D LPPLQ P GF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of Lsi06G014070 vs. TAIR 10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 )

HSP 1 Score: 86.7 bits (213), Expect = 4.7e-17
Identity = 82/261 (31.42%), Postives = 124/261 (47.51%), Query Frame = 0


Query: 23  NNSDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 82
           NN++G     +      +W    + RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV T
Sbjct: 8   NNNNGDVVDNEVNNRLSRWH-HNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVST 67

Query: 83  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPAGFSPFHQQMLFPQYDPHHY 142
           A+Q YDLQD+L   QPSK ++WL+   +  I  LP L              FP  D +H 
Sbjct: 68  ALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPSL----------NNTHFPTDDENHQ 127

Query: 143 ---YTSSSSSSSSSRFCNSFPPPPPFALDVKGSDAYQTTT--TVEKTKLWDVDLTLQEKA 202
               T+ +++S S   C+S             SD  + ++  ++ +++L D     +E+A
Sbjct: 128 NQTLTTVAANSLSKSACSS------------NSDTSKNSSGLSLSRSELRD---KARERA 187

Query: 203 ASATAATTAAKG----KWIDGSNNNSEVEDYNEQ--ISSEKLLSMAICSSNLP------- 262
              TA  T  +      + D  N+ S+  + N Q   S+     M   SS L        
Sbjct: 188 RERTAKETKERDHNHTSFTDLLNSGSDPVNSNRQWMASAPSSSPMEYFSSGLILGSGQQT 242

Query: 263 --NMVNNSTPYNNYNSSHDHH 264
              +  NS P+++ +  H HH
Sbjct: 248 HFPISTNSHPFSSISDHHHHH 242

The following BLAST results are available for this feature:

BLAST of Lsi06G014070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	1.0e-40	41.64	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9S7W5	2.2e-32	59.38	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9LEZ9	4.2e-31	79.27	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q93V43	6.6e-16	31.42	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]
Q9C758	1.1e-15	32.35	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]

BLAST of Lsi06G014070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BX07	3.2e-167	83.74	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]
A0A5A7UWW8	3.2e-167	83.74	Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0LRU6	9.4e-167	82.65	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV...	[more]
A0A6J1E797	2.5e-119	67.43	transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JE53	1.1e-117	67.09	transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 ...	[more]

BLAST of Lsi06G014070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057999.1	6.7e-167	83.74	transcription factor TCP5 [Cucumis melo var. makuwa]	[more]
XP_008453284.1	6.7e-167	83.74	PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: t...	[more]
XP_011648477.1	1.9e-166	82.65	transcription factor TCP5 [Cucumis sativus] >KGN63734.1 hypothetical protein Csa...	[more]
XP_038879592.1	2.5e-166	84.83	transcription factor TCP5-like [Benincasa hispida]	[more]
KAG6589600.1	6.5e-122	68.11	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi06G014070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	7.1e-42	41.64	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.1	1.6e-33	59.38	plastid transcription factor 1	[more]
AT3G02150.2	1.6e-33	59.38	plastid transcription factor 1	[more]
AT5G08070.1	3.0e-32	79.27	TCP domain protein 17	[more]
AT4G18390.1	4.7e-17	31.42	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 58..194 e-value: 2.6E-23 score: 83.3
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 58..116 score: 26.103212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31072:SF168	TRANSCRIPTION FACTOR TCP5	coord: 3..390
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 3..390

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G014070.1	Lsi06G014070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding